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8ba65a15e12bba077d3b7e2c4e4d7ede3e2a7018
Make hidden methods actually hidden
file_distributor/pcloud_upload.py
file_distributor/pcloud_upload.py
#!/usr/bin/env python3 import configparser import hashlib import requests import sys import time config_filename = "file_distributor.cfg" # Change this to True to enable output debug logging for this module. print_debug_logs = True class Logger: @staticmethod def __log(log_level, message): if print_...
Python
0.000001
@@ -975,16 +975,17 @@ def +_ _api_cal @@ -1043,16 +1043,16 @@ d=None,%0A - @@ -2456,16 +2456,17 @@ def +_ _get_dig @@ -2498,32 +2498,33 @@ se_body = self._ +_ api_call(%0A @@ -2919,16 +2919,17 @@ = self._ +_ get_dige @@ -3296,24 +3296,25 @@ ody = self._ +_ api_call(%0A @@ -4065,32...
cde3547d7492049a40858a02b85b054accc6da61
save image to temp file
background_changer/setbackground.py
background_changer/setbackground.py
#! /usr/bin/python import ctypes import os from os.path import expanduser import platform import subprocess import sys import time from threading import Thread import urllib image_url = "http://lorempixel.com/1920/1080/"; dest_path = expanduser("~") + "/image.jpg" PLATFORM_LINUX = "Linux" PLATFORM_OSX = "Darwin" PL...
Python
0
@@ -113,16 +113,32 @@ ort sys%0A +import tempfile%0A import t @@ -237,51 +237,8 @@ 0/%22; -%0Adest_path = expanduser(%22~%22) + %22/image.jpg%22 %0A%0APL @@ -1451,16 +1451,69 @@ ound():%0A + (fd, filename) = tempfile.mkstemp()%0A try:%0A down @@ -1528,27 +1528,30 @@ ge_url, -dest_path)%0A +filenam...
17d88fa2d3b7185a1cb9a6c43a1f1d6d45e8fec0
change diffios.open to builtins.open
tests/DiffiosConfig_test.py
tests/DiffiosConfig_test.py
#!/usr/bin/env python3 # -*- coding: utf-8 -*- import os import sys try: from unittest import mock except ImportError: from mock import mock import pytest THIS_DIR = os.path.dirname(__file__) sys.path.append(os.path.abspath(".")) from diffios import DiffiosConfig def test_raises_error_if_config_not_given()...
Python
0.000002
@@ -2490,22 +2490,23 @@ .patch(' -diffio +builtin s.open', @@ -2521,21 +2521,8 @@ data -, create=True ) as
38e80cab7cda7a9b56523e244aa0f94be041d0bf
Version bump to v3.0.9
geomdl/__init__.py
geomdl/__init__.py
""" NURBS-Python Main Component .. moduleauthor:: Onur Rauf Bingol <orbingol@gmail.com> """ __version__ = "3.0.8"
Python
0
@@ -111,7 +111,7 @@ 3.0. -8 +9 %22%0A
1d65c0de318426551ffdcda691e90aee67075ee0
fix Signal instances as selector on mux
hwtHls/allocator/allocator.py
hwtHls/allocator/allocator.py
from typing import Union from hwt.hdl.operatorDefs import AllOps from hwt.pyUtils.arrayQuery import grouper from hwt.synthesizer.interfaceLevel.unitImplHelpers import getSignalName from hwt.synthesizer.rtlLevel.rtlSignal import RtlSignal from hwtHls.codeOps import HlsRead, HlsOperation, HlsWrite,\ HlsConst from hw...
Python
0.000001
@@ -389,16 +389,83 @@ epsilon%0A +from hwt.synthesizer.interfaceLevel.mainBases import InterfaceBase%0A %0A%0Aclass @@ -4073,16 +4073,113 @@ s(src)%0A + if isinstance(cond, InterfaceBase):%0A cond = cond._sig%0A
9b85f61afa8ac10fb122df1814043e413e70d0ea
Deal with non-ascii filenames in import completion.
bpython/importcompletion.py
bpython/importcompletion.py
# The MIT License # # Copyright (c) 2009-2010 Andreas Stuehrk # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, mo...
Python
0
@@ -1147,16 +1147,53 @@ rt sys%0A%0A +py3 = sys.version_info%5B:2%5D %3E= (3, 0)%0A %0A# The c @@ -3949,32 +3949,188 @@ continue%0A + except UnicodeEncodeError:%0A # Happens with Python 3 when there is a filename in some%0A # invalid encoding%0A continue%0A els...
7bdc81f8fc1fd069c81eea622ae4f9bc31dcb8d5
Remove long flag
EasyEuler/commands/list.py
EasyEuler/commands/list.py
import click from EasyEuler import data @click.command() @click.option('--long', '-l', is_flag=True, help='Include problem descriptions.') @click.option('--sort', '-s', type=click.Choice(['id', 'difficulty']), default='id', help='Sort the list by problem attribute.') def cli(long, sort): ...
Python
0.000027
@@ -57,104 +57,8 @@ d()%0A -@click.option('--long', '-l', is_flag=True,%0A help='Include problem descriptions.')%0A @cli @@ -124,16 +124,16 @@ lty'%5D),%0A + @@ -208,14 +208,8 @@ cli( -long, sort @@ -369,17 +369,20 @@ lem_ -string = +list.append( 'Pro @@ -421,281 +421,8 @@ lem) -%0A%0A ...
6ac82f66fc7ba1a8886955db9edb335fbf0187b1
Change exception for unrecognized element
tests/drivers/test-union.py
tests/drivers/test-union.py
import pyxb.binding.generate import pyxb.utils.domutils from xml.dom import Node import os.path schema_path = '%s/../schemas/test-union.xsd' % (os.path.dirname(__file__),) code = pyxb.binding.generate.GeneratePython(schema_file=schema_path) rv = compile(code, 'test', 'exec') eval(rv) from pyxb.exceptions_ import * ...
Python
0.000001
@@ -2257,13 +2257,20 @@ ses( -NotAn +Unrecognized Elem
ff9b6bdd3f3fdf5491590a9f54bf89f2d7d642fe
use match year in query
helpers/data_fetchers/team_details_data_fetcher.py
helpers/data_fetchers/team_details_data_fetcher.py
import datetime from google.appengine.ext import ndb from models.award import Award from models.event_team import EventTeam from models.match import Match class TeamDetailsDataFetcher(object): @classmethod def fetch(self, team, year, return_valid_years=False): """ returns: events_sorted, ...
Python
0.000249
@@ -455,36 +455,24 @@ get_events_ -and_matches_ async():%0A @@ -1338,25 +1338,16 @@ events -, matches = yield @@ -1382,39 +1382,8 @@ eys) -, get_matches_async(event_keys) %0A @@ -1408,33 +1408,22 @@ .Return( -( events -, matches) )%0A%0A @@ -1472,91 +1472,11 @@ ync( -event_keys ):%0A - ...
bc2ba8e1c8c988ae24f6961ce64187782f5ba32d
Add missing type declaration to AsusWrt Scanner Entity (#69773)
homeassistant/components/asuswrt/device_tracker.py
homeassistant/components/asuswrt/device_tracker.py
"""Support for ASUSWRT routers.""" from __future__ import annotations from homeassistant.components.device_tracker import SOURCE_TYPE_ROUTER from homeassistant.components.device_tracker.config_entry import ScannerEntity from homeassistant.config_entries import ConfigEntry from homeassistant.core import HomeAssistant, ...
Python
0
@@ -522,16 +522,32 @@ r import + AsusWrtDevInfo, AsusWrt @@ -553,16 +553,16 @@ tRouter%0A - %0ADEFAULT @@ -1162,38 +1162,58 @@ ef add_entities( +%0A router +: AsusWrtRouter , async_add_enti @@ -1216,26 +1216,66 @@ entities -, tracked) +: AddEntitiesCallback, tracked: set%5Bstr%5D%0A) -%3E None :%0A %22...
f9ded788d74c18cec6e41b3258f83d5ecc20e49a
Fix newLine in gDrive
getTemperatures.py
getTemperatures.py
#!/usr/bin/python2 #should be executed each minute with cron #*/1 * * * * /path/getTemperatures.py #system time has tobe rigt -> start after NTP time sync import datetime import os import glob import time #Adafruit_DHT has to be installed -> https://github.com/adafruit/Adafruit_Python_DHT.git import Adafruit_DHT #Ada...
Python
0.00001
@@ -1732,13 +1732,8 @@ ure) -+%22%5Cn%22 )%0Awi @@ -1809,16 +1809,21 @@ taString ++%22%5Cn%22 )%0A%0Apath
b761ce959f512ce391a2a073462d00e9c90ab1f3
Migrate phase example to cartopy.
doc/pyplots/plot_phase.py
doc/pyplots/plot_phase.py
# -*- coding: utf-8 -*- """Plot to demonstrate the phase colormap. """ import numpy as np import matplotlib.pyplot as plt from netCDF4 import Dataset from mpl_toolkits.basemap import Basemap from matplotlib.ticker import FuncFormatter import typhon @FuncFormatter def degree_formatter(x, pos): """Create degree...
Python
0
@@ -17,17 +17,16 @@ f-8 -*-%0A -%0A %22%22%22Plot @@ -63,33 +63,14 @@ map. -%0A + %22%22%22%0A%0A -import numpy as np%0A impo @@ -101,21 +101,22 @@ plt%0A -%0Afrom +import netCDF4 imp @@ -115,64 +115,130 @@ CDF4 - import Dataset%0Afrom mpl_toolkits.basemap import Basemap +%0Aimport numpy as np%0Aimport car...
8cdea69e51241497f90c576ee386e9d7a2b011af
Update hyper-parameters to test the script for training
src/btc_parameters.py
src/btc_parameters.py
# Brain Tumor Classification # Script for Hyper Parameters # Author: Qixun Qu # Create on: 2017/10/14 # Modify on: 2017/10/14 # ,,, ,,, # ;" '; ;' ", # ; @.ss$$$$$$s.@ ; # `s$$$$$$$$$$$$$$$' # $$$$$$$$$$$$$$$$$$ # $$$$P""Y$$$Y""W$$$$$ # $$$$ p"$$$"q $$$$$ # $$$$ .$$$$$. $$$$' # $...
Python
0
@@ -949,16 +949,17 @@ %22train%22%5D +, %0A %22va @@ -1002,16 +1002,39 @@ lidate%22%5D +,%0A %22classes_num%22: 3, %0A %22pa @@ -1150,17 +1150,17 @@ _size%22: -2 +1 0,%0A %22 @@ -1173,12 +1173,12 @@ oches%22: -3 +2 %0A%7D%0A
454b04d8426803f6e1d4fffd0ad5b2bfb3d41531
remove unneeded line
ports/pyqt-webengine/minibuffer.py
ports/pyqt-webengine/minibuffer.py
from PyQt5.QtWebEngineWidgets import QWebEngineView import core_interface class Minibuffer(QWebEngineView): """Documentation for Minibuffer """ scripts = {} callback_count = 0 window_identifier = 0 def __init__(self, window_identifier, parent=None): super(Minibuffer, self).__init__(p...
Python
0.000015
@@ -374,61 +374,8 @@ fier -%0A self.setHtml(%22%22) # breaks without this line %0A%0A
18875cbe61311650803e1d3fdf27d1e5774fa246
improve attachments
bin/addons/base/ir/ir_attachment.py
bin/addons/base/ir/ir_attachment.py
# -*- encoding: utf-8 -*- ############################################################################## # # OpenERP, Open Source Management Solution # Copyright (C) 2004-2008 Tiny SPRL (<http://tiny.be>). All Rights Reserved # $Id$ # # This program is free software: you can redistribute it and/or modify #...
Python
0.000002
@@ -3499,16 +3499,344 @@ ck() +%0A %0A def action_get(self, cr, uid, context=None):%0A dataobj = self.pool.get('ir.model.data')%0A data_id = dataobj._get_id(cr, 1, 'base', 'action_attachment')%0A res_id = dataobj.browse(cr, uid, data_id, context).res_id%0A return self.pool.get('ir...
724e8770487bddaacbb8a36aca4c5299c0d64474
clean core urls
core/urls.py
core/urls.py
from django.conf.urls import patterns, include, url from django.contrib import admin admin.autodiscover() admin.site.site_header = 'Coworking space administration' urlpatterns = patterns('', # Examples: # url(r'^$', 'billjobs.views.home', name='home'), # url(r'^blog/', include('blog.urls')), url(r'^$...
Python
0.000001
@@ -25,18 +25,8 @@ port - patterns, inc @@ -35,17 +35,16 @@ de, url%0A -%0A from dja @@ -72,29 +72,8 @@ min%0A -admin.autodiscover()%0A admi @@ -145,50 +145,21 @@ s = -patterns('',%0A # Examples: +%5B %0A - # url(r'%5E $', @@ -158,245 +158,42 @@ (r'%5E -$', 'billjobs.views.home', name='home'),%0A ...
ddd508257a03e7a138720a9b4b2090fd231a626d
add a filename token.
toydist/config_parser/grammar.py
toydist/config_parser/grammar.py
from toydist.compat.pyparsing import \ Literal, WordStart, CharsNotIn, LineEnd, alphas, Word, \ indentedBlock, OneOrMore, ZeroOrMore, OnlyOnce, \ Group, empty, lineEnd, FollowedBy, col, alphanums, \ Forward, Optional, delimitedList, \ ParseException, ParseFatalException #-------...
Python
0
@@ -1,8 +1,19 @@ +import os%0A%0A from toy @@ -727,16 +727,62 @@ ) +%0Afilename = Word(alphanums + '.' + os.pathsep) %0A%0Aindent
eff700262c672d71e0670d5ba3eaab283112c3f4
Add support for arbitrary characters in generation rules (i.e. not categories)
Generator.py
Generator.py
import random import re def generateWord(meaning, form, settings): '''Takes an English string, desired form, generation categories, settings, and optional form-specific rules. Returns a generated word. ''' word = "" minS = settings["minS"] maxS = settings["maxS"] defaultrule = settings...
Python
0
@@ -1741,32 +1741,79 @@ Category(place)%0A + if category in categories:%0A @@ -1851,32 +1851,95 @@ ories%5Bcategory%5D) +%0A else:%0A syllable += category %0A%0A # Incl @@ -2030,32 +2030,75 @@ Category(place)%0A + if category i...
de4bef5f39a43816c061b0725966de846fa585bd
add missing () on f.close
iniconfig.py
iniconfig.py
""" brain-dead simple parser for ini-style files. (C) Ronny Pfannschmidt, Holger Krekel -- MIT licensed """ __version__ = "0.2.dev2" __all__ = ['IniConfig', 'ParseError'] class ParseError(Exception): def __init__(self, path, lineno, msg): Exception.__init__(self, path, lineno, msg) self.path = pat...
Python
0.000006
@@ -1470,16 +1470,18 @@ f.close +() %0A
cd45860f68002145dd7bcd04d201b38bff4cd501
Bump version
fcm_django/__init__.py
fcm_django/__init__.py
__author__ = "xTrinch" __email__ = "mojca.rojko@gmail.com" __version__ = "1.0.11" class NotificationError(Exception): pass try: from django import VERSION as DJANGO_VERSION if DJANGO_VERSION < (3, 2): default_app_config = "fcm_django.apps.FcmDjangoConfig" except ImportError: pass
Python
0
@@ -72,17 +72,17 @@ = %221.0.1 -1 +2 %22%0A%0A%0Aclas
5114973846b90a51155233b2472bfb7b25bcae14
Update typo in GCE service
fedimg/services/gce.py
fedimg/services/gce.py
# This file is part of fedimg. # Copyright (C) 2014 Red Hat, Inc. # # fedimg is free software: you can redistribute it and/or modify # it under the terms of the GNU Affero General Public License as # published by the Free Software Foundation, either version 3 of the # License, or (at your option) any later version. # #...
Python
0
@@ -1811,16 +1811,17 @@ om offic +i al Fedor
10cd33aba58d59e0e44f32b1ffaf5d50e15a33b0
prepare release 0.9.44
femagtools/__init__.py
femagtools/__init__.py
# -*- coding: utf-8 -*- """ femagtools ~~~~~~~~~~ Python bindings for FEMAG """ __title__ = 'femagtools' __version__ = '0.9.44-snapshot' __author__ = 'Ronald Tanner' __license__ = 'BSD' __copyright__ = 'Copyright 2016-2018 SEMAFOR Informatik & Energie AG' from .bch import Reader from .model import Mach...
Python
0
@@ -139,17 +139,8 @@ 9.44 --snapshot '%0A__
9d6716a7bf7c7811b0fcafc2e9aff89495f8fea3
Update runsegment.py
bin/runsegment.py
bin/runsegment.py
#!/usr/bin/python import os import numpy as np import shutil import common from segment import normalizefile, segmentfile def runAll(args): print('\n\n\nYou have requested to normalize and segment bincounts files') print('\tWARNING:') print('\t\tIF USING ANY REFERENCES OTHER THAN THOSE I PROVIDE I CAN...
Python
0.000001
@@ -1542,15 +1542,13 @@ %7Bx: -%5B False -%5D for @@ -1571,16 +1571,54 @@ name'%5D%7D%0A +%09sampleNormMethoDict%5BFalse%5D = %5BFalse%5D%0A %09%0A%09if no
9a05664f0a623d27e7062516d8014883fee2b28b
Add files via upload
locations/spiders/publix.py
locations/spiders/publix.py
# -*- coding: utf-8 -*- import scrapy import re from locations.items import GeojsonPointItem class PublixSpider(scrapy.Spider): name = "publix" allowed_domains = ['publix.com'] start_urls = ( 'http://weeklyad.publix.com/Publix/Entry/Locations/', ) def parse(self, response): respo...
Python
0
@@ -2940,40 +2940,8 @@ %7D%0A%0A - print(str(properties))%0A%0A %0A
c7d86d7dd82421fb1f189d15718eb9a55c5574cf
Add maybe_make_pardir()
file/maybe_make_dir.py
file/maybe_make_dir.py
import os # ============================================================================== # MAYBE_MAKE_DIR # ============================================================================== def maybe_make_dir(path): """ Checks if a directory path exist...
Python
0.000001
@@ -896,12 +896,644 @@ ame(file)%0A%0A%0A +# ==============================================================================%0A# MAYBE_MAKE_PARDIR%0A# ==============================================================================%0Adef maybe_make_pardir(file)...
e27953aad34bd1f416a1568ffb9f10609cf905b2
Clean up pidfile on exit, regardless of any errors
bin/summariser.py
bin/summariser.py
#!/usr/bin/env python # Copyright (C) 2012 STFC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicab...
Python
0.000001
@@ -4377,24 +4377,230 @@ ancelled.')%0A + sys.exit(1)%0A finally:%0A # Clean up pidfile regardless of any excpetions%0A # This even executes if sys.exit() is called%0A log.info('Removing Pidfile')%0A os.remove(pidfile)%0A log. @@ -4623,27 +4623,16 @@ -sys.exit(1...
cd7d7d6843e0159b8d272b8cfc572884d061b89a
Add test for equality between tuple and namedtuple.
tests/basics/namedtuple1.py
tests/basics/namedtuple1.py
try: try: from ucollections import namedtuple except ImportError: from collections import namedtuple except ImportError: print("SKIP") raise SystemExit T = namedtuple("Tup", ["foo", "bar"]) # CPython prints fully qualified name, what we don't bother to do so far #print(T) for t in T(1, ...
Python
0
@@ -526,16 +526,134 @@ uple))%0A%0A + # Check tuple can compare equal to namedtuple with same elements%0A print(t == (t%5B0%5D, t%5B1%5D), (t%5B0%5D, t%5B1%5D) == t)%0A%0A # Create
d4effa0749734293075b28a739affde55be52727
add some unit tests for bedpetobed12
tests/bedpetobed12_tests.py
tests/bedpetobed12_tests.py
from unittest import TestCase, main import os import sys import tempfile import difflib import svtools.bedpetobed12 class IntegrationTest_bedpetobed12(TestCase): def run_integration_test(self): test_directory = os.path.dirname(os.path.abspath(__file__)) test_data_dir = os.path.join(test_directory, ...
Python
0
@@ -110,16 +110,1562 @@ obed12%0A%0A +class TestBedpeToBlockedBedConverter(TestCase):%0A%0A def setUp(self):%0A self.converter = svtools.bedpetobed12.BedpetoBlockedBedConverter('TESTCONV', 20)%0A%0A def test_track_name(self):%0A self.assertEqual(self.converter.track_name(), 'track name=TESTCONV ite...
28d5bd2c00e5d3c3dfcb5198e45407568828a67f
Remove extension from config
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # import os import sys from sphinx.highlighting import lexers from pygments.lexers.web import PhpLexer extensions = [ 'sphinx.ext.autodoc', 'sphinx.ext.intersphinx', 'sphinx_http_domain' ] templates_path = ['_templates'] source_suffix = '.rst' master_doc = 'index' project = u'Dogmat...
Python
0.000001
@@ -194,34 +194,8 @@ inx' -,%0A 'sphinx_http_domain' %0A%5D%0At
4bf1ee120b2a660f9599fdd7589be1181179a28d
Fix import path for docs
docs/conf.py
docs/conf.py
import os import sys sys.path.insert(0, os.path.abspath(".")) project = "" copyright = "2020, Martin Domke" author = "Martin Domke" # The full version, including alpha/beta/rc tags release = "1.0.0" # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx....
Python
0.000004
@@ -52,16 +52,17 @@ spath(%22. +. %22))%0A%0Apro
3f6cab19825fa3bd573f325738ce113a3eb2695f
Fix sorting.
docs/conf.py
docs/conf.py
"""Sphinx configuration file.""" import os import sys import time import sphinx_rtd_theme sys.path.append(os.path.abspath('..')) # General configuration. author = 'Robpol86' exclude_patterns = ['_build'] copyright = '{}, {}'.format(time.strftime('%Y'), author) extensions = ['sphinxcontrib.disqus'] master_doc = 'in...
Python
0.000001
@@ -176,38 +176,8 @@ 86'%0A -exclude_patterns = %5B'_build'%5D%0A copy @@ -229,16 +229,46 @@ author)%0A +exclude_patterns = %5B'_build'%5D%0A extensio
6516234f0240b3ddc5429efb4da66420f23b4708
Fix url conf
platform/polycommon/polycommon/settings/api.py
platform/polycommon/polycommon/settings/api.py
#!/usr/bin/python # # Copyright 2018-2020 Polyaxon, Inc. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable ...
Python
0.999092
@@ -624,18 +624,8 @@ List -, Optional %0A%0Afr @@ -782,16 +782,29 @@ NF%22%5D = %22 +polyconf.urls %22%0A%0A d
fa180457ab1b24a608c3d6a9571d3858aad8af1e
version bump: 0.2
binary_builder.py
binary_builder.py
#!/usr/bin/env python from __future__ import print_function from platform import system import os, shutil, argparse def input(): try: return raw_input() except NameError: return __builtins__.input() __version__ = '0.1' def main(args): path = os.getcwd() while not args.file: de...
Python
0.000002
@@ -235,17 +235,17 @@ __ = '0. -1 +2 '%0A%0Adef m
22a05581e8d1b6f5f7fe952c75e314d20d04bfc9
Remove TODO -- we use gatherResults in txriak_manager already so this isn't a new requirement.
vumi/connectors.py
vumi/connectors.py
# TODO: We use gatherResults(), which requires Twisted>=11.1 # We need to either implement a fallback (which is easy enough) or # explicitly require a suitable Twisted version. from twisted.internet.defer import gatherResults from vumi import log from vumi.message import TransportMessage, TransportEvent, ...
Python
0
@@ -1,194 +1,4 @@ -# TODO: We use gatherResults(), which requires Twisted%3E=11.1%0A# We need to either implement a fallback (which is easy enough) or%0A# explicitly require a suitable Twisted version.%0A%0A from
c311dfdc8108a4196a3bc20f6002adbccfc9f9ec
Use REACHPATH in AWS submission script
indra/tools/reading/pmid_reading/read_pmids_aws.py
indra/tools/reading/pmid_reading/read_pmids_aws.py
from __future__ import absolute_import, print_function, unicode_literals from builtins import dict, str from indra.tools.reading.pmid_reading.read_pmids import READER_DICT from datetime import datetime DOC = \ """ This script is intended to be run on an Amazon ECS container, so information for the job either needs to ...
Python
0
@@ -2276,29 +2276,24 @@ n.get('REACH -_JAR_ PATH')%0A r @@ -2418,13 +2418,8 @@ EACH -_JAR_ PATH
77ccd056487a4ad5d58bef50fa10c1ac1a080888
Update function to optionally keep original extension
nlppln/utils.py
nlppln/utils.py
"""NLP pipeline utility functionality""" import os import shutil import glob from nlppln import CWL_PATH DEFAULT_DATA_DIR = '{}/.local/share/'.format(os.environ.get('HOME')) CWL_DATA_DIR_PREFIX = 'commonwl' def remove_ext(fname): """Removes the extension from a filename """ bn = os.path.basename(fname) ...
Python
0
@@ -552,16 +552,17 @@ fname)%0A%0A +%0A def out_ @@ -590,18 +590,513 @@ ame, ext -): +=None):%0A %22%22%22Return path of output file, given a directory, file name and extension.%0A%0A Args:%0A out_dir (str): path to the directory where output should be written.%0A fname (str): name of the input f...
bc5038c98d9107215b1c11716ba7f465f2f139d8
fix pep8 issue
examples/create_vlan.py
examples/create_vlan.py
''' Example: python ./examples/create_vlan.py [master] Master is an interface to add VLAN to, e.g. eth0 or tap0 or whatever else. Without parameters use tap0 as the default. ''' import sys from pyroute2 import IPDB ip = IPDB() try: if len(sys.argv) == 2: # Get master interface from the command line ...
Python
0.000001
@@ -447,17 +447,16 @@ p0.index - %0A
d5221ea7fae058fda79f57daa358d1b2389b9d1a
Create pidfile on start up if running as daemon.
celerymon/bin/celerymon.py
celerymon/bin/celerymon.py
#!/usr/bin/env python """celerymon .. program:: celerymon .. cmdoption:: -P, --port Port the webserver should listen to. Default: ``8989``. .. cmdoption:: -B, --bind Address the webserver should bind to. Default (any). .. cmdoption:: -f, --logfile Path to log file. If no logfile is specified, ``stder...
Python
0
@@ -771,16 +771,32 @@ strargv +, create_pidlock %0Afrom ce @@ -2888,16 +2888,77 @@ rkdir):%0A + with create_pidlock(pidfile) as pidlock:%0A
4adb0833d96d966ae0ea4f71979d383014e8d85e
Update waf key name
wafw00f/wafprio.py
wafw00f/wafprio.py
#!/usr/bin/env python # NOTE: this priority list is used so that each check can be prioritized, # so that the quick checks are done first and ones that require more # requests, are done later wafdetectionsprio = [ # cached default request ones first 'Yunjiasu (Baidu Cloud Computing)', 'PowerCDN (PowerCDN...
Python
0.000001
@@ -1979,15 +1979,22 @@ ic ( -Zendesk +Penta Security )',%0A
b559134bf980dc4f2410d8c94667205ad306ecd5
Change Sphinx theme
docs/conf.py
docs/conf.py
# Accelerator for npm, the Node.js package manager. # # Author: Peter Odding <peter@peterodding.com> # Last Change: June 28, 2017 # URL: https://github.com/xolox/python-npm-accel """Sphinx documentation configuration for the `npm-accel` project.""" import os import sys # Add the npm-accel source distribution's root ...
Python
0
@@ -2525,15 +2525,14 @@ = ' -classic +nature '%0A%0A#
fbd6b7f8e20c1237f3a718ae1e5fcc03a7ec4b05
Remove old releases variables
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- import os import alagitpull from recommonmark.transform import AutoStructify # Get the project root dir, which is the parent dir of this cwd = os.getcwd() project_root = os.path.dirname(cwd) # package data about = {} with open("../libvcs/__about__.py") as fp: exec(fp.read(), about) exten...
Python
0
@@ -495,223 +495,8 @@ %0A%5D%0A%0A -releases_unstable_prehistory = True%0Areleases_document_name = %5B%22history%22%5D%0Areleases_issue_uri = %22https://github.com/vcs-python/libvcs/issues/%25s%22%0Areleases_release_uri = %22https://github.com/vcs-python/libvcs/tree/v%25s%22%0A%0A issu
7409118c3306abcd538c2c0af3af301472c64140
use local function variables in query_api
crewchief.py
crewchief.py
#!/usr/bin/env python2 # # Description: This script is run at boot in a Rackconnected # cloud server. It will continue to run until # Rackconnect automation is complete, then it will # launch the scripts inside /etc/crewchief.d/. # # # Filelist: /etc/crewchief/ # ...
Python
0.000007
@@ -1620,24 +1620,213 @@ mplete. '''%0A + # pull our settings from the dictionary%0A max_api_attempts = settings.get('max_api_attempts')%0A api_wait_seconds = settings.get('api_wait_seconds')%0A # construct the endpoint url%0A apiurl = @@ -1871,32 +1871,32 @@ %7BINFO%7D'.format(%0A - REGION=...
604bbe5f339a1dccf06bc655b9c33ec170587137
Fix Usage of cliff commandmanager
magnum/cmd/driver_manage.py
magnum/cmd/driver_manage.py
# # Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # ...
Python
0.000071
@@ -3120,20 +3120,24 @@ Manager( -None +'magnum' ),%0A
a902b80b0f6bf201de626c7b3e2eddde6b23e3f8
Enable parsing of Google style docstrings
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Hoggorm documentation build configuration file, created by # sphinx-quickstart on Wed Dec 13 09:28:23 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # A...
Python
0
@@ -1072,16 +1072,39 @@ autodoc' +, 'sphinx.ext.napoleon' %5D%0A%0A# Add @@ -2539,16 +2539,513 @@ False%0A%0A%0A +# -- Options for Napoleon pre-processor -----------------------------------%0A%0Anapoleon_google_docstring = True%0Anapoleon_numpy_docstring = False%0A# napoleon_include_init_with_doc = False%0A# napoleo...
3c386d3761418996d06a0940c4cd247d31aa78a6
replace lmap with list comprehension
corehq/apps/userreports/indicators/__init__.py
corehq/apps/userreports/indicators/__init__.py
from __future__ import absolute_import from collections import defaultdict from future.utils import lmap from corehq.apps.userreports.util import truncate_value from corehq.form_processor.interfaces.dbaccessors import LedgerAccessors from fluff import TYPE_INTEGER class Column(object): def __init__(self, id, d...
Python
0.000284
@@ -73,39 +73,8 @@ ct%0A%0A -from future.utils import lmap%0A%0A from @@ -4097,13 +4097,9 @@ urn -lmap( +%5B self @@ -4107,25 +4107,58 @@ _make_column -, +(product_code) for product_code in self.produc @@ -4164,17 +4164,17 @@ ct_codes -) +%5D %0A%0A de
bafc61ce3029a244cd49251deda984d2d10f4af2
fix sort for date columns with missing values
corehq/apps/userreports/reports/data_source.py
corehq/apps/userreports/reports/data_source.py
from django.utils.datastructures import SortedDict from sqlagg import ( ColumnNotFoundException, TableNotFoundException, ) from sqlalchemy.exc import ProgrammingError from corehq.apps.reports.sqlreport import SqlData from corehq.apps.userreports.exceptions import ( UserReportsError, TableNotFoundWarning, ) ...
Python
0.000013
@@ -1,12 +1,54 @@ +import datetime%0Afrom datetime import date%0A from django. @@ -4563,129 +4563,877 @@ -ret.sort(%0A key=lambda x: x.get(col%5B0%5D, None),%0A reverse=col%5B1%5D == DESCENDING +is_descending = col%5B1%5D == DESCENDING%0A is_date =...
b76a330665015e83e03f6a77734ef2b6e1e25bae
improve SyncLogAssertionError logging and send to admins
corehq/ex-submodules/casexml/apps/case/util.py
corehq/ex-submodules/casexml/apps/case/util.py
from __future__ import absolute_import from collections import defaultdict import uuid from xml.etree import ElementTree import datetime from django.conf import settings from casexml.apps.case import const from casexml.apps.case.const import CASE_ACTION_UPDATE, CASE_ACTION_CREATE from casexml.apps.case.dbaccessors i...
Python
0
@@ -4705,44 +4705,26 @@ ert( -'@'.join(%5B'droberts', 'dimagi.com'%5D) +notify_admins=True )%0A @@ -4809,16 +4809,50 @@ ase_id,%0A + 'form_id': xform._id,%0A
334f35f2f4eb24ef2828d8eb79c5e6343349d2cc
Change sphinx theme
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # rubik_solver documentation build configuration file, created by # sphinx-quickstart on Tue May 9 20:13:45 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. ...
Python
0.000001
@@ -2844,18 +2844,70 @@ = ' -alabaster' +guzzle_sphinx_theme'%0A%0Aextensions.append(%22guzzle_sphinx_theme%22) %0A%0A# @@ -3069,18 +3069,16 @@ tion.%0A#%0A -# html_the @@ -3091,16 +3091,57 @@ ions = %7B +%0A %22project_nav_name%22: %22Rubik Solver%22,%0A %7D%0A%0A# Add
b422312a38b517d77f920ace68f24cbe0f60faaf
Update docs copyright year range
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Scrapy documentation build configuration file, created by # sphinx-quickstart on Mon Nov 24 12:02:52 2008. # # This file is execfile()d with the current directory set to its containing dir. # # The contents of this file are pickled, so don't put values in the namespace # that aren't pickleab...
Python
0
@@ -1409,17 +1409,17 @@ 2008-201 -3 +4 , Scrapy
7532dbc680b379d1774e12d6097d5afcb97b269b
Fix ordering of parameters in function _get_lon_lat_meters
gtfspy/geometry.py
gtfspy/geometry.py
from shapely.geometry import MultiPoint def get_convex_hull_coordinates(gtfs): """ Parameters ---------- gtfs: gtfs.GTFS Returns ------- lons: list of floats lats: list of floats """ lons, lats = _get_stop_lat_lons(gtfs) lon_lats = list(zip(lons, lats)) ...
Python
0.999641
@@ -968,24 +968,24 @@ meters(l -at +on s, l -on +at s):%0A
371f69ae2861c04bef9a4942427ad26bf431c72b
Update docs conf.
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- import re import os extensions = [ 'sphinx.ext.autodoc', 'sphinx.ext.autosummary', 'sphinx.ext.doctest', 'sphinx.ext.todo', 'sphinx.ext.coverage', 'sphinx.ext.ifconfig', 'sphinx.ext.viewcode', 'sphinxcontrib.napoleon' ] if os.getenv('SPELLCHECK'): extensions +...
Python
0
@@ -21,17 +21,48 @@ -*-%0A -import re +from __future__ import unicode_literals%0A %0Aimp @@ -68,16 +68,18 @@ port os%0A +%0A%0A extensio @@ -145,34 +145,8 @@ y',%0A - 'sphinx.ext.doctest',%0A @@ -492,182 +492,144 @@ rk'%0A -copyright = u'2014, Ionel Cristian M%C4%83rie%C8%99'%0Aversion = release = re.fin...
0f28572ef1ab2ce1c94e653fd9839e3e2f8d9812
Add imports
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Configuration file for the Sphinx documentation builder. # # This file does only contain a selection of the most common options. For a # full list see the documentation: # http://www.sphinx-doc.org/en/stable/config # -- Path setup ------------------------------------------------------------...
Python
0.000001
@@ -649,16 +649,65 @@ d_theme%0A +from recommonmark.parser import CommonMarkParser%0A %0A%0A# -- P
5cc376bda356ceec28c1385b180620353752cd5a
Add isolation properties
mcnet/components/network.py
mcnet/components/network.py
# Class for network functionality from . import Core, destAddrPredicate import z3 class Network (Core): """Represent a network, this encompases both routing and wiring""" def _init(self, context): self.ctx = context self.constraints = list() self.elements = list() def Attach (self,...
Python
0.000001
@@ -3465,16 +3465,887 @@ eway)%5D)%0A + %0A def SetIsolationConstraint (self, node, adjacencies):%0A %22%22%22Set isolation constraints on a node. Doesn't need to be set but%0A useful when interfering policies are in play.%22%22%22%0A%0A if not isinstance(adjacencies, list):%0A a...
a4a7e16ac2a29506cf22a125be43621f682aa174
fix documentation copyright string
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # RDMO Documentation documentation build configuration file, created by # sphinx-quickstart on Fri Mar 3 11:25:56 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated ...
Python
0.002682
@@ -668,100 +668,62 @@ .%0A#%0A -# import os%0A# import sys%0A# sys.path.insert(0, os.path.abspath('.'))%0Aimport sphinx_rtd_theme%0A +%0Aimport sphinx_rtd_theme%0A%0Afrom rdmo import __version__ %0A%0A# @@ -1478,85 +1478,201 @@ '201 -7, Jochen Klar, Claudia Engelhardt'%0Aauthor = u'Jochen Klar, Claudia Engelhard +...
c2af06e51207c2e261ddc6306c85d66d59d06427
switch to default (readthedocs) theme
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Private Postgres RDS documentation build configuration file, created by # sphinx-quickstart on Thu Apr 20 08:50:47 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerate...
Python
0
@@ -2838,17 +2838,15 @@ = ' -alabaster +default '%0A%0A#
6bb0015c132b5da0ee3b0c8147e88fd4dac39527
Bump version in the docs again
docs/conf.py
docs/conf.py
#!/usr/bin/env python3 # -*- coding: utf-8 -*- # # aiozmq documentation build configuration file, created by # sphinx-quickstart on Mon Mar 17 15:12:47 2014. # # This file is execfile()d with the current directory set to its containing dir. # # Note that not all possible configuration values are present in this # autog...
Python
0
@@ -462,16 +462,17 @@ ersion%0A%0A +# sys.path @@ -505,16 +505,17 @@ ('..'))%0A +# import a
c199f571440626ac05cdc0c34f831c3b0f8a2b25
Use MathJax.
docs/conf.py
docs/conf.py
# # PyWENO documentation build configuration file # import os import sys # path to autogen'ed modules sys.path.append(os.path.abspath('..')) # mock out some extension modules class Mock(object): def __init__(self, *args, **kwargs): pass def __call__(self, *args, **kwargs): return Mock() ...
Python
0
@@ -691,16 +691,17 @@ entions%0A +# extensio @@ -730,17 +730,16 @@ odoc' %5D%0A -# extensio
2d0de066d955e6f349e52958c450f6aa714315b0
add side bar
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # mirtop documentation build configuration file, created by # sphinx-quickstart on Tue Nov 14 15:51:17 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # Al...
Python
0.000001
@@ -1262,18 +1262,16 @@ ring:%0A#%0A -# source_s @@ -1294,16 +1294,18 @@ '.md'%5D%0A +# source_s @@ -1544,32 +1544,52 @@ arc K. Halushka, + Michael Hackenberg, Gianvito Urgese @@ -1699,16 +1699,36 @@ alushka, + Michael Hackenberg, Gianvit @@ -3654,16 +3654,69 @@ '**': %5B%0A + 'navigation.html',%0A...
0f7692c86ab319bc3c0bb3f0729ec941b567d250
update intersphinx
docs/conf.py
docs/conf.py
#!/usr/bin/env python # -*- coding: utf-8 -*- # # scvi documentation build configuration file, created by # sphinx-quickstart on Fri Jun 9 13:47:02 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autoge...
Python
0
@@ -2555,149 +2555,8 @@ e),%0A - leidenalg=(%22https://leidenalg.readthedocs.io/en/latest/%22, None),%0A louvain=(%22https://louvain-igraph.readthedocs.io/en/latest/%22, None),%0A @@ -2893,16 +2893,70 @@ None),%0A + torch=(%22https://pytorch.org/docs/master/%22, None),%0A )%0A%0A# Gen
861b51c6319890f3adb023424ad0ad9c202b063d
Update version to 1.0.3 in docs too
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # comics documentation build configuration file, created by # sphinx-quickstart on Sat Dec 5 17:33:45 2009. # # This file is execfile()d with the current directory set to its containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All ...
Python
0
@@ -1655,10 +1655,8 @@ .0.3 -a1 '%0A%0A#
6e3e54df5ac29d8672974c0bc30d414619215e0a
Connect doc version with pom.xml
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Configuration file for the Sphinx documentation builder. # # This file does only contain a selection of the most common options. For a # full list see the documentation: # http://www.sphinx-doc.org/en/master/config import os import sys import pkg_resources # If extensions (or modules to d...
Python
0
@@ -257,16 +257,56 @@ port sys +%0Afrom xml.etree import ElementTree as ET %0A%0Aimport @@ -605,16 +605,207 @@ ext'))%0A%0A +# Read the latest Yamcs versions from the Maven pom.xml%0Atree = ET.ElementTree()%0Atree.parse('../pom.xml')%0Ayamcs_version_el = tree.getroot().find('%7Bhttp://maven.apache.org/POM/4.0.0%7Dve...
49fd49e7ee9fbb9dc8fdc785bc022ca26dd6ff16
Fix dirty-flag removal in docs/conf.py
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # This file is execfile()d with the current directory set to its containing dir. import os, sys, time, cgi sys.path.append(os.path.abspath("..")) from get_version import __version__ as hy_version if hy_version.endswith(".dirty"): # Read the Docs might dirty its checkout, so ignore this. ...
Python
0.000001
@@ -107,16 +107,20 @@ %0A%0Aimport + re, os, sys @@ -131,16 +131,16 @@ me, cgi%0A - sys.path @@ -225,46 +225,8 @@ ion%0A -if hy_version.endswith(%22.dirty%22):%0A # Re @@ -270,65 +270,80 @@ so -ignore this.%0A hy_version = hy_version%5B:-len(%22.dirty%22)%5D +strip the dirty flag.%0Ahy_version = re.sub...
e05465657c6738f02eafdd851cfa74c6d6bbe439
Print path
docs/conf.py
docs/conf.py
#!/usr/bin/env python3 # # pliers documentation build configuration file, created by # sphinx-quickstart on Wed Dec 27 16:15:14 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All...
Python
0.000004
@@ -784,16 +784,67 @@ b('*'))%0A +print(os.path.dirname(os.path.realpath(__file__)))%0A %0A%0A# -- G
1a98b29293ccfab6534a48402414e89726d8e5bb
Set icon, summary for notification
Python/pomodoro.py
Python/pomodoro.py
#!/usr/bin/env python # -*- coding: utf-8 -*- import datetime import subprocess as spr import time def main(): start = datetime.datetime.now() spr.call(['notify-send', 'Started new pomodoro']) time.sleep(30 * 60) end = datetime.datetime.now() duration = (end - start).total_seconds() // 60 fo...
Python
0
@@ -152,54 +152,219 @@ s -pr.call(%5B'notify-send', 'Started new pomodoro' +tart_str = start.strftime(%22%25H:%25M:%25S%22)%0A spr.call(%5B'notify-send',%0A '--app-name', 'POMODORO',%0A '--icon', 'dialog-information',%0A 'New pomodoro', 'From: %7B%7D'.format(start_str) %5D...
656457c049e32fc8c40ef51ec35a68f6266d1752
Fix str() on ComparisonInstructions.
QGL/ControlFlow.py
QGL/ControlFlow.py
from .BlockLabel import newlabel, label, endlabel from .PulseSequencer import Pulse from functools import wraps from .mm import multimethod ## QGL control-flow statements ## def qif(mask, ifSeq, elseSeq=None): if elseSeq: return [CmpEq(mask), Goto(label(ifSeq))] + elseSeq + [ Goto(endlabel(if...
Python
0
@@ -4428,95 +4428,14 @@ -labelPart = %22%7B0%7D: %22.format(self.label) if self.label else %22%22%0A return labelPart + +return %22CM
d975a5c398d6b4892cea2299bb26d83dcb10c971
Remove deprecated function call
blitz/web/http.py
blitz/web/http.py
__author__ = 'Will Hart' import json import logging import os from blitz.constants import CommunicationCodes from blitz.io.tcp import TcpBase, TcpCommunicationException from blitz.web.api import ApiRequestHandler class IndexHandler(ApiRequestHandler): def get(self): # just read the file in to prevent t...
Python
0.000037
@@ -2824,21 +2824,36 @@ tcp. -request_s +send(CommunicationCodes.S top -( )%0A%0A
27de8081925ef93b1c923d97781518ce0324d7c6
Add sphinx.ext.napoleon for parsing google style doc
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # nlppln documentation build configuration file, created by # sphinx-quickstart on Tue Nov 28 16:27:45 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # Al...
Python
0
@@ -1124,20 +1124,16 @@ utodoc', -%0A 'sphinx @@ -1149,16 +1149,53 @@ rsphinx' +,%0A 'sphinx.ext.napoleon' %5D%0A%0A# Add
37b4cacd258eca8b22cc9698783b0d7496ada8c6
Fix openscm residual
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Configuration file for the Sphinx documentation builder. # # This file does only contain a selection of the most common options. For a # full list see the documentation: # http://www.sphinx-doc.org/en/master/config # -- Path setup ------------------------------------------------------------...
Python
0
@@ -4703,15 +4703,16 @@ c, %22 -openscm +pymagicc %22, %22
156d3f3b7de98752d70e861602bd9d21936f5e6a
Allow specification of the validation log destination.
nodes/picard.py
nodes/picard.py
#!/usr/bin/python # # Copyright (c) 2012 Mikkel Schubert <MSchubert@snm.ku.dk> # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights #...
Python
0
@@ -1349,16 +1349,36 @@ bamfile, + output_file = None, ignore @@ -1395,32 +1395,32 @@ ndencies = ()):%0A - jar = o @@ -1572,32 +1572,33 @@ UT=%25(IN_BAM)s%22%5D%0A +%0A for erro @@ -1659,16 +1659,94 @@ ror,))%0A%0A + if not output_file:%0A output_file = bamfile + %22.validate...
19b65cddc821713ae66c5c02d74a361332b464d4
exclude readme.rst from sphinx
docs/conf.py
docs/conf.py
#!/usr/bin/env python3 # -*- coding: utf-8 -*- # # urlquick documentation build configuration file, created by # sphinx-quickstart on Fri Apr 7 17:02:08 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # a...
Python
0.000003
@@ -2477,16 +2477,30 @@ S_Store' +, 'README.rst' %5D%0A%0A# The @@ -3347,24 +3347,133 @@ _static'%5D%0A%0A%0A +# This will exclude any warnings of 'nonlocal image URI found'.%0Asuppress_warnings = %5B'image.nonlocal_uri'%5D%0A%0A%0A # -- Options
55b77558713aa87fa326de04db5db2df470130be
Create index when merging bam files.
nodes/picard.py
nodes/picard.py
import os from pypeline.node import CommandNode from pypeline.atomiccmd import AtomicCmd from pypeline.common.fileutils import swap_ext class ValidateBAMNode(CommandNode): def __init__(self, config, bamfile, ignore = (), dependencies = ()): jar = os.path.join(config.picard_root, "ValidateSamFile.jar") ...
Python
0
@@ -1219,16 +1219,20 @@ %22 %25 str( +not keep_dup @@ -1249,16 +1249,53 @@ ower(),%0A + %22CREATE_INDEX=True%22,%0A @@ -1544,32 +1544,105 @@ = output_file,%0A + OUT_BAI = swap_ext(output_file, %22.bai%22),%0A
19db67efd230880f4ddf5d0ae61e99cb202fe700
Add folds to the Sphinx config file.
docs/conf.py
docs/conf.py
#!/usr/bin/env python3 # -*- coding: utf-8 -*- # # Glooey documentation build configuration file, created by # sphinx-quickstart on Tue Apr 4 09:53:05 2017. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # aut...
Python
0
@@ -748,84 +748,195 @@ ))%0A%0A -%0A# -- General configuration ------------------------------------------------ +## Customizations%0A%0A# Add a screenshot directive. This would basically be the same as %60figure%60, %0A# but it would automatically add the download link as a caption.%0A%0A## General configuration %0A...
21dc9eef02019d4f97ec24ea298a26d38ede74dd
update docs
docs/conf.py
docs/conf.py
# -*- coding: utf-8 -*- # # Configuration file for the Sphinx documentation builder. # # This file does only contain a selection of the most common options. For a # full list see the documentation: # http://www.sphinx-doc.org/en/master/config # -- Path setup ----------------------------------------------------...
Python
0.000001
@@ -847,48 +847,53 @@ %0D%0A%0D%0A -# The short X.Y version%0D%0Aversion = '0.1' +import lingam%0D%0Aversion = lingam.__version__%0D%0A %0D%0A# @@ -954,13 +954,26 @@ e = -'0.1' +lingam.__version__ %0D%0A%0D%0A
d65e58f108d6060166319b89686dea31e25b058d
Update wiki.py
lamia/wiki.py
lamia/wiki.py
import requests import urllib from requests.auth import HTTPBasicAuth class entry(object): def __init__(self, page, auther): self.user = auther.user self.key = auther.key self.id_number = page["id"] self.created_at = page["created_at"] self.last_update = page["updated_at"] self.title = page["title"] ...
Python
0.000001
@@ -752,16 +752,17 @@ lf.body) +, %0A%09%09%09%09%09 a @@ -987,16 +987,17 @@ r(body)) +, %0A%09%09%09%09%09 a
255370651317d3729f9c71dae8b91daff09947ca
version bump 0.2.0a
YesssSMS/YesssSMS.py
YesssSMS/YesssSMS.py
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Send SMS via yesss.at web interface with your yesss login and password """ #from __future__ import print_function VERSION = "0.1.2" # # @author: Florian Klien <flowolf@klienux.org> # DESC = "YesssSMS let's you send SMS via yesss.at's website" LONG_DESC = """\ YesssSMS...
Python
0.000001
@@ -175,11 +175,12 @@ %220. -1.2 +2.0a %22%0A%0A#
cba5d8b152093612eee929f0d07d088e17d74cc1
Bump of version to 1.0.0 to make it compatible with Firefox 4 https://github.com/darwin/firepython/issues/13
firepython/__init__.py
firepython/__init__.py
# -*- mode: python; coding: utf-8 -*- """ FireLogger_ server-side support library for Python. For usage see ``README.txt`` or visit the `github homepage`_. .. _FireLogger: https://addons.mozilla.org/en-US/firefox/addon/11090 .. _github homepage: http://github.com/darwin/firepython """ __api_version__ = '0.9' # ^--- c...
Python
0
@@ -300,19 +300,19 @@ on__ = ' -0.9 +1.0 '%0A# %5E--- @@ -372,11 +372,11 @@ = ' -0.9 +1.0 .0'
a2d575aa64da07fb4d40d38b7404c63bbb8a1cd2
Add on_delete to ForeignKey
tests/default_app/models.py
tests/default_app/models.py
from django.db import models import swapper class BaseType(models.Model): name = models.CharField(max_length=255) class Meta: abstract = True class Type(BaseType): class Meta: swappable = swapper.swappable_setting("default_app", "Type") class Item(models.Model): type = models.Fore...
Python
0.000001
@@ -320,16 +320,25 @@ eignKey( +%0A swapper. @@ -374,16 +374,47 @@ %22Type%22) +, on_delete=models.CASCADE%0A )%0A na
2627e2b7ef516a9be2b453e4c216ef7a163e0673
Bump version to 0.6.1.post1
gurtel/__init__.py
gurtel/__init__.py
__version__ = '0.6.1'
Python
0
@@ -13,10 +13,16 @@ = '0.6.1 +.post1 '%0A
c2e886a34b78283f56feb660de2a55fe999dfaba
remove `move_in` part of user integration test
tests/lib/user/test_user.py
tests/lib/user/test_user.py
# Copyright (c) 2016 The Pycroft Authors. See the AUTHORS file. # This file is part of the Pycroft project and licensed under the terms of # the Apache License, Version 2.0. See the LICENSE file for details. from pycroft import config from pycroft.lib import user as UserHelper from pycroft.model import session from .....
Python
0
@@ -2329,843 +2329,4 @@ one%0A -%0A UserHelper.move_in(%0A user=new_user,%0A building_id=test_building.id,%0A level=1,%0A room_number=%221%22,%0A mac=test_mac,%0A birthdate=test_birthdate,%0A processor=self.processing_user,%0A )...
b8a06cb92dedd17c1706c9f08ee4c1a562c84407
add early stopping and standardize gamma calculation
predictive_imputer/predictive_imputer.py
predictive_imputer/predictive_imputer.py
# -*- coding: utf-8 -*- import numpy as np from sklearn.base import BaseEstimator, TransformerMixin from sklearn.ensemble import RandomForestRegressor from sklearn.preprocessing import Imputer from sklearn.utils.validation import check_array, check_is_fitted, check_X_y class PredictiveImputer(BaseEstimator, Transfor...
Python
0
@@ -866,16 +866,53 @@ _ = %5B%5D%0A%0A + new_imputed = imputed.copy()%0A @@ -942,35 +942,36 @@ N):%0A -new +last _imputed = imput @@ -957,32 +957,36 @@ last_imputed = +new_ imputed.copy()%0A%0A @@ -984,16 +984,28 @@ .copy()%0A + %0A @@ -1055,32 +1055,37 @@ X_s =...
e703305507cb8abbf1475f83701b07420e31ece8
fix for csv lookup path
scripts/metadata/reformat_metadata_files_and_archive.py
scripts/metadata/reformat_metadata_files_and_archive.py
#!/usr/bin/env python # ######################################################################## # # A script for reformatting metadata and samplesheet files # and copy them to the archive dir with additional year and month tags # For checking the usgae, run the script with -h flag # ###################################...
Python
0
@@ -1634,16 +1634,31 @@ listdir( +path=input_path ):%0A
52ea3c736178a6a7a693a7a6a819e7c24b29454f
Revert back VariantDirWrap for Simba framework (compatibility)
builder/frameworks/simba.py
builder/frameworks/simba.py
# Copyright 2014-present PlatformIO <contact@platformio.org> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicabl...
Python
0
@@ -1300,16 +1300,134 @@ cate)%0A%0A%0A +def VariantDirWrap(env, variant_dir, src_dir, duplicate=False):%0A env.VariantDir(variant_dir, src_dir, duplicate)%0A%0A%0A env = De @@ -1474,16 +1474,46 @@ Sources) +%0Aenv.AddMethod(VariantDirWrap) %0A%0Aenv.Re
fd81eb224f17742595d87915a92dfb83df84b9c4
Update inventory test from 'release' branch
functional_tests/test_jahia2wp.py
functional_tests/test_jahia2wp.py
"""(c) All rights reserved. ECOLE POLYTECHNIQUE FEDERALE DE LAUSANNE, Switzerland, VPSI, 2017""" import os import shutil import pytest from settings import OPENSHIFT_ENV, SRC_DIR_PATH from utils import Utils from wordpress import WPUser, WPBackup from wordpress.generator import MockedWPGenerator SCRIPT_FILE = os.pat...
Python
0
@@ -178,16 +178,36 @@ DIR_PATH +, WP_SITE_INSTALL_OK %0Afrom ut @@ -4388,19 +4388,16 @@ %7B2%7D; -ok; %7B3%7D;%7B4%7D; wp_%22 @@ -4392,16 +4392,20 @@ %7B3%7D;%7B4%7D; +%7B5%7D; wp_%22.for @@ -4461,16 +4461,36 @@ ST_SITE, + WP_SITE_INSTALL_OK, SITE_UR
00286ba511cf3b13ff3ec1c64752743c43e00b68
parent, parent_no merge to parent_no
prd_detail_crawler/spiders/biccamera_spider.py
prd_detail_crawler/spiders/biccamera_spider.py
# -*- coding: utf-8 -*- import scrapy import re import datetime class BiccameraSpider(scrapy.Spider): name = "biccamera" start_urls = [ 'http://www.biccamera.com/bc/c/contents/sitemap/index.jsp' ] @staticmethod def _extract_disp_no(url): dispNo = re.findall(r'dispNo=(\d+)', url) ...
Python
0.999888
@@ -745,16 +745,19 @@ 'parent +_no ': None, @@ -1426,16 +1426,19 @@ 'parent +_no ': paren
e3f4afd0fd7b9beaca4c4ddaa3cc1c7ade24e047
capitalize IP
ip_mailer.py
ip_mailer.py
#!/usr/bin/python # Script to email Raspberry Pi IP Address at boot using Gmail SMTP import subprocess import smtplib import socket from email.mime.text import MIMEText import datetime # Change to your own account information to = 'me@example.com' gmail_user = 'test@gmail.com' gmail_password = 'yourpassword' smtpserv...
Python
0.999999
@@ -699,18 +699,18 @@ = 'Your -ip +IP is %25s'
8f1cf7f71cae44967a4fe260d149eb6c49c40d17
Add test for successive traffic entries
tests/model/test_traffic.py
tests/model/test_traffic.py
from pycroft.model.traffic import PmacctTrafficEgress, PmacctTrafficIngress, TrafficVolume from tests import FactoryDataTestBase from tests.factories.traffic import PMAcctTrafficEgressFactory, PMAcctTrafficIngressFactory from tests.factories.user import UserWithHostFactory class PMAcctPseudoTableTest(FactoryDataTestB...
Python
0
@@ -1196,16 +1196,728 @@ (), 0)%0A%0A + def test_egress_update_successive_entries(self):%0A data = %5B%0A # timestamp, packets, amount%0A ('2018-03-15 00:15:00', 200, 1024),%0A ('2018-03-15 10:15:00', 324, 500),%0A ('2018-03-15 23:59:00', 12, 7055),%0A %5D%0...
e165337cf2af38c785a8be162d3228f0ad92a2df
allow to save/load trained networkds
brain/__init__.py
brain/__init__.py
#!/usr/bin/env python2 # -*- coding : utf-8 -*- import logging import math import random __author__ = "Julien Rialland" __copyright__ = "Copyright 2015, J.Rialland" __license__ = "Apache License 2.0" __version__ = "0.2" __maintainer__ = __author__ __email__ = "julien.rialland@gmail.com" __status__ = "Production" de...
Python
0
@@ -83,16 +83,44 @@ random%0A +import pickle , zlib, base64 %0A%0A__auth @@ -4221,16 +4221,212 @@ output%0A%0A + def dump(self):%0A return base64.b64encode(zlib.compress(pickle.dumps(self), 9))%0A %0A @staticmethod%0A def load(s):%0A return pickle.loads(zlib.decompress(base64.b64decode(s)))...
b3a216bbb490f6d1a69c77f0d1de76937984f716
kill off whitespace; allows for indentation for sections
oneCommand.py
oneCommand.py
from __future__ import print_function from util import * import nbtencoder as nbt import argparse import sys, os cprintconf.name = "One Command" cprintconf.color = bcolors.PEACH parser = argparse.ArgumentParser() parser.add_argument("-m", "--mode", help="Uses manual mode", dest="mode", default="", choices=["m", "i"...
Python
0.000013
@@ -3354,16 +3354,53 @@ ontinue%0A +%09%09command = command.strip().rstrip()%0A %09%09if com
ebd2fc847336d5e1497b57987c255f9d2965339e
Add number days argument
project/api/management/commands/sync_groups.py
project/api/management/commands/sync_groups.py
# Standard Libary import datetime # Django from django.core.management.base import BaseCommand # First-Party from api.models import Group from bhs.models import Structure from bhs.updaters import update_or_create_group_from_structure from django.utils import ( timezone, ) class Command(BaseCommand): help = ...
Python
0.014846
@@ -274,16 +274,17 @@ one,%0A)%0A%0A +%0A class Co @@ -419,16 +419,34 @@ gument(%0A + '-a',%0A @@ -592,16 +592,194 @@ )%0A%0A + parser.add_argument(%0A '-d',%0A '--days',%0A type=int,%0A dest='days',%0A help='Number of days to u...
d9a6071674857ceae566d29c7c77a31a5ed5214d
Return proper WWW-Authenticate header if API authentication fails
byceps/blueprints/api/decorators.py
byceps/blueprints/api/decorators.py
""" byceps.blueprints.api.decorators ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :Copyright: 2006-2021 Jochen Kupperschmidt :License: Revised BSD (see `LICENSE` file for details) """ from functools import wraps from typing import Optional from flask import abort, request from ...services.authentication.api import service as a...
Python
0.001051
@@ -256,16 +256,68 @@ request +%0Afrom werkzeug.datastructures import WWWAuthenticate %0A%0Afrom . @@ -560,16 +560,73 @@ oken():%0A + www_authenticate = WWWAuthenticate('Bearer')%0A @@ -657,24 +657,32 @@ nticate= -'Bearer' +www_authenticate )%0A
aac6f85e7ec2952d9a8e84c585f1cf26a2c9dda7
Change the way ext_colorlog.py locates its config
cement/ext/ext_colorlog.py
cement/ext/ext_colorlog.py
""" Cement colorlog extension module. """ import os import sys import logging from colorlog import ColoredFormatter from ..ext.ext_logging import LoggingLogHandler from ..utils.misc import is_true class ColorLogHandler(LoggingLogHandler): """ This class implements the Log Handler interface. It is a sub...
Python
0
@@ -2020,33 +2020,51 @@ ig.get('log. -colorlog' +%7B%7D'.format(self.Meta.label) , 'colorize_ @@ -2384,33 +2384,51 @@ ig.get('log. -colorlog' +%7B%7D'.format(self.Meta.label) , 'colorize_ @@ -2623,33 +2623,51 @@ ig.get('log. -colorlog' +%7B%7D'.format(self.Meta.label) , 'colorize_ @@ -3352,17 +3352,35 @@ log. -c...
b5653ac28ac8358127943bd1f40c22dfd8a274f3
Make Python example output identical to C++ and Java by removing redundant spaces.
examples/list_people.py
examples/list_people.py
#! /usr/bin/python # See README.txt for information and build instructions. import addressbook_pb2 import sys # Iterates though all people in the AddressBook and prints info about them. def ListPeople(address_book): for person in address_book.person: print "Person ID:", person.id print " Name:", person.na...
Python
0.000012
@@ -519,36 +519,35 @@ Mobile phone #: - %22,%0A + elif phone @@ -613,33 +613,32 @@ %22 Home phone #: - %22,%0A elif ph @@ -685,16 +685,16 @@ n.WORK:%0A + @@ -715,17 +715,16 @@ phone #: - %22,%0A
74ff6e3ab89fabf44fb40397209b1ea2570a71e5
Remove obsolete debug message.
mediagoblin_picscout/api.py
mediagoblin_picscout/api.py
# MediaGoblin plugin for searching image metadata in the PicScout database. # # Copyright 2013 Commons Machinery http://commonsmachinery.se/ # # Authors: Artem Popov <artfwo@commonsmachinery.se> # # Distributed under GNU Affero GPL v3, please see LICENSE in the top dir. import json, urllib, urllib2 import requests imp...
Python
0.000001
@@ -2722,35 +2722,8 @@ n()%0A - print response_data %0A
ff4dd944335f2469cb26bbb5234e0ee377c68a18
refactor example maurer_rose.py
examples/maurer_rose.py
examples/maurer_rose.py
# Purpose: draw a maurer rose with polylines # https://en.wikipedia.org/wiki/Maurer_rose # Copyright (c) 2019-2021, Manfred Moitzi # License: MIT License from typing import Iterable, Tuple import pathlib import math import ezdxf from ezdxf import zoom DIR = pathlib.Path("~/Desktop/Outbox").expanduser() N = 6 # The ro...
Python
0.999478
@@ -1,93 +1,4 @@ -# Purpose: draw a maurer rose with polylines%0A# https://en.wikipedia.org/wiki/Maurer_rose%0A # Co @@ -17,17 +17,17 @@ 2019-202 -1 +2 , Manfre @@ -157,19 +157,19 @@ t zoom%0A%0A -DIR +CWD = pathl @@ -209,16 +209,319 @@ duser()%0A +if not CWD.exists():%0A CWD = pathlib.Path(%22.%22)%0A%0A# --...
89f3b80aa92c8da090266f725d09129f4fc28088
Make framework_test listdir more robust by checking a set, not a list
client/tests/framework_test.py
client/tests/framework_test.py
from models import core from unittest import mock import exceptions import ok import os import shutil import sys import unittest DEMO = 'demo_assignments' INVALID = os.path.join(DEMO, 'invalid') VALID = os.path.join(DEMO, 'valid') TMP = os.path.join(DEMO, 'tmp') class TestProtocol(ok.Protocol): def __init__(self,...
Python
0.001095
@@ -3192,33 +3192,33 @@ elf.assertEqual( -%5B +%7B ok.INFO_FILE%5D, s @@ -3213,17 +3213,17 @@ NFO_FILE -%5D +%7D , self.l @@ -3689,17 +3689,17 @@ rtEqual( -%5B +%7B ok.INFO_ @@ -3711,17 +3711,17 @@ 'q1.py' -%5D +%7D , self.l @@ -4332,17 +4332,17 @@ return -%5B +%7B f for f @@ -4381,17 +4381,17 @@ cache__...
b0fff7ee5b587213da1b76df0907ee0e9e3746ab
Print out last gameID after all tasks completed.
admin/checkTaskCompletion.py
admin/checkTaskCompletion.py
#!/usr/bin/env python3 import configparser import time from datetime import datetime import pymysql parser = configparser.ConfigParser() parser.read("../halite.ini") DB_CONFIG = parser["database"] def check_compiles(db): db.begin() with db.cursor() as cursor: cursor.execute("SELECT COUNT(*) FROM Us...
Python
0
@@ -1807,36 +1807,220 @@ -print(%22All tasks completed.%22 +db.begin()%0A with db.cursor() as cursor:%0A cursor.execute(%22SELECT MAX(gameID) FROM Game%22)%0A max_game = cursor.fetchone()%5B%22MAX(gameID)%22%5D%0A print(%22All tasks completed, last gameID %25d.%22 %25 (max_game,) )%0A%0Ai
40ed344eab49427cee04859d1ba3136d4211ebee
Return [] if the video's chunks object doesn't contain "live".
getflv.py
getflv.py
'''Given video id, output the FLV URLs A video ID should look something like a12345. ''' import requests import re import gzip import json import sys CHUNK_URL = 'http://api.twitch.tv/api/videos/{0}?as3=t' default_headers = {'User-Agent': 'ArchiveTeam'} def main(): video_id = sys.argv[1] output_filename = ...
Python
0.000022
@@ -1100,24 +1100,60 @@ results!')%0A%0A + if 'live' in doc%5B'chunks'%5D:%0A urls = l @@ -1204,16 +1204,91 @@ 'live'%5D) +%0A else:%0A print('No live chunks found for item')%0A urls = %5B%5D %0A%0A re
681a29ae5a4cd9fb3278bccad981b09d3293286d
fix bug in args parsing for the sinan client
client/libsinan/args.py
client/libsinan/args.py
import optparse def parse_key_value(key, value, args): if ':' not in key: args[key] = value return key, rest = key.split(':', 1) args = args.setdefault(key, {}) parse_key_value(rest, value, args) def erl_args_callback(option, opt_str, value, parser): parser.values.erl_args = lis...
Python
0
@@ -2500,24 +2500,117 @@ pts'%5D)%0A%0A +if options.release:%0A parse_key_value('-r', options.release, args%5B'server_opts'%5D)%0A%0A return args%0A @@ -2608,18 +2608,16 @@ urn args -%0A%0A %0A%0Adef _t
504d2d6ed54620c3a8b988566f2cef74503b4adf
modify import statement in online_check.py
online_check.py
online_check.py
import wait_socket_messages as wsm import socket_handler as sh import socket def ReceivingOnlineChecks(ready_socket): while(1): check, from_who = ready_socket.recvfrom(10) ready_socket.sendto(b'Online',(from_who, check_online_port)) ready_socket.close() pass def CheckSomeoneOnline(...
Python
0.000001
@@ -326,16 +326,19 @@ s = +sh. CreatePo
8de8da05bb9461aaa48d3058f5b1e2caab6191f1
Use dict() syntax that works in Python 2.6 onward
openmath/xml.py
openmath/xml.py
from . import openmath as om openmath_ns = "http://www.openmath.org/OpenMath" omtags = { "OMOBJ": om.OMObject, "OMR": om.OMReference, "OMI": om.OMInteger, "OMF": om.OMFloat, "OMSTR": om.OMString, "OMB": om.OMBytes, "OMS": om.OMSymbol, "OMV": om.OMVariable, "OMFOREIGN": om.OMForeign...
Python
0.000017
@@ -502,16 +502,17 @@ r%0A %7D%0A +%0A inv_omta @@ -516,17 +516,21 @@ mtags = -%7B +dict( (v,k) fo @@ -552,17 +552,17 @@ .items() -%7D +) %0A %0Ade