text stringlengths 7 3.69M |
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module.exports = function($scope, $state, $location, $http, ImageService, QueryParser, ImageApiService, envService, UserService) {
$scope.doImageSearch = function(){
console.log('_IMAGE: search controller')
var query = QueryParser.parse($scope.searchText)
var url = envService.read('apiUrl') + '/images' + '?' + query
var options = { headers: { "accesstoken": UserService.accessToken() }}
console.log('URL: ' + url)
console.log('OPTIONS: ' + JSON.stringify(options))
$http.get(url, options)
.then(function(response){
var jsonData = response.data
var images = jsonData['images']
ImageService.setImageList(images)
var id = images[0]['id']
console.log('id = ' + id)
ImageApiService.getImage(id)
.then(function(response) {
console.log('GOING TO IMAGES')
$state.go('images', {}, {reload: true})
})
});
};
}
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// Generated by CoffeeScript 1.4.0
(function() {
var TestResult;
TestResult = (function() {
function TestResult(_case, logs, error) {
this["case"] = _case;
this.logs = logs;
this.error = error;
this.pass = !this.error;
}
return TestResult;
})();
module.exports = TestResult;
}).call(this);
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/*
*
* 文件名称：baseInfo.js
* 摘 要：單一商品修改和新增 商品基本資料頁面
*
*/
var columnCount_freight;
var columnCount_mode;
var PRODUCT_ID, OLD_PRODUCT_ID = '';
var isChange = false;
var SAVEPANEL, COURSEPANEL;
var productInfo;///add by wwei0216w 定義一個productInfo 用來存儲查詢到的商品信息,以便其他代碼調用
//品牌Model
Ext.define("gigade.Brand", {
extend: 'Ext.data.Model',
fields: [
{ name: "brand_id", type: "string" },
{ name: "brand_name", type: "string" }]
});
//品牌store
var brandStore = Ext.create('Ext.data.Store', {
model: 'gigade.Brand',
autoLoad: true,
proxy: {
type: 'ajax',
url: "/Brand/QueryBrand?hideOffGrade=1",
noCache: false,
getMethod: function () { return 'get'; },
actionMethods: 'post',
reader: {
type: 'json',
root: 'item'
}
}
});
//productTypeStore add 2014/09/15
Ext.define("gigade.ProductTypeStore", {
extend: 'Ext.data.Model',
fields: [
{ name: "parameterCode", type: "string" },
{ name: "parameterName", type: "string" }]
});
var productTypeStore = Ext.create('Ext.data.Store', {
model: 'gigade.ProductTypeStore',
autoLoad: true,
proxy: {
type: 'ajax',
url: "/Parameter/QueryPara?paraType=product_type",
noCache: false,
getMethod: function () { return 'get'; },
actionMethods: 'post',
reader: {
type: 'json',
root: 'items'
}
}
});
//tierStore add 2015/03/26
var tierStore = Ext.create('Ext.data.Store', {
fields: [{ name: 'schedule_Id', type: 'int' },
{ name: 'desc', type: 'string' },
{ name: 'schedule_name', type: 'string' }],
idProperty: 'schedule_Id',
proxy: {
type: 'ajax',
url: "/ProductTier/GetTiersByConditon",
noCache: false,
getMethod: function () { return 'get'; },
actionMethods: 'post',
reader: {
type: 'json'
//root: 'items'
}
}
});
//課程類型 2015/03/10
Ext.define("gigade.CourseTypeStore", {
extend: 'Ext.data.Model',
fields: [{ name: 'Course_Id', type: 'int' },
{ name: 'Course_Name', type: 'string' }]
});
var courseTypeStore = Ext.create('Ext.data.Store', {
model: 'gigade.CourseTypeStore',
autoLoad: true,
proxy: {
type: 'ajax',
url: "/Course/GetCurricul?IsPage=false",
noCache: false,
//getMethod: function () { return 'get'; },
actionMethods: 'get',
reader: {
type: 'json'
}
}
});
Ext.onReady(function () {
var tomorrow = Tomorrow();
var tomRepeat = Tomorrow();
var tureorfalse = true;
PRODUCT_ID = window.parent.GetProductId();
if (PRODUCT_ID > 0) {
tureorfalse = false;
}
OLD_PRODUCT_ID = window.parent.GetCopyProductId();
SAVEPANEL = window.parent.GetSavePanel();
COURSEPANEL = window.parent.GetCoursePanel();
var baseInfo = Ext.create('Ext.form.Panel', {
id: 'baseinfo',
border: false,
autoScroll: true,
margin: '3 0 0 8',
defaults: {
labelWidth: 100,
padding: '8 0 0 0'
},
items: [{//品牌
xtype: 'combobox',
allowBlank: false,
hidden: true,
id: 'brand_id',
name: 'Brand_Id',
colName: 'brand_id',
store: brandStore,
queryMode: 'local',
displayField: 'brand_name',
valueField: 'brand_id',
typeAhead: true,
forceSelection: true,
emptyText: SELECT,
fieldLabel: BRAND + '<span style="color:red">*</span>',
listeners: {
select: function () {
if (!PRODUCT_ID) {
var brand_id = Ext.getCmp("brand_id").getValue();
Ext.Ajax.request({
url: '/Product/GetProductsortNum',
params: {
brand_id: brand_id
},
success: function (response) {
var text = response.responseText;
Ext.getCmp("product_sort").setValue(text);
}
});
}
}
}
}, {
xtype: 'panel',
columnWidth: 80,
border: 0,
layout: 'column',
items: [{
xtype: 'textfield',
id: 'Prod_name',//商品名稱
allowBlank: false,
colName: 'Product_name',
//disabled: window.parent.GetProductId() != "",//禁用 2014/09/16
hidden: true,
width: 400,
name: 'Prod_Name',
fieldLabel: PRODUCT_NAME + '<span style="color:red">*</span>'
}, {
xtype: 'textfield',
margin: '0 0 0 10',
id: 'prod_sz',//規格欄位
allowBlank: true,
//colName: 'Prod_sz',
//hidden: true,
width: 80,
maxLength: 10,
name: 'Prod_Sz'
}, {// add by zhuoqin0830w 2015/06/26 添加商品失格欄位
xtype: 'checkbox',
margin: '0 0 0 10',
boxLabel: OFF_GRADE,
id: 'off-grade',
width: 80,
colName: 'off-grade',
hidden: true
}]
}, {
xtype: 'panel',
columnWidth: .70,
border: 0,
layout: 'column',
items: [{
xtype: 'combobox',
allowBlank: false,
//hidden: true,
id: 'product_type',//商品型態 add 2014/09/15
name: 'Product_Type',
colName: 'product_type',
store: productTypeStore,
queryMode: 'local',
value: "0",//add 2014/09/18
editable: false,
displayField: 'parameterName',
valueField: 'parameterCode',
emptyText: SELECT,
fieldLabel: PRODUCT_TYPE + '<span style="color:red">*</span>',
listeners: {
change: function () {
if (Ext.getCmp('product_type').getValue() == 1) {
SAVEPANEL.insert(4, COURSEPANEL);
Ext.getCmp('course_name').allowBlank = false;
Ext.getCmp('course_name').show();
} else {
SAVEPANEL.remove(COURSEPANEL);
Ext.getCmp('course_name').allowBlank = true;
Ext.getCmp('course_name').hide();
window.parent.SetCourseId(0);
}
}
}
}, {
xtype: 'combobox',
allowBlank: true,
hidden: true,
id: 'course_name',//課程名稱 add 2013/03/10
name: 'course_name',
store: courseTypeStore,
margin: '0 0 0 10 ',
labelWidth: 70,
//editable: false,
queryMode: 'local',
typeAhead: true,
forceSelection: true,
displayField: 'Course_Name',
valueField: 'Course_Id',
emptyText: SELECT,
readOnly: PRODUCT_ID != '',
fieldLabel: CURRICULUM_NAME + '<span style="color:red">*</span>',
listeners: {
change: function () {
window.parent.SetCourseId(this.value);
}
}
}]
}, {
xtype: 'numberfield',
decimalPrecision: 0,
minValue: 0,
value: 0,
hidden: true,
id: 'product_sort',//排序
colName: 'product_sort',
allowBlank: false,
fieldLabel: PRODUCT_SORT,
name: 'Product_Sort'
}, {
xtype: 'textfield',
hidden: true,
id: 'product_vendor_code',//廠商商品編號
colName: 'product_vendor_code',
fieldLabel: PRODUCT_VENDOR_CODE,
name: 'Product_Vendor_Code'
}, {
xtype: 'panel',
hidden: true,
colName: 'product_start',//上架時間
layout: 'hbox',
id: 'product_start',
allowBlank: false,
border: false,
items: [{
xtype: 'datetimefield',
disabledMin: true,
disabledSec: true,
format: 'Y-m-d H:i:s',
id: 'p_start',
fieldLabel: PRODUCT_START,
allowBlank: false,
//labelWidth: 80,
value: tomRepeat,
margin: '0 8 0 0',
listeners: {
select: function (a, b, c) {
var Year = new Date(this.getValue()).getFullYear() + 10;
Ext.getCmp("pt_end").setValue(new Date(new Date(this.getValue()).setFullYear(Year)));
}
}
}]
}, {
xtype: 'panel',
hidden: true,
layout: 'hbox',
border: false,
id: 'product_end',
colName: 'product_end',//下架時間
items: [{
xtype: 'datetimefield',
disabledMin: true,
disabledSec: true,
format: 'Y-m-d H:i:s',
id: 'pt_end',
value: new Date(tomorrow.setFullYear(tomorrow.getFullYear() + 10)),
allowBlank: false,
fieldLabel: PRODUCT_END,
//labelWidth: 80,
margin: '0 8 0 0',
listeners: {
}
}]
}, {
xtype: 'radiogroup',
//hidden: true,
colName: 'purchase_in_advance',
id: 'purchase_in_advance',//是否預購 add by Jiajun 2015/07/30
fieldLabel: PURCHASE_IN_ADVANCE,
width: 200,
defaults: {
name: 'purchase_in_advance'
},
columns: 2,
vertical: true,
items: [
{ boxLabel: YES, inputValue: '1' },
{ boxLabel: NO, inputValue: '0', checked: true }],
listeners: {
change: function () {
if (Ext.getCmp('purchase_in_advance').getValue().purchase_in_advance == '1') {
Ext.getCmp('purchase_in_advance_start').setDisabled(false);
Ext.getCmp('blp').setDisabled(false);
Ext.getCmp('purchase_in_advance_end').setDisabled(false);
Ext.getCmp('e_time').setDisabled(false);
Ext.getCmp('e_time').allowBlank = false;
} else {
Ext.getCmp('purchase_in_advance_start').setDisabled(true);
Ext.getCmp('blp').setDisabled(true);
Ext.getCmp('purchase_in_advance_end').setDisabled(true);
Ext.getCmp('e_time').setDisabled(true);
}
}
}
}, {
xtype: 'container',
layout: 'column',
id: 'purchase_inAdvance',//預售起止時間
items: [{
xtype: 'datetimefield',
disabledMin: false,
disabledSec: false,
format: 'Y-m-d H:i:s',
id: 'purchase_in_advance_start',
fieldLabel: PURCHASE_IN_ADVANCE_TIME,
allowBlank: false,
disabled: true,
value: new Date(),
minValue: new Date(),
listeners: { ///add by wwei0216w 添加選擇時間判斷 如果預購開始時間大於預計到貨時間,則給出提示 2015/11/16
select: function (a, b, c) {
if (b > Ext.getCmp("e_time").getValue()) {
Ext.getCmp("purchase_in_advance_start").setValue("");
Ext.Msg.alert(PROMPT, EXPECT_TIME_IS_ERRORTO);
}
}
}
}, {
xtype: 'displayfield',
value: '~ ',
id: 'blp',
disabled: true,
margin: '0 5 0 5'
}, {
xtype: 'datetimefield',
disabledMin: false,
disabledSec: false,
format: 'Y-m-d H:i:s',
id: 'purchase_in_advance_end',//預計結束時間
allowBlank: false,
disabled: true,
value: tomRepeat,
minValue: new Date(),
listeners: {
select: function (a, b, c) {
var e_time = Ext.getCmp("e_time");
if ((+b/1000-86400*10) > +e_time.getValue()/1000 && e_time.getValue() != null) {
Ext.getCmp("e_time").setValue("");
Ext.Msg.alert(PROMPT, EXPECT_TIME_IS_ERROR);
}
}
}
}, {
xtype: 'datetimefield',
disabledMin: false,
disabledSec: false,
disabled: true,
editable: false,
format: 'Y-m-d H:i:s',
id: 'e_time',
fieldLabel: EXPECT_TIME,
labelWidth: 80,
margin: '0 8 0 15',
listeners: {
select: function (a, b, c) {
var purchase_in_advance_end = Ext.getCmp("purchase_in_advance_end");
if (+b/1000 < (+purchase_in_advance_end.getValue()/1000-(86400*10))) {
Ext.getCmp("e_time").setValue("");
Ext.Msg.alert(PROMPT, EXPECT_TIME_IS_ERROR);
}
if (b < Ext.getCmp("purchase_in_advance_start").getValue()) {
Ext.getCmp("e_time").setValue("");
Ext.Msg.alert(PROMPT, EXPECT_TIME_IS_ERRORTO);
}
}
}
}]
}, {
xtype: 'panel',
hidden: true,
layout: 'hbox',
border: false,
id: 'expect_time',//預計出貨時間
colName: 'expect_time',
items: [{
xtype: 'textfield',
hidden: true,
width: 300,
id: 'expect_msg',//預計出貨信息
labelWidth: 110,
fieldLabel: EXPECT_MSG,
colName: 'expect_msg',
name: 'expect_msg'
//maxLength: 80,
//maxLengthText:'此欄位最多輸入80個字'
}]
}, {
xtype: 'container',
layout: 'column',
//hidden: true,
id: 'jundge_combox',
items: [{
xtype: 'radiogroup',
id: 'recommedde_jundge',//是否推薦商品屬性 add by dongya 2015/08/17
name: 'recommedde_jundge',
fieldLabel: RECOMMENDED_JUDGE_PRODUCT,
width: 200,
defaults: {
name: 'recommedde_jundge'
},
columns: 2,
vertical: true,
items: [
{ boxLabel: YES, inputValue: '1' },
{ boxLabel: NO, inputValue: '0', checked: true }],
listeners: {
change: function () {
if (Ext.getCmp('recommedde_jundge').getValue().recommedde_jundge == '1') {
Ext.getCmp('recommedde_time').show();//如果點擊了是 則顯示
Ext.getCmp('recommedde_expend_day').show();
Ext.getCmp('checkall').show();
Ext.getCmp('noselect').show();
} else {
Ext.getCmp('recommedde_time').hide(); //如果點擊了否 則隱藏
Ext.getCmp('recommedde_expend_day').hide();
Ext.getCmp('recommedde_time').setValue(false);
Ext.getCmp('recommedde_expend_day').setValue(0);
Ext.getCmp('checkall').hide();
Ext.getCmp('noselect').hide();
}
}
}
}, {
xtype: 'numberfield',
id: 'recommedde_expend_day',
name: 'recommedde_expend_day',
fieldLabel: USED_TIME,
hidden: true,
allowBlank: false,
disabled: false,
allowDecimals: false,
width: 190,
maxValue: 1000000,
value: 0,
minValue: 0
,
listeners: {
change: function () {
if (Ext.getCmp('recommedde_jundge').getValue().recommedde_jundge == '1') {
if (Ext.getCmp('recommedde_expend_day').getValue() > 1000000) {
Ext.getCmp('recommedde_expend_day').setValue(1000000);
}
}
}
}
}, {
xtype: 'button',
text: '全選',
hidden: true,
id: 'checkall',
name: 'checkall',
margin: '0 0 0 15',
handler: function () {
if (Ext.getCmp("recommedde_jundge").getValue().recommedde_jundge == 1) {
Ext.getCmp('recommedde_time_one').setValue(true);
Ext.getCmp('recommedde_time_two').setValue(true);
Ext.getCmp('recommedde_time_three').setValue(true);
Ext.getCmp('recommedde_time_four').setValue(true);
Ext.getCmp('recommedde_time_five').setValue(true);
Ext.getCmp('recommedde_time_six').setValue(true);
Ext.getCmp('recommedde_time_seven').setValue(true);
Ext.getCmp('recommedde_time_eight').setValue(true);
Ext.getCmp('recommedde_time_nine').setValue(true);
Ext.getCmp('recommedde_time_ten').setValue(true);
Ext.getCmp('recommedde_time_eleven').setValue(true);
Ext.getCmp('recommedde_time_twelve').setValue(true);
}
}
}, {
xtype: 'button',
text: '反選',
hidden: true,
id: 'noselect',
name: 'noselect',
margin: '0 0 0 15',
handler: function () {
if (Ext.getCmp("recommedde_jundge").getValue().recommedde_jundge == 1) {
if (Ext.getCmp("recommedde_time_one").getValue() == true) {
Ext.getCmp("recommedde_time_one").setValue(false)
}
else {
Ext.getCmp("recommedde_time_one").setValue(true)
}
if (Ext.getCmp("recommedde_time_two").getValue() == true) {
Ext.getCmp("recommedde_time_two").setValue(false)
}
else {
Ext.getCmp("recommedde_time_two").setValue(true)
}
if (Ext.getCmp("recommedde_time_three").getValue() == true) {
Ext.getCmp("recommedde_time_three").setValue(false)
}
else {
Ext.getCmp("recommedde_time_three").setValue(true)
}
if (Ext.getCmp("recommedde_time_four").getValue() == true) {
Ext.getCmp("recommedde_time_four").setValue(false)
}
else {
Ext.getCmp("recommedde_time_four").setValue(true)
}
if (Ext.getCmp("recommedde_time_five").getValue() == true) {
Ext.getCmp("recommedde_time_five").setValue(false)
}
else {
Ext.getCmp("recommedde_time_five").setValue(true)
}
if (Ext.getCmp("recommedde_time_six").getValue() == true) {
Ext.getCmp("recommedde_time_six").setValue(false)
}
else {
Ext.getCmp("recommedde_time_six").setValue(true)
}
if (Ext.getCmp("recommedde_time_seven").getValue() == true) {
Ext.getCmp("recommedde_time_seven").setValue(false)
}
else {
Ext.getCmp("recommedde_time_seven").setValue(true)
}
if (Ext.getCmp("recommedde_time_eight").getValue() == true) {
Ext.getCmp("recommedde_time_eight").setValue(false)
}
else {
Ext.getCmp("recommedde_time_eight").setValue(true)
}
if (Ext.getCmp("recommedde_time_nine").getValue() == true) {
Ext.getCmp("recommedde_time_nine").setValue(false)
}
else {
Ext.getCmp("recommedde_time_nine").setValue(true)
}
if (Ext.getCmp("recommedde_time_ten").getValue() == true) {
Ext.getCmp("recommedde_time_ten").setValue(false)
}
else {
Ext.getCmp("recommedde_time_ten").setValue(true)
}
if (Ext.getCmp("recommedde_time_eleven").getValue() == true) {
Ext.getCmp("recommedde_time_eleven").setValue(false)
}
else {
Ext.getCmp("recommedde_time_eleven").setValue(true)
}
if (Ext.getCmp("recommedde_time_twelve").getValue() == true) {
Ext.getCmp("recommedde_time_twelve").setValue(false)
}
else {
Ext.getCmp("recommedde_time_twelve").setValue(true)
}
}
}
}]
}, {
xtype: 'checkboxgroup',
id: 'recommedde_time',//是否推薦商品屬性 add by dongya 2015/08/17
name: 'recommedde_time',
fieldLabel: "推薦月份設定",
hidden: true,
width: 800,
columns: 6,
vertical: true,
allowBlank: true,
items: [
{ boxLabel: '一月', id: 'recommedde_time_one', inputValue: '1' },
{ boxLabel: '二月', id: 'recommedde_time_two', inputValue: '2' },
{ boxLabel: '三月', id: 'recommedde_time_three', inputValue: '3' },
{ boxLabel: '四月', id: 'recommedde_time_four', inputValue: '4' },
{ boxLabel: '五月', id: 'recommedde_time_five', inputValue: '5' },
{ boxLabel: '六月', id: 'recommedde_time_six', inputValue: '6' },
{ boxLabel: '七月', id: 'recommedde_time_seven', inputValue: '7' },
{ boxLabel: '八月', id: 'recommedde_time_eight', inputValue: '8' },
{ boxLabel: '九月', id: 'recommedde_time_nine', inputValue: '9' },
{ boxLabel: '十月', id: 'recommedde_time_ten', inputValue: '10' },
{ boxLabel: '十一月', id: 'recommedde_time_eleven', inputValue: '11' },
{ boxLabel: '十二月', id: 'recommedde_time_twelve', inputValue: '12' }
]
//,
//listeners: {
// change: function () {
// if (Ext.getCmp('recommedde_jundge').getValue().recommedde_jundge == '1') {
// if (Ext.getCmp('recommedde_time').getChecked() == 0) {
// if (Ext.getCmp('recommedde_expend_day').getValue() > 0) {
// Ext.Msg.alert(PROMPT, MONTH_SET_NOEMPTY);//推薦週期不允許為空
// Ext.getCmp('recommedde_expend_day').setValue(0);
// }
// }
// }
// }
//}
}, {
xtype: 'panel',
layout: 'hbox',
border: false,
items: [{
xtype: 'combobox',
id: 'schedule_id',
name: 'schedule_id',
store: tierStore,//選擇排程
//margin: '0 0 0 8 ',
//labelWidth: 60,
queryMode: 'local',
editable: false,
hidden: PRODUCT_ID == '' ? true : false,
displayField: 'schedule_name',
valueField: 'schedule_Id',
emptyText: SELECT,
fieldLabel: SCHEDULE_SELECT,
listConfig: {
getInnerTpl: function () {
return '<div>{schedule_name}</div>';
}
},
listeners: {
select: function (record) {
Ext.getCmp("desc").setText(record.valueModels[0].data.desc)
}
}
}, {
xtype: 'label',
id: 'desc',
margin: '0 0 0 15'
}]
}, {
xtype: 'radiogroup',
hidden: true,
id: 'product_freight_set',//運送方式
colName: 'product_freight_set',
fieldLabel: PRODUCT_FREIGHT_SET,
width: 500,
name: 'Product_Freight_Set'
}, {//edit by zhuoqin0830w 2015/03/16
xtype: 'panel',
//hidden: true,
layout: 'hbox',
border: false,
padding: '0 0 4 0',
colName: 'product_extra_days',
id: 'product_extra_days',
items: [{
xtype: 'radiogroup',
hidden: true,
id: 'product_mode',
colName: 'product_mode',
name: 'Product_Mode',
fieldLabel: PRODUCT_MODE,
margin: '3 11 0 0',
width: 250
}, {//寄倉天數/調度天數
xtype: 'numberfield',
decimalPrecision: 0,
minValue: 0,
hidden: true,
id: 'extra_days',
margin: '1 0 0 0',
//colName: 'extra_days',
allowBlank: true,
fieldLabel: CONTROL_EXTRA_DAYS,
name: 'Extra_days',
width: 200
}]
}, {//add by zhuoqin0830w 2015/03/16
xtype: 'panel',
//hidden: true,
layout: 'hbox',
border: false,
items: [{//供應商出貨天數
xtype: 'numberfield',
decimalPrecision: 0,
minValue: 0,
value: 0,
margin: '0 35 0 0',
hidden: true,
id: 'deliver_days',
//colName: 'deliver_days',
allowBlank: false,
fieldLabel: DELIVER_DAYS,
name: 'Deliver_days',
width: 200
}, {//最小採購數量
xtype: 'numberfield',
decimalPrecision: 0,
minValue: 0,
value: 1,
hidden: true,
margin: '0 8 0 0',
id: 'min_purchase_amount',
colName: 'min_purchase_amount',
allowBlank: false,
fieldLabel: MIN_PURCHASE_AMOUNT,
name: 'Min_purchase_amount',
width: 200
}]
}, {//add by zhuoqin0830w 2015/03/16
//採購調整系數
xtype: 'numberfield',
decimalPrecision: 0,
minValue: 0,
margin: '0 35 0 0',
hidden: true,
id: 'safe_stock_amount',
value: 1,
colName: 'safe_stock_amount',
allowBlank: false,
fieldLabel: SAFE_STOCK_AMOUNT,
name: 'Safe_stock_amount',
width: 200
}, {
xtype: 'radiogroup',
hidden: true,
id: 'tax_type',//營業稅
fieldLabel: TAX_TYPE,
colName: 'tax_type',
width: 200,
defaults: {
name: 'Tax_Type'
},
columns: 2,
vertical: true,
items: [
{ boxLabel: TAX_TYPE1, inputValue: '1', checked: true },
{ boxLabel: TAX_TYPE2, inputValue: '3' }]
}, {
xtype: 'radiogroup',
hidden: true,
id: 'show_in_deliver',//顯示於出貨單中 add by Jiajun 2014/09/15
fieldLabel: SHOE_IN_DELIVER,
colName: 'show_in_deliver',
width: 200,
defaults: {
name: 'Show_In_Deliver'
},
columns: 2,
vertical: true,
items: [
{ boxLabel: YES, inputValue: '1', checked: true },
{ boxLabel: NO, inputValue: '0' }
]
}, {
xtype: 'radiogroup',
hidden: true,
id: 'prepaid',//已買斷的商品 add 2014/09/15
fieldLabel: PREPAID,
colName: 'prepaid',
width: 200,
defaults: {
name: 'Prepaid'
},
columns: 2,
vertical: true,
items: [{
boxLabel: YES, inputValue: '1', listeners: { //edit by Jiajun 2014.09.29
change: function (radio, newValue, oldValue) {
if (isChange) {
Ext.Msg.alert(INFORMATION, BAG_CHECK_PREPAID);
}
isChange = true;
}
}
},
{ boxLabel: NO, inputValue: '0', checked: true }//edit 2014/08/17
]
}, {
xtype: 'radiogroup',
hidden: true,
id: 'process_type',//配送系統 add 2014/09/15
fieldLabel: PROCESS_TYPE,
colName: 'process_type',
width: 400,
defaults: {
name: 'Process_Type'
},
columns: 4,
vertical: true,
items: [
{ boxLabel: PRO_TYPE_WL, inputValue: '0', checked: true },//0:物流配送, 1:電子郵件, 2:簡訊, 99:系統
{ boxLabel: PRO_TYPE_DZ, inputValue: '1' },
{ boxLabel: PRO_TYPE_JX, inputValue: '2' },
{ boxLabel: PRO_TYPE_XT, inputValue: '99' }
]
}, {
xtype: 'button',
iconCls: 'icon_rewind',
text: SAVE,
hidden: true,
handler: function () { }
}, {
xtype: 'displayfield',
id: 'combination',
name: 'combination',
hidden: window.parent.GetProductId() == "",
value: SILGLE_PROD,
fieldLabel: COMBINATION
}],
listeners: {
beforerender: function () {
//檢測臨時表中是否有數據
Ext.Ajax.request({
url: '/Product/QueryProduct',
method: 'post',
params: {
"product_id": window.parent.GetProductId(),
OldProductId: OLD_PRODUCT_ID
},
success: function (response) {
//判斷是單一商品新增還是修改 add by zhuoqin0830w 2015/06/30
if (window.parent.GetProductId() == "") {
Ext.getCmp("off-grade").hide();
}
//商品複製
var reStr = eval("(" + response.responseText + ")");
if (reStr.data != null && window.parent.GetProductId() == "" && OLD_PRODUCT_ID == '') {
window.parent.Is_Continue();
//去掉右上角關閉按鈕
}
else {
Page_Load();
}
}
});
}
}
});
Ext.create('Ext.Viewport', {
layout: 'fit',
items: [baseInfo],
border: false,
style: {
padding: '5 0 0 5'
},
renderTo: Ext.getBody(),
autoScroll: true,
listeners: {
resize: function () {
this.doLayout();
},
afterrender: function () {
window.parent.updateAuth(baseInfo, 'colName');
}
}
});
//運送方式
var product_freight = Ext.get("freight").dom.value;
Ext.getCmp("product_freight_set").update(product_freight);
//var extra_days = Ext.getCmp("extra_days");
//出貨方式
var product_mode = Ext.get("mode").dom.value;
Ext.getCmp("product_mode").update(product_mode);
$(":radio[name='product_mode']").bind('click', function () {
if (this.checked && this.value != '2') {
Ext.Msg.alert(INFORMATION, BAG_CHECK_INFORMATION);
}
});
});
//時間 edit by jiajun 2014/12/31
function Tomorrow() {
var d;
d = new Date(); // 创建 Date 对象。
d.setDate(d.getDate() + 1);
return d;
}
//頁面加載
function Page_Load() {
/**/
$("#off-grade input[type=button]").click(function () {
var off_grade = Ext.getCmp('off-grade');
var oldValue = off_grade.getValue();
Ext.Msg.confirm(ALERT_MESSAGE, AFFIRM_FIX,
function (button) {
if (button == 'no') {
off_grade.setValue(!oldValue);
}
});
});
$(".x-tool-close").show();
Ext.getCmp("baseinfo").getForm().load({
type: 'ajax',
url: '/Product/QueryProduct',
actionMethods: 'post',
params: {
"ProductId": Ext.htmlEncode(window.parent.GetProductId()),
OldProductId: OLD_PRODUCT_ID
},
success: function (response, opts) {
var resText = eval("(" + opts.response.responseText + ")");
productInfo = resText;//給productInfo賦值,用於其他代碼的條件
tierStore.load({
params: { 'vendorId': productInfo.data.Vendor_Id, 'product_id': productInfo.data.Product_Id },
callback: function (record, operation, success) {
//Ext.getCmp("schedule_id").setValue(tierStore.getAt(0).data.schedule_Id);
tierStore.insert(0, { schedule_Id: '0', schedule_name: SCHEDULE_CANCEL });
}
});
if (OLD_PRODUCT_ID)
Ext.getCmp('brand_id').fireEvent('select');
if (resText.data.Product_Start != "0") {
var date_start = new Date(resText.data.Product_Start * 1000);
Ext.getCmp("p_start").setValue(date_start);
}
if (resText.data.Product_End != "0") {
var date_end = new Date(resText.data.Product_End * 1000);
Ext.getCmp("pt_end").setValue(date_end);
}
if (resText.data.Expect_Time != "0") {
var expect_time = new Date(resText.data.Expect_Time * 1000);
Ext.getCmp("e_time").setValue(expect_time);
}
//add by Jiajun 2014.09.30
if (resText.data.Product_Status != "0") { // 商品狀態為 新建立商品時 商品型態 和 配送系統 可以修改 反之則 不能
Ext.getCmp("process_type").disable(true);
Ext.getCmp("product_type").disable(true);
}
//add by zhuoqin0830w 2015/06/25 下架和下架不販售才會顯示失格
if (resText.data.Product_Status != 6 && resText.data.Product_Status != 99) {
Ext.getCmp("off-grade").setDisabled(true);
}
Ext.getCmp("off-grade").setValue(resText.data.off_grade);
$("#product_freight" + resText.data.Product_Freight_Set + "").attr("checked", "checked");
$("#product_mode" + resText.data.Product_Mode + "").attr("checked", "checked");
$("#tax" + resText.data.Tax_Type + "").attr("checked", "checked");
Ext.getCmp("tax_type").setValue(resText.data.Tax_Type);
//add 2014/09/16
Ext.getCmp("show_in_deliver").setValue(resText.data.Show_In_Deliver);//顯示於出貨單中
if (resText.data.Prepaid == 0) {
isChange = true;
}
Ext.getCmp("prepaid").setValue(resText.data.Prepaid);//已買斷商品
Ext.getCmp("process_type").setValue(resText.data.Process_Type);//配送系統
Ext.getCmp("product_type").setValue(resText.data.Product_Type);//商品形態
if (PRODUCT_ID != '') { //add 2014/04
if (Ext.getCmp('product_type').getValue() != 1) { //商品型態 為 課程 時 商品型態 才會有 課程選項 反之 則 沒有
productTypeStore.removeAt(productTypeStore.find('parameterCode', 1));
}
}
Ext.getCmp("schedule_id").setValue(resText.data.Schedule_Id);//排程ID
if (Ext.getCmp("schedule_id") && Ext.getCmp("schedule_id").getValue() != 0 || Ext.getCmp("schedule_id").getValue() != null) { //add 2014/04/22
Ext.getCmp("desc").setText(resText.data.Desc)
}
//Ext.getCmp("Prod_name").setValue(resText.data.Prod_Name_Simple);
//add 2014/11/18
Ext.getCmp("prod_sz").setValue(resText.data.Prod_Sz);
window.parent.SetCourseId(resText.data.Course_Id);
Ext.getCmp("course_name").setValue(resText.data.Course_Id);//課程
//add by zhuoqin0830w 2015/03/16 商品基本資料新增欄位
Ext.getCmp("deliver_days").setValue(resText.data.Deliver_Days);//供應商出貨天數
Ext.getCmp("min_purchase_amount").setValue(resText.data.Min_Purchase_Amount);//最小採購數量
Ext.getCmp("safe_stock_amount").setValue(resText.data.Safe_Stock_Amount);//安全存量細數
//Ext.getCmp("extra_days").setValue(resText.data.Extra_Days);//寄倉天數/調度天數
//add by Jiajun 2015/07/30
Ext.getCmp("purchase_in_advance").setValue({ "purchase_in_advance": resText.data.purchase_in_advance });
if (resText.data.purchase_in_advance_start != '0') {
Ext.getCmp("purchase_in_advance_start").setValue(new Date(resText.data.purchase_in_advance_start * 1000));
} else {
Ext.getCmp("purchase_in_advance_start").setValue(new Date());
}
if (resText.data.purchase_in_advance_end != '0') {
Ext.getCmp("purchase_in_advance_end").setValue(new Date(resText.data.purchase_in_advance_end * 1000));
} else {
Ext.getCmp("purchase_in_advance_end").setValue(Tomorrow());
}
//add by dongya 2015/08/17
if (resText.data.expend_day == 0 && resText.data.months == "") {
Ext.getCmp("recommedde_jundge").setValue({ "recommedde_jundge": 0 });
Ext.getCmp('recommedde_time').hide();//如果點擊的是否,則不顯示
Ext.getCmp('recommedde_expend_day').hide();
}
else {
Ext.getCmp('recommedde_time').show();//如果點擊的是否,則不顯示
Ext.getCmp('recommedde_expend_day').show();
Ext.getCmp("recommedde_jundge").setValue({ "recommedde_jundge": 1 });
var arraylist = resText.data.months.split(',');
for (var a = 0; a < arraylist.length; a++) {
if (arraylist[a] == 1) {
Ext.getCmp("recommedde_time_one").setValue(true);
}
if (arraylist[a] == 2) {
Ext.getCmp("recommedde_time_two").setValue(true);
}
if (arraylist[a] == 3) {
Ext.getCmp("recommedde_time_three").setValue(true);
}
if (arraylist[a] == 4) {
Ext.getCmp("recommedde_time_four").setValue(true);
}
if (arraylist[a] == 5) {
Ext.getCmp("recommedde_time_five").setValue(true);
}
if (arraylist[a] == 6) {
Ext.getCmp("recommedde_time_six").setValue(true);
}
if (arraylist[a] == 7) {
Ext.getCmp("recommedde_time_seven").setValue(true);
}
if (arraylist[a] == 8) {
Ext.getCmp("recommedde_time_eight").setValue(true);
}
if (arraylist[a] == 9) {
Ext.getCmp("recommedde_time_nine").setValue(true);
}
if (arraylist[a] == 10) {
Ext.getCmp("recommedde_time_ten").setValue(true);
}
if (arraylist[a] == 11) {
Ext.getCmp("recommedde_time_eleven").setValue(true);
}
if (arraylist[a] == 12) {
Ext.getCmp("recommedde_time_twelve").setValue(true);
}
}
Ext.getCmp("recommedde_expend_day").setValue(resText.data.expend_day);
}
}
});
/**/
}
//驗證表單
function validateForm(product_start, product_end, expect_time, purchase_in_advance_start, purchase_in_advance_end) {
if (!Ext.getCmp('baseinfo').getForm().isValid()) {
return;
}
if (!Ext.getCmp("brand_id").isValid() || Ext.getCmp("brand_id").getValue() == SELECT) {
Ext.Msg.alert(PROMPT, BRAND_NOT_NULL);
return;
}
if (!Ext.getCmp("Prod_name").isValid()) {
Ext.Msg.alert(PROMPT, PRODUCT_NAME_NOT_NULL);
return;
}
if (!Ext.getCmp("product_sort").isValid()) {
Ext.Msg.alert(PROMPT, PRDUCT_SORT);
return;
}
if (!Ext.getCmp("product_vendor_code").isValid()) {
Ext.Msg.alert(PROMPT, PRODUCT_VENDOR_CODE_NOT_NULL);
return;
}
//add 2014/09/15
if (!Ext.getCmp("product_type").isValid()) {
Ext.Msg.alert(PROMPT, PRODUCT_TYPE_NOT_NULL);
return;
}
if (window.parent.GetProductId() == "") {
if (Ext.getCmp("p_start").rawValue != "" && product_start < new Date()) {
Ext.Msg.alert(PROMPT, PRODUCT_START_LIMIT);
return;
}
if (Ext.getCmp("pt_end").rawValue != "" && product_end < new Date()) {
Ext.Msg.alert(PROMPT, PRODUCT_END_LIMIT);
return;
}
if (Ext.getCmp("e_time").rawValue != "" && expect_time < new Date()) {
Ext.Msg.alert(PROMPT, EXPECT_TIME_LIMIT);
return;
}
}
if (product_end != "0" && product_end < product_start) {
Ext.Msg.alert(PROMPT, START_END_LIMIT);
return;
}
//add by Jiajun 2015/07/30
if (Ext.getCmp('purchase_in_advance').getValue().purchase_in_advance == '1') {
if (purchase_in_advance_start >= purchase_in_advance_end) {
Ext.Msg.alert(PROMPT, START_END_LIMIT_INADVANCE);
return;
}
}
//若填寫預計出貨時間則預計出貨信息必填
//if (Ext.getCmp("e_time").rawValue != "") {
// if (Ext.getCmp("expect_msg").getValue() == "") { Ext.Msg.alert(PROMPT, PLEASE_WRITE_SHIPMENT_MESSAGE); return; }
//}
//add by dongya 2015/08/25
if (Ext.getCmp("recommedde_jundge").getValue().recommedde_jundge == 1) {
if (Ext.getCmp('recommedde_time').getChecked() == 0 || Ext.getCmp("recommedde_expend_day").getValue() < 0) {
Ext.Msg.alert(PROMPT, MONTH_SET_USED_TIME_NOEMPTY);
return;
}
}
return true;
}
//保存表單
function save(functionid) {
//添加 遮罩層 避免用戶多次點擊 edit by zhuoqin0830w 2015/09/24
var mask;
if (!mask) {
mask = new Ext.LoadMask(Ext.getBody(), { msg: '請稍等...' });
}
mask.show();
var product_start = "0";
var product_end = "0";
var expect_time = "0";
if (Ext.getCmp("p_start").rawValue != "") {
product_start = Ext.getCmp("p_start").rawValue;
}
if (Ext.getCmp("pt_end").rawValue != "") {
product_end = Ext.getCmp("pt_end").rawValue;
}
if (Ext.getCmp("e_time").rawValue != "") {
expect_time = Ext.getCmp("e_time").rawValue;
}
//add by Jiajun 2014/07/30
purchase_in_advance_start = Ext.getCmp("purchase_in_advance_start").getValue() / 1000;
purchase_in_advance_end = Ext.getCmp("purchase_in_advance_end").getValue() / 1000;
var retVal = true;
if (!validateForm(product_start, product_end, expect_time, purchase_in_advance_start, purchase_in_advance_end)) {
window.parent.setMoveEnable(true);
mask.hide();
return false;
} else {//添加disabled屬性 避免用戶多次點擊 edit by zhuoqin0830w 2015/09/24
window.parent.setMoveEnable(false);
}
if (!functionid) {
functionid = '';
}
//add by dongya 2015/08/26
var recommededcheckall = "";
if (Ext.getCmp("recommedde_jundge").getValue().recommedde_jundge == 1) {
if (Ext.getCmp("recommedde_time_one").getValue() == true) {
recommededcheckall = recommededcheckall + "1,";
}
if (Ext.getCmp("recommedde_time_two").getValue() == true) {
recommededcheckall = recommededcheckall + "2,";
}
if (Ext.getCmp("recommedde_time_three").getValue() == true) {
recommededcheckall = recommededcheckall + "3,";
}
if (Ext.getCmp("recommedde_time_four").getValue() == true) {
recommededcheckall = recommededcheckall + "4,";
}
if (Ext.getCmp("recommedde_time_five").getValue() == true) {
recommededcheckall = recommededcheckall + "5,";
}
if (Ext.getCmp("recommedde_time_six").getValue() == true) {
recommededcheckall = recommededcheckall + "6,";
}
if (Ext.getCmp("recommedde_time_seven").getValue() == true) {
recommededcheckall = recommededcheckall + "7,";
}
if (Ext.getCmp("recommedde_time_eight").getValue() == true) {
recommededcheckall = recommededcheckall + "8,";
}
if (Ext.getCmp("recommedde_time_nine").getValue() == true) {
recommededcheckall = recommededcheckall + "9,";
}
if (Ext.getCmp("recommedde_time_ten").getValue() == true) {
recommededcheckall = recommededcheckall + "10,";
}
if (Ext.getCmp("recommedde_time_eleven").getValue() == true) {
recommededcheckall = recommededcheckall + "11,";
}
if (Ext.getCmp("recommedde_time_twelve").getValue() == true) {
recommededcheckall = recommededcheckall + "12,";
}
}
//儲存數據
Ext.Ajax.request({
url: '/Product/SaveBaseInfo',
method: 'POST',
async: window.parent.GetProductId() == '' ? false : true,
params: {
OldProductId: OLD_PRODUCT_ID,
"product_id": Ext.htmlEncode(window.parent.GetProductId()),
"brand_id": Ext.htmlEncode(Ext.getCmp("brand_id").getValue()),
"prod_name": Ext.htmlEncode(Ext.getCmp("Prod_name").getValue()),
"product_sort": Ext.htmlEncode(Ext.getCmp("product_sort").getValue()),
"product_vendor_code": Ext.htmlEncode(Ext.getCmp("product_vendor_code").getValue()),
"product_start": product_start,
"product_end": product_end,
"expect_time": expect_time,
"product_freight_set": Ext.htmlEncode($(":radio[name='product_freight']:checked")[0].value),
"product_mode": Ext.htmlEncode($(":radio[name='product_mode']:checked")[0].value),
"tax_type": Ext.htmlEncode(Ext.getCmp("tax_type").getValue().Tax_Type),
"expect_msg": Ext.htmlEncode(Ext.getCmp('expect_msg').getValue()),
//add 2014/09/15
"show_in_deliver": Ext.htmlEncode(Ext.getCmp("show_in_deliver").getValue().Show_In_Deliver),
"prepaid": Ext.htmlEncode(Ext.getCmp("prepaid").getValue().Prepaid),
"process_type": Ext.htmlEncode(Ext.getCmp("process_type").getValue().Process_Type),
"product_type": Ext.htmlEncode(Ext.getCmp("product_type").getValue()),
//add 2014/11/18
"Prod_Sz": Ext.htmlEncode(Ext.getCmp("prod_sz").getValue()),
//add 2015/03/10
"course_id": Ext.htmlEncode(Ext.getCmp("course_name").getValue()),
//add 2015/03/26
"schedule_id": Ext.htmlEncode(Ext.getCmp("schedule_id").getValue()),
"function": functionid,
"batch": window.parent.GetBatchNo(),
//add by zhuoqin0830w 增加新的欄位 2015/03/17
"deliver_days": Ext.htmlEncode(Ext.getCmp("deliver_days").getValue()),
"min_purchase_amount": Ext.htmlEncode(Ext.getCmp("min_purchase_amount").getValue()),
"safe_stock_amount": Ext.htmlEncode(Ext.getCmp("safe_stock_amount").getValue()),
//add by zhuoqin0830w 2015/06/25
"off-grade": Ext.getCmp("off-grade").getValue() ? 1 : 0,
//add by Jiajun 2014/07/30
"purchase_in_advance": Ext.htmlEncode(Ext.getCmp("purchase_in_advance").getValue().purchase_in_advance),
"purchase_in_advance_start": purchase_in_advance_start,
"purchase_in_advance_end": purchase_in_advance_end,
//add by dongya 2015/08/17
"recommedde_jundge": Ext.htmlEncode(Ext.getCmp("recommedde_jundge").getValue().recommedde_jundge),
"recommededcheckall": recommededcheckall,
"recommedde_expend_day": Ext.htmlEncode(Ext.getCmp("recommedde_expend_day").getValue())
}, success: function (msg) {
var resMsg = eval("(" + msg.responseText + ")");
mask.hide();
if (resMsg.success == true && resMsg.msg != null) {
Ext.Msg.alert(PROMPT, resMsg.msg);
}
if (resMsg.success == false) {
Ext.Msg.alert(PROMPT, resMsg.msg);
retVal = false;
}
window.parent.setMoveEnable(true);
}
});
return retVal;
} |
import axios from 'axios'
import router from '../router/index'
import Cookies from 'js-cookie'
//request header 根据需求添加
// axios.defaults.baseURL = 'http://test.178lottery.com';
// axios.defaults.headers.post['encryptDisable'] = true;
// axios.defaults.headers.post['Content-Type'] = 'application/x-www-form-urlencoded';
// 添加请求拦截器
axios.interceptors.request.use(function (config) {
//全局加token
let token=localStorage.getItem('token');
if(token){
config.headers.Authorization=token;
}
return config;
}, function (error) {
// 对请求错误做些什么
return Promise.reject(error);
});
// 添加响应拦截器
axios.interceptors.response.use(function (response) {
// 对响应数据做点什么
if (response.data.errorCode === 24 && response.data.errorMsg === "需要登录") {
alert("身份过期，请先登录");
setTimeout(() => {
router.push('/login')
}, 1500)
} else {
return response;
}
}, function (error) {
// 对响应错误做点什么
return Promise.reject(error);
});
export default axios |
import React, { useEffect, useState } from 'react';
import './App.scss';
//import de React Router
import { BrowserRouter as Router, Switch, Route, Link } from 'react-router-dom';
//iport des composants
import Nav from './Component/Nav';
import Popular from './Component/Popular';
import Upcoming from './Component/Upcoming';
import Landingpage from './Component/Landingpage';
import Filmdetails from './Component/Filmdetails';
function App() {
return (
<Router>
<div className="App">
<Nav />
<Switch>
{/* Switch permettant de faire la navigation entres les pages */}
<Route path="/" exact component={Landingpage} />
<Route path="/Popular" exact component={Popular} />
<Route path="/Popular/:id" component={Filmdetails} />
<Route path="/upcoming" exact component={Upcoming} />
<Route path="/upcoming/:id" component={Filmdetails} />
<Route path="/Recherche" exact component={Filmdetails} />
<Route path="/Recherche/:id" component={Filmdetails} />
</Switch>
</div>
</Router>
);
}
export default App;
|
import React from 'react';
import {
map,
get,
size,
} from 'lodash';
import { Link } from 'react-router-dom';
import { loadAds } from '../api/ads';
import Pager from './Pager';
import Ad from './Ad';
import styles from './Ads.css';
export default class Ads extends React.Component {
constructor(props) {
super(props);
this.state = {};
}
componentWillMount() {
loadAds().then(res => this.setState(() => res));
}
render() {
const index = get(this.props, 'match.params.id', 1) - 1;
if (this.state.data && size(this.state.data) < index + 1) {
return <span>Wrong url param</span>;
}
const data = get(this.state.data, [index]);
if (data) {
const {
ads,
page,
total_pages: totalPage,
} = data;
return (
<div className={styles.ads}>
<div className={styles.grid}>
{ads.map(ad => <Ad key={ad.id} {...ad}/>)}
</div>
<Pager page={page} total={totalPage} />
</div>
);
}
return <span>Loading...</span>;
}
}
|
var app = {
showAlert: function (message, title) {
if (navigator.notification) {
navigator.notification.alert(message, null, title, 'OK');
} else {
alert(title ? (title + ": " + message) : message);
}
},
registerEvents: function() {
var self = this;
if ( 'ontouchstart' in document.documentElement ) {
// ... if yes: register touch event listener to change the "selected" state of the item
$('body').on('touchstart', 'a', function(event) {
$(event.target).parent().addClass("tapme");
});
$('body').on('touchend', 'a', function(event) {
$(event.target).parent().removeClass("tapme");
});
$('body').on('touchend', '.shape-select', function(e){
if( $(e.target).attr('data-select') == "false" ){
$( e.target ).addClass("selected");
$( e.target ).attr("data-select", "true" );
self.addshapes[self.shape_count] = $( e.target ).attr('data-val');
self.shape_count++;
} else {
$( e.target ).removeClass("selected");
$( e.target ).attr("data-select", "false" );
self.shape_remove = $( e.target ).attr('data-val');
self.shape_del = self.addshapes.indexOf( self.shape_remove );
self.addshapes.splice(self.shape_del, 1);
self.shape_count--;
}
//console.log( self.addshapes );
});
$('body').on('touchend', '.color-select',function(e){
if( $(e.target).attr('data-select') == "false" ){
$( e.target ).addClass("selected");
$( e.target ).attr("data-select", "true" );
self.addcolors[self.color_count] = $( e.target ).attr('data-val');
self.color_count++;
} else {
$( e.target ).removeClass("selected");
$( e.target ).attr("data-select", "false" );
self.color_remove = $( e.target ).attr('data-val');
self.color_del = self.addcolors.indexOf( self.color_remove );
self.addcolors.splice(self.color_del, 1);
self.color_count--;
}
//console.log( self.addcolors );
});
$('body').on('touchend', '.check-selection-1',function(e){
console.log(e);
if( self.addshapes.length == 0 || self.addcolors.length == 0 ){
//Arrays are empty - no bueno
app.showAlert("Please select shapes and colors before continuing", "Error");
} else {
//Do something with the arrays and sent to time view
var presets = JSON.parse(window.localStorage.getItem("presets"));
var count = presets.length;
var new_preset = {"id": count + 1,
"preset_name":"Temp",
"preset_shapes":self.addshapes,
"preset_colors":self.addcolors,
"preset_total_time":"0",
"preset_image_time":"0",
"preset_down_time":"0"
};
$('.shape-select').each(function(){ $( this ).attr('data-select', "false"); });
$('.color-select').each(function(){ $( this ).attr('data-select', "false"); });
self.shape_count = 0;
self.color_count = 0;
self.addshapes = [];
self.addcolors = [];
self.store.createTempPreset( new_preset, function(answer){
if( answer ){
self.el = '';
location.hash = "#CST";
} else {
app.showAlert("Error creating new preset", "Sorry!");
}
});
}
});
$('body').on('touchstart', '.changetime', function(e){
var action = $( this ).attr('data-action');
var inc = $( this ).attr('data-inc');
var sendto = $( this ).attr('data-send');
if( action == "add" ){
self.mousedown = true;
self.increment('add', sendto, inc);
}else{
self.mousedown = true;
self.increment('sub', sendto, inc);
}
});
$('body').on('touchend', '.changetime', function(e){
self.mousedown = false;
});
$('body').on('touchend', '.complete-selection',function(e){
console.log( $('.complete-selection').html() );
var preset_name = $('#preset_name').val();
var total_time = $('#total_time').val();
var flash_time = $('#flash_time').val();
var down_time = $('#down_time').val();
self.saveNewPreset(preset_name, total_time, flash_time, down_time, false);
});
$('body').on('touchend', '.save-run-selection',function(e){
var preset_name = $('#preset_name').val();
var total_time = $('#total_time').val();
var flash_time = $('#flash_time').val();
var down_time = $('#down_time').val();
self.saveNewPreset(preset_name, total_time, flash_time, down_time, true);
});
$(window).on('hashchange', $.proxy(this.route, this));
} else {
// ... if not: register mouse events instead
$('body').on('mousedown', 'a', function(event) {
$(event.target).parent().addClass("tapme");
});
$('body').on('mouseup', 'a', function(event) {
$(event.target).parent().removeClass("tapme");
});
$('body').on('mouseup', '.shape-select', function(e){
if( $(e.target).attr('data-select') == "false" ){
$( e.target ).addClass("selected");
$( e.target ).attr("data-select", "true" );
self.addshapes[self.shape_count] = $( e.target ).attr('data-val');
self.shape_count++;
} else {
$( e.target ).removeClass("selected");
$( e.target ).attr("data-select", "false" );
self.shape_remove = $( e.target ).attr('data-val');
self.shape_del = self.addshapes.indexOf( self.shape_remove );
self.addshapes.splice(self.shape_del, 1);
self.shape_count--;
}
//console.log( self.addshapes );
});
$('body').on('mouseup', '.color-select',function(e){
if( $(e.target).attr('data-select') == "false" ){
$( e.target ).addClass("selected");
$( e.target ).attr("data-select", "true" );
self.addcolors[self.color_count] = $( e.target ).attr('data-val');
self.color_count++;
} else {
$( e.target ).removeClass("selected");
$( e.target ).attr("data-select", "false" );
self.color_remove = $( e.target ).attr('data-val');
self.color_del = self.addcolors.indexOf( self.color_remove );
self.addcolors.splice(self.color_del, 1);
self.color_count--;
}
//console.log( self.addcolors );
});
$('body').on('mouseup', '.check-selection-1',function(e){
if( self.addshapes.length == 0 || self.addcolors.length == 0 ){
//Arrays are empty - no bueno
app.showAlert("Please select shapes and colors before continuing", "Error");
} else {
//Do something with the arrays and sent to time view
var presets = JSON.parse(window.localStorage.getItem("presets"));
var count = presets.length;
var new_preset = {"id": count + 1,
"preset_name":"Temp",
"preset_shapes":self.addshapes,
"preset_colors":self.addcolors,
"preset_total_time":"0",
"preset_image_time":"0",
"preset_down_time":"0"
};
$('.shape-select').each(function(){ $( this ).attr('data-select', "false"); });
$('.color-select').each(function(){ $( this ).attr('data-select', "false"); });
self.shape_count = 0;
self.color_count = 0;
self.addshapes = [];
self.addcolors = [];
self.store.createTempPreset( new_preset, function(answer){
if( answer ){
self.el = '';
location.hash = "#CST";
} else {
app.showAlert("Error creating new preset", "Sorry!");
}
});
}
});
$('body').on('mousedown', '.changetime', function(e){
var action = $( this ).attr('data-action');
var inc = $( this ).attr('data-inc');
var sendto = $( this ).attr('data-send');
if( action == "add" ){
self.mousedown = true;
self.increment('add', sendto, inc);
}else{
self.mousedown = true;
self.increment('sub', sendto, inc);
}
});
$('body').on('mouseup', '.changetime', function(e){
self.mousedown = false;
});
$('body').on('mouseup', '.complete-selection',function(e){
console.log( $('.complete-selection').html() );
var preset_name = $('#preset_name').val();
var total_time = $('#total_time').val();
var flash_time = $('#flash_time').val();
var down_time = $('#down_time').val();
self.saveNewPreset(preset_name, total_time, flash_time, down_time, false);
});
$('body').on('mouseup', '.save-run-selection',function(e){
var preset_name = $('#preset_name').val();
var total_time = $('#total_time').val();
var flash_time = $('#flash_time').val();
var down_time = $('#down_time').val();
self.saveNewPreset(preset_name, total_time, flash_time, down_time, true);
});
$(window).on('hashchange', $.proxy(this.route, this));
}
},
saveNewPreset: function(preset_name, total_time, flash_time, down_time, run){
var self = this;
if( total_time == 0 || flash_time == 0 || down_time == 0 ){
//Arrays are empty - no bueno
app.showAlert("Please select times before continuing", "Error");
} else {
//Do something with the arrays and sent to time view
//location.hash = "#CST";
var temp = JSON.parse(window.localStorage.getItem("temp_preset"));
console.log( temp );
temp.preset_name = preset_name;
temp.preset_total_time = total_time;
temp.preset_image_time = flash_time;
temp.preset_down_time = down_time;
this.store.editTempPreset(temp, function(answer){
if( answer ){
//save
self.store.savePreset( temp, function(finish){
if( finish ){
//Done
app.showAlert("Done Saving", "Success!");
setTimeout( function(){
window.localStorage.removeItem("temp_preset");
if( run === true ){
location.hash = "#SEQ";
} else {
location.hash = "#HOME";
}
}, 1000);
}else{
//Error saving
app.showAlert("Error Saving", "Sorry!");
}
});
} else {
//error
app.showAlert("Error Saving", "Sorry!");
}
});
}
},
increment: function(act, sendto, inc){
var self = this;
if( this.mousedown ){
if( act == "add" ){
var curr = $(sendto).val();
curr = Number(curr) + Number(inc);
curr = Math.round(curr * 100) / 100;
$(sendto).val(curr);
} else {
var curr = $(sendto).val();
if( curr > 0 ){
curr = Number(curr) - Number(inc);
curr = Math.round(curr * 100) / 100;
$(sendto).val(curr);
}
}
setTimeout(function(){ self.increment(act, sendto, inc); }, 100);
}
},
route: function() {
var self = this;
var hash = window.location.hash;
if (!hash) {
//this.slider.slidePage(new HomeView().renderPage().el);
} else if (hash == "#Home") {
this.slider.slidePage(new HomeView().renderPage().el);
} else if ( hash == "#HOME" ) {
this.slider.slidePageFrom(new HomeView().renderPage().el, 'left');
} else if ( hash == "#SETTINGS" ) {
this.slider.slidePage(new SettingsView().renderPage().el);
} else if ( hash == "#STARTER" ) {
this.slider.slidePage( new StarterView(this.store).renderPage().el );
} else if ( hash == "#ABOUT" ) {
this.slider.slidePage(new AboutView(this.store).renderPage().el);
} else if ( hash == "#SAVED" ) {
this.slider.slidePage(new SavedSeqView(this.store).renderPage().el);
} else if ( hash == "#CS1" ) {
this.slider.slidePage(new CreateSeqOne().renderPage().el);
} else if ( hash == "#CSS" ) {
this.slider.slidePage(new CreateSeqShapes(this.store).renderPage().el);
} else if ( hash == "#CSA" ) {
this.slider.slidePage(new CreateSeqArrows(this.store).renderPage().el);
} else if ( hash == "#CST" ) {
this.slider.slidePage(new CreateSeqTime(this.store).renderPage().el);
} else if ( hash == "#SEQ" ) {
this.slider.slidePage(new SequenceView(this.store).renderPage().el);
this.countdown();
}
this.stopcountdown(this.s, 'all');
},
countdown: function(){
console.log("Countdown Initiated");
var self = this;
var s = 5;
var cd = setInterval( function(){
if( s > 0 ) {
$('#counter').html(s);
s--;
} else {
self.stopcountdown(cd, 'countdown');
}
}, 1000);
},
stopcountdown: function( interval, action ) {
console.log("Countdown Stopped");
clearInterval(interval);
if( action == 'countdown' ) {
$('#counter').html("Go!");
this.startsequence();
} else if( action == 'sequence' ){
$('#counter').html("Done");
setTimeout(function(){
window.localStorage.removeItem("chosenpreset");
location.hash = "#STARTER";
}, 1500);
}
},
startsequence: function(){
var self = this;
var seq = JSON.parse(window.localStorage.getItem("chosenpreset"));
console.log( seq );
this.t = '';
this.s = 0;
this.s_max = seq.preset_total_time;
this.i = 0;
this.i_max = seq.preset_image_time;
this.d = 0;
this.d_max = seq.preset_down_time;
this.t = null;
this.n = 0;
this.c = 0;
this.rest = false;
this.shapes = seq.preset_shapes;
this.colors = seq.preset_colors;
this.t = setInterval(function(){
if( self.s >= self.s_max ){
self.stopcountdown( self.t, 'sequence');
} else {
self.s = self.s + 0.10;
self.s = Math.round(self.s * 100) / 100;
// $('.show').html( self.s );
if(!self.rest) {
self.i = self.i + 0.10;
self.i = Math.round(self.i * 100) / 100;
if( self.i < self.i_max ){
$('#counter').html(self.shapeme(self.shapes[self.n], self.colors[self.c] ));
} else if( self.i == self.i_max){
$('#counter').html("");
// self.n = Math.floor((Math.random() * self.shapes.length));
self.n = self.makeUniqueRandom(self.shapes.length);
self.c = self.makeUniqueRandomColors(self.colors.length);
self.i = 0;
self.rest = true;
}
} else {
if( self.d < self.d_max ){
self.d = self.d + 0.10;
self.d = Math.round(self.d * 100) / 100;
} else if( self.d == self.d_max ) {
self.rest = false;
self.d = 0;
}
}
}
}, 100);
},
makeUniqueRandom: function(numRandoms){
if (!this.uniqueRandoms.length) {
for (var i = 0; i < numRandoms; i++) {
this.uniqueRandoms.push(i);
}
}
var index = Math.floor(Math.random() * this.uniqueRandoms.length);
var val = this.uniqueRandoms[index];
// now remove that value from the array
this.uniqueRandoms.splice(index, 1);
return val;
},
makeUniqueRandomColors: function(numRandoms){
if (!this.uniqueRandomColors.length) {
for (var i = 0; i < numRandoms; i++) {
this.uniqueRandomColors.push(i);
}
}
var index = Math.floor(Math.random() * this.uniqueRandomColors.length);
var val = this.uniqueRandomColors[index];
// now remove that value from the array
this.uniqueRandomColors.splice(index, 1);
return val;
},
shapeme: function(str, color) {
console.log("Shape Me: " + str + " " + color);
var result;
return '<div class="'+str+" font-"+color+'"></div>';
},
initialize: function() {
var self = this;
location.hash = "#Home";
this.t = '';
this.s = 0;
this.s_max = 0;
this.i = 0;
this.i_max = 0;
this.d = 0;
this.d_max = 0;
this.t = null;
this.n = 0;
this.rest = false;
this.shape_count = 0;
this.color_count = 0;
this.addshapes = [];
this.addcolors = [];
this.shape_remove;
this.shape_del;
this.color_remove;
this.color_del;
this.mousedown = false;
this.uniqueRandoms = [];
this.uniqueRandomColors = [];
this.registerEvents();
this.slider = new PageSlider($("body"));
this.store = new LocalStorageStore(function() {
self.route();
});
}
};
app.initialize();
$(function(){
});
/*
|*********************
| * Handlebar Helpers
|*********************
**/
Handlebars.registerHelper("formatMinutes", function(mytime) {
var result;
if( mytime > 60 ) {
result = mytime / 60;
result = result + " min";
} else {
result = mytime + " sec";
}
return result;
});
Handlebars.registerHelper("formatshapes", function(shapes, options) {
var d = '';
var o = '';
for( var i = 0; i < shapes.length; i++ ) {
d = d + '<div class="small-'+shapes[i]+'"></div>';
}
return new Handlebars.SafeString(d);
});
|
import React from 'react'
import authentication from '../services/authentication'
import {Link} from 'react-router'
const styles = {
error: {
color: '#FF0000',
marginTop: '15px',
},
};
const Login = React.createClass({
contextTypes: {
router: React.PropTypes.object.isRequired,
},
getInitialState() {
return {error: false}
},
onSubmitLogin(event) {
event.preventDefault();
const email = this.refs.username.value;
const pass = this.refs.password.value;
authentication.login(email, pass, (loggedIn) => {
if (loggedIn) {
this.context.router.push({pathname: '/'})
} else {
return this.setState({error: true})
}
})
},
render() {
return (
<section className="is-offset-6 is-4 center width">
<img src="Img/mhp_logo.svg"/>
<span className="insightMHP">MHP</span>
<span className="insight">Insight 2016</span>
<form onSubmit={this.onSubmitLogin}>
<p className="control">
<input className="input inputfield" type="text" placeholder="Email" ref="username"/>
</p>
<p className="control">
<input className="input inputfield" type="password" placeholder="Password" ref="password"/>
</p>
<p className="control ">
{this.state.error && (
<p style={styles.error}>!! Wrong password !!</p>
)}
<button className="button is-success Loginbtn">
Login
</button>
<span className="center">
<Link to="/register">Register</Link>
</span>
</p>
</form>
</section>
)
}
});
export default Login
|
// const object = {
// methodOne: function() {
// console.log('nilai method one')
// },
// methodTwo: function() {
// return this.methodOne()
// }
// }
// const object = {
// methodOne: ()=> {
// console.log('aha')
// },
// methodTwo: ()=> object.methodOne()
// }
// console.log()
// object.methodTwo()
// let nilai = [
// {title: 'ari'},
// {title: 'aji'},
// {title: 'arif'},
// ];
let nilai = [
{title: 'ari'},
{title: 'aji'},
{title: 'arif'},
];
//lebih tepat digunakan untuk pengurutan abjad
// walaupun 7 lebih kecil daripada 1000 yang dari urutan pertama ialah 7, karena
// nilai awalnya adalah 7 lebih besar daripada 1000
// let newNilai = nilai.sort((a, b) => a - b);
// // let newNilai = nilai.sort((item) => item == 50)
// console.log(newNilai);
// nilai.map((item, index) => {
// if(index >= 2) {
// console.log('terganti')
// }else{
// console.log(`item: ${item}, index: ${index}`)
// }
// })
let filter = nilai.filter((item, index) => item.title == 'aji')
console.log(filter)
// let nama = ['alya','adita','arya']
// let newVal = ['adit','pena']
// nama.push(nama[0] == 'dita', ...nama)
// console.log(newNama)
// console.log(nama)
// nama.splice(1, 0, ...newVal)
// console.log(nama) |
import React from "react";
import styles from "./footer.module.scss";
import Icon from "../../utils/icon";
const Footer = () => {
return (
<div className={"container-fluid " + styles.main_wrapper}>
<div className="row">
<div className={styles.footer_wrapper}>
<div className={styles.footer_left}>
<div className={styles.links}>
<h2 className={styles.f_head}>Company</h2>
<ul>
<li>Home</li>
<li>About us</li>
<li>Services</li>
<li>Packages</li>
<li>Contact Us</li>
</ul>
</div>
<div className={styles.links}>
<h2 className={styles.f_head}>Informations</h2>
<ul>
<li>Home</li>
<li>About us</li>
<li>Services</li>
<li>Packages</li>
<li>Contact Us</li>
</ul>
</div>
<div className={styles.links}>
<h2 className={styles.f_head}>Informations</h2>
<ul>
<li>Home</li>
<li>About us</li>
<li>Services</li>
<li>Packages</li>
<li>Contact Us</li>
</ul>
</div>
</div>
<div className={styles.footer_right}>
<h2 className={styles.f_head}>Contact Us</h2>
<span>info@companyname.com</span>
<span>+9884648340</span>
</div>
</div>
</div>
<div className="row">
<div className={styles.terms_wrapper}>
<div className={styles.terms_text}>
<span>Terms & conditions | Privacy Policy</span>
</div>
<div className={styles.terms_icons_wrap}>
<div className={styles.icons}>
<Icon icon="faceb" size={20} />
<Icon icon="twit" size={20} />
<Icon icon="link" size={20} />
<Icon icon="tube" size={20} />
</div>
<div className={styles.rights_res}>2020. All right reserved</div>
</div>
</div>
</div>
</div>
);
};
export default Footer;
|
import React from 'react'
import { makeStyles, Grid, Typography, List, ListItem, ListItemText, Link } from '@material-ui/core'
const useStyles = makeStyles(theme => ({
root: {
backgroundColor: '#2D2D2D',
color: theme.palette.common.white,
},
component: {
padding: theme.spacing(8, 8, 4),
[theme.breakpoints.down('sm')]: {
padding: theme.spacing(4, 3),
}
},
paper: {
padding: theme.spacing(2),
},
copyRights: {
background: '#191919',
textAlign: 'center',
fontSize: '12px',
lineHeight: '16px',
color: '#ffffff7d',
padding: '15px'
},
title: {
fontWeight: 'bold',
fontSize: '14px',
lineHeight: '19px',
marginBottom: '24px'
},
nav: {
maxWidth: '400px'
},
links: {
display: 'inline-block',
verticalAlign: 'top',
color: theme.palette.common.white,
width: '50%',
fontWeight: 'normal',
fontSize: '14px',
lineHeight: '19px',
margin: '0 16px 0 -16px',
whiteSpace: 'nowrap'
},
buttons: {
display: 'flex',
flexDirection: 'column',
maxWidth: '135px',
[theme.breakpoints.down('sm')]: {
maxWidth: '400px',
flexDirection: 'row',
width: 'calc(100vw - 48px)'
}
},
button: {
paddingBottom: theme.spacing(2),
[theme.breakpoints.down('sm')]: {
padding: '0 20px 0 0'
}
},
store: {
width: 135,
[theme.breakpoints.down('sm')]: {
width: 120
}
},
}))
export default function SupportComponent() {
const classes = useStyles()
return (
<div className={classes.root}>
<div className={classes.component}>
<Grid className={classes.missions} container spacing={4} direction="row" justify="center" alignItems="stretch">
<Grid className={classes.mission} item>
<Typography variant="h3" className={classes.title}>Website</Typography>
<List component="nav" className={classes.nav}>
<ListItem className={classes.links} button component="a" href="#id">
What
</ListItem>
{/* <ListItem className={classes.links} button component="a" href="#naming">
Free
</ListItem> */}
<ListItem className={classes.links} button component="a" href="#mission">
Mission
</ListItem>
{/* <ListItem className={classes.links} button component="a" href="#funding">
The Name REAL
</ListItem> */}
{/* <ListItem className={classes.links} button component="a" href="#privacy">
Secure
</ListItem> */}
{/* <ListItem className={classes.links} button component="a" href="#competitors">
Competitors
</ListItem> */}
{/* <ListItem className={classes.links} button component="a" href="#subscription">
Funding
</ListItem> */}
<ListItem className={classes.links} button component="a" href="#support">
Support Us
</ListItem>
<ListItem className={classes.links} button target="_blank" component="a" href="https://real.app/real-privacy-policy-html-english.html">
Privacy Policy
</ListItem>
<ListItem className={classes.links} button target="_blank" component="a" href="https://real.app/real-terms-service-html-english.html">
Terms and Service
</ListItem>
<ListItem className={classes.links} button target="_blank" component="a" href="https://real.app/real-eula-html-english.html">
EULA
</ListItem>
</List>
</Grid>
<Grid className={classes.mission} item>
<Typography variant="h3" className={classes.title}>Get the App</Typography>
<div className={classes.buttons}>
<div className={classes.button}>
<Link href="https://apps.apple.com/us/app/real-social-media/id1485194570?ls=1"><img src={`${process.env.PUBLIC_URL}/assets/appstore.png`} className={classes.store} alt="" /></Link>
</div>
{/*
<div className={classes.button}>
<Link href="/android_coming_soon.html"><img src={`${process.env.PUBLIC_URL}/assets/playstore.png`} className={classes.store} alt="" /></Link>
</div>
*/}
</div>
</Grid>
</Grid>
</div>
<div className={classes.copyRights}>
</div>
</div>
)
}
|
'use strict';
const codependency = require('codependency');
codependency.register(module, {
index: ['optionalPeerDependencies']
});
const connectors = require('./connectors');
const migrate = require('./migrate');
const models = require('./models');
let dbConfigs;
//
exports.registerConnectorType = (typeName, module) => connectors.registerConnectorType(typeName, module);
exports.registerConnector = (dbName, dbConfig) => connectors.registerConnector(dbName, dbConfig);
exports.getConnector = (dbName) => connectors.getConnector(dbName);
exports.registerMigrate = (dbName, version, module, meta) => migrate.registerMigrate(dbName, version, module, meta);
exports.dbCreate = async (dbName) => await migrate.dbCreate(dbName);
exports.dbMigrate = async (dbName, targetVersion) => await migrate.dbMigrate(dbName, targetVersion);
exports.dbDrop = async (dbName) => await migrate.dbDrop(dbName);
exports.create = async () => await migrate.create();
exports.migrate = async (targetVersion) => await migrate.migrate(targetVersion);
exports.drop = async () => await migrate.drop();
exports.registerModel = (name, module) => models.register(name, module);
exports.getModel = (name) => models.get(name);
/**
*
* @param config
*/
exports.setup = async (config) => {
// Cache the config for later user
dbConfigs = config || {};
// Validate config object
const configType = (Array.isArray(dbConfigs)) ? 'array' : typeof dbConfigs;
if (configType !== 'object') {
throw new Error(`Invalid "dbms" configuration type "${configType}", must be an object map`);
}
// Setup each dbms connector
for (const dbName of Object.keys(dbConfigs)) {
connectors.registerConnector(dbName, dbConfigs[dbName]);
}
};
/**
*
*/
exports.start = async () => {
await connectors.start();
};
/**
*
*/
exports.stop = async () => {
await connectors.stop();
};
|
//* 全部的意思
import * as mod1 from './mod1';
console.log(mod1.a,mod1.b,mod1.c);
|
const API_URL = "http://localhost:8000/graphql";
class AuthService {
login(email, password) {
let requestBody = {
query: `
query {
login(email: "${email}", password: "${password}") {
userId
token
tokenExpiration
}
}
`,
};
fetch("http://localhost:8000/graphql", {
method: "POST",
body: JSON.stringify(requestBody),
headers: {
"Content-Type": "application/json",
},
})
.then((res) => {
if (res.status !== 200 && res.status !== 201) {
throw new Error("Failed!");
}
return res.json();
})
.then((resData) => {
if (resData.data.login.token) {
localStorage.setItem("user", JSON.stringify(resData.data.login));
}
})
.catch((err) => {
console.log(err);
});
}
getCurrentUser() {
return JSON.parse(localStorage.getItem("user"));
}
}
export default new AuthService();
|
/** Shuffle a set of numbers without duplicates.
Example:
// Init an array with set 1, 2, and 3.
int[] nums = {1,2,3};
Solution solution = new Solution(nums);
// Shuffle the array [1,2,3] and return its result.
Any permutation of [1,2,3] must equally likely to be returned.
solution.shuffle();
// Resets the array back to its original configuration [1,2,3].
solution.reset();
// Returns the random shuffling of array [1,2,3].
solution.shuffle(); */
class Solution {
constructor(nums){
this.nums = nums;
}
reset(){
return this.nums;
}
shuffle() {
//make copy of nums
const copyOfNums = [...this.nums];
const len = copyOfNums.length;
//iterate through copy of nums
for(let i = 0; i < len; i++){
// create random new position
// must ensure once an item is placed at an index it can't be moved
const randomIdx = Math.floor(Math.random() * (len - i)) + i;
// swap elements at current index with random index
[copyOfNums[i], copyOfNums[randomIdx]] = [copyOfNums[randomIdx], copyOfNums[i]]
// return random number
}
return copyOfNums;
}
}
const sample = new Solution([1, 2, 3, 4, 5, 6]);
console.log('Initial array: ', sample.nums);
console.log('Shuffled array: ', sample.shuffle());
console.log('reset', sample.reset());
|
let soma = require("./somar");
let subtrai = require("./subtrair");
let multplica = require("./multiplicar");
let divide = require("./dividir")
function calculadora(num1,num2,operador){
switch(operador){
case "+":
return soma(num1,num2);
case "-":
return subtrai(num1,num2);
case "*":
return multplica(num1,num2);
case "/":
return divide(num1,num2);
default:
console.log("Digite uma operação válida!!!");
break;
}
}
module.exports = calculadora; |
const { NETLIFY_ENV } = require('../env')
const hosting = [
// this (optional) plugin enables Progressive Web App + Offline functionality
// To learn more, visit: https://gatsby.dev/offline
// 'gatsby-plugin-offline',
{
resolve: 'gatsby-plugin-prefetch-google-fonts',
options: {
fonts: [
{
family: 'Oswald',
subsets: ['latin'],
},
{
family: 'Open Sans',
variants: ['400', '700'],
},
],
},
},
]
if (NETLIFY_ENV) {
hosting.push({
resolve: 'gatsby-plugin-netlify',
options: {
// option to add more headers. 'Link' headers are transformed by the below criteria
headers: {
// "/*": [
// "Basic-Auth: someuser:somepassword anotheruser:anotherpassword",
// ],
},
// option to add headers for all pages. 'Link' headers are transformed by the below criteria
allPageHeaders: [],
// mergeSecurityHeaders: true, // boolean to turn off the default security headers
// mergeLinkHeaders: true, // boolean to turn off the default gatsby js headers
// mergeCachingHeaders: true, // boolean to turn off the default caching headers
// optional transform for manipulating headers under each path (e.g.sorting), etc.
// transformHeaders: (headers, path) => headers,
// boolean to turn off automatic creation of redirect rules for client only paths
// generateMatchPathRewrites: true,
},
})
}
module.exports = hosting
|
import React, { Component } from 'react';
import {
Container,Col, Row, Button, Form, FormGroup, Label, Input, FormText, Card
} from 'reactstrap';
import { Link } from 'react-router-dom';
import './input-form.css';
class InputForm extends Component {
render() {
return (
<Container className="App">
<Form>
<Row>
<Col xs="12" sm="12" md="12" lg="4">
<FormGroup row>
<Label className="label-color" for="LeasingCompany" xs={6} sm={6} md={6}>Leasing Company Name</Label>
<Col sm={6} md={6} xs={6}>
<div style={{ display: 'flex'}}>
<div>
<Input type="email" name="email" id="LeasingCompany" placeholder="Select Leasing Company" />
</div>
<div>
<Link to={'/userInfo'} className="nav-link">
<span className="glyphicon glyphicon-plus-sign label-color"></span>
</Link>
</div>
</div>
</Col>
</FormGroup>
<FormGroup row>
<Label className="label-color" for="LeasingCompany" xs={6} sm={6} md={6}>File Name</Label>
<Col xs={6} sm={6} md={6}>
<Input type="email" name="email" id="LeasingCompany" placeholder="Select Leasing Company" />
</Col>
</FormGroup >
<FormGroup row>
<Label className="label-color" for="LeasingCompany" xs={6} sm={6} md={6}>Pool ID</Label>
<Col xs={6} sm={6} md={6}>
<Input type="email" name="email" id="LeasingCompany" placeholder="Select Leasing Company" />
</Col>
</FormGroup>
</Col>
<Col xs="12" sm="12" md="12" lg="4">
<FormGroup row>
<Label className="label-color" for="checkbox2" xs={6} sm={6} md={6}>Checkbox</Label>
<Col sm={6} md={6} xs={6}>
<FormGroup check>
<div style={{ display: 'flex'}}>
<div>
<Input type="checkbox" id="checkbox2" />{' '}
</div>
<div>
<Label style= {{ paddingLeft: '22px' }}className="label-color" check>
Real Estate
</Label>
</div>
</div>
</FormGroup>
<FormGroup check>
<div style={{ display: 'flex'}}>
<div>
<Input type="checkbox" id="checkbox2" />{' '}
</div>
<div>
<Label style= {{ paddingLeft: '22px' }}className="label-color" check>
Monthly Files
</Label>
</div>
</div>
</FormGroup>
</Col>
</FormGroup >
<FormGroup row>
<Label className="label-color" for="cutofdate" xs={6} sm={6} md={6}>Deal Date</Label>
<Col xs={6} sm={6} md={6}>
<Input type="text" name="email" id="cutofdate" placeholder="with a placeholder" />
</Col>
</FormGroup >
<FormGroup row>
<Label className="label-color" for="cutofdate" xs={6} sm={6} md={6}>Data Sheet</Label>
<Col xs={6} sm={6} md={6}>
<Input type="text" name="email" id="cutofdate" placeholder="with a placeholder" />
</Col>
</FormGroup>
</Col>
<Col xs="12" sm="12" md="12" lg="4">
<FormGroup row>
<Label className="label-color" for="cutofdate" xs={6} sm={6} md={6}>Cut of Date</Label>
<Col xs={6} sm={6} md={6}>
<Input type="text" name="email" id="cutofdate" placeholder="with a placeholder" />
</Col>
</FormGroup>
<FormGroup row>
<Label className="label-color" for="cutofdate" xs={6} sm={6} md={6}>Remarks</Label>
<Col xs={6} sm={6} md={6}>
<Input type="text" name="email" id="cutofdate" placeholder="with a placeholder" />
</Col>
</FormGroup>
<FormGroup row>
<Label className="label-color" for="exampleText" xs={6} sm={6} md={6}>Remarks</Label>
<Col xs={6} sm={6} md={6}>
<Input type="textarea" name="text" id="exampleText" />
</Col>
</FormGroup>
</Col>
</Row>
</Form>
<Row>
<Col xs={12} sm={12} md={12} lg={4}>
<FormGroup >
<Col>
<Button style={{ width: '100%' }}>Destination Planning</Button>
</Col>
<Col>
<Card style={{ height: '200px'}}>
</Card>
</Col>
</FormGroup>
</Col>
<Col xs={12} sm={12} md={12} lg={4}>
<FormGroup>
<Col >
<Button style={{ width: '100%' }}>Source Field</Button>
</Col>
<Col>
<Card style={{ height: '200px'}}>
</Card>
</Col>
</FormGroup>
</Col>
<Col xs={12} sm={12} md={12} lg={4}>
<FormGroup>
<Col xs={12} sm={12} md={12} lg={12}>
<Button style={{ width: '100%' }}>Computed</Button>
</Col>
<Col xs={12} sm={12} md={12} lg={12}>
<Card style={{ height: '200px'}}>
</Card>
</Col>
</FormGroup>
</Col>
</Row>
</Container>
);
}
}
export default InputForm;
|
import { nanoid } from 'nanoid';
import { hash as create, compare } from 'bcrypt';
import { api as apiConfig, web as webConfig } from 'modules/config';
const {
passwords: { saltRounds },
tokens: { length: tokenLength }
} = apiConfig;
export const generateToken = () => {
return nanoid(tokenLength);
};
export const hashPassword = async (password) => {
return await create(password, saltRounds);
};
export const compareHashAndPassword = async (hash, password) => {
return await compare(password, hash);
};
export const buildWebUrl = (path) => {
const { useTls, hostname, port } = webConfig;
const needsPort = (!useTls && port !== 80) || (useTls && port !== 443);
const needsSlash = !path.startsWith('/');
return `http${useTls ? 's' : ''}://${hostname}${needsPort ? `:${port}` : ''}${
needsSlash ? '/' : ''
}${path}`;
};
|
var http = require('http'),
url = require('url'),
matches = require('./matches'),
zlib = require('zlib'),
config = require('../config.json'),
xml2js = require('xml2js');
function read(feedurl, cb) {
var urldata = url.parse(feedurl);
var options = {
host: urldata.hostname,
port: urldata.port,
path: urldata.path,
headers: { "Accept-Encoding": "identity" },
method: 'GET'
};
var parser = new xml2js.Parser();
var req = http.request(options, function(res) {
var buffer = '';
var res2 = zlib.createGunzip();
res.pipe(res2);
res2.on('data', function(d) {
var text = d.toString();
buffer += text;
});
res2.on('err', function(err) {
cb(err);
});
res2.on('end', function(d) {
if (d) {
var text = d.toString();
buffer += text;
}
parser.parseString(buffer, function (err, data) { cb(err, data) });
});
});
req.end();
}
function tryapply(score, cb) {
try {
apply(score, cb);
}
catch (ex) {
console.log(ex);
}
}
function apply(score, cb) {
var visited = 0;
var processed = 0;
if (!score || !score.livescore || !score.livescore.league)
return;
score.livescore.league.forEach(function (league) {
if (!league || !league.match)
return;
league.match.forEach(function (mtch) {
var local = mtch.home[0].$.name;
if (local)
local = normalizeName(local);
var localgoals = getInteger(mtch.home[0].$.goals);
var away = mtch.away[0].$.name;
if (away)
away = normalizeName(away);
var awaygoals = getInteger(mtch.away[0].$.goals);
var date = getDate(mtch.$.date);
var finished = mtch.$.status == 'FT';
if (localgoals == null || awaygoals == null)
return;
visited++;
setImmediate(function () {
matches.findOne({ local: local, away: away, date: date }, function (err, data) {
if (err) {
cb(err, null);
return;
}
if (!data) {
processed++;
if (processed == visited)
cb(null, processed);
return;
}
data.localgoals = localgoals;
data.awaygoals = awaygoals;
if (finished)
data.finished = true;
var id = data.id;
if (data._id) {
id = data._id.toString();
delete data._id;
}
matches.update(id, data, function (err, result) {
if (err) {
cb(err, null);
return;
}
processed++;
if (processed == visited)
cb(null, processed);
});
});
});
});
});
}
function normalizeName(name) {
if (config.translate && config.translate[name])
name = config.translate[name];
name = name.replace(/\s/g,'');
return name;
}
function getInteger(text) {
if (text == null)
return null;
var value = parseInt(text);
if (value.toString() != text.trim())
return null;
return value;
}
function getDate(text) {
return text.substring(6, 10) + text.substring(3, 5) + text.substring(0, 2);
}
module.exports = {
read: read,
apply: tryapply
};
|
import { useLoaderData, Form, redirect } from "react-router-dom";
import { deleteNote, getNote } from "../notes";
export default function Note() {
const note = useLoaderData();
return (
<div>
<h2>{note.title}</h2>
<div>{note.content}</div>
<Form method="post" style={{ marginTop: "2rem" }}>
<button type="submit">Delete</button>
</Form>
</div>
);
}
export async function loader({ params }) {
const note = await getNote(params.noteId);
if (!note) throw new Response("", { status: 404 });
return note;
}
export async function action({ params }) {
await deleteNote(params.noteId);
return redirect("/new");
}
|
/**
* Created by xiaojiu on 2017/4/14.
*/
define(['../app'], function (app) {
app.directive('autofocus', ['$timeout', function ($timeout) {
return {
restrict: 'A',
link: function ($scope, $element) {
$timeout(function () {
$element[0].focus();
});
}
}
}]);
}); |
module.exports = ({ node }) => `<p>${node.getContent()}</p>`;
|
import NavigationService from '../../services/navigation.service.js';
export default {
name: 'Home',
// components: { PageAvatar },
data() {
return {
apps: [],
};
},
mounted() {
this.apps = NavigationService.Apps;
},
};
|
'use strict';
var util = require('util');
var path = require('path');
var yeoman = require('yeoman-generator');
var yosay = require('yosay');
var JadePreviewGenerator = yeoman.generators.Base.extend({
initializing: function () {
this.pkg = require('../package.json');
},
prompting: function () {
var done = this.async();
if (!this.options['skip-welcome-message']) {
this.log(yosay(
'Welcome to the Jade Preview Generator!'
));
}
var prompts = [{
type: 'value',
name: 'projectName',
message: 'What would you name this project?',
default: 'My Project'
},{
type: 'confirm',
name: 'libsass',
message: 'Do you want libsass installed? choose this if you don\'t have SASS already installed, this tends to be a bit buggy compared to Ruby SASS but saves an install',
default: false
}, {
type: 'confirm',
name: 'coffee',
message: 'Are you the sort of hipster that likes a bit of coffee script?',
default: false
}, {
type: 'confirm',
name: 'ftpDeploy',
message: 'Do you want the bits so you can deploy this via ftp?',
default: false
}, {
type: 'confirm',
name: 's3Deploy',
message: 'Do you want the bits so you can deploy this via s3?',
default: false
}];
this.prompt(prompts, function (props) {
this.projectName = props.projectName;
this.coffee = props.coffee;
this.libsass = props.libsass;
this.ftpDeploy = props.ftpDeploy;
this.s3Deploy = props.s3Deploy;
done();
}.bind(this));
},
writing: {
app: function () {
this.dest.mkdir('app');
this.template('_layout.jade', 'app/_layout.jade');
this.template('index.jade', 'app/index.jade');
this.dest.mkdir('app/images');
this.write('app/images/.gitkeep', '');
this.dest.mkdir('app/scripts');
if (this.coffee) {
this.src.copy('main.coffee', 'app/scripts/main.coffee');
} else {
this.src.copy('main.js', 'app/scripts/main.js');
}
this.dest.mkdir('app/styles');
this.src.copy('main.scss', 'app/styles/main.scss');
this.dest.mkdir('app/styles/fonts');
this.write('app/styles/fonts/.gitkeep', '');
},
projectfiles: function () {
this.template('_package.json', 'package.json');
this.src.copy('_bower.json', 'bower.json');
if (this.ftpDeploy) {
this.write('.ftp.json', JSON.stringify({
preview: {
username: 'username',
password: 'password'
},
dist: {
username: 'username',
password: 'password'
}
}, null, 2));
}
if (this.s3Deploy) {
this.write('.aws.json', JSON.stringify({
AWSAccessKeyId: "Your Access Key",
AWSSecretKey: "Your Secret Key"
}, null, 2));
}
this.template('README.md', 'README.md');
this.template('Gruntfile.js', 'Gruntfile.js');
this.src.copy('editorconfig', '.editorconfig');
this.src.copy('jshintrc', '.jshintrc');
this.src.copy('bowerrc', '.bowerrc');
this.src.copy('gitignore', '.gitignore');
this.src.copy('gitattributes', '.gitattributes');
}
},
end: function () {
if (!this.options['skip-install']) {
this.installDependencies({
skipMessage: this.options['skip-install-message'],
skipInstall: this.options['skip-install']
});
}
}
});
module.exports = JadePreviewGenerator;
|
import React, { useEffect } from 'react';
import styled from 'styled-components';
import { connect } from 'react-redux';
import { setCurrentNamespace, setCurrentNamespaceData } from '../actions/namespaceActions';
import { setCurrentRoomName, setRoomInfo } from '../actions/roomActions';
import UserBox from '../components/molecules/UserBox/UserBox';
const StyledWrapper = styled.div`
width: 100%;
height: 100vh;
position: relative;
display: flex;
justify-content: center;
align-items: center;
flex-direction: column;
color: ${({ isDarkTheme }) => (isDarkTheme ? '#fff' : '#2d2d2d')};
`;
const ContentWrapper = styled.section`
width: 80%;
display: flex;
justify-content: center;
flex-direction: column;
`;
const StyledUserBoxWrapper = styled.div`
width: 200px;
position: absolute;
bottom: 0;
right: 0;
`;
const StyledHeading = styled.h1`
color: inherit;
font-size: 42px;
`;
const StyledParagraph = styled.p`
font-size: 18px;
letter-spacing: 1px;
margin-top: 2rem;
`;
const HomePage = ({ setCurrentNamespace, setCurrentNamespaceData, setCurrentRoomName, setRoomInfo, isDarkTheme }) => {
useEffect(() => {
setCurrentNamespace('home');
setCurrentNamespaceData(null);
setCurrentRoomName(null);
setRoomInfo({});
}, []);
return (
<StyledWrapper isDarkTheme={isDarkTheme}>
<ContentWrapper>
<StyledHeading>How to test this chat?</StyledHeading>
<StyledParagraph>
If you don't want to create new server, just click the plus button on the left side, and search for{' '}
<strong>Test</strong> server. The password for this room is <strong>test</strong> You can create your own
server as well.
</StyledParagraph>
</ContentWrapper>
<StyledUserBoxWrapper>
<UserBox />
</StyledUserBoxWrapper>
</StyledWrapper>
);
};
const mapStateToProps = ({ toggleReducer: { isDarkTheme } }) => {
return { isDarkTheme };
};
const mapDispatchToProps = dispatch => {
return {
setCurrentNamespace: namespaceID => dispatch(setCurrentNamespace(namespaceID)),
setCurrentNamespaceData: namespaces => dispatch(setCurrentNamespaceData(namespaces)),
setCurrentRoomName: roomName => dispatch(setCurrentRoomName(roomName)),
setRoomInfo: roomInfo => dispatch(setRoomInfo(roomInfo))
};
};
export default connect(mapStateToProps, mapDispatchToProps)(HomePage);
|
// Creates a products array
let _products = [];
/*
Fetches json data from the file persons.json
*/
fetch('json/products.json')
.then(function (response) {
return response.json();
})
.then(function (json) {
console.log(json);
// Json array gets inserted into empty products array
products = json;
// TODO: call append functionality
appendProducts(json);
});
/*
Appends json data to the DOM
*/
function appendProducts(products) {
let htmlTemplate = "";
for (let product of products) {
htmlTemplate += `
<article class="product">
<img src="${product.img}"></img>
<h2>${product.model}</h2>
<p>Brand: ${product.brand}</p>
<p>Price: ${product.price},-</p>
<button onclick="editProduct()">Edit</button>
<button class="deleteButton" id="" onclick="deleteProduct()">Delete</button>
</article>
`
}
// TODO: loop through products and append to them DOM
document.querySelector('#productWrapper').innerHTML = htmlTemplate;
}
function search(searchValue) {
console.log(searchValue);
// TODO: implement search functionality
let filteredProducts = [];
for (let product of _products) {
let model = product.model.toLowerCase();
let brand = product.brand.toLowerCase();
if (model.includes(searchValue) || brand.includes(searchValue)) {
filteredProducts.push(product);
}
}
console.log(filteredProducts);
appendProducts(filteredProducts);
}
function checkStock() {
let checkBox = document.getElementById("inStock");
if (checkBox.checked == true) {
let filteredProducts = [];
for (let product of products) {
if (product.status === "inStock") {
filteredProducts.push(product);
}
}
appendProducts(filteredProducts);
} else {
appendProducts(products);
}
}
// todo delete and edit
function deleteProduct() {
let button = this.document.querySelector('.deleteButton');
let product = button.closest('.product');
// Only removes the first product no matter what button you press
/* product.style.display = 'none'; */
// Removes every product in order per press
product.parentNode.removeChild(product);
// what do i do.....
} |
import * as React from 'react';
import { List, ListItem } from 'material-ui/List';
class ActionShowRecentImagery extends React.Component {
constructor(props) {
super(props);
this.state = { visibility: false };
}
addImagery() {
if (this.props.map.getLayer('Imagery')) {
var newProp = (this.props.map.getLayoutProperty("Imagery", 'visibility') === 'visible') ? 'none' : 'visible';
this.props.map.setLayoutProperty("Imagery", 'visibility', newProp); //toggle the imagery
this.setState({ visibility: newProp });
}
else {
this.props.map.addLayer({
'id': 'Imagery',
'type': 'raster',
'source': {
'type': 'raster',
'tiles': [
'https://a.tiles.mapbox.com/v4/digitalglobe.nal0g75k/{z}/{x}/{y}.png?access_token=pk.eyJ1IjoiZGlnaXRhbGdsb2JlIiwiYSI6ImIzMWY3NDA3NjlhYThlNjdiMTA2MGMxNzU0ZDE2YzY4In0.8jtWjgDsAwqFouTWzSnkJw',
],
'tileSize': 256
},
'maxzoom': 19,
'layout': {
'visibility': 'visible'
},
'paint': {}
}, this.props.map.style.stylesheet.layers[1].id); //used to be Landuse -National park
this.setState({ visibility: 'visible' });
}
}
render() {
return (
<List>
<ListItem primaryText={(this.state.visibility==='visible' ? "Hide " : "Show ") + "recent imagery"} onClick={this.addImagery.bind(this)}/>
</List>
);
}
}
export default ActionShowRecentImagery;
|
angular.module('ngApp.mileStone').controller('TradelaneTrackingMileStoneController', function ($scope, TradelaneMilestoneService, $translate, $uibModal, toaster, ModalService) {
var setMultilingualOptions = function () {
$translate(['FrayteError', 'FrayteInformation', 'FrayteValidation', 'FrayteSuccess', 'Frayte_Success', 'FrayteWarning',
'PleaseCorrectValidationErrors', 'FrayteWarning_Validation', 'DeleteTradelaneMilestone', 'SureDeleteMilestone',
'MileStoneDeletedSuccessfully', 'ErrorDeletingRecords', 'ErrorGettingRecords', 'NoRecordSelectedShipmentHandler', 'NoRecordShipmentHandlerMethods']).then(function (translations) {
$scope.Frayte_Warning = translations.FrayteWarning;
$scope.Frayte_Success = translations.Frayte_Success;
$scope.ShipmentDeletedFromSession = translations.ShipmentDeletedFromSession;
$scope.TitleFrayteError = translations.FrayteError;
$scope.TitleFrayteInformation = translations.FrayteInformation;
$scope.TitleFrayteValidation = translations.FrayteValidation;
$scope.TitleFrayteSuccess = translations.FrayteSuccess;
$scope.TextValidation = translations.PleaseCorrectValidationErrors;
$scope.DeleteTradelaneMilestone = translations.DeleteTradelaneMilestone;
$scope.SureDeleteMilestone = translations.SureDeleteMilestone;
$scope.MileStoneDeletedSuccessfully = translations.MileStoneDeletedSuccessfully;
$scope.ErrorDeletingRecords = translations.ErrorDeletingRecords;
$scope.ErrorGettingRecords = translations.ErrorGettingRecords;
$scope.NoRecordSelectedShipmentHandler = translations.NoRecordSelectedShipmentHandler;
$scope.NoRecordShipmentHandlerMethods = translations.NoRecordShipmentHandlerMethods;
});
};
$scope.DeleteTradelaneMileStone = function (MileStoneId) {
var modalOptions = {
headerText: $scope.DeleteTradelaneMilestone,
bodyText: $scope.SureDeleteMilestone
};
ModalService.Confirm({}, modalOptions).then(function () {
TradelaneMilestoneService.DeleteMileStone(MileStoneId).then(function (response) {
if (response.data) {
toaster.pop({
type: 'success',
title: $scope.Frayte_Success,
body: $scope.MileStoneDeletedSuccessfully,
showCloseButton: true
});
$scope.val = true;
$scope.getTrackingMileStones();
}
else {
toaster.pop({
type: 'error',
title: $scope.TitleFrayteError,
body: $scope.ErrorDeletingRecords,
showCloseButton: true
});
}
}, function () {
toaster.pop({
type: 'error',
title: $scope.TitleFrayteError,
body: $scope.ErrorDeletingRecords,
showCloseButton: true
});
});
});
};
$scope.MileStoneAddEdit = function (row) {
//var modalInstance;
if (row === undefined || row === null) {
var modalInstance = $uibModal.open({
animation: true,
templateUrl: 'tradelaneMileStone/tradelaneMileStoneAddEdit.tpl.html',
controller: 'TradelaneMileStoneAddEditController',
windowClass: '',
size: 'lg',
backdrop: 'static',
resolve: {
TrackingMileStone: function () {
return "";
},
Mode: function () {
return "Add";
},
TrackingMileStoneLastRecord : function(){
return $scope.TrackingMileStones[$scope.TrackingMileStones.length - 1];
},
ShipmentHandlerMethod: function () {
return $scope.ShipmentHandlerMethod;
}
}
});
modalInstance.result.then(function () {
$scope.getTrackingMileStones();
}, function () {
});
}
else {
var modalInstance1 = $uibModal.open({
animation: true,
templateUrl: 'tradelaneMileStone/tradelaneMileStoneAddEdit.tpl.html',
controller: 'TradelaneMileStoneAddEditController',
windowClass: '',
size: 'lg',
backdrop: 'static',
resolve: {
TrackingMileStone: function () {
return row;
},
Mode: function () {
return "Edit";
},
TrackingMileStoneLastRecord: function () {
return "";
},
ShipmentHandlerMethod: function () {
return $scope.ShipmentHandlerMethod;
}
}
});
modalInstance1.result.then(function () {
$scope.getTrackingMileStones();
}, function () {
});
}
};
$scope.getTrackingMileStones = function () {
TradelaneMilestoneService.GetTrackingMileStone($scope.ShipmentHandlerMethod.ShipmentHandlerMethodId).then(function (response) {
if (response.data.length > 0) {
$scope.TrackingMileStones = response.data;
}
else {
$scope.TrackingMileStones = response.data;
if (!$scope.val) {
toaster.pop({
type: 'warning',
title: $scope.TitleFrayteValidation,
body: $scope.NoRecordSelectedShipmentHandler,
showCloseButton: true
});
}
}
}, function () {
toaster.pop({
type: 'error',
title: $scope.TitleFrayteError,
body: $scope.ErrorGettingRecords,
showCloseButton: true
});
});
};
function init() {
$scope.val = false;
TradelaneMilestoneService.GetShipmentHandlerMethods().then(function (response) {
if (response.data.length > 0) {
$scope.ShipmentHandlerList = response.data;
$scope.ShipmentHandlerMethod = $scope.ShipmentHandlerList[0];
$scope.getTrackingMileStones();
}
else {
$scope.ShipmentHandlerList = response.data;
toaster.pop({
type: 'warning',
title: $scope.TitleFrayteValidation,
body: $scope.NoRecordhipmentHandlerMethods,
showCloseButton: true
});
}
}, function () {
toaster.pop({
type: 'error',
title: $scope.TitleFrayteError,
body: $scope.ErrorGettingRecords,
showCloseButton: true
});
});
setMultilingualOptions();
}
init();
}); |
import React from 'react';
import {
Title,
TextBlock,
InvasivePotential,
Resources,
Resource,
Summary,
SexualReproduction,
AsexualReproduction,
EcologicalNiche,
PopulationDensity,
EnvironmentImpact,
ManagementMethod,
ManagementApplication,
OriginalArea,
SecondaryArea,
Introduction,
Breeding,
CaseImage,
} from '../components';
import image from '../../../assets/caseDetails/myval-severni.jpg';
const Myval = (props) => (
<div>
<Title
name="Mýval severní"
nameSynonyms="Medvídek mýval"
latinName="Procyon lotor"
latinNameSynonyms=""
/>
<Summary>
<OriginalArea text="Severní Amerika, severní část Jižní Ameriky" />
<SecondaryArea text="Evropa, střední Asie" />
<Introduction text="Únik z chovů, záměrné vypouštění" />
<Breeding text="Není povolen" />
</Summary>
<CaseImage source={image} copyright="Foto: J. Vogeltanz" />
<TextBlock>
<p>
Mýval je zavalité zvíře s nahrbeným držením těla, které je
dlouhé až 70 cm, délkou ocasu až 30 cm a hmotností 16 kg.
Typická je jeho černobílá maska na hlavě a pruhovaný ocas (4-7
proužků). Tyto znaky jsou důležité pro rozpoznání od
zaměnitelných druhů – psíka mývalovitého a jezevce lesního.
Typické pro mývala jsou dlouhé pohyblivé prsty, zvláště na
předních končetinách. Mýval severní je uveden v Evropském
seznamu nepůvodních invazních druhů a jeho záměrné šíření je
protizákonné. Je uveden i na Seznamu prioritních invazních druhů
ČR (tzv. černý seznam). Myslivecká legislativa tento druh řadí
mezi zavlečené druhy živočichů v přírodě nežádoucí, které však
může lovit pouze myslivecká stráž.
</p>
<h5>Ekologie a způsob šíření</h5>
<p>
Mýval dává přednost listnatým a smíšeným lesům s bohatým
podrostem v okolí vod. Může se však vyskytovat i na jiných
vlhkých stanovištích nebo v mozaikovité krajině či v blízkosti
lidských sídel (např. příměstské parky či vilové zástavby). Při
hledání potravy využívá mýval obratné přední končetiny, jimiž
pečlivě ohmatává všechny předměty. Je všežravý, avšak rychlejší
nebo větší živočichy nedokáže ulovit. Jeho potrava je velmi
rozmanitá – od drobných savců ptáků a jejich vajec, mlžů, raků,
drobných rybek, hmyzu až po různé plody či zemědělské plodiny
Svou potravní strategií může ohrožovat populace různých druhů
živočichů. Mýval je aktivní hlavně v noci, výborně šplhá po
stromech, přes den se ukrývá zejména ve stromových dutinách,
nebo i skalních štěrbinách. V zimě omezuje svou aktivitu, ale
neukládá se k zimnímu spánku. Převážně žije samotářsky, někdy se
však sdružuje i do větších skupin. Jeho teritorium se pohybuje v
rozmezí stovek hektarů. V podmínkách ČR se mýval zatím vyskytuje
především v polohách pod 600 m n. m., nadmořská výška však není
limitujícím faktorem výskytu. Početnost populace mývala u nás
prudce stoupá, zejména v severozápadních Čechách a na střední
Moravě, odkud se druh velmi rychle šíří.
</p>
</TextBlock>
<InvasivePotential>
<SexualReproduction score={3} />
<AsexualReproduction score={0} />
<EcologicalNiche score={3} />
<PopulationDensity score={1} />
<EnvironmentImpact score={3} />
<ManagementMethod text="odchyt" />
<ManagementApplication text="řídká, lokálně" />
</InvasivePotential>
<Resources>
<Resource>
Anděra M., Červený J.: Červený seznam savců České republiky.
Příroda,22: 139-149.
</Resource>
<Resource>
Anděra M., Červený J. 2009: Velcí savci v České republice.
Rozšíření, historie a ochrana. 2. Šelmy (<i>Carnivora</i>).
Národní muzeum, Praha,215 pp.
</Resource>
<Resource>
Anděra M., Gaisler J., 2019: Savci České republiky: rozšíření,
ekologie ochrana. 2. upravené vydání. Academia Praha, 286 str.
</Resource>
<Resource>
Červený J., Anděra M., Koubek P., Homolka M., Toman A., 2001:
Recently expanding mammal species in the Czech Republic:
distribution, abundace and legal status. Beiträge zur Jagd- und
Wildforschung, 26: 111-125.
</Resource>
<Resource>
Červený J., Anděra M., Koubek P. Bufka L., 2006: Změny
vrozšíření naich savců na začátku 21. století. Ochrana přírody
62(2): 44-51.
</Resource>
<Resource>
Matějů J., Dvořák S., Tejrovský V., Bušek O., Ježek M., Matějů
Z., 2012: Current distribution of Procyon lotor in nort-western
Bohemia, Czech Republic (<i>Carnivora: Procyonidae</i>). Lynx,
n.s. (Praha), 43: 133-140.
</Resource>
<Resource>
Mlíkovský J., Stýblo P. (eds.), 2006: Nepůvodní druhy fauny a
flóry ČR. ČSOP Praha, 496 pp.
</Resource>
</Resources>
</div>
);
export default Myval;
|
import React from 'react'
import styled from "styled-components";
const Card = styled.div`
padding-left:15px;
margin-top:-10px;
font-size:0.8rem;
width:42%;
color:red;
`
const Error = ({code}) => {
let errorMessage = ""
switch (code){
case 1:
errorMessage = "Selecione um token"
break;
case 2:
errorMessage = "Saldo insuficiente"
break;
default:
errorMessage =""
}
return (
<Card>
<p>{errorMessage}</p>
</Card>
)
}
export default Error
|
import fetch from 'isomorphic-fetch';
import Promise from 'bluebird';
Promise.promisifyAll(fetch);
export const LOAD_LOCALE = 'LOAD_LOCALE';
export const loadLocale = ( locale ) => {
return {
type: LOAD_LOCALE,
locale
};
};
export const isLocaleLoaded = ( globalState ) => {
return globalState.locale && globalState.locale.loaded;
};
|
tippy('#books-statistics', {
theme: 'light-border',
arrow: false,
allowHTML: true,
placement: 'right',
touch: false,
maxWidth: 550,
interactive: true,
interactiveBorder: 1,
content: '<div class="article-component"><h1>Statistics</h1><ul><li>Ellenberg, How Not to Be Wrong (2014)</li><li>James et al., An Introduction to Statistical Learning (2017)</li><li>McGrayne, The Theory That Would Not Die (2011)</li><li>Silver, The Signal and the Noise (2012)</li><li>Taleb, The Black Swan (2007)</li></ul></div>'
}); |
//https://www.hackerrank.com/challenges/quicksort3
//Lomuto partition scheme
function processData(input) {
'use strict';
const len = input.split('\n');
const arr = len.pop().split(' ').map(Number);
let partition = function(arr, lo, hi){//splits array in half based on high and low ends of array.
let p = arr[hi]; //top of (sub)array
let i = lo; //bottom of (sub)array.
for(let j = lo; j<hi; j++){ //loop upward from low index to separate items into lower half subarray.
if (arr[j] <= p){ //check for items lower than current pivot.
//stick located 'lower than p' at beginning of lower half subarray.
let aj = arr[j]; //save item at j to variable for splicing.
arr.splice(j,1,arr[i]); //delete item at j and insert item from i.
arr.splice(i,1,aj); //delete item at i and insert saved item from j.
i++; //increment i to establish new top of subarray after splicing.
}
}
//swap top of lower subarray with pivot to effectively complete the halving.
arr.splice(hi,1,arr[i]);
arr.splice(i,1,p);
console.log(arr.join(' ')); //print the array after partition swaps to satisfy challenge.
return i; //return i so we have a pivot point for recursive sort.
}
let quickSort = function(arr, lo, hi){
if(lo < hi){ //only so long as something still isn't sorted.
let p = partition(arr, lo, hi); //grab latest low index.
quickSort(arr, lo, p - 1); //recursively call again with decremented high end.
quickSort(arr, p + 1, hi); //recursively call again with incremented low end.
}
return arr; //return the array for recursive calls.
}
quickSort(arr, 0, len-1); //call the function.
} |
import {SEARCH_TASK} from '../actions/search';
export default function search(state = "", action) {
switch (action.type) {
case SEARCH_TASK:
return action.payload;
default:
return state;
}
} |
"use strict";
Object.defineProperty(exports, "__esModule", { value: true });
const bringToFront = require('bindings')('bringToFront');
function pid(pid) {
return bringToFront.pidToFront(pid);
}
exports.pid = pid;
|
import styled from "styled-components";
const Overlay = styled.div`
width: 200 !important;
height:10% !important;
background-color: rgba(255, 255, 255, 1);
overflow-x: hidden;
transition: 0.5s;
a {
padding: 8px;
text-decoration: none;
font-size: 36px;
color: #d31027;
display: block;
transition: 0.3s;
&:hover {
color: #000;
}
&:focus {
color: #000;
}
}
.closebtn {
position: relative;
text-align: center;
margin-top: 50px;
font-size: 30px;
}
h1 {
font-size: 150px;
color: #d31027;
}
}
h2 {
color: #d31027;
}
p {
color: #d31027;
}
`;
const ContentHolder = styled.div`
text-align: center;
`;
const Wrapper = styled.div`
text-align: center;
`;
const Span = styled.span`
width:50%
display: block;
text-align: center;
margin-top: 150px;
margin-right: auto;
margin-left: auto;
font-size: 13px;
cursor: pointer;
`;
export { Overlay, Wrapper, Span, ContentHolder };
|
var express = require('express');
var nunjucks = require('nunjucks');
var db = require('./db.js')
var path = require('path')
var app = express();
app.set('view engine', 'html');
app.engine('html', nunjucks.render);
app.use('/vendor', express.static(path.join(__dirname, 'node_modules')));
//static routing. express let me say, for every request that comes in with /vendor, use module path to allow me to concatinate things together. current directory name I'm in (__dirname). this is why i require path up there.
nunjucks.configure('views', {noCache: true});//nodemon reloads when change in js
app.use(require('body-parser').urlencoded( { extended: false } )) //same thing as requiring body-parser up top and using it down here
app.use(require('method-override')('_method'))//it'll only work on a post. it'll see _method, and say instead of post, i'm going to delete something. and it'll go down the delete route.
app.use(function(req, res, next){
console.log(req.url); //middleware!
next();
}) //this just reminds me of the concept of middleware
//these are restful routes
app.get('/', function(req, res, next){
// res.send('hello') // what done callback is next similar to? pipeline...
// res.render('index.html');
res.render('index.html', {
cat_name: 'home',
count: db.getCategoryNames().length,
categories: db.getCategoryNames()
}) //templating engine takes two things: page to render & data we want to pass down
})
app.post('/', function(req, res, next){
var new_cat_name = req.body.new_cat_name
db.createCategory(new_cat_name)
res.redirect('/')
}) //how would I have put this in routes instead of here?
app.use('/categories', require ('./routes/categories')); // with the verb(?) /categories here, now changing the commented out routed to start with /, as /categories will be caught here before going to router
app.use(function(err, req, res, next){
res.render('error.html', {error: err}) //so the err here is the first parameter of the function. and somehow it comes from db ... "when there is an error in our code, it'll end up hitting this route"
})
/* has some notes
app.get('/categories', function(req, res, next){
res.render('products.html', {
products: db.getCategoryNames()
})
}) //i think this will soon become not useful
app.get('/categories/:cat_name/products', function(req, res, next){
var cat_name = req.params.cat_name //a little confusing so far
res.render('products.html', {
count: db.getCategoryNames().length,
categories: db.getCategoryNames(),
products: db.getProductsByCategory(cat_name)
})
})
*/
var port = process.env.PORT || 3000; //this is for when heroku gives me an address
app.listen(port, function(){
console.log(`Hello, I'm listening on port ${port}`)
}) // why doesn't my terminal say 3000? but it works at 3000..
|
import feathers from 'feathers-client'
import io from 'socket.io-client'
const prodConfig = {
appURL: 'https://io-app-backend.now.sh'
}
const devConfig = {
appURL: 'http://localhost:3030'
}
const getConfig = () => window.location.hostname.startsWith('localhost')
? devConfig
: prodConfig
const socket = io(getConfig().appURL)
const app = feathers()
.configure(feathers.hooks())
.configure(feathers.socketio(socket))
.configure(feathers.authentication({ storage: window.localStorage }))
export default app
|
//CARICAMENTO ELEMENTI E AGGIORNAMENTO COSTO TOTALE
var costoTotale = 0;
let divCostoTotale = document.getElementById("prezzoTotale");
divCostoTotale.textContent="€ " + costoTotale;
function onJson(json){
console.log(json);
if(json.length === 0){
//se il carrello è vuoto:
let divMessaggio = document.getElementById("carrelloVuoto");
divMessaggio.classList.remove("hide");
}
else if(json!==-1){
let divMessaggio = document.getElementById("carrelloVuoto");
divMessaggio.classList.add("hide");
}
let contenuti = json;
//AGGIUNTA DI N DIV CHE CONTERRANNO I PRODOTTI:
for(let i=0; i<contenuti.length; i++){
let contenitore=document.createElement("div");
let titolo=document.createElement("h1");
let img=document.createElement("img");
let Prezzo=document.createElement("strong");
let button=document.createElement("button");
let quantita=document.createElement("h3");
let minicontainer = document.createElement("div");
contenitore.classList.add("box");
button.classList.add("RimuoviDalCarrello");
titolo.textContent=contenuti[i].titolo;
img.src=contenuti[i].link_immagine;
Prezzo.textContent="€" + contenuti[i].prezzo;
button.textContent="Rimuovi dal carrello";
quantita.textContent="Quantità: " + contenuti[i].quantita;
button.dataset.id=contenuti[i].id_prodotto;
button.addEventListener("click", RimuoviDalCarrello);
minicontainer.appendChild(titolo);
minicontainer.appendChild(Prezzo);
minicontainer.appendChild(quantita);
contenitore.appendChild(img);
contenitore.appendChild(minicontainer);
contenitore.appendChild(button);
list.appendChild(contenitore);
//calcolo il costo totale e lo appendo nel div scelto:
let totProdotto = contenuti[i].prezzo;
costoTotale = costoTotale + totProdotto;
let divCostoTotale = document.getElementById("prezzoTotale");
divCostoTotale.textContent="€ " + costoTotale;
}
divCostoTotale.textContent="€" + Number.parseFloat(costoTotale).toFixed(2);
}
function onResponse(response){
return response.json();
}
//richiesta dati:
fetch("caricaCarrello").then(onResponse).then(onJson);
//FUNZIONE PER CONFERMARE L'ORDINE PRESENTE NEL CARRELLO:
function confermaOrdine(event){
let controllaCarrelloVuoto = document.getElementById("carrelloVuoto");
if(controllaCarrelloVuoto.classList !== "hide"){
//se il carrello non è vuoto:
let costoTotale = document.getElementById("prezzoTotale").textContent.substring(1);
console.log(costoTotale)
function onJsonConfermaOrdine(json){
console.log(json);
if(json !== -1){
//tutto ok
window.location.href="ordini";
}
else{
//se ci sono stati errori:
console.log("errore nella conferma dell'ordine!");
}
}
fetch("confermaOrdine/"+costoTotale).then(onResponse).then(onJsonConfermaOrdine);
}
}
let bottoneConferma = document.getElementById("confermaOrdine");
bottoneConferma.addEventListener("click", confermaOrdine);
//FUNZIONE PER RIMUOVERE UN PRODOTTO DAL CARRELLO:
function onJsonRemove(json){
console.log(json)
if(json===1){
let boxCarrello = document.getElementById("list");
boxCarrello.innerHTML="";
fetch("caricaCarrello").then(onResponse).then(onJson);
}
else console.log("errore nell'aggiornamento dei prodotti!");
}
function RimuoviDalCarrello(event){
console.log("Cliccato rimuovi");
//IMPLEMENTARE LA FUNZIONE IN PHP E JS
let idProdotto = event.currentTarget.dataset.id;
console.log(idProdotto)
fetch("rimuoviDalCarrello/"+idProdotto).then(onResponse).then(onJsonRemove);
}
|
import React, {useState, useEffect} from 'react'
import axios from 'axios'
import Posts from '../Components/posts'
import ProfileCard from '../Components/ProfileCard'
import PostSection from '../Components/PostSection'
import getCookie from '../Components/getCookie'
function Feed(){
const [posts, setPosts] = useState()
let postElements
useEffect(()=>{
axios({
method: 'get',
url: 'http://127.0.0.1:8000/api/post/following',
headers: {
'X-CSRFToken': getCookie('csrftoken'),
'Content-Type': 'application/json',
},
withCredentials: true,
}).then( response =>{
setPosts(response.data.data)
}).catch(e=>{
console.log(e)
})
},[])
if (posts){
postElements = posts.map((element)=>{
return <Posts post={element}/>
})
}
return(
<div className='container'>
<div className='row'>
<div className='col-4 col-lg-3 pt-5'>
<ProfileCard />
</div>
<div className='col-8 col-lg-6 pt-5'>
<div className='mb-3'>
<PostSection />
{postElements}
</div>
</div>
<div className='col-0 col-lg-3'>
</div>
</div>
</div>
)
}
export default Feed |
import styled from 'styled-components';
export const Login = {
wrap: styled.div`
flex: 1;
display: flex;
flex-direction: column;
align-items: center;
justify-content: center;
background-color: #000000;
color: #ffffff;
`,
input: styled.input`
width: 80%;
max-width: 300px;
height: 50px;
margin-bottom: 10px;
text-align: center;
`,
image: styled.img`
max-width: 200px;
margin-bottom: 20px;
`,
button: styled.button`
width: 80%;
max-width: 300px;
height: 50px;
margin-top: 20px;
margin-bottom: 10px;
text-align: center;
`,
error: styled.div`
color: red;
`
};
|
export const mainActionTypes = {
GET_DATA: 'GET_DATA',
DELETE_ITEM: 'DELETE_ITEM',
CLEAR_REDUCER: 'CLEAR_REDUCER'
} |
const myPromise = new Promise((resolve, reject) => {
if (false) {
setTimeout(() => {
resolve("I have succeed");
}, 1000);
} else {
reject("I have failed");
}
});
myPromise
.then((value) => value + '!!!!')
.then(newValue => console.log(newValue))
.catch((errorValue) => console.log(errorValue + " in rejection"));
|
import { expect } from 'chai';
import { shortHash, validateHash } from './hashUtils';
describe('shortHash()', () => {
it('shorten the hash when too long', () => {
const h =
'387b5d41024cb8b99d6d4baec3d2651e0999e73e51ee88df01496d08917a3b65';
const expected = '387b5d41..65';
expect(shortHash(h)).to.equal(expected);
});
it('shorten the hash when exactly 13 chars long', () => {
const h = '387b5d41024cb';
const expected = '387b5d41..cb';
expect(shortHash(h)).to.equal(expected);
});
it('does not shorten the hash when 12 chars or less', () => {
const h12 = '387b5d41024c';
expect(shortHash(h12)).to.equal(h12);
const h5 = '387b5';
expect(shortHash(h5)).to.equal(h5);
});
});
describe('validateHash()', () => {
it('validates', () => {
expect(
validateHash(
'12c571bce42a3400a315ed4f86c008a5ae055b90386c0a892103f1d4cd022acc'
)
).to.be.true;
});
it('does not validate', () => {
expect(validateHash('abc123')).to.be.false;
});
});
|
/* See license.txt for terms of usage */
define([
"firebug/firebug",
"firebug/lib/trace",
"firebug/lib/events",
"firebug/lib/string",
"firebug/lib/url",
"firebug/debugger/debuggerLib",
"firebug/debugger/script/sourceLink",
"firebug/net/netUtils",
],
function(Firebug, FBTrace, Events, Str, Url, DebuggerLib, SourceLink, NetUtils) {
"use strict";
// ********************************************************************************************* //
// Constants
var Cc = Components.classes;
var Ci = Components.interfaces;
var TraceError = FBTrace.toError();
var Trace = FBTrace.to("DBG_SOURCEFILE");
// ********************************************************************************************* //
// Source File
/**
* SourceFile instance is created for every compilation unit (i.e. a source created
* at the back end). The instance is created by {@link SourceTool} every time a "newSource"
* or the initial "sources" packet is received.
*/
function SourceFile(context, actor, href, isBlackBoxed, isPrettyPrinted)
{
this.context = context;
this.actor = actor;
// SourceFile should not use URL fragment (issue 7251)
//this.href = Url.normalizeURL(href);
this.href = href;
// xxxHonza: this field should be utilized by issue 4885.
this.isBlackBoxed = isBlackBoxed;
this.isPrettyPrinted = isPrettyPrinted;
// The content type is set when 'source' packet is received (see onSourceLoaded).
this.contentType = null;
// xxxHonza: refactor the flag logic.
this.compilation_unit_type = "script_tag";
this.callbacks = [];
}
SourceFile.prototype =
/** @lends SourceFile */
{
getURL: function()
{
return this.href;
},
toString: function()
{
return this.href;
},
getSourceLength: function()
{
// xxxHonza: TODO
return 0;
},
getLine: function(lineNo, callback)
{
if (this.loaded)
{
if (lineNo >=0 && lineNo < this.lines.length)
{
var source = this.lines[lineNo];
if (callback)
callback(source);
return source;
}
Trace.sysout("sourceFile.getLine; Line number is out of scope!");
return;
}
this.loadScriptLines(function(lines)
{
var line;
if (lineNo >=0 && lineNo < lines.length)
line = lines[lineNo];
if (callback)
callback(line);
});
},
isExecutableLine: function(lineNo)
{
// xxxHonza: TODO
return false;
},
// xxxHonza: This method should return a promise
loadScriptLines: function(callback)
{
if (this.loaded)
{
callback(this.lines);
return this.lines;
}
// Remember the callback. There can be more callbacks if the script is
// being loaded and more clients want it.
this.callbacks.push(callback);
// Ignore if the request-for-source is currently in progress.
if (this.inProgress)
{
Trace.sysout("sourceFile.loadScriptLines; in-progress " + this.href);
return;
}
Trace.sysout("sourceFile.loadScriptLines; Load source for: " + this.href);
this.inProgress = true;
// Firebug needs to be attached to the thread client to get sources.
var threadClient = this.context.activeThread;
if (!threadClient)
{
Trace.sysout("sourceFile.loadScriptLines; ERROR no thread client " + this.href);
callback(null);
return;
}
// This is the only place where source (the text) is loaded for specific URL.
var sourceClient = threadClient.source(this);
sourceClient.source(this.onSourceLoaded.bind(this));
},
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Private Helpers
onSourceLoaded: function(response)
{
Trace.sysout("sourceFile.onSourceLoaded; response:", response);
if (response.error)
{
TraceError.sysout("sourceFile.onSourceLoaded; ERROR " +
response.error, response);
return;
}
// Convert all line delimiters to the unix style. The source editor
// (in the Script panel) also uses unix style and so we can compare
// if specific text is already set in the editor.
// See {@link ScriptView.showSource}
var source = response.source.replace(/\r\n/gm, "\n");
this.loaded = true;
this.inProgress = false;
this.lines = Str.splitLines(source);
this.contentType = response.contentType;
// Notify all callbacks.
for (var i=0; i<this.callbacks.length; i++)
this.callbacks[i](this.lines);
// Fire global notification.
Events.dispatch(Firebug.modules, "onSourceLoaded", [this, this.lines]);
},
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Pretty Print
/**
* xxxHonza: yet need to be revisited
*/
togglePrettyPrint: function(cb)
{
function callback(response)
{
this.onSourceLoaded(response);
cb();
}
callback = callback.bind(this);
var sourceClient = this.context.activeThread.source(this);
if (this.isPrettyPrinted)
sourceClient.disablePrettyPrint(callback);
else
sourceClient.prettyPrint(4, callback);
this.isPrettyPrinted = !this.isPrettyPrinted;
},
getCategory: function()
{
var mimeType = NetUtils.getMimeType(this.contentType, this.href);
return NetUtils.getCategory(mimeType);
}
}
// ********************************************************************************************* //
// Static Methods
SourceFile.getSourceFileByUrl = function(context, url)
{
return context.getSourceFile(url);
};
SourceFile.findScriptForFunctionInContext = function(context, fn)
{
var dbgGlobal = DebuggerLib.getThreadDebuggeeGlobalForContext(context);
if (!dbgGlobal)
{
Trace.sysout("sourceFile.findScriptForFunctionInContext; no debugger");
return null;
}
var dbgFn = dbgGlobal.makeDebuggeeValue(fn).unwrap();
if (!dbgFn || !dbgFn.script)
{
// This happens e.g. for native functions.
Trace.sysout("sourceFile.findScriptForFunctionInContext; no script", {
fn: fn,
dbgFn: dbgFn,
});
return null;
}
return dbgFn.script;
};
SourceFile.findSourceForFunction = function(fn, context)
{
var script = SourceFile.findScriptForFunctionInContext(context, fn);
return script ? SourceFile.getSourceLinkForScript(script, context) : null;
};
SourceFile.getSourceLinkForScript = function(script, context)
{
var sourceLink = new SourceLink(script.url, script.startLine, "js");
return sourceLink;
};
// ********************************************************************************************* //
// xxxHonza: backward compatibility, search the code and fix.
Firebug.SourceFile = SourceFile;
return SourceFile;
// ********************************************************************************************* //
});
|
import botkit from 'botkit';
require('dotenv').config(); // I struggled to get my environmental variables working correctly, so I went with the dotenv method of importing instead.
// I learned about the Yelp API from the following link: https://github.com/olalonde/node-yelp .
const Yelp = require('yelp');
const yelp = new Yelp({
consumer_key: process.env.YELP_CONSUMER_KEY,
consumer_secret: process.env.YELP_CONSUMER_SECRET,
token: process.env.YELP_TOKEN,
token_secret: process.env.YELP_TOKEN_SECRET,
});
// example bot
// botkit controller
const controller = botkit.slackbot({
debug: false,
});
//
// initialize slackbot
const slackbot = controller.spawn({
token: process.env.SLACK_BOT_TOKEN,
// this grabs the slack token we exported earlier
}).startRTM(err => {
// start the real time message client
if (err) { throw new Error(err); }
});
const smallTalkPart2 = (response, convo) => {
const resp = convo.extractResponse('smallTalkResp1');
if (resp === 'good') {
convo.say('Yay!! I am so glad to hear.');
} else {
convo.say('Oh no!! I am sorry to hear.');
}
};
const smallTalkPart1 = (response, convo) => {
const howAreYouResp = { key: 'smallTalkResp1', multiple: false };
convo.ask('I am doing well, thank you for asking! How are you doing?', () => {
smallTalkPart2(response, convo);
convo.next();
}, howAreYouResp);
};
// example hello response
controller.hears(['hello', 'hi', 'howdy'], ['direct_message', 'direct_mention', 'mention'], (bot, message) => {
bot.api.users.info({ user: message.user }, (err, res) => {
if (res) {
bot.reply(message, `Hello, ${res.user.name}!`);
} else {
bot.reply(message, 'Hello there!');
}
});
});
controller.hears(['sup', 'how are you', 'whats up'], ['direct_message', 'direct_mention', 'mention'], (bot, message) => {
bot.startConversation(message, smallTalkPart1);
});
controller.hears(['what are you even talking about'], ['direct_message', 'direct_mention', 'mention'], (bot, message) => {
bot.reply(message,
{
// text: 'Lots of good options out there, but this seems to be the best bet',
attachments: [
{
title: 'Oh no!! Looks like we are having a bit of a misscommunication...',
image_url: 'http://img.ifcdn.com/images/b4b49a08ad0d7129ff1f107b2355d5a0ea23f65b66add4cfc6ad3a39df335724_1.jpg',
},
],
});
});
controller.hears(['help'], ['direct_message', 'direct_mention', 'mention'], (bot, message) => {
bot.reply(message, 'Here are a few things we can talk about: Your next meal (just some derivation of food/hungry), how your day is going.');
});
controller.hears(['food', 'hungry', 'eat'], ['direct_message', 'direct_mention', 'mention'], (bot, message) => {
bot.startConversation(message, (resp, convo) => {
const foodTypeResp = { key: 'foodTypeYelp', multiple: false };
convo.ask('Yea, I am hungry too!! What type of food tickles your fancy today?', (response) => {
// askLocation(response, convo);
// (response, convo) => {
const yelpLocationResponse = { key: 'yelpLocationResponse', multiple: false };
// let foodType = convo.extractResponse('foodTypeYelp');
// convo.say(foodType);
convo.say(convo.extractResponse('foodTypeYelp'));
convo.next();
convo.ask('In what town and state are you looking to eat?',
// yelpSearch(response, convo);
() => {
const foodSearchFINAL = convo.extractResponse('foodTypeYelp');
const citySearchFINAL = convo.extractResponse('yelpLocationResponse');
yelp.search({ term: foodSearchFINAL, location: citySearchFINAL, limit: 1 })
.then((data) => {
// I learned about the below formatting for attachment messages from: https://github.com/howdyai/botkit#botreply
bot.reply(message,
{
text: 'Lots of good options out there, but this seems to be the best bet',
attachments: [
{
title: `${data.businesses[0].name}`,
title_link: `${data.businesses[0].url}`,
text: `${data.businesses[0].snippet_text}`,
image_url: `${data.businesses[0].image_url}`,
},
],
});
// convo.say(data.businesses[0].name); // console.log(data);
})
.catch((err) => {
convo.say('Hmm... could not really find anything...');
});
convo.next();
// convo.next();
}, yelpLocationResponse);
convo.next();
}, foodTypeResp);
convo.next();
});
}); // I learned about conversations from the example file "/node_modules/botkit/convo_bot.js".
// prepare webhook
// for now we won't use this but feel free to look up slack webhooks
controller.setupWebserver(process.env.PORT || 3001, (err, webserver) => {
controller.createWebhookEndpoints(webserver, slackbot, () => {
if (err) { throw new Error(err); }
});
});
controller.on('outgoing_webhook', (bot, message) => {
bot.replyPublic(message,
{
// text: 'Lots of good options out there, but this seems to be the best bet',
attachments: [
{
title: 'I AM UP!!!',
image_url: 'http://imagesmtv-a.akamaihd.net/uri/mgid:file:http:shared:mtv.com/news/wp-content/uploads/2016/07/Gerald-1467390458.gif',
},
],
});
});
|
function getURL(fileID){
wx.cloud.downloadFile({
fileID: fileID,
success: res => {
// get temp file path
console.log(res.tempFilePath)
return res.tempFilePath
},
fail: err => {
// handle error
console.log('getURL失败', err)
}
})
}
module.exports.getURL = getURL
|
module.exports = function(req, res, next){
if(!req.session.user){
req.session.user = {
auth0_id: '',
profile_name: '',
picture: '',
email: '',
room_name: ''
}
}
next();
} |
import React from 'react'
import PropTypes from 'prop-types'
function Search(props) {
return (
<div>
</div>
)
}
Search.propTypes = {
}
export default Search
|
import React from "react";
import { getStoryName } from "storybook/storyTree";
import UncontrolledFooterApp from "./examples/UncontrolledFooter";
const storyName = getStoryName("ListBoxWithTags");
export default {
title: storyName,
};
export const ListBoxWithTagsUncontrolledFooter = () => <UncontrolledFooterApp />;
|
var num=parseInt(process.argv[2]);
function hanoi(num){
move("1","3",num);
}
var step=0;
function move(start,end,move_num){
if(move_num==1){
console.log("第"+(++step)+"步 ",start,"---->",end);
}else{
var other="123".replace(start,"").replace(end,"");
move(start,other,move_num-1);
move(start,end,1);
move(other,end,move_num-1);
}
}
hanoi(num);
module.exports=hanoi; |
import img from "../../../assets/attachment.svg";
import menuSvg from "../../../assets/menu.svg";
import { getElement, $, Events } from "../router/utils";
import { getChatData, MessageManager, updateDb } from "./chat-logic.js";
import { noAuth } from "../ext";
import { IDB } from "../idb";
const typingBox = {
element: "div",
attrs: {
class: "inpbox_"
},
children: [
{
element: "input",
idx: "chat_type",
attrs: {
class: "textBox",
spellcheck: "false",
autocomplete: "none"
},
events: {
// keydown: inputOnkeyDown,
// keyup: inputOnKeyUp
}
},
{
element: "img",
idx: "attachbtn",
events: {
click() {
// var a=document.createElement("input");
const f = $.create("input", { type: "file" });
f.oninput = () => Events.emit("attach-img", f.files[0]);
f.click();
},
contextmenu(e) {
e.preventDefault();
}
},
attrs: {
src: img,
class: "attach-img"
}
},
{
idx: "sendbtn",
element: "button",
textContent: "Send",
attrs: { class: "send-btn" },
onrender() {
this.remove();
}
}
]
};
const headerComponent = {
idx: "header",
element: "div",
attrs: {
class: "header-div"
},
children: [
{
element: "div",
attrs: { style: "display:grid" },
children: [
{ element: "div", idx: "peername", attrs: { class: "peername" } },
{ element: "div", idx: "peerstatus", attrs: { class: "peerstatus" } }
]
},
{
element: "div",
attrs: { class: "menuimg" },
children: [
{
element: "img",
attrs: { src: menuSvg },
events: {
click() {},
contextmenu(e) {
return e.preventDefault();
}
}
}
]
}
]
};
const contentComponent = {
element: "div",
idx: "contentmain",
attrs: {
class: "ChatContent"
}
};
const footerComponent = {
element: "div",
idx: "inputbox",
attrs: {
class: "footer"
},
children: [typingBox]
};
export default {
route: "/chat/",
element: "div",
attrs: {},
async beforeRender(args) {
const stopExec = await noAuth(this.currentRoute, this.getRouter().navData);
if (stopExec) {
return { stopExec };
}
const chatID = (args || [])[0];
if (!chatID) {
this.getRouter().pushStatus(500, "No Chat ID Provided");
return { stopExec: true };
}
},
onUnmount() {
console.log("unmounting");
Events.emit("unmount-router");
return (
(document.body.style.overflow = "auto"),
(document.body.style.background = document.documentElement.style.background =
"#e3e3e3")
);
},
async onrender(args) {
const mainContent = getElement(this, "contentmain");
let _fromDB;
let manager;
document.body.style.overflow = "hidden";
document.body.style.background = document.documentElement.style.background =
"#fff";
const chatID = args[0];
const spinner = $.create("mat-spinner", {
style: "position:absolute;top:0;bottom:0;right:0;left:0;margin-top:30%"
});
this.getRouter().root.appendChild(spinner);
const dbGet = (await IDB.get(chatID)) || {};
const meta = dbGet.meta;
if (meta) {
spinner.remove();
_fromDB = true;
manager = new MessageManager(meta, mainContent);
}
const data = await getChatData(chatID);
if (data.$$serviceWorker$$) {
return;
}
if (manager) {
const prev = manager._is_online;
manager._is_online = data.is_online;
if (
(prev === "offline" || !manager._canUseRTC) &&
data.is_online === "online"
) {
manager._startConn();
}
manager.updateUI();
}
const _data = data;
_data["is_online"] = undefined;
spinner.remove();
updateDb(chatID, _data, false);
if (meta) {
if (meta.peer !== data.peer || meta.chat_id !== data.chat_id) {
console.error("error!");
return this.getRouter().pushStatus(
500,
"An Error occured while loading the chat data..please reload the page and try again"
);
}
}
if (data.error) {
return this.getRouter().pushStatus(500, data.error);
} else {
if (_fromDB) {
return;
}
return new MessageManager(data, mainContent);
}
},
children: [headerComponent, contentComponent, footerComponent]
};
|
(function (window) {
'use strict';
/**
* Defines global d3Scomos object for export
*/
//var d3scomos = d3.scomos = {version: "0.0.1"}; //library version
var d3scomos = {version: "0.0.1"}; //library version
/** private method to init library instance with dependencies
* @param {Object} config object with options defined
*/
function __initInternals(thisLib,config)
{
var $$ = thisLib;
/** add d3 to current scope **/
$$.d3 = window.d3 ? window.d3 : typeof require !== 'undefined' ? require("d3") : undefined;
$$.options = config.options || {};
$$.modelData = config.modelData ||{};
}
/**
* initializes the d3scomos library with passed config object
* @param accepts config json has format {options,modelData}
*/
d3scomos.init = function(config)
{
//init base dependencies
/** default config options add new as required **/
var __options = {height:1000,width:1000,
autoSizeOnDrag:true,
onStartScaleToFit:true
}
var __config = {options: config.options || __options , modelData :config.modelData || {} }
__initInternals(this,__config);
}
/** d3scomos modeldata handling apis
* Creates various lists and provides setters and getters to access model data
* @constructor
* @param modelData {object} valid scomos model json
**/
function ModelDataApi (__modelData) {
/** private holds data for current graph **/
var __speciesList,
__compartmentList,
__reactionList,
__productList,
__reactantList;
var __graphHeight, __graphWidth;
if(__modelData)
__initLists();
/**
* process the __modelData to initialize various lists
*
* @param
* @returns
*
*/
function __initLists()
{
__speciesList = {},
__compartmentList = {},
__reactionList = {},
__productList = {},
__reactantList = {};
//before initializing lists validate data
//TODO : should log any discrepancies found in the data while validating
/** validate compartment : init compartments parent propety **/
modelValidator.setComptParents(__modelData.mapCompartmentLayouts);
/** set parents of reaction nodes **/
//TODO refactor these ad hoc model changes to another function
modelValidator.setReactionParents(__modelData.mapReactionLayouts, __modelData.mapCompartmentLayouts);
//create __speciesList
var speciesData = __modelData.mapSpeciesLayouts;
__speciesList = arrayUtil.objectToArray(speciesData);
var compartmentsData = __modelData.mapCompartmentLayouts;
__compartmentList = arrayUtil.objectToArray(compartmentsData);
var reactionsList = __modelData.mapReactionLayouts;
__reactionList = arrayUtil.objectToArray(reactionsList);
//set height and width from default compartment
updateHeightWidth();
}
/** gets height and width form default compartment **/
function updateHeightWidth()
{
var defaultCompartment = __modelData.mapCompartmentLayouts["default"];
//if there is no default compartment
//take extreme boundary points and use them
/**
* TODO : until we figure out better way this is dirty hack
*
*/
if(!defaultCompartment){
//add defualt compartment
var defCompart = {};
var boundaryPoints = this.getBoundaryPoints();
defCompart["position"]["iPostionX"] = boundaryPoints.xNeg;
defCompart["position"]["iPostionY"] = boundaryPoints.yNeg;
defCompart.iWidth = boundaryPoints.xPos - boundaryPoints.xNeg;
defCompart.iWidth = boundaryPoints.yPos - boundaryPoints.yNeg;
//add this to default list
__modelData.mapCompartmentLayouts["default"] = defCompart;
//reinit defCompart
defaultCompartment = __modelData.mapCompartmentLayouts["default"];
}
else{
__graphHeight = defaultCompartment.iHeight;
__graphWidth = defaultCompartment.iWidth;
}
}
/** exports this **/
var dataApi ={};
/**
* updates current modelData with the passed data
* and updates dependent lists
*/
dataApi.setData = function(modelData)
{
__modelData = modelData;
//update lists with new Data
__initLists();
}
/**
* get modeldata
* @returns {object} a model data
*/
dataApi.getModelData =function()
{
return __modelData;
}
dataApi.getSpeciesList = function() {
return __speciesList;
};
dataApi.getCompartmentList = function(){
return __compartmentList;
};
dataApi.getReactionList = function(){
return __reactionList;
};
dataApi.getHeight = function()
{
return __graphHeight;
}
dataApi.getWidth = function()
{
return __graphWidth;
}
//TODO add tests for these functions
dataApi.getBoundaryPoints = function()
{
var _xPos = 0,_xNeg = 0,_yPos = 0,_yNeg = 0;
for(var s in __speciesList)
{
var curr = __speciesList[s];
if(curr.position.iX>0)
_xPos = curr.position.iX > _xPos ? curr.position.iX:_xPos;
else
{
_xNeg = curr.position.iX < _xNeg ? curr.position.iX:_xNeg;
}
if(curr.position.iY>0)
_yPos = curr.position.iY > _yPos ? curr.position.iY:_yPos;
else
{
_yNeg = curr.position.iY < _yNeg ? curr.position.iY:_yNeg;
}
}
//do this for compartments
for(var cId in __compartmentList)
{
var curr = __compartmentList[cId];
if(curr.position.iX>0)
_xPos = curr.position.iX > _xPos ? curr.position.iX:_xPos;
else
{
_xNeg = curr.position.iX < _xNeg ? curr.position.iX:_xNeg;
}
if(curr.position.iY>0)
_yPos = curr.position.iY > _yPos ? curr.position.iY:_yPos;
else
{
_yNeg = curr.position.iY < _yNeg ? curr.position.iY:_yNeg;
}
}
/*var extremeXs ={xPos:,xNeg:};
var extremeYs ={yPos:,yNeg:};*/
return {xPos:_xPos,xNeg:_xNeg,yPos:_yPos,yNeg:_yNeg};
}
dataApi.getModelStats = function()
{
return {species : __speciesList.length,
reactions : __reactionList.length,
edges : d3.selectAll('.link')[0].length,/* because we are not tracking edge count*/
compartments : __compartmentList.length
};
}
dataApi.updateAllParents = function updateAllParents(updateSpecies){
updateSpecies = updateSpecies || false;
//before initializing lists validate data
//TODO : should log any discrepancies found in the data while validating
/** validate compartment : init compartments parent propety **/
modelValidator.setComptParents(__modelData.mapCompartmentLayouts);
/** set parents of reaction nodes **/
//TODO refactor these ad hoc model changes to another function
modelValidator.setReactionParents(__modelData.mapReactionLayouts, __modelData.mapCompartmentLayouts);
//update species
//__modelData.mapSpeciesLayouts.forEach(function)/
if(updateSpecies){
for(var sId in __modelData.mapSpeciesLayouts){
modelValidator.updateSpeciesParents(__modelData.mapCompartmentLayouts,__modelData.mapSpeciesLayouts,__modelData.mapSpeciesLayouts[sId]);
}
}
}
/**
* store scomos selection object in model json to maintain states on redraw
* @param {scomosSelection} selection
*/
dataApi.storeScomosSelection = function(selection){
var scomosData = __modelData['scomosData'] = __modelData['scomosData'] || {};
scomosData['selection'] = selection;
}
dataApi.getScomosSelection = function(){
var scomosData = __modelData['scomosData']
if(scomosData)
return scomosData['selection'];
return null;
}
dataApi.storeZoom = function(zoomString){
var scomosData = __modelData['scomosData'] = __modelData['scomosData'] || {};
scomosData['zoomString'] = zoomString;
}
dataApi.getZoom = function(){
var scomosData = __modelData['scomosData']
if(scomosData)
return scomosData['zoomString'];
return null;
}
dataApi.setOnetime = function(oneTime){
var scomosData = __modelData['scomosData'] = __modelData['scomosData'] || {};
scomosData['oneTime'] = oneTime;
}
dataApi.getOnetime = function(){
var scomosData = __modelData['scomosData']
if(scomosData)
if (scomosData['oneTime'] === undefined)
{
scomosData['oneTime'] = true;
}
return scomosData['oneTime']
return null;
}
/** export dataModelAPIs **/
return dataApi;
};
/**
* eskin clip board module.
* handles the copying of SBML nodes .
* Assumptions :
* 1) only sbml nodes will be stored.
* 2) Only sbml Noes of Species and reaction type will be supported.
*/
/**
* clipboard module for d3scomos library. ( this is completely privtate module wont be shared outside library.)
* @param {[type]} function( [description]
* @return {clipboard} instantiates the eskin clipboard module.
*/
var clipboard = (function(){
/**
* eskin clipboard data.
* @type {{specis:[Species],reactions:[Reaction]}}
*/
var _data = {species:[],reactions:[]};
var isCopiable = false;
function triggerClipboardEvent(){
if(_data.species.length > 0 || _data.reactions.length > 0){
isCopiable = true;
}
eskinDispatch.clipbaordEvent({hasData : isCopiable});
}
function getDeepCopyOfClipBoard(){
var _species = _data.species.map(objectHelper.deepCopyNodeObject);
var _reactions = _data.reactions.map(objectHelper.deepCopyNodeObject)
return {species:_species,reactions:_reactions};
}
return {
clear : function(){
_data = {species:[],reactions:[]};
triggerClipboardEvent();
},
/**
* stores the provided selection in clipboard.
* @param {{species:[Species],Reactions:[Reaction]}} toBeCopied selection that is to be stored in clipboard.
* @return {} [description]
*/
copy : function(toBeCopied){
//TODO: add vaidations to check if seleciton is in correct format.
_data = toBeCopied;
triggerClipboardEvent();
},
/**
* returns copiable collection by applying proper transform
* @param {[type]} startAt [description]
* @return {[type]} [description]
*/
paste : function(){
triggerClipboardEvent();
return getDeepCopyOfClipBoard();
},
triggerClipboardEvent : function(){
triggerClipboardEvent();
},
hasPastables : function(){
if(_data.species.length > 0 || _data.reactions.length > 0){
return true;
}
}
}
})();
/**
* Scomos Error module : contains custom error
*/
/**
* validation error : thrown when invalid data is passed to library
*/
//expose these custome errors so that can be used while unit testing
var customErrors = d3scomos.customErrors = {};
customErrors.ValidationError = function ValidationError(message){
this.name = "ValidationError";
this.message = (message || "");
}
customErrors.ValidationError.prototype = Error.prototype;
/**
* d3scomos core : contains business logic functionality
*/
//TODO : add internal json conversion and handling layer
/**
* A keyStore module generates various keys required for construction
**/
var eSkinkeyStore = d3scomos.keyStore = function(){
var speciesIndex = 0;
var compartmentIndex = 0;
var reactionIndex = 0;
var keys = [];//TODO: change this to object i.e. hashtable
var ksConsts = keyStoreConstants;
/**
* wheather key exists in keys array
* @param {String} sKey key to be searched
* @return {boolean} key found status true if key found
*/
function keyExists(sKey){
return keys.indexOf(sKey) != -1;
}
function incrementIndex(sKey){
//split sKey on _
//first group is prefix second group is index
//first group must be string and second group must be a positive integer
var tokens = sKey.split(ksConsts.keySeperator);
if(tokens.length ==2){
var prefix = tokens[0].trim();
var index = tokens[1].trim();
//are these valid
if(objectHelper.isAlphabetsOnly(prefix) && objectHelper.isInteger(index)){
var index = parseInt(index);
if(prefix === ksConsts.speciesPrefix){
if(speciesIndex <index) speciesIndex = index;
}
else if(prefix === ksConsts.compartmentPrefix){
if(compartmentIndex <index) compartmentIndex = index;
}
else if(prefix === ksConsts.reactionPrefix){
if(reactionIndex <index) reactionIndex = index;
}
}
}
}
/**
* key to be added
* @param {String} sKey a key to be added to the keyStore
*/
function __addKey(sKey){
if(sKey && objectHelper.isString(sKey)){
if(!keyExists(sKey)){
//increment index appropriately
incrementIndex(sKey);
return keys.push(sKey);
}
else
throw new customErrors.ValidationError("Unique Index violation : " + sKey+ " allready exists");
}
else
throw new customErrors.ValidationError("Invalid Key : " + sKey+ " . Must be valid string");
}
function _removeKey(sKey){
if(keyExists(sKey)){
return keys.splice(keys.indexOf(sKey),1)[0];
}
__logger.warn('KeyStore : removeKey failed. Key - ',sKey + ' is not in KeyStore.')
}
return {
/**
* clears the keyStore
*/
clear : function(){
speciesIndex = 0;
keys = [];
},
/**
* returns next species sId
* @return {String} next valid eskin sId
*/
getNextSpecies : function(){
speciesIndex += 1;
return ksConsts.speciesPrefix + ksConsts.keySeperator+speciesIndex;
},
/**
* returns next compartment sId
* @return {String} Next valid eskin compartment sId
*/
getNextCompartment : function(){
compartmentIndex += 1;
return ksConsts.compartmentPrefix + ksConsts.keySeperator+compartmentIndex;
},
/**
* returns next reaction sId
* @return {String} next valid eskin reaction sId
*/
getNextReaction : function(){
reactionIndex += 1;
return ksConsts.reactionPrefix + ksConsts.keySeperator+reactionIndex;
},
/**
* adds molecules key to keystore
* @param {String} mkey key to be inserted
* @throws {ValidationError} validation error if this key already exists
* @return return this key
*/
addSpecies:function (sKey){
//TODO: logic to increment species index
__addKey(sKey);
},
/**
* adds compartment key to keystore
* @param {String} mkey key to be inserted
* @throws {ValidationError} validation error if this key already exists
* @return return this key
*/
addCompartment:function (sKey){
//TODO: logic to increment species index
__addKey(sKey);
},
/**
* adds reaction key to keystore
* @param {String} mkey key to be inserted
* @throws {ValidationError} validation error if this key already exists
* @return return this key
*/
addReaction:function (sKey){
//TODO: logic to increment species index
__addKey(sKey);
},
/**
* TODO: Important use this method and this method only to add keys. Specialized add methods will be removed later
* addsKey to keystore Note : avoid using this method use only if keys are category less and unIndexed
* @param {String} key key to be added to keyStore
* @throws {customErrors.ValidationErro} unique violation
* @return return this key
*
*/
addKey : function(sKey){
__addKey(sKey);
},
/**
* check if passed in needle allredy exists in keyStore
* @param {String} needle key to be searched
* @return {boolean} key found status
*/
hasKey : function(needle){
return keyExists(needle);
},
/**
* returns the current values of counters/indexes ( Method added mostly to ease Testing)
* @return {{species:Number,compartment:Number,reaction:Number,count:Number}} current counter status
*/
getCurrentCounters : function(){
return {species:speciesIndex,compartment:compartmentIndex,
reaction:reactionIndex,count:keys.length};
},
/**
* remove the key from keyStore
* @param {string} sKey Key to be removed
* @return {string | null} returns this key if found else null
*/
removeKey : function(sKey){
return _removeKey(sKey);
}
}
};
/**
* contains various string messages used throughout the library
* this will help in localizing the library and also reduce the in broswer memory footprint
*/
/**
* eskin messages object provides static messages
*TODO: look into possibility of customizing these messages as required with passed params
*/
var eskinMessages = {
/** add all error messages here **/
error : {
/** validation error messages **/
validation_sId_empty : "Invalid sId : sId is not optional",
validation_sId_does_not_exist : "Invalid sId : sId does not exist in SBML Model.",
validation_iHeight_empty : "Invalid iHeight : iHeight is not optional",
validation_iHeight_not_number : "Invalid iHeight : iHeight must be a number",
validation_iWidth_empty : "Invalid iWidth : iWidth is not optional",
validation_iWidth_not_number : "Invalid iWidth : iWidth must be a number",
validation_position_empty : "Invalid Position : Position value is not optional",
validation_position_iX_not_number : "Invalid Position : Position.iX must be a number",
validation_position_iY_not_number : "Invalid Position : Position.iY must be a number"
}
}
/**
* Model data model data api wont be public anymore
* it is now private to operation and operations will provide convenient wrappers as needed
* Most of the code in this module is either copied or re-factored from apiData.js
* TODO: the module apiData is supposed to go away after restructuring
*/
var modelData = function(){
//ASSUMPTIONS
// if passed data have a invalid values for def params they will assume the defaults
//TODO: make this configurable
var model = null; //must be initialized explicitely by call
var returnThis = {};
/**
* initModel with passed model data
* @param {SBMLModel} model
*/
returnThis.initModel = function(_model){
//assumption is we are gettting weMade model form operations
model = _model;
}
/**
* adds a molecule to the model data(creates new molecule object)
* @param {JSON} moleculeJson containing molecule data
* @returns {Molecule} returns a molecule object
*/
returnThis.addSpecies = function addSpecies (moleculeJson){
//construct molecule
//var molecule =
}
return returnThis;
}
/**
* collection of various utility function to validate/ initialize scomos model data
*/
var modelValidator = d3scomos.modelValidator = {};
/**
* adds and sets up the sParentCompartment property of the compartments
* since sbml v3 outsideCompartment property is removed so added new sParentCompartment property
* @param {object} compartment map
* @retuns updates/adds sParentCompartment property
*/
modelValidator.setComptParents = function setComptParents(compartmentMap){
/**
* Algorithm : findChildren recursively
* for each node inside this node find its children recursively find their children compartments
* algo works on asumption that all compartment will have default as their parent which ensure all them will be visited by their immediate
* parent first
*/
__findAllChildComptRecur(compartmentMap["default"], compartmentMap);
//}
return compartmentMap;
}
/**
* adds and sets up the sParentCompartment property of the compartments
* @param {object} compartment map
* @param {object} compartment object to be updated
* @returns updates sParentCompartment property of compartment
*/
modelValidator.updateComptParents = function updateComptParents(compartmentMap,compartment){
//so the update will happen
//console.log("delete" + delete compartment["sParentCompartment"]);
compartment["sParentCompartment"] = undefined;
//this.setParentCompartment(compartmentMap, needle);
//this.setComptParents(compartmentMap);
modelValidator.setParentCompartment(compartmentMap, compartment);
if(!compartment.sParentCompartment){ //if not set
console.info("failed to set compartment "+compartment.sId + "reverting to default")
compartment.sParentCompartment = "default";
}
}
/**
*sParentCompartmentets up the reaction nodes parent property for the first time
* @param {Object} map of reaction nodes
* @param {Object} compartmentMap map of all the compartments
* @returns sets sParentCompartment of reaction node
*/
modelValidator.setReactionParents = function setReactionParents(reactionNodeMap,compartmentMap){
for(var rId in reactionNodeMap ){
modelValidator.setParentCompartment(compartmentMap, reactionNodeMap[rId]);
}
}
/**
* update reaction nodes parent property
* @param {Object} compartmentMap map of compartment
* @param {Object} reaction object needle to be searched
* @returns sets sParentCompartment of reaction node
*/
modelValidator.updateReactionParents = function updateReactionParents(compartmentMap,reaction){
delete reaction["sParentCompartment"] ;
modelValidator.setParentCompartment(compartmentMap, reaction);
if(!reaction.sParentCompartment) //if not set
reaction.sParentCompartment = "default";
}
/**
* update species complex parent and compartment property
* @param {Object} compartmentMap map of all compartments
* @param {Object} speciesMap map of all species
* @param {species} a species to be updated
* @returns updates the values of sParentCompartment and sCompex
*/
modelValidator.updateSpeciesParents = function updateSpeciesParents(compartmentMap,speciesMap,species){
/**
* find which complex this species belongs to update
* find which compartment it belongs to and update
*TODO : optimize if complex has valid parent cmpt species should simply use that instead of finding anew
*/
//set complex parent
//delete species["sParentCompartment"];//this will force setParent to update the value
//delete species["sParentComplex"];
species["sParentCompartment"] = undefined;
species["sParentComplex"] = undefined;
__setComlexParentSpecies(speciesMap, species);
//update compartment
//TODO : fix it
//this is a hack
modelValidator.setParentCompartment(compartmentMap, species);
if(!species.sParentCompartment) //if not set
species.sParentCompartment = "default";
}
/**
* recursively find children of compartment
* @param cParent
* @param comptMap
*/
function __findAllChildComptRecur(cParent,compartmentMap){
var pId = cParent.sId;
for(var cId in compartmentMap )
{
if(pId !== cId){
if(shapeUtil.hitTest(compartmentMap[pId], compartmentMap[cId])){
//console.log(cId + ' is inSide '+pId);
//dont update if allready set
//if compartment have default set as parent but still passed the hit the test
// it is case of inner compartment tested before outer
//TODO: can be optimized by blocking recursive call in this case
// run it recursively
if(compartmentMap[cId]["sParentCompartment"] === 'default' || compartmentMap[cId]["sParentCompartment"] === "" || compartmentMap[cId]["sParentCompartment"] === undefined){
//valid compartment update
compartmentMap[cId]["sParentCompartment"] = compartmentMap[pId].sId;
//run this function recursively
__findAllChildComptRecur(compartmentMap[cId], compartmentMap);
}
}
}
}
}
/**
* finds parent compartment of any given species
* @param {Object} compartmentMap map of all the compartment
* @param {Object} needle elem to be checked for its
**/
modelValidator.setParentCompartment = function getParentCompartment(compartmentMap,needle){
//start with default this insure all the compartments will be visited at least once
//sanitise the needle
//TODO this is not the place to do this
if(!needle.iHeight || needle.iHeight === 0 )
needle.iHeight = 20;
if(!needle.iWidth || needle.iWidth === 0 )
needle.iWidth = 20;
__findParenCompartment(compartmentMap, compartmentMap['default'], needle);
}
/**
* private function that recursively sets up the parents of passed node
* @param {object} compartmentMap map of all the compartments
* @param {Object} compartment current compartment in consideration
* @param {Object} findThis object to be tested for inside test
*/
function __findParenCompartment(compartmentMap,compartment,findThis){
/**
* Algo :
* for Each compt in this compt call __findParenCompartment
* if findThis.sCompart is not set
* run hitTest(compartment,findThis)
* upate on success
*/
for(var cId in compartmentMap){
//recurse if this compartment is child of compartMent
if(compartment.sId === compartmentMap[cId]["sParentCompartment"]){
//console.log("going recursive for "+cId);
__findParenCompartment(compartmentMap,compartmentMap[cId],findThis);
}
}
if( !findThis["sParentCompartment"] || findThis["sParentCompartment"] === "default"){
if(shapeUtil.hitTest(compartment, findThis)){
//update
findThis["sParentCompartment"]=compartment.sId;
//console.log(findThis.sId + " is in " + compartment.sId);
return;
}
//console.log(findThis.sId + " is not in " + compartment.sId);
}
}
/**
* private function that updates sParentComplex property of the passed species
* @param {object} speciesMap
* @param {object} species needle to be updated
*/
function __setComlexParentSpecies(speciesMap,species){
/**
*TODO: implementation is not assuming case of inner complexes
* to handle inner complexes it will need recursive implementation
*/
for(var sId in speciesMap){
if(speciesMap[sId]["sType"] === 'Complex'){
//perform the hit test if passed then update and return
if(shapeUtil.hitTest(speciesMap[sId], species))
species["sParentComplex"] = sId;
}
}
}
/****** following functions are added after library restructure (third Iteration )******/
/**
* validates molecule for required fields and optional fields if passed
*/
/**
* validates if sId is formed correctly or not
* @param {String} sId
* @returns {Boolean} wheather sId is valid or not
* @throws {customErrors.ValidationError} throws validation error describing validation issue
*/
modelValidator.validate_sId = function(sId){
//TODO name validation later
if(!sId){
throw new customErrors.ValidationError(eskinMessages.error.validation_sId_empty);
}
return true;
}
/**
* validate iHeight parameter
* @param {Number} iHeight
* @returns {Boolean} weather iHeight is well formed
* @throws {customErrors.ValidationError} throws validation error describing validation issue
*/
modelValidator.validate_iHeight = function(iHeight){
if(!iHeight){
throw new customErrors.ValidationError(eskinMessages.error.validation_iHeight_empty);
}
else if(isNaN(iHeight)){
throw new customErrors.ValidationError(eskinMessages.error.validation_iHeight_not_number);
}
return true;
}
/**
* validate iWidth parameter
* @param {Number} iWidth
* @returns {Boolean} weather iWidth is well formed
* @throws {customErrors.ValidationError} throws validation error describing validation issue
*/
modelValidator.validate_iWidth = function(iWidth){
if(!iWidth){
throw new customErrors.ValidationError(eskinMessages.error.validation_iWidth_empty);
}
else if(isNaN(iWidth)){
throw new customErrors.ValidationError(eskinMessages.error.validation_iWidth_not_number);
}
return true;
}
/**
* validate position parameter
* @param {Object} position {iX:Number,iY:Number}
* @returns {Boolean} weather position is valid and well formed
* @throws {customErrors.ValidationError} throws validation error describing validation issue
*
*/
modelValidator.validate_position = function(position){
if(!position){
throw new customErrors.ValidationError(eskinMessages.error.validation_position_empty);
}
if(isNaN(position.iX)){
throw new customErrors.ValidationError(eskinMessages.error.validation_position_iX_not_number);
}
if(isNaN(position.iY)){
throw new customErrors.ValidationError(eskinMessages.error.validation_position_iY_not_number);
}
return true;
}
/**
* validates base object parameters
* @param {Object} options base constructor params
* @returns {Boolean} weather options have valid non optional parameters
* @throws {customErrors.ValidationError} throws validation error describing validation issue
* @throws {TypeError} throws type error if required key is missing
*
*/
modelValidator.validateBase = function(options){
this.validate_sId(options.sId);
this.validate_iHeight(options.iHeight);
this.validate_iWidth(options.iWidth);
this.validate_position(options.position);
return true;
}
/**
* Validates if Edge params are correct
* @param {Species|Reaction} source
* @param {Species|Reaction} target
* @returns {Boolean} true
* @throws {customErrors.ValidationError} throws validation error describing validation issue
*/
modelValidator.validateEdge = function(source,target){
//object must be of type either Species or Reaction
var allowedObjectTypes = ["Species", "Reaction"];
if(allowedObjectTypes.indexOf(source.constructor.name) === -1 ){
throw customErrors.ValidationError("Object of Type : "+source.constructor.name + " cannot be source");
}
if(allowedObjectTypes.indexOf(target.constructor.name) === -1 ){
throw customErrors.ValidationError("Object of Type : "+target.constructor.name + " cannot be target");
}
// source and target must not be same objects
if(source.constructor.name === target.constructor.name){
throw customErrors.ValidationError("Source and target are of same type "+source.constructor.name);
}
return true;
}
/**
* finds the parent and children of current needleCompartment and return the array of indexes of same
* @param {{sId: Compartment}} compartmentMap map of compartments
* @param {Compartment} needle compartment whose parent and children are to be searched
* @returns {{parent : {String}, children : [{String}]}} object containing parent and children of this compartment
*/
modelValidator.getParentAndChildrenOfCompartment = function (compartmentMap,needle){
/**
* Algo : for children id default do
* if needle in thisChild
* add this as a parent
* repeat this for children of thisChild
* break if thisChild have no more children to validated
* else if thisChild in needle
* add thisChild.sId as child of needle
* repeat.
*/
var returnThis = {parent: "default",children :[]};
var parentFound = true;
while(parentFound){
parentFound = false;
//test until you find the parent
var children = compartmentMap[returnThis.parent].getAllChildren();
for(var sId in children)
{
console.log("in for of find children");
var thisCompartment = compartmentMap[children[sId]];
if (!thisCompartment) continue; //if this child is not compartment continue
if(shapeUtil.hitTest(thisCompartment, needle)){
returnThis.parent = thisCompartment.sId;
parentFound = true;
break;
}
else if(shapeUtil.hitTest(needle,thisCompartment)){
//case of other way around add this as a child
returnThis.children.push(thisCompartment.sId);
}
}
}
return returnThis;
}
/**
* returns parents of passed Species ( complex and compartment)
* @param {{sId: Compartment}} compartmentMap map of Compartment
* @param {{sId: Species}} speciesMap map of Species
* @param {Species} needle species of which parents are to be searched
* @returns returns complex
*/
modelValidator.getSpeciesParents = function(compartmentMap,speceisMap,needle){
//------------------------------
//Add type precondtions
//algo for finding parents for species ( complex or otherwise)
/**
* find complex parent first if found to be in complex parent use its sParentCompt
* if not inside the complex find its compartment it belongs to marking it as sParent
*/
var returnThis = {sParentCompartment:null,sParentComplex:null};
var complexParent = speceisMap[needle.sParentComplex];
//case one
if(needle.sParentComplex && complexParent){
returnThis.sParentComplex = complexParent.sId;
returnThis.sParentCompartment = complexParent.sParentCompartment;
return returnThis;
}
else{
//find the complex it belongs
//TODO: for now complex inside complex is not allowed
var complexSpecies = d3.values(speceisMap).filter(function(d){return d.sType === "Complex"});
for(var complId in complexSpecies){
var complex = complexSpecies[complId];
if(shapeUtil.hitTest(complex, needle)){
returnThis.sParentComplex = complex.sId;
returnThis.sParentCompartment = complex.sParentCompartment;
return returnThis;
}
}
}
//standard flow
var returnThis = {sParentCompartment:"default",sParentComplex:null};
var parentFound = true;
while(parentFound){
parentFound = false;
//test until you find the parent
var children = compartmentMap[returnThis.sParentCompartment].getAllChildren();
for(var sId in children)
{
var thisCompartment = compartmentMap[children[sId]];
if (!thisCompartment) continue; //if this child is not compartment continue
if(shapeUtil.hitTest(thisCompartment, needle)){
returnThis.sParentCompartment = thisCompartment.sId;
parentFound = true;
break;
}
}
}
return returnThis;
}
/**
* genenric find parent method : finds parent compartment of any node
* @param {{sId: Compartment}} compartmentMap map of compartments
* @param {Species|Compartment|Reaction} needle node whose parent and children are to be searched
*/
modelValidator.findParentCompartmentOfNode = function (compartmentMap,needle){
var returnThis = {sParentCompartment: "default"};
var parentFound = true;
while(parentFound){
parentFound = false;
//test until you find the parent
var children = compartmentMap[returnThis.sParentCompartment].getAllChildren();
for(var sId in children)
{
var thisCompartment = compartmentMap[children[sId]];
if (!thisCompartment) continue; //if this child is not compartment continue
if(shapeUtil.hitTest(thisCompartment, needle)){
returnThis.sParentCompartment = thisCompartment.sId;
parentFound = true;
break;
}
}
}
return returnThis;
}
'use strict'
/**
* Scomos Selection Set
* Implementation for simple set in javascript which will support scomos graph specific selection
* This is not generic set implementation. This is very specific to scomos model data structure.
*/
// selection set holds the reference to various d3 selections
// also has all basic method a set should have plus has method
// specific to handle needs of the scomos graph model for drawing
// various interactions. Also helps in optimizing events and interactions
/**
* Creates instance of the selection set
* @constructor
* @this selectionSet
* @param data {object or array of object} to be added to current set
* @param hashFunction {function} optional parameter user can pass custom hash function in case non scomos data
*
*/
var scomosSelectionSet = d3scomos.selectionSet = function selectionSet(hashFunction){
/**
* implementation is based on the fact that all the javascript objects are hash maps under the hood
*/
//could be attached to this instance but we want to keep this private (why?)
var __set = {};
var __length=0;
/** set up hasFunction for set **/
hashFunction = hashFunction || __scomosHash;
function __scomosHash (obj){
var returnThis;
if(typeof obj.datum === 'function'){
if(obj.datum().hasOwnProperty('sId'))
returnThis = obj.datum().sId;
else
returnThis = objectHelper.getStringHash.apply(JSON.stringify(obj.datum()));
}
else
{
var str = JSON.stringify(obj);
var hash = 0, i, chr, len;
if (str.length == 0) return hash;
for (i = 0, len = str.length; i < len; i++) {
chr = str.charCodeAt(i);
hash = ((hash << 5) - hash) + chr;
hash |= 0; // Convert to 32bit integer
}
returnThis = hash;
}
return returnThis;
};
/**
* inserts passed to object to set not a array!important
* @param obj {object} object to be inserted
* @returns add and return this obj if this obj does not exist else returns previous object
*/
function __add(obj)
{
var hash = hashFunction(obj);
//add if not contain
if(!__contains(obj)){
__set[hash] = obj;
//update length
__length+=1;
return __set[hash];
}
var previousObject = __set[hash];
//add object to set
__set[hash] = obj;
return previousObject||__set[hash];//handles case of pre array being empty
}
/**
* removes the passed object from set
* @param obj {object} object to be removed from the set
* @returns {object} returns the removed object if any or null
*/
function __remove(obj){
var returnThis = null;
if(obj && __contains(obj)){
returnThis = __set[hashFunction(obj)];
delete __set[hashFunction(obj)];
//update length
__length -=1;
}
return returnThis;
}
/**
* return set element matching with needle if any
*/
function __getItem(needle){
var returnThis = null;
if(needle && __set[needle])
returnThis = __set[needle];
return returnThis
}
/**
* check weather element exist in the set
* @param needle {object} check if this object exist in the selection set
* @return {boolean} whether key exist in the set
*/
function __contains(needle)
{
return __set.hasOwnProperty(hashFunction(needle));
}
//exports
var selectionSet = {};
/**
* get length of the set
* @returns length {Number}
*/
selectionSet.length =function length(){
return __length;
}
/**
* adds passed object or array of object to the set
* @param obj {Array} an object or array of objects
* @returns add and return this obj if this obj does not exist else returns previous object
*/
selectionSet.add = function add(obj){
var returnThis;
/*if(objectHelper.isObject(obj))
{
console.log(" is object ")
returnThis = __add(obj);
}
if(objectHelper.isArray(obj))
{
console.log(" is object ")
for(index in obj){
returnThis = __add(obj[index]);
}
}*/
//implementation will treat all data as object and try and add it
//it is callers responsibility pass appropriate hash function if needs support for arrays
returnThis = __add(obj);
return returnThis;
}
/**
* removes passed object from set if exists
* TODO: should there be key based removal also?
* @param obj {Object} object to be removed
* @returns {Object} removed object if removal succeded otherwise null
*/
selectionSet.remove = function remove(obj){
return __remove(obj);
}
/**
* retrieves object based on the passed needle
* @param needle {String} objectHash to be searched
* @returns found item if any or null
*/
selectionSet.getItem = function getItem(needle){
return __getItem(needle);
}
/**
* applies passed function on each element of selection and returns the selection
* @param fn {function} function to be applied on set elements
* @returns {[Object]} array of objects from set
*/
selectionSet.each = function(fn){
var returnThis = [];
for(var p in __set)
{
if (__set.hasOwnProperty(p)){
//apply function
__set[p] = function(obj){
fn(obj);
return obj;
}(__set[p]);
returnThis.push(__set[p])
}
}
return returnThis;
}
/**
* remove all the element and return array of all removed elements
*/
selectionSet.clear = function clear()
{
var returnThis = [];
for(var p in __set)
{
if (__set.hasOwnProperty(p)){
returnThis.push(__set[p]);
//remove property from set
delete __set[p];
}
}
//update length
__length=0;
return returnThis;
}
//this method is just for testing purposes
selectionSet.getAllItems = function getAllItems(){
return __set;
}
return selectionSet;
}
'use strict'
/**
* scomosTree : Generic tree implementation
*/
/**
* Creates instance of the scomosTree
* @constructor
* @this scomosTree
* @param {string} rootNode string value of root node if not passed uses 'default' string
*/
var scomosTree = d3scomos.scomosTree = function scomosTree(rootNode){
/**
* node structure to store tree nodes
* @class treeNode
* @Constructor
* @param {string} node.value
* @returns a tree node with node.value set and empty list of children
*/
function treeNode(value)
{
this.val = value;
/**{[treeNode]}**/
this.children = [];
//add handling methods
treeNode.prototype.getValue = function getValue(){
return this.val;
}
//add children
/**
* adds treeNode as children to this node
* @param {[treeNode]} array of treeNode
*/
treeNode.prototype.addChild = function addChild(treeNode){
if(treeNodes)
this.children.push(treeNodes);
}
/** removes passed treeNode if exists in children
* @param {treeNode} treeNode object to be removed
* @returns this treeNode if successful deletion else null
*/
treeNode.prototype.removeChild = function removeChild(treeNode)
{
return arrayUtil.removeElement(this.children, treeNode);
}
}
//init some defaults
rootNode = rootNode || 'default';
//tree node internals
var __root = new treeNode(rootNode);
var __length = 1;
//internal functions
/**
* will traverse the tree in preOrder and will return
* @returns level Traversed array
*/
function __traverseBFS(){
//init empty queue
var q = [];
var visited = [];
//visit root
visited.push(__root);
//add root to queue;
q.push(__root);
while(q.length !==0 ){
var thisNode = q.shift();//retrieve front of the queue
//visit thisNode
visited.push(thisNode);
//add its children to queue
thisNode.children.forEach(function(node) {
q.push(node);
});
}
return visited;
}
/**
* find in level Traverse
* @param {array} array of traversed tree nodes
* @returns {Number} index found at or -1 if ot found
*/
function __findNodeInArray(needle,traversedArray){
var foundAt = -1;
for(var i in traversedArray){
if(traversedArray[i].val === needle){
foundAt = i;
break;
}
}
return foundAt;
}
/** export this object **/
var scomosTree = {};
/**
* return the reference of the root element
* @returns {treeNode} returns the treeNode object
*/
scomosTree.getRoot = function getRoot(){
return __root;
}
/**
* appends the newNode to parentNode
* @param {string} newNodeVal value to create new Node with
* @param {string} value of parent node to add to tree if null add to __root
*/
scomosTree.addNode = function addNode(newNodeVal,parentVal){
//set parentNode to point to root
parentVal = parentVal || __root.val;
//add new node
var newNode = new treeNode(newNodeVal);
//traverse tree and add node if found match
scomosTree.findNode(parentVal, function(node){console.log("adding child to");console.log(node);node.children.push(newNode)});
__length +=1;
}
/**
* traverses the tree to find node applies passed function on the found node
* @param {String} needle node value to be searched in tree
* @param {Function} fn function to applied on found elem
* @returns {treeNode} returns the found element after applying the passed function or undefined
*/
scomosTree.findNode = function findNode(needle,fn)
{
//TODO make it better we are traversing the whole tree
var levelNodes = __traverseBFS();
var index = __findNodeInArray(needle, levelNodes);
console.log("found the at index "+index )
if(objectHelper.isFunction(fn)){
//apply function
fn(levelNodes[index]);
}
return levelNodes[index];
}
/** return scomos tree object **/
return scomosTree;
}
/**
* Undo manager module
* Implementation of command pattern in javascript
* TODO: add documentation explaining pattern implementation.
**/
function removeFromTo(array, from, to) {
array.splice(from,
!to ||
1 + to - from + (!(to < 0 ^ from >= 0) && (to < 0 || -1) * array.length));
return array.length;
}
function dispatchUndoManagerEvent (){
eskinDispatch.undoManagerEvent(this);
}
var undoManager = d3scomos.undoManager = function() {
var commands = [],
index = -1,
limit = 15, //defaults to fifteen
isExecuting = false,
callback,
// functions
execute;
execute = function(command, action) {
if (!command || typeof command[action] !== "function") {
return this;
}
isExecuting = true;
command[action]();
isExecuting = false;
return this;
};
return {
/*
Add a command to the queue.
*/
add: function (command) {
if (isExecuting) {
return this;
}
// if we are here after having called undo,
// invalidate items higher on the stack
commands.splice(index + 1, commands.length - index);
commands.push(command);
// if limit is set, remove items from the start
if (limit && commands.length > limit) {
removeFromTo(commands, 0, -(limit+1));
}
// set the current index to the end
index = commands.length - 1;
if (callback) {
callback();
}
return this;
},
/*
Pass a function to be called on undo and redo actions.
*/
setCallback: function (callbackFunc) {
callback = callbackFunc;
},
/*
Perform undo: call the undo function at the current index and decrease the index by 1.
*/
undo: function () {
var command = commands[index];
if (!command) {
return this;
}
execute(command, "undo");
index -= 1;
if (callback) {
callback();
}
dispatchUndoManagerEvent.call(this);
return this;
},
/*
Perform redo: call the redo function at the next index and increase the index by 1.
*/
redo: function () {
var command = commands[index + 1];
if (!command) {
return this;
}
execute(command, "redo");
index += 1;
if (callback) {
callback();
}
dispatchUndoManagerEvent.call(this);
return this;
},
/*
Clears the memory, losing all stored states. Reset the index.
*/
clear: function () {
var prev_size = commands.length;
commands = [];
index = -1;
if (callback && (prev_size > 0)) {
callback();
}
dispatchUndoManagerEvent();
},
hasUndo: function () {
return index !== -1;
},
hasRedo: function () {
return index < (commands.length - 1);
},
getCommands: function () {
return commands;
},
setLimit: function (l) {
limit = l;
}
};
};
/**
* a private module provides one point access to various validation rules
*/
/** a validation rules object **/
var validationRules = {};
//add validation rules to this object
/**
* Base object from which other SBML entities will extend
* Note : this is not compliant with SBML class hierarchy
*
**/
/**
*Construct sBase Object using options(sId,sName,position,height,width,color)
*@constructor
*@param {Object} options this contains various optional and non-optional params
*@returns {sBase} sBaseObject
*@throws {customErrors.ValidationError} for invalid input params
*@throws {TypeError} if expected key is missing in object
*/
function Base(options){
//assumptions
//non-optional parameters : sId,iHeight,iWidth,position[iX,iY]
//optional-fields :sName,sParentCompartment
/** validate non optional fields **/
modelValidator.validateBase(options);
//seems all is fine build the object
this.sId = options.sId;
this.sName = options.sName || this.sId;
this.iHeight = options.iHeight;
this.iWidth = options.iWidth;
this.position = options.position;
//TODO: bit fishy. Should this be reported?
this.sParentCompartment = options.sParentCompartment || "default";
return this;
}
Base.prototype.getEntityType = function(){
if(this.constructor.name)
return this.constructor.name;
/**
* Hack for IEs lack of function name property
* @param {[type]} [^(]{1,} [description]
* @return {[type]} [description]
*/
var funcNameRegex = /function\s([^(]{1,})\(/;
var results = (funcNameRegex).exec((this.constructor).toString());
return (results && results.length > 1) ? results[1].trim() : "";
}
/**
* Class : Compartment
*/
//inherits from Base
/**
* Constructs the Compartment object
* @constructor
* @param options
* @returns {Compartment}
*/
function Compartment(options){
//call to super constructor
Base.call(this,options);
/*
* bConstant: false
color: {iRed: 242, iGreen: 242, iBlue: 192, iAlfa: 255}
dSize: 1
iHeight: 1987 -->Base
iSpatialDimensions: 3
iWidth: 2083 -->Base
position: {iX: -249, iY: 78} -->Base
sId: "C_1" -->Base
sName: "CELL" -->Base
sNote: ""
sParentCompartment: "default" -->Base
sRepresents: "CellType"
sType: "RECTANGULAR"
sUnit: ""
*/
this.bConstant = options.bConstant || false;
this.color = options.color || {iRed: 219, iGreen: 224, iBlue: 224, iAlfa: 255};
this.dSize = options.dSize || 1;
this.iSpatialDimensions = options.iSpatialDimensions || 3;//TODO:verify assumptions
this.sNote = options.sNote || "";
this.sRepresents = options.sRepresents || "CellType";
this.sQuantityType = options.sQuantityType || "Concentration";
this.sUnit = options.sUnit || "litre (Pathway Map Default)";
//TODO : verify this assumption
//also should this be alerted to user?
this.sType = options.sType || "RECTANGULAR";
/** hidden properties **/
var children = []; /** not a SBML property **/
this.getAllChildren = function(){return children;}
this.addChild = function(sId){
return children.indexOf(sId) === -1 ?children.push(sId):-1;
}
this.removeChild = function(sId){
if(children.indexOf(sId) !== -1)
return children.splice(children.indexOf(sId), 1);
return null;
}
}
//setup inheritance ( prototype chain )
Compartment.prototype = Object.create(Base.prototype);
Compartment.prototype.constructor = Compartment; // Reset the constructor from Base to Compartment
/**
* Class : Edge
* Edge class not derived form Base as this is not standard SBML construct
* Also this has considerable difference than other View Object
*/
/**
* Construct a Edge object using the Source and Target ( can be either species or reaction)
* @constructor
* @param {Species|Reaction} source
* @param {Species|Reaction} target
* @param {String} role
* @param {{options}} options additional options for initializing the edge
* @returns {Edge} returns the edge object
* @throws {customErrors.ValidationError} throws error if invalid edge data
*/
function Edge(source,target,role,options){
//validates param
/*assumptions
* source and target can be either species or reaction
* but they cannot be same i.e. cannot have edge between two species or reaction
* sId will be constructed source->sId_target->sId
*/
//validate parmas
modelValidator.validateEdge(source,target);
this.sId = source.sId+":"+target.sId;
this.role = role.toUpperCase();
this.source = source;
this.target = target;
this.color = options.color || SBMLConstants.objectDefaults.edgeColor;
this.speciesName = options.speciesName;
this.getColorString = function(){
//return "rgb("+this.color.iRed+","+this.color.iGreen+","+this.color.iBlue+")";
return SBMLConstants.colorConstants[this.getParentReaction().sType.toUpperCase()];
}
//TODO: Edge object needs to be conditionally initialized
//i.e. based on role of edge it will have more property setters
//like modifier will not have setConstant property
if(this.role === 'PRODUCT' || this.role === 'REACTANT'){
//TODO: what are the meaningful defaults for following varibales
this.rStoichiometry = options.rStoichiometry || 1;
this.bConstant = options.bConstant || false;
if(this.role === 'REACTANT'){
//set up reversible this property is available for reactioants only
this.isReversible = options.isReversible || false;
//setter for isReversible
/**
* sets isReversible property of the edge
* @param {Boolean} val
* @return {Boolean} returns the updates value
* @throws {customErrors.ValidationError} if invalid value is passed
*/
this.setReversible = function(val){
//TODO: add validation
this.isReversible = value;
this.target.isReversible = value;
return this.isReversible;
}
}
//setters
/**
* updates the stoichiometry constant value
* @param {Number} value stoichiometry constant
* @return {Number} rturns newly set value
* @throws {customErrors.validation} if invalid constant value provied throws the error
*/
this.setStoichiometry = function(value){
//TODO: add validation
this.rStoichiometry = value;
if(this.role === 'PRODUCT'){
this.source.rStoichiometry = value;
}
else if(this.role === 'REACTANT'){
this.target.rStoichiometry = value;
}
return this.rStoichiometry;
}
/**
* setConstant set the bConstant value
* @param {Boolean} value
* @return {Boolean} returns the updted value
* @throws {customErrors.validation} if invalid constant value provied throws the error
*/
this.setConstant = function(value){
//TODO: add validation
this.bConstant = value;
if(role === 'PRODUCT'){
this.source.bConstant = value;
}
else if(role === 'REACTANT'){
this.target.bConstant = value;
}
return this.bConstant;
}
}
else if(this.role === 'MODIFIER'){
this.sModifierType = options.sModifierType
//TODO: add vaidations to see if this is valid modifierType
this.setModifierType = function(newModifierType){
this.getParentReaction().mapModifiers[this.getParentSpecies().sId]
.sModifierType = newModifierType;
}
}
//whenever a edge is created add back references
this.source.addEdge(this);
this.target.addEdge(this);
return this;
}
//TODO: add helper methods to help draw and manipulate edges
Edge.prototype.getEntityType = function(){
if(this.constructor.name)
return this.constructor.name;
/**
* Hack for IEs lack of function name property
* @param {[type]} [^(]{1,} [description]
* @return {[type]} [description]
*/
var funcNameRegex = /function\s([^(]{1,})\(/;
var results = (funcNameRegex).exec((this.constructor).toString());
return (results && results.length > 1) ? results[1].trim() : "";
}
/**
* remove this edge references from its parents
* @return {} remove edge from parents
*/
Edge.prototype.removeFromParents = function(){
this.target.removeEdge(this);
this.source.removeEdge(this);
}
Edge.prototype.addEdgeToParents = function(){
this.source.addEdge(this);
this.target.addEdge(this);
}
/**
* get the parent reaction node for this edge
* @return {Reaction} parent reaction node
*/
Edge.prototype.getParentReaction = function(){
// if(this.role === 'REACTANT')
// return this.target;
// return this.source;
return this.source.getEntityType() === 'Reaction'? this.source:this.target;
}
/**
* get the parent species node for this edge
* @return {Species} parent species node
*/
Edge.prototype.getParentSpecies = function(){
// if(this.role === 'REACTANT')
// return this.source;
// return this.target;
return this.source.getEntityType() === 'Species'? this.source:this.target;
}
/**
* Class : Reaction
*
*/
/**
* Creates the Reaction object. (Inherits form Base)
*/
function Reaction (options){
//call to super constructor
Base.call(this,options);
/**
* bIsReactionFast: false
bIsReversible: false
color: {iRed: 0, iGreen: 0, iBlue: 0, iAlfa: 255}
mapModifierIdToModifierType: {}
mapModifiers: {}
mapProducts: {S_3: {bConstant: false, rStoichiometry: 1, sSpeciesRole: "Product", sModifierType: ""}}
mapReactants: {S_1: {bConstant: false, rStoichiometry: 1, sSpeciesRole: "Reactant", sModifierType: ""},…}
position: {iX: 576, iY: 270}
sId: "R_1"
sKineticLaw: ""
sName: "R_1"
this.sNote = ""
sType: "GENERALREACTION"
**/
//private data variable to store edges
/**
* stores all the edges related to this reactions by categoreis
* @type {{modifiers:[Edge],products:[Edge],reactants:[Edge]}}
*/
var edges = {
modifiers:[],
products:[],
reactants:[]
}
/**
* Builds the edge map and updates the edges structure
* @return {} builds edges structure
* @param {map[speceis]} speciesMap
* @throws {customErrors.ValidationError} if edges is missing required params or is breaking edge formation rules
*
*/
var buildEdgeMap = function(speciesMap){
//build modifiers map
//build products
//reset the edge collection.
edges.modifiers = [];
edges.products = [];
edges.reactants = [];
var thisReaction = this;
var _color = "rgb("+thisReaction.color.iRed+","+thisReaction.color.iGreen+","+thisReaction.color.iBlue+")";
//assume this node as source node
// find product nodes and add them as targets
//mapProducts: {Species_2: {bConstant: true, rStoichiometry: 1, sSpeciesRole: "Product", sModifierType: ""}}
var mapProducts = thisReaction.mapProducts;
for(var sId in mapProducts){
var _targetNode = speciesMap[sId];
if(!_targetNode)
throw new customErrors.ValidationError("Reaction : build edge failed. Reason : target Species "+sId + " does not exist in specis map.");
var thisEdge = mapProducts[sId];
//add sName of __sourceNode to map
thisEdge['sName'] = _targetNode.sName;
//var sId = thisReaction.sId+':'+_targetNode.sId;
var _role = thisEdge['sSpeciesRole'];
var _stoichiometry = thisEdge['rStoichiometry'];
var _constant = thisEdge['bConstant'];
//build product edge
var options = {
'rStoichiometry':_stoichiometry,
'bConstant':_constant,
'color':thisReaction.color,
'speciesName': thisEdge['sName']
}
var pEdge = new Edge(thisReaction,_targetNode,_role,options);
edges.products.push(pEdge);
}
//build reactants
var mapReactants = thisReaction.mapReactants;
for(var sId in mapReactants){
var _sourceNode = speciesMap[sId];
if(!_sourceNode)
throw new customErrors.ValidationError("Reaction : build edge failed. Reason : source Species "+sId + " does not exist in specis map.");
var thisEdge = mapReactants[sId];
//add sName of __sourceNode to map
thisEdge['sName'] = _sourceNode.sName;
//var _sId = _sourceNode.sId+':'+thisReaction.sId;
var _role = thisEdge['sSpeciesRole'];
var _stoichiometry = thisEdge['rStoichiometry'];
var _constant = thisEdge['bConstant'];
var _isReversible = thisEdge['isReversible'] || false;
//build product edge
var options = {
'rStoichiometry':_stoichiometry,
'bConstant':_constant,
'isReversible':_isReversible,
'color':thisReaction.color,
'speciesName': thisEdge['sName']
}
var rEdge = new Edge(_sourceNode,thisReaction,_role,options);
edges.reactants.push(rEdge);
}
//build modifiers
var mapModifiers = thisReaction.mapModifiers;
for(var sId in mapModifiers){
var _sourceNode = speciesMap[sId];
if(!_sourceNode)
throw new customErrors.ValidationError("Reaction : build edge failed. Reason : source Species "+sId + " does not exist in specis map.");
var thisEdge = mapModifiers[sId];
//add sName of __sourceNode to map
thisEdge['sName'] = _sourceNode.sName;
//var _sId = _sourceNode.sId+':'+thisReaction.sId;
var _role = thisEdge['sSpeciesRole'];
var _modifierType = thisEdge['sModifierType'];
//build product edge
var options = {
'color':thisReaction.color,
'sModifierType':_modifierType,
'speciesName': thisEdge['sName']
}
var mEdge = new Edge(_sourceNode,thisReaction,_role,options);
edges.modifiers.push(mEdge);
}
}
this.bIsReactionFast = options.bIsReactionFast || false;
this.bIsReversible = options.bIsReversible || false;
this.color = options.color || {iRed: 0, iGreen: 0, iBlue: 0, iAlfa: 255} ;//this is for general reactions only
//TODO : following three params need validation
this.mapModifiers = options.mapModifiers || {};
this.mapProducts = options.mapProducts || {};
this.mapReactants = options.mapReactants || {};
this.mapModifierIdToModifierType = options.mapModifierIdToModifierType || {}
this.sKineticLaw = options.sKineticLaw || "";
//TODO : this value drives the color value add handler function
this.sType = options.sType || "General";
this.sNote = options.sNote || "";
// [{id:String,title:string,journal:string,volume:String,pages:String,dop:string,author:string}]
this.sPubMedReferences = options.sPubMedReferences || [];
this.updateEdges = function(speciesMap){
if(!speciesMap)
throw new customErrors.ValidationError("Reaction - method updateEdges :missing non optional param speciesMap");
buildEdgeMap.call(this,speciesMap);
}
this.getReactantEdges = function(){
return edges.reactants;
}
this.getProductEdges = function(){
return edges.products;
}
this.getModifierEdges = function(){
return edges.modifiers;
}
this.getAllEdges = function(){
var returnThis = [];
edges.reactants.forEach(function(edge){returnThis.push(edge)});
edges.products.forEach(function(edge){returnThis.push(edge)});
edges.modifiers.forEach(function(edge){returnThis.push(edge)});
return returnThis;
}
/**
* returns all the connected species
* @return {[Species]} returns all the connected species.
*/
this.getAllconnectedSpecies = function(){
return this.getAllEdges().map(function(edge){return edge.getParentSpecies()});
}
/**
* returns ID of all the connected species to this reactions.
* @return {[String]} [description]
*/
this.getAllConnectedSpeciesId = function(){
var returnThis=[];
returnThis = returnThis.concat(d3.keys(this.mapProducts));
returnThis = returnThis.concat(d3.keys(this.mapModifiers));
returnThis = returnThis.concat(d3.keys(this.mapReactants));
return returnThis;
}
/**
* returns if said sId exists as part of any of the interaction on this reaction.
* @param {String} sId sid to be checked.
* @return {Boolean} species exists or not.
*/
this.checkSpeicesId = function(sId){
return this.getAllConnectedSpeciesId().indexOf(sId) != -1;
}
/**
* adds edge to the reaction edgeList.
* @param {Edge} edge edge object to be added.
* @return {} Adds edge to appropriate collection.
*/
this.addEdge = function(edge){
//find the type of edge and push edge accordingly if it does not exist
//build the object to add
var _edgeObj = {bConstant: edge.bConstant, rStoichiometry: edge.rStoichiometry,
sSpeciesRole:edge.role, sModifierType: edge.sModifierType,
sName: edge.speciesName
}
var source = edge.source;
var target = edge.target;
switch (edge.role) {
case 'PRODUCT':
//{bConstant: false, rStoichiometry: 1, sSpeciesRole: "Product", sModifierType: "", sName: "H2O"}
if(!this.mapProducts.hasOwnProperty(target.sId)){
this.mapProducts[target.sId] = _edgeObj;
edges.products.push(edge);
}
break;
case 'REACTANT':
//{bConstant: false, rStoichiometry: 1, sSpeciesRole: "Reactant", sModifierType: "", sName: "GSH"}
if(!this.mapReactants.hasOwnProperty(source.sId)){
this.mapReactants[source.sId] = _edgeObj;
edges.reactants.push(edge);
}
break;
case 'MODIFIER':
//{bConstant: false, rStoichiometry: -1, sSpeciesRole: "Modifier", sModifierType: "Activator", sName: "GPX4"}
//{bConstant: false, rStoichiometry: 1, sSpeciesRole: "Reactant", sModifierType: "", sName: "GSH"}
if(!this.mapModifiers.hasOwnProperty(source.sId)){
this.mapModifiers[source.sId] = _edgeObj;
edges.modifiers.push(edge);
}
break;
default:
__logger.warn('Reaction - addEdge failed. Reason - Invalid Edge Role type : '+edge.role);
}
//console.warn('added edge '+this.getAllEdges().map(function(d){return d.sId}));
}
/**
* remove edge from this reaction based on the edge sId
* @param {Edge} sId edge id to be removed
* @return {Edge} removed edge or undefined if not found
*/
this.removeEdge = function(edge){
var spliced;
var source = edge.source;
var target = edge.target;
console.warn(edge.role);
switch (edge.role) {
case 'PRODUCT':
//{bConstant: false, rStoichiometry: 1, sSpeciesRole: "Product", sModifierType: "", sName: "H2O"}
if(this.mapProducts.hasOwnProperty(target.sId)){
var isProductDeleted = delete this.mapProducts[target.sId];
__logger.warn('Reaction removeEdge : Delete Product '+target.sId + ' status : '+isProductDeleted);
var edgeCollection = edges.products;
for(var i = 0; i < edgeCollection.length; i++) {
if(edgeCollection[i].sId === edge.sId) {
spliced = edgeCollection.splice(i, 1);
break;
}
}
}
break;
case 'REACTANT':
//{bConstant: false, rStoichiometry: 1, sSpeciesRole: "Reactant", sModifierType: "", sName: "GSH"}
if(this.mapReactants.hasOwnProperty(source.sId)){
var isReactantDeleted = delete this.mapReactants[source.sId];
__logger.warn('Reaction removeEdge : Delete Reactant '+source.sId + ' status : '+isReactantDeleted);
var edgeCollection = edges.reactants;
for(var i = 0; i < edgeCollection.length; i++) {
if(edgeCollection[i].sId === edge.sId) {
spliced = edgeCollection.splice(i, 1);
break;
}
}
}
break;
case 'MODIFIER':
console.warn('deleting MODIFIER');
//{bConstant: false, rStoichiometry: -1, sSpeciesRole: "Modifier", sModifierType: "Activator", sName: "GPX4"}
//{bConstant: false, rStoichiometry: 1, sSpeciesRole: "Reactant", sModifierType: "", sName: "GSH"}
if(this.mapModifiers.hasOwnProperty(source.sId)){
var isModifierDeleted = delete this.mapModifiers[source.sId];
__logger.warn('Reaction removeEdge : Delete Modifier '+source.sId + ' status : ' + isModifierDeleted);
var edgeCollection = edges.modifiers;
for(var i = 0; i < edgeCollection.length; i++) {
if(edgeCollection[i].sId === edge.sId) {
spliced = edgeCollection.splice(i, 1);
break;
}
}
}
break;
}
console.warn(spliced);
return spliced;
}
/**
* add new product to this reaction.
* @param {Object} options add product options.
* @return {} adds the product to the reaction.
* @throws {customErrors.ValidationError} if sId is not passed TODO: need to validate if sId actully exists in the model.
*/
this.addProduct = function(options){
//bConstant:false rStoichiometry:1 sModifierType:"" sSpeciesRole: "Product"
if(!options.hasOwnProperty('sId'))
throw new customErrors.ValidationError(eskinMessages.validation_sId_empty);
if(this.checkSpeicesId(options.sId))
throw new customErrors.ValidationError("Interaction with sId : " + options.sId + " allready exists.");
//init defaults
var _options = {};
_options.bConstant = options.bConstant || false;
_options.rStoichiometry = options.rStoichiometry || 1;
_options.sModifierType = "";
_options.sSpeciesRole = "Product";
this.mapProducts[options.sId] = _options;
}
/**
* removes the specified product from the reactions product map.
* @param {String} productSId product to be removed.
* @return {Object | null} Removed product object, null if product no t found.
*/
this.removeProduct = function(productSId){
var thisProduct = this.mapProducts[productSId];
if(thisProduct){
if(delete this.mapProducts[productSId]){
return thisProduct;
}
}
return null;
}
/**
* add new reactant to this reaction.
* @param {Object} options add reactant options.
* @return {} adds the reactant to the reaction.
* @throws {customErrors.ValidationError} if sId is not passed TODO: need to validate if sId actully exists in the model.
*/
this.addReactant = function(options){
//bConstant:false rStoichiometry:1 sModifierType:"" sSpeciesRole: "Product"
if(!options.hasOwnProperty('sId'))
throw new customErrors.ValidationError(eskinMessages.validation_sId_empty);
if(this.checkSpeicesId(options.sId))
throw new customErrors.ValidationError("Interaction with sId : " + options.sId + " allready exists.");
//init defaults
var _options = {};
_options.bConstant = options.bConstant || false;
_options.rStoichiometry = options.rStoichiometry || 1;
_options.sModifierType = "";
_options.sSpeciesRole = "Reactant";
this.mapReactants[options.sId] = _options;
}
/**
* removes the specified reactant from the reactions reactin map.
* @param {String} reactantSId reactant to be removed.
* @return {Object | null} Removed reactant object, null if product no t found.
*/
this.removeReactant = function(reactantSId){
var thisReactant = this.mapReactants[reactantSId];
if(thisReactant){
if(delete this.mapReactants[reactantSId]){
return thisReactant;
}
}
return null;
}
/**
* adds the modifier.
* @param {{sId:String,sSpeciesRole:string}} options options to construct this modifier. SID is cumpolsory others are optional
* @return {} adds new entry to modifer map.
*/
this.addModifier = function(options){
//bConstant:false rStoichiometry:-1 sModifierType: "Activator" sName : "GSTA4" sSpeciesRole : "Modifier"
if(!options.hasOwnProperty('sId'))
throw new customErrors.ValidationError(eskinMessages.validation_sId_empty);
if(this.checkSpeicesId(options.sId))
throw new customErrors.ValidationError("Interaction with sId : " + options.sId + " allready exists.");
//init defaults
var _options = {};
_options.bConstant = options.bConstant || false;
_options.rStoichiometry = options.rStoichiometry || -1;
_options.sModifierType = options.sModifierType || "Activator"; //if other type of modifier is required please specify in the options.
_options.sSpeciesRole ="Modifier";
this.mapModifiers[options.sId] = _options;
}
/**
* removes the specified Modifier from the reactions modifier map.
* @param {String} modifierSId modifier to be removed.
* @return {Object | null} Removed modifier object, null if product no t found.
*/
this.removeModifier = function(modifierSId){
var thisModifier = this.mapModifiers[modifierSId];
if(thisModifier){
if(delete this.mapModifiers[modifierSId]){
return thisModifier;
}
}
return null;
}
}
//setup inheritance ( prototype chain )
Reaction.prototype = Object.create(Base.prototype);
Reaction.prototype.constructor = Reaction; // Reset the constructor from Base to Reaction
/**
* Implementation of Factory pattern to create various objects required
* for eskin model construction
**/
//TODO figure out how to unit test factory pattern
var SBMLFactory = d3scomos.SBMLFactory = function SBMLFactory (){
/** return this **/
var factory = {};
var factoryProto = factory.prototype;
/**
* SBMLModel
*/
factory.getSBMLModel = function(options){
return new SBMLModel(options);
}
/** expose the SBML object constructors **/
factory.getBase = function(options){
return new Base(options);
}
factory.getSpecies = function(options){
return new Species(options);
}
factory.getCompartment = function(options){
return new Compartment(options);
}
factory.getReaction = function(options){
return new Reaction(options);
}
factory.getEdge = function(source,target,role,options){
return new Edge(source,target,role,options);
}
return factory;
}
/**
* creates minimal sbmlModel Object
* @constructor
* @param {Object} options init params for sbml model
* @throws ValidationError {@link Error}
* @returns a SBMLModel Object
*/
function SBMLModel(options){
//validate fields here first
modelValidator.validate_sId(options.sId);
this.sId = options.sId;
this.sName = options.sName || this.sId;
this.lstFunctionDefinitions = options.lstFunctionDefinitions || [];
this.lstGlobalParameters = options.lstGlobalParameters || [];
this.lstSBMLErrorMessage = options.lstSBMLErrorMessage || [];
//default compartment received in json will be ignored
//instead library will create its own default compartment and keep updating bounds as new elems are added
var defCompart = SBMLFactory().getCompartment({sId:"default",iHeight:500,iWidth:500,position:{iX:0,iY:0}});
this.mapCompartmentLayouts = {"default":defCompart};
this.mapReactionLayouts = {};
this.mapSpeciesLayouts = {};
this.modelUnitDefination = options.modelUnitDefination || {};
this.sModelAttachments = options.sModelAttachments || "";
this.sNotes = options.sNotes || "";
this.sOrganismType = options.sOrganismType || "Homo sapiens";
return this;
}
/** additional methods to the SBML model will go here **/
SBMLModel.prototype.getEntityType = function(){
return "SBMLModel";
}
/**
* Adds species object to species map
* @param {Species} species
* @throws {TypeError} if parameter of non species type is passed
*/
SBMLModel.prototype.addSpecies = function(species){
//{sParentCompartment:null,sParentComplex:null};
var parents = modelValidator.getSpeciesParents(this.mapCompartmentLayouts,this.mapSpeciesLayouts,species);
var complexParent = this.mapSpeciesLayouts[species.sParentComplex];
//case has parentComplex
if(parent.sParentComplex){
if(species.sParentCompartment!==parents.sParentCompartment)
__logger.info("changed parent compartment of Species "+species.sId + " From " + species.sParentCompartment + " to "+parents.sParentCompartment);
}
//case no parent complex
else{
if(species.sParentComplex !== parents.sParentComplex)
__logger.info("changed complex parent of Species "+species.sId + " From " + species.sParentComplex + " to "+parents.sParentComplex);
if(species.sParentCompartment!==parents.sParentCompartment)
__logger.info("changed parent of Species "+species.sId + " From " + species.sParentCompartment + " to "+parents.sParentCompartment);
}
species.sParentCompartment = parents.sParentCompartment;
species.sParentComplex = parents.sParentComplex;
this.mapCompartmentLayouts[species.sParentCompartment].addChild(species.sId);
this.mapSpeciesLayouts[species.sId] = species;
__logger.info("Species with sID : " + species.sId + " added successfully.");
}
/**
* Adds Compartment object to Compartment map
* @param {Compartment} compartment
* @throws {TypeError} if parameter of non species type is passed
*/
SBMLModel.prototype.addCompartment = function(compartment){
//precondition parentCompartment validation ( no compartment means default )
var tree = modelValidator.getParentAndChildrenOfCompartment(this.mapCompartmentLayouts, compartment);
//log in case change of parent
if(compartment.sParentCompartment!==tree.parent)
__logger.info("changed parent of compartment "+compartment.sId + " From " + compartment.sParentCompartment + " to "+tree.parent);
compartment.sParentCompartment = tree.parent;
this.mapCompartmentLayouts[tree.parent].addChild(compartment.sId);
for(var sId in tree.children){
compartment.addChild(sId)
};
this.mapCompartmentLayouts[compartment.sId] = compartment;
//post processing(validation)
//validate parents
__logger.info("Compartment with sID : " + compartment.sId + " added successfully.");
}
/**
* Adds reaction object to reaction map
* @param {Reaction} reaction
* @throws {TypeError} if parameter of non species type is passed
*/
SBMLModel.prototype.addReaction = function(reaction){
//Precondition : find parent of this reaction
var parent = modelValidator.findParentCompartmentOfNode(this.mapCompartmentLayouts,reaction);
reaction.sParentCompartment = parent.sParentCompartment;
this.mapReactionLayouts[reaction.sId] = reaction;
__logger.info("Reaction with sID : " + reaction.sId + " added successfully.");
reaction.updateEdges(this.mapSpeciesLayouts);
}
/**
*Builds edges (could end up removing some reaction if they happen to be invalid);
*/
SBMLModel.prototype.buildEdges = function(){
//TODO: put builds
}
/**
* Updates default compartment boundaries
* @return {[type]} [description]
*/
SBMLModel.prototype.updateModelBoundaries = function(stickyChanges){
var margin = 15;
stickyChanges = stickyChanges || false;
var chldrnOfDefault = [];
// function getChldrenOfDefault(arrNodes){
// var returnThis = [];
// arrNodes.map(function(node){if(node.sParentCompartment === 'default') returnThis.push(node)});
// return returnThis;
// }
//get all children of default
//compartment
d3.values(this.mapCompartmentLayouts).map(function(node){if(node.sParentCompartment === 'default' && node.sName !== 'default') chldrnOfDefault.push(node)});
//speceis
d3.values(this.mapSpeciesLayouts).map(function(node){if(node.sParentCompartment === 'default') chldrnOfDefault.push(node)});
//Reaction
d3.values(this.mapReactionLayouts).map(function(node){if(node.sParentCompartment === 'default') chldrnOfDefault.push(node)});
//and calculate exreme boundsn
var defCompart = this.mapCompartmentLayouts['default'];
//{sId:"default",iHeight:500,iWidth:500,position:{iX:0,iY:0}}
var minTop = defCompart.position.iX;
var minLeft = defCompart.position.iX;
var minBottom = defCompart.iWidth;
var minRight = defCompart.iHeight;
//---------------------------
/*
int xMin = int32Rects.Min(s => s.X);
int yMin = int32Rects.Min(s => s.Y);
int xMax = int32Rects.Max(s => s.X + s.Width);
int yMax = int32Rects.Max(s => s.Y + s.Height);
var int32Rect = new Int32Rect(xMin, yMin, xMax - xMin, yMax - yMin);
*/
var xMin = d3.min(chldrnOfDefault.map(function(d){return d.position.iX}))
var xMax = d3.max(chldrnOfDefault.map(function(d){return d.position.iX + d.iWidth}))
var yMin = d3.min(chldrnOfDefault.map(function(d){return d.position.iY}))
var yMax = d3.max(chldrnOfDefault.map(function(d){return d.position.iY + d.iHeight}))
var returnThis = { top : (xMin || 0) - 100,
left : (yMin || 0) -100,
width : d3.max([xMax - xMin,400]),
height : d3.max([yMax - yMin,600]),
};
if(stickyChanges){
alert(stickyChanges)
defCompart.iHeight = d3.max([returnThis.height,700]);
defCompart.iWidth = d3.max([returnThis.width,500]);
defCompart.position = {iX:returnThis.top,iY:returnThis.left};
returnThis.width = defCompart.iWidth;
returnThis.height = defCompart.iHeight;
}
//
returnThis.width += 100;
returnThis.height += 100;
return returnThis;
}
/**
* removes the node from mapSpeciesLayouts
* @param {string} sId sId of species to be removed
* @return {boolean} deletion status
*/
SBMLModel.prototype.removeSpecies = function(sId){
var mapSpeciesLayouts = this.mapSpeciesLayouts;
//if(mapSpeciesLayouts.hasOwnProperty(sId)){
return delete mapSpeciesLayouts[sId];
//}
//return false;
}
SBMLModel.prototype.removeReaction = function(sId){
var mapReactionLayouts = this.mapReactionLayouts;
//if(mapSpeciesLayouts.hasOwnProperty(sId)){
//TODO: is it required to remove edge reference from invloved species node
return delete mapReactionLayouts[sId];
}
SBMLModel.prototype.removeCompartment = function(sId){
var mapCompartmentLayouts = this.mapCompartmentLayouts;
//if(mapSpeciesLayouts.hasOwnProperty(sId)){
//TODO: is it required to remove edge reference from invloved species node
return delete mapCompartmentLayouts[sId];
}
/**
* Updates the reaction edge map
* @param {String} sId sId of reactio to be updated.
* @return {Reaction} updated reaction object
* @throws {customErrors.ValidationError} if invalid reaction sId is provided
*/
SBMLModel.prototype.updateReactionEdges = function(sId){
var mapReactionLayouts = this.mapReactionLayouts;
if(!mapReactionLayouts.hasOwnProperty(sId))
throw new customErrors.ValidationError(eskinMessages.error.validation_sId_does_not_exist);
mapReactionLayouts[sId].updateEdges(this.mapSpeciesLayouts);
}
/**
* Interates through all the nodes and corrects child parent relationship
* @return {[type]} [description]
*/
SBMLModel.prototype.refreshNodeRelations = function(){
for(var compartmentsId in this.mapCompartmentLayouts){
//precondition parentCompartment validation ( no compartment means default )
var compartment = this.mapCompartmentLayouts[compartmentsId];
var tree = modelValidator.getParentAndChildrenOfCompartment(this.mapCompartmentLayouts, compartment);
compartment.sParentCompartment = tree.parent;
//TODO: figure this shit out. Why this goes in infinite loop
//this.mapCompartmentLayouts[tree.parent].addChild(compartment.sId);
// for(var sId in tree.children){
// compartment.addChild(sId)
// };
//
//console.warn(tree);
}
for(var speciesId in this.mapSpeciesLayouts){
var species = this.mapSpeciesLayouts[speciesId];
species.sParentComplex = null;
var parents = modelValidator.getSpeciesParents(this.mapCompartmentLayouts,this.mapSpeciesLayouts,species);
var complexParent = this.mapSpeciesLayouts[species.sParentComplex];
if(parents.sParentComplex){
//console.warn(parents);
//console.warn(species);
}
species.sParentCompartment = parents.sParentCompartment;
species.sParentComplex = parents.sParentComplex;
this.mapCompartmentLayouts[species.sParentCompartment].addChild(species.sId);
}
for(var reactionsId in this.mapReactionLayouts){
var reaction = this.mapReactionLayouts[reactionsId];
var parent = modelValidator.findParentCompartmentOfNode(this.mapCompartmentLayouts,reaction);
reaction.sParentCompartment = parent.sParentCompartment;
this.mapReactionLayouts[reaction.sId] = reaction;
}
}
/**
* returns the object by sid if found.
* @param {String} sId sId of the node to be searched.
* @return {instanceof Base} returns the object node if found.
*/
SBMLModel.prototype.getNodeObjectBySId = function(sId){
//look for the node in species.
//object could be model
if(sId === this.sId) return this;
//object could be edge
if(sId.indexOf(':') > -1){
//find reaction node
var reactionParents = sId.split(':');
var reactantSid = this.mapReactionLayouts[reactionParents[0]] ?
this.mapReactionLayouts[reactionParents[0]] : this.mapReactionLayouts[reactionParents[1]];
return reactantSid.getAllEdges().filter(function(d){return d.sId === sId})[0];//filter returns array.
}
if(this.mapSpeciesLayouts.hasOwnProperty(sId)) return this.mapSpeciesLayouts[sId];
if(this.mapCompartmentLayouts.hasOwnProperty(sId)) return this.mapCompartmentLayouts[sId];
if(this.mapReactionLayouts.hasOwnProperty(sId)) return this.mapReactionLayouts[sId];
return null;
}
/**
* applys drag i.e. updates position and dimensions of nodes.
* @param {{sId:{iHeight:Number,iWidth:Number,position:{iX:Number,iY:Number}}}} dragValues [description]
* @return {} finds the node in various maps and applies provided values.
*/
SBMLModel.prototype.applyDrag = function(dragValues){
var speciesSIds = d3.keys(this.mapSpeciesLayouts);
var compartmentSIds = d3.keys(this.mapCompartmentLayouts);
var reactionSIds = d3.keys(this.mapReactionLayouts);
var thisModel = this;
d3.keys(dragValues)
.forEach(function(sId){
var thisNode;
var dragNode = dragValues[sId]
if(speciesSIds.indexOf(sId) != -1){
thisNode = thisModel.mapSpeciesLayouts[sId];
}
else if(compartmentSIds.indexOf(sId) != -1){
thisNode = thisModel.mapCompartmentLayouts[sId];
}
else if(reactionSIds.indexOf(sId) != -1){
thisNode = thisModel.mapReactionLayouts[sId];
}
else{
__logger.error('apply drag failed : Node with sId '+sId +" does not exists in model.")
return;
}
//proces this node.
thisNode.iHeight = dragNode.iHeight;
thisNode.iWidth = dragNode.iWidth;
thisNode.position = dragNode.position;
});
}
/**
* updates the node key value to newval ( by applying required tranformations)
* @param {String} sId sId of the node to be updated.
* @param {String} sKey key to be updated in this node.
* @param {Object|String|Number} newVal new value to be updated.
* @return {Species|compartment|Reaction} updated node.
* @throws {customErrors.ValidationError}
*/
SBMLModel.prototype.setNodeValueByKey = function(sId,sKey,newVal){
if(!sId || !sKey){
throw new customErrors.ValidationError('Missing cumpolsary parameter')
}
var thisNode = this.getNodeObjectBySId(sId);
if(!thisNode){
throw new customErrors.ValidationError(eskinMessages.validation_sId_does_not_exist);
}
if(!thisNode.hasOwnProperty(sKey))
throw new customErrors.ValidationError('Property : '+sKey + ' does not exist.');
//handle some special cases if any based on entityType
switch (thisNode.getEntityType()) {
case 'Edge':
switch (sKey) {
case 'rStoichiometry':
thisNode.setStoichiometry(parseFloat(newVal));
break;
case 'bConstant':
//TODO: this setter must be passed only booleans.
thisNode.setConstant(newVal);
break;
case 'sModifierType':
thisNode.setModifierType(newVal);
break;
default:
}
break;
default:
}
switch (sKey) {
case 'position':
newVal.iX = parseFloat(newVal.iX)
newVal.iY = parseFloat(newVal.iY)
modelValidator.validate_position(newVal);//this throws error if invalid position.
thisNode[sKey] = newVal;
break;
case 'iHeight':
//TODO: maintain aspect ration.
newVal = parseFloat(newVal);
thisNode[sKey] = newVal;
break;
case 'iWidth':
//TODO: maintain aspect ration.
newVal = parseFloat(newVal);
thisNode[sKey] = newVal;
break;
default:
thisNode[sKey] = newVal;
}
}
//inherits from Base
/**
* Constructs the Species object
* @constructor
* @param options
* @returns {Species}
*/
function Species(options){
//call to super constructor
Base.call(this,options);
//add species specific properties
/*
* bBoundaryCondition: false
bIsConstant: false
color: {iRed: 0, iGreen: 0, iBlue: 168, iAlfa: 255}
dInitialQuantity: 0
iHeight: 40 -->base
iWidth: 40 -->base
position: {iX: 557, iY: 126} -->base
sHasOnlySubtanceUnit: false
sId: "S_1" -->base
sModification: ""
sName: "e-" -->base
sParentCompartment: "C_1" -->base
sParentComplex: ""
sQuantityType: "Concentration"
sSubstanceUnit: ""
this.sNote = ""
sType: "SIMPLECHEMICAL"
*/
this.bBoundaryCondition = options.bBoundaryCondition || false;
this.bIsConstant = options.bIsConstant || false;
this.color = options.color || {iRed: 0, iGreen: 0, iBlue: 168, iAlfa: 255};
this.dInitialQuantity = options.dInitialQuantity || 0;
this.sHasOnlySubtanceUnit = options.sHasOnlySubtanceUnit || false;
this.sModification = options.sModification || "";
this.sParentComplex = options.sParentComplex || null;
this.sQuantityType = options.sQuantityType || "Concentration";
this.sSubstanceUnit = options.sSubstanceUnit || "mole (Pathway Map Default)";
//TODO : verify this assumption
//also should this be alerted to user?
this.sType = options.sType || "Gene";
this.sSpeciesGroup = options.sSpeciesGroup || "Group 2";
this.sNote = options.sNote || "";
// if Group 2 [{id:String,title:string,journal:string,volume:String,pages:String,dop:string,author:string}]
this.sPubMedReferences = options.sPubMedReferences || (this.sSpeciesGroup ==='Group 1'? "":[]);
/** hidden properties **/
//species will function as container only if it is of type COMPLEX
if( this.sType === "Complex"){
var children = []; /** not a SBML property **/
this.getAllChildren = function(){return children;}
this.addChild = function(sId){
//TODO add validation here to check that added is not compartment
return children.indexOf(sId) === -1 ?children.push(sId):-1;
}
/**
* removes child from a child list return array of deleted
*/
this.removeChild = function(sId){
if(children.indexOf(sId) !== -1)
return children.splice(children.indexOf(sId), 1);
return null;
}
}
/**
* Private variable stores overlayStatus of this Species
* @type {String} valid values = UR,DR,UA,ND
*/
var overlayStatus = '';
/**
* returns or sets the overlayStatus of this species
* @return {[type]} [description]
*/
this.overlayStatus = function(_overlayStatus){
overlayStatus = _overlayStatus || overlayStatus;
return overlayStatus;
}
//TODO: add edges to the speceis
var edges = []
/**
* store the edge refrence of edge this species is part of
* @param {Edge} edge edge object of which this species is part of
* @return {} adds this edge to the edge list
*/
this.addEdge = function(edge){
if(!edge || edge.constructor.name !=='Edge')
throw new Error('Species addEdge failed. Invalid edge object added');
//var allEdgeSIds = edges.map(function(_edge){return _edge.sId});
//if(allEdgeSIds.indexOf(edge.sId) == -1){
edges.push(edge);
//}
//else{
//edge allredy exists ignore this for now
//console.warn('Edge ' + edge.sId + " Edge allready exists");
//}
}
/**
* remove edge from this species based on the edge sId
* @param {Edge} sId edge id to be removed
* @return {Edge} removed edge or undefined if not found
*/
this.removeEdge = function(edge){
var allEdgeSIds = edges.map(function(_edge){return _edge.sId});
var spliced;
if(allEdgeSIds.indexOf(edge.sId) !== -1){
spliced = edges.splice(allEdgeSIds.indexOf(edge.sId),1);
}
return spliced;
}
/**
* returns all the edges this species is part of.
* @return {[Edge]} all the edges of this species
*/
this.getAllEdges = function(){
return edges;
}
}
//setup inheritance ( prototype chain )
Species.prototype = Object.create(Base.prototype);
Species.prototype.constructor = Species; // Reset the constructor from Base to Species
/**
* Scomos Logger : Scomos Logger Module
* Maintains Various Logs,alerts errors etc.
* Logger will maintain logs and expose API's to access them systematically
*
* Logger supports six levels of logging: TRACE < DEBUG < INFO < WARN < ERROR < FATAL
*
* library will accept the external logger object which have above mentioned methods
* in case external logger is not passed library will be use console.log ( Wont have FATAL)
**/
/** default logger **/
function Logger(){
var __logger = {};
var logger = console;
//setter to attach external logger
__logger.setLogger = function(__logger){
logger = __logger;
}
//add method wrappers to access log method of console or passed logger based on settings
/**
* Method : trace
* @param {String | object} message
* @returns logs the stack trace to appropriate logger
*/
__logger.trace = function trace(message){
if(logger.trace.constructor === Function)
logger.trace(message);
else
console.trace(message);
}
/**
* Method : info
* @param {String | object} message
* @returns logs the stack trace to appropriate logger
*/
__logger.info = function trace(message){
if(logger.info.constructor === Function)
logger.info(message);
else
console.info(message);
}
/**
* Method : debug
* @param {String | object} message
* @returns logs the stack trace to appropriate logger
*/
__logger.debug = function debug(message){
if(logger.debug.constructor === Function)
logger.debug(message);
else
console.log(message);
}
/**
* Method : warn
* @param {String | object} message
* @returns logs the stack trace to appropriate logger
*/
__logger.warn = function warn(message){
if(logger.warn.constructor === Function)
logger.warn(message);
else
console.warn(message);
}
/**
* Method : error
* @param {String | object} message
* @returns logs the stack trace to appropriate logger
*/
__logger.error = function error(message){
if(logger.error.constructor === Function)
logger.error(message);
else
console.error(message);
}
/**
* Method : fatal
* @param {String | object} message
* @returns logs the stack trace to appropriate logger
*/
__logger.fatal = function fatal(message){
if(logger.fatal.constructor === Function)
logger.fatal(message);
else
//since console logger have no FATAL method
console.error("FATAL: " + JSON.stringify(message));
}
return __logger;
};
/** expose logger object (console logger as default) **/
var __logger = d3scomos.Logger = Logger(console);
/**
* various constants to be used with SBML object
* creation etc
*/
var SBMLConstants = {};
SBMLConstants.defaults = {
'SIMPLECHEMICAL' :{iHeight:40,iWidth:40},
'GENERICPROTEIN' :{iHeight:40,iWidth:80},
'GENE' :{iHeight:40,iWidth:80},
'RNA' :{iHeight:40,iWidth:80},
'RECEPTOR' :{iHeight:40,iWidth:60},
'PHENOTYPE' :{iHeight:40,iWidth:80},
'PERTURBINGAGENT' :{iHeight:40,iWidth:80},
'SOURCEORSINK' :{iHeight:40,iWidth:40},
'LIGAND' :{iHeight:40,iWidth:40},
'TRANSCRIPTIONFACTOR' :{iHeight:40,iWidth:80},
'ENZYME' :{iHeight:40,iWidth:80},
'COMPLEX' :{iHeight:160,iWidth:130},
'RECTANGULAR' :{iHeight:80,iWidth:160},
'CIRCULAR' :{iHeight:80,iWidth:160},
//'REACTION' :{iHeight:20,iWidth:20},
'GENERAL' :{iHeight:20,iWidth:20},
'TRANSPORT' :{iHeight:20,iWidth:20},
'TRANSCRIPTION' :{iHeight:20,iWidth:20},
'TRANSLATION' :{iHeight:20,iWidth:20},
'COMPLEXFORMATION' :{iHeight:20,iWidth:20},
'COVALENTMODIFICATION' :{iHeight:20,iWidth:20}
}
SBMLConstants.colorConstants = {
'GENERAL' :'rgb(0,0,0)',
'TRANSPORT' :'rgb(120,51,47)',
'TRANSCRIPTION' :'rgb(235,78,227)',
'TRANSLATION' :'rgb(70,116,163)',
'COMPLEX FORMATION' :'rgb(19,170,214)',
'COVALENT MODIFICATION' :'rgb(254,148,6)',
}
SBMLConstants.objectDefaults = {
'edgeColor':{iRed: 0, iGreen: 0, iBlue: 0, iAlfa: 255}//equates to black color
}
/**
* Various constants regarding the keystore functionalities
*/
var keyStoreConstants = {};
keyStoreConstants.speciesPrefix = 'S';
keyStoreConstants.compartmentPrefix = 'C';
keyStoreConstants.reactionPrefix = 'R';
keyStoreConstants.keySeperator = '_';
// all resizer constants shall go here
//TODO : constants are private. Should they be made public?
var resizerConstants = {};
resizerConstants.handleHeight = 7;
resizerConstants.handleWidth = 7;
resizerConstants.minHeight = 14; // height of resized object shall not be less that this
//this tells what type of resizer for what type of node
//entries can be used to also enable disable the resizers
resizerConstants.typeAssociations = {'fourPoint' : ['speceis-node'],
'eightPoint' : ['compartment']
}
/** various constants for use within the custom library **/
/**
* shape constants : JSON defines various shape drawing/ behavior specific constants
*/
var shapeConstants = d3scomos.shapeConstants = {};
// constants to be used in the custom symbol drawing
shapeConstants.GENERIC_PROTIEN_RECT_ROUNDNESS_FACTOR = 0.2;
shapeConstants.SPECIES_SHAPE_OFFSET = 0.2;
// constants for gene overlay gradient
shapeConstants.gradient = {}
shapeConstants.gradient.species = {firstFill:"rgb(255,255,255)",
secondFill:'rgb(51, 33, 161)',
};
shapeConstants.gradient.GEOverlay ={
secondFill:'rgb(51, 33, 161)',
disabledFill:'rgb(229, 229, 229)',
}
/**
* creates arrayUtil : set array data manip functions
*/
var arrayUtil = d3scomos.arrayUtil = {};
/**
* function objectToArray : converts keyed json object to unkeyd data array
*/
arrayUtil.objectToArray =
function(data){
var arrayOfObj = [];
for(var key in data){
arrayOfObj.push(data[key])
}
return arrayOfObj;
};
/**
* returns index of an object in array
* @param {Array} arr array of objects
* @param {Object} needle object to be searched in array
* @returns {Number} return index of object if found ( 0 based) else -1
*/
arrayUtil.getIndexOfObject = function getIndexOfObject(arr,needle)
{
var foundAt = -1;
if(arr && objectHelper.isArray(arr)){
if(needle){
//TODO forEach cannot broken so may be implement this with for loop instead
arr.forEach(function(obj,index){
if(JSON.stringify(needle) === JSON.stringify(obj))
{
foundAt = index;
}
});
}
}
return foundAt;//not found
}
/**
* removes (splice) the array element(object) if exists
* @param {Array} arr array of objects
* @param {Object} needle object to be searched in array
* @returns {Number} returns array of deleted elements
*/
arrayUtil.removeElement = function removeElement(arr,needle){
var deleted = [];
var pos = arrayUtil.getIndexOfObject(arr, needle);
if(pos!== -1)
deleted = arr.splice(pos, 1)
return deleted;
}
var modelHelper = d3scomos.modelHelper = {};
/**
* Model Helper : This helper will contain re-usable codes required while drawing
* various graph constructs ( generally re factored code form scomosGraph.js will go here
* @param reactionList {object} d3 selection as input
* @param speciesNodes {object} d3 selection as input
* @return array of links
**/
modelHelper.getEdgeList = function getEdgeList(reactionList,speciesNodes){
var links = [];
if(!reactionList || !speciesNodes)
return links;
reactionList.forEach(function(reaction){
var thisReaction = reaction;
var _color = "rgb("+thisReaction.color.iRed+","+thisReaction.color.iGreen+","+thisReaction.color.iBlue+")";
//assume this node as source node
// find product nodes and add them as targets
//mapProducts: {Species_2: {bConstant: true, rStoichiometry: 1, sSpeciesRole: "Product", sModifierType: ""}}
for(var sId in thisReaction.mapProducts){
var thisMap = thisReaction.mapProducts;
var _targetNode = speciesNodes.filter(function(s){
return s.sId === sId;
})[0];
var thisEdge = thisMap[sId];
//add species name to the map species reference ( property explorer needs this)
thisEdge.sName = _targetNode.sName;
var _role = thisEdge['sSpeciesRole'];
var _stoichiometry = thisEdge['rStoichiometry'];
var _constant = thisEdge['bConstant'];
if(_targetNode){
links.push({
sId : thisReaction.sId+':'+_targetNode.sId,
source: thisReaction,
target: _targetNode,
role: _role,
color: _color,
stoichiometry:_stoichiometry,
constant:_constant,
updateEdge:function(obj){
if(obj.hasOwnProperty("stoichiometry")){
thisEdge['rStoichiometry'] = obj["stoichiometry"];
}
if(obj.hasOwnProperty("constant")){
thisEdge['bConstant'] = obj["constant"];
}
}
});
}
}
//assume this node as target
//find reactant nodes add them as source
//mapReactants: {S_3: {bConstant: false, rStoichiometry: 1, sSpeciesRole: "Reactant", sModifierType: ""}}
for(var sId in thisReaction.mapReactants)
{
var thisMap = thisReaction.mapReactants;
var _sourceNode = speciesNodes.filter(function(s){
return s.sId === sId;
})[0];
var thisEdge = thisMap[sId];
//add species name to the map species reference ( property explorer needs this)
thisEdge.sName = _sourceNode.sName;
var _role = thisEdge['sSpeciesRole'];
var _stoichiometry = thisEdge['rStoichiometry'];
var _constant = thisEdge['bConstant'];
var isReversible=false; //is this edge part of reversible
if(thisReaction.bIsReversible){
isReversible:true;
}
if(_sourceNode){
links.push({
sId : _sourceNode.sId+'-'+thisReaction.sId,
//Intentionally swapped source and target of this type of link, so as to display the marker near source
source: thisReaction,
target: _sourceNode,
role: _role,
color: _color,
stoichiometry:_stoichiometry,
constant:_constant,
reversible:isReversible,
updateEdge:function(obj){
if(obj.hasOwnProperty("stoichiometry")){
thisEdge['rStoichiometry'] = obj["stoichiometry"];
}
if(obj.hasOwnProperty("constant")){
thisEdge['bConstant'] = obj["constant"];
}
}
});
}
}
//assume this node as target
//find modifier nodes add them as source
//mapModifiers: {S_17: {bConstant: false, rStoichiometry: -1, sSpeciesRole: "Modifier", sModifierType: "Inhibitor"},…}
for(var sId in thisReaction.mapModifiers)
{
var thisMap = thisReaction.mapModifiers;
var _sourceNode = speciesNodes.filter(function(s){
return s.sId === sId;
})[0];
var thisEdge = thisMap[sId];
var _role = thisEdge['sSpeciesRole'];
//add species name to the map species reference ( property explorer needs this)
thisEdge.sName = _sourceNode.sName;
//var _stoichiometry = thisEdge['rStoichiometry'];
//var _constant = thisEdge['bConstant'];
var _modifierType = thisEdge['sModifierType'];
if(_sourceNode){
links.push({
sId : _sourceNode.sId+'-'+thisReaction.sId,
source: _sourceNode,
target: thisReaction,
role: _role,
color: _color,
modifierType:_modifierType
});
}
}
//console.log('** reaction node '+reaction);
});
return links;
}
/**
* @param speciesNode {object} d3 selection as input
* @return array of modifiers
**/
modelHelper.getModifierListOfNode = function getEdgeList(speciesNode){
var _modifiers = [];
var _modifiersOfCurrentSpecies = speciesNode.sModification.split("-");
var index = 0;
for(var modifier in _modifiersOfCurrentSpecies){
if(_modifiersOfCurrentSpecies[modifier] != ""){
_modifiers.push({
//sId:speciesNode.sId+'covalent_'+pos,
parentSpecies : speciesNode,
modificationType : _modifiersOfCurrentSpecies[modifier],
pos : index,
getEntityType: function(){return 'Modification';},
changeModificationType:function(newVal){
var splitStr = this.parentSpecies.sModification.split("-");
if(!newVal || newVal === "")
splitStr.splice(this.pos,1);
else
splitStr[this.pos] = newVal;
if(splitStr.length == 0) return this.parentSpecies.sModification = "";//all covalent nodes deleted
this.parentSpecies.sModification = splitStr.reduce(function(previousValue, currentValue) {
return previousValue + '-' + (currentValue?currentValue:"");
});
}
});
}
index = index + 1;
}
return _modifiers;
}
/**
* marks the passed reaction and its edges as selected
* @param {object} d3 selection as input
* @return marks this node as selected and if valid reaction node selects all its edges
*/
modelHelper.selectNode = function selectNode(node){
node.classed('selected',true);
if(node.classed("reaction-node"))
{
//links follow the state of reaction node
var thisReaction = node;
d3.selectAll('.link').filter(function(thisLink){
var _source = thisLink.source;
var _target = thisLink.target;
var thisID = thisReaction.datum().sId;
return _source.sId === thisID || _target.sId === thisID;
}).classed('selected',thisReaction.classed('selected'));
}
}
modelHelper.selectNodesByData = function(toBeselected,options){
//clear selection if any.
d3.selectAll('.selected').classed('selected',false);
var allCompartmentNodes = d3.selectAll('.compartments');
if(toBeselected.hasOwnProperty('compartments')){
toBeselected.compartments.forEach(function(compartment){
allCompartmentNodes.filter(function(d){return d.sId === compartment.sId})
.each(function(){
modelHelper.triggerClickOnNode(d3.select(this),true)
})
});
}
var allSpeciesNodes = d3.selectAll('.species-node');
if(toBeselected.hasOwnProperty('species')){
toBeselected.species.
forEach(function(species){
allSpeciesNodes.filter(function(d){return d.sId === species.sId})
.each(function(){
modelHelper.triggerClickOnNode(d3.select(this),true)
})
});
}
var allReactionNodes = d3.selectAll('.reaction-node');
if(toBeselected.hasOwnProperty('reactions')){
toBeselected.reactions.
forEach(function(reaction){
allReactionNodes.filter(function(d){return d.sId === reaction.sId})
.each(function(){
modelHelper.triggerClickOnNode(d3.select(this),true)
})
});
}
var allEdgeNodes = d3.selectAll('.link');
if(toBeselected.hasOwnProperty('edges')){
toBeselected.edges
forEach(function(edge){
allEdgeNodes.filter(function(d){return d.sId === edge.sId})
.each(function(){
modelHelper.triggerClickOnNode(d3.select(this),true)
})
});
}
}
/**
* updates/redraws/transform node to its correct poistion
* @return {[type]} [description]
*/
modelHelper.updateNodeView = function(node){
console.warn('classed for resi '+node.attr('class'));
if(node.classed('species-node')){
node.select('path')
.attr('d',function(d){
return d3scomos.getSymbol(d.sType,d);
})
//.attr('class', 'species-path')
//.attr('fill',function(d){ if(d.sType.toUpperCase() === 'COMPLEX') return 'url(#complexFill)'; return 'url(#speciesLinear)';});
//add text
node.select('text')
//.attr('text-anchor','middle')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return d.iWidth/2;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
//.attr('class', 'text-node');
//transform these nodes there right posistions
node.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
}else if(node.classed('compartment')){
console.warn('resizing compartment_node');
node.select('.compartment-path')
.attr('d',function(d){
if(d.sType == "RECTANGULAR"){
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}else if(d.sType == "CIRCULAR"){
return shapeUtil.getEllipseWithTickness(d.iHeight, d.iWidth,10);
}else{
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}
})
.attr('style',function(d){
//dont show default compartment
if(d.sId === 'default') return;
return 'fill:'+'rgb('+d.color.iRed+','+d.color.iGreen+','+d.color.iBlue+')';
});
// add text-node
node.select('text-node')
//.attr('text-anchor','middle')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return 0;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName});
//.attr('class', 'text-node');
//move compartment node to its corrrection position
node.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
}
}
/**
* maps event cordinates to viewPort co-ordinates
* @param {String} rootElem fully qualified div selector
* @param {D3 mouse event} event d3 mouse event whose co-ords are to be transfored
* @return {{iX:Number,iY:Number}} view port specific co-ordinates
*/
modelHelper.getTransformedCordinates = function(rootElem,event){
// fetch actual co ordinates using the CTM transform
var root = d3.select(rootElem).select('#rootG').node();
if(d3.select(rootElem).node().tagName === 'svg'){
var svg = d3.select(rootElem).node();
}
else {
var svg = d3.select(rootElem).select('svg').node();
}
var uupos = svg.createSVGPoint();
var evt = event;
uupos.x = evt.clientX;
uupos.y = evt.clientY;
var ctm = root.getScreenCTM();
var iCtm = ctm.inverse();
uupos = uupos.matrixTransform(iCtm)
var gTransformMatrix = root.transform.baseVal.consolidate();
uupos.matrixTransform(gTransformMatrix.matrix.inverse());
return {iX:uupos.x,iY:uupos.y};
}
/**
* Optiosn required to construct object
* @param {String} objectType object type to be constructed
* @param {Object} options default required to init SBML object
* @return {SBML Object} retursn one of various SBML object supported
*/
modelHelper.getSBMLObject = function(objectType,options){
switch (objectType) {
case 'SPECIES':
break;
case 'COMPARTMENT':
break;
default:
}
}
/**
* trigger mouse click on provided node.
* @param {D3 selector} node D3 selector poinging to node
* @return {}
*/
modelHelper.triggerClickOnNode = function(node,isCtrlPressed){
var domNode = node.node();
// var e = document.createEvent('UIEvents');
// e.initUIEvent("click", true, true, window, 1);
var mouseClick = new MouseEvent('click',{ctrlKey:isCtrlPressed});
//construnction node disable accordingly
//reset the tools if DISCONTINUOS construnction mode
domNode.dispatchEvent(mouseClick);
}
/**
* returns the pastable selection by applying the transforms and genrating new layout and new Sids
* @param {{speceis:[Species],reactions:[Reactions]}} toBePasted selection that is to be pasted.
* @param {KeyStore} keyStore instace of active keyStore.
* @return {{speceis:[Species],reactions:[Reactions]}} [description]
* @throws {error} if conversion failed due to some reason.
*/
modelHelper.getPastableSelection = function (toBePasted,keyStore,pasteAt){
try{
/**
* ID map to maintain mapping of newly generated ids to old ids
* @type {{sId:{oldSid:Sid,newSId:newSid,isProcessed:Boolean}}}
*/
var sIdMap = {};
toBePasted.species.forEach(function(species){
//generate new key store with old one
sIdMap[species.sId] = {oldSid:species.sId,newSid:keyStore.getNextSpecies(),isProcessed:false}
});
toBePasted.reactions.forEach(function(reaction){
//generate new key store with old one
sIdMap[reaction.sId] = {oldSid:reaction.sId,newSid:keyStore.getNextReaction(),isProcessed:false}
});
//apply these sid to collection
toBePasted.species.forEach(function(species){
var oldSid = species.sId;
species.sId = sIdMap[oldSid].newSid;//update this Speceis
if(species.sParentComplex){
if(sIdMap[species.sParentComplex]){
species.sParentComplex = sIdMap[species.sParentComplex].newSid;
}
}
});
toBePasted.reactions.forEach(function(reaction){
reaction.sId = sIdMap[reaction.sId].newSid;
//update all submaps of this reaction
var newMapProducts = {};
d3.keys(reaction.mapProducts).forEach(function(productSId){
newMapProducts[sIdMap[productSId].newSid] = reaction.mapProducts[productSId];
})
reaction.mapProducts = newMapProducts;
var newMapReactants = {};
d3.keys(reaction.mapReactants).forEach(function(reactantSId){
newMapReactants[sIdMap[reactantSId].newSid] = reaction.mapReactants[reactantSId];
})
reaction.mapReactants = newMapReactants;
var newMapModifiers = {};
d3.keys(reaction.mapModifiers).forEach(function(modifierSId){
newMapModifiers[sIdMap[modifierSId].newSid] = reaction.mapModifiers[modifierSId];
})
reaction.mapModifiers = newMapModifiers;
});
//apply tranformations
//process all complexes first
if(!pasteAt){
pasteAt = {iX:10,iY:10};
}
var tX = pasteAt.iX || 10;
var tY = pasteAt.iY || 10;
var xSpace = 10;
toBePasted.species.forEach(function(species){
if(species.sType.toUpperCase() === 'COMPLEX'){
var transVector = {x: (tX - species.position.iX), y: (tY - species.position.iY)};
species.position = {iX:tX,iY : tY};
species.isProcessed = true;
toBePasted.species.forEach(function(childSpecies){
if(!childSpecies.isProcessed && childSpecies.sParentComplex === species.sId){
console.warn('tranforming the complex child : '+childSpecies.sId);
console.warn(transVector);
console.warn(childSpecies.position);
var newPos = {iX : childSpecies.position.iX + transVector.x,
iY : childSpecies.position.iY + transVector.y}
// childSpecies.position.iX += transVector.x;
// childSpecies.position.iY += transVector.y;
childSpecies.position = newPos;
console.warn(childSpecies.position);
childSpecies.isProcessed = true;
}
});
tX += species.iWidth + xSpace;
}
});
//process species that are not processed yet
toBePasted.species.forEach(function(species){
if(!species.isProcessed){
console.warn(species.sId);
species.position = {iX:tX,iY : tY};
species.isProcessed = true;
tX += species.iWidth + xSpace;
}
});
//process reactions
toBePasted.reactions.forEach(function(reaction){
//get first product
var firstProductSId = d3.keys(reaction.mapProducts)[0];
//get first reaction
var firstReactantSId = d3.keys(reaction.mapReactants)[0];
if(firstProductSId && firstReactantSId){
var firstProduct = toBePasted.species.filter(function(elem){return elem.sId === firstProductSId})[0];
var firstReaction = toBePasted.species.filter(function(elem){return elem.sId === firstReactantSId})[0];
var newPos = shapeUtil.getMidPoint(firstProduct,firstReaction);
reaction.position = newPos;
}
else if(firstReactantSId){
//get the species
//move the shape to the 100px right of vertical center of the shape.
var firstReaction = toBePasted.species.filter(function(elem){return elem.sId === firstReactantSId})[0];
var newPos = {iX:firstReaction.position.iX + firstReaction.iWidth + 100,
iY:firstReaction.position.iY + (firstReaction.iHeight/2) }
reaction.position = newPos;
}
else if(firstProductSId){
//get the species
//move the shape to the 100px right of vertical center of the shape.
var firstProduct = toBePasted.species.filter(function(elem){return elem.sId === firstProductSId})[0];
var newPos = {iX : (firstProduct.position.iX + firstProduct.iWidth + 100),
iY : (firstProduct.position.iY + (firstProduct.iHeight/2)) }
reaction.position = newPos;
}
reaction.isProcessed = true;
});
return toBePasted;
}
catch(err){
__logger.error('modelHelper-gePastableSelection failed : '+err.message)
}
}
/**
* handles the externally triggered node selection.
* @param {d3 selector} node non empty node selector.
* @param {instanceOf scomosSelections} selection active instanceOf scomosSelections.
* @param {Boolean} ctrlPressed is ctrl pressed.
* @return {} Selects or deselects one or more nodes based on the parameters passed.
*/
modelHelper.handleExternalNodeSelection = function(node,selection,ctrlPressed){
if(!ctrlPressed){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
modelHelper.selectNode(node);
//clean up the selection
selection.addNode(node);
if(!node.classed('reaction-node')) resizer.addResizer(node);
}
else{
//toggle speciesSelection
resizer.clearResizer();
node.classed('selected',!node.classed('selected'));
//add to selection if it is selected
if(node.classed('selected')){
modelHelper.selectNode(node);
selection.addNode(node);
}
else
selection.removeNode(node);
}
}
/**
* Contains various helper methods to test convert etc. javascript object
*/
var objectHelper = d3scomos.objectHelper ={};
/**
* tests if passed is really an object
* @param obj obj to be tested for being an object ( sounds weird) :;
*/
objectHelper.isObject = function isObject(obj){
return obj && (typeof obj === "object");
}
/**
* tests if passed is really an array
* @param {Array} array to be tested for being an array
* @returns
*/
objectHelper.isArray = function isObject(array){
//return array && (typeof array instanceof Array);
return array.constructor === Array
}
/** check if passed is really the string
* @param {string} obj to be tested for being string
*/
objectHelper.isString = function isString(obj){
return typeof obj === 'string';
}
/**
* Checlk if passed is the function
* @param {function} function to be tested for being function
* @returns {Boolean} weather passed is a funcion or not
**/
objectHelper.isFunction = function isFunction(functionToCheck) {
var getType = {};
return functionToCheck && getType.toString.call(functionToCheck) === '[object Function]';
}
/**
* returns hash for the string variable. Use apply or call pattern when calculating hash
* @return {Number} 32 bit hash of this object
*/
objectHelper.getStringHash = function() {
var hash = 0, i, chr, len;
if (this.length === 0) return hash;
for (i = 0, len = this.length; i < len; i++) {
chr = this.charCodeAt(i);
hash = ((hash << 5) - hash) + chr;
hash |= 0; // Convert to 32bit integer
}
return hash;
};
/**
* test if string contains only alphabets
* @param {String} needle string to be tested
* @param {Boolean} uCase default true means only upper case allowed else only lower case allowed
* @param {boolean} ignoreCase if passed first param will be ignored
* @return {boolean} wheather
*/
objectHelper.isAlphabetsOnly = function(needle,uCase,ignoreCase){
if(typeof uCase === 'undefined') uCase = true; //default to upper
if(typeof ignoreCase === 'undefined') ignoreCase = false;
var regex;
if(uCase == true)
regex = /^[A-Z]+$/ ;
else
regex = /^[a-z]+$/;
if(ignoreCase == true)
regex = /^[A-Z a-z]+$/
return regex.test(needle);
};
/**
* return if passed needle in valid integer
* @param {String|Number} needle needle to be tested for integer
* @return {[type]} returns weather needle is integer or not
* 00001 is valid integer
*/
objectHelper.isInteger = function(needle){
return /^[0-9]+$/.test(needle);
}
/**
* Compare two string arrays. IMPORTANT : make sure arrays are valid JSON arrays i.e. no loops, methods etc.
* @param {[String]} target string array to be compared
* @return {Boolean} Boolean Stating equality. if invalid data is provided it will still return boolean i.e. false;
*/
//TODO: should it be set instead?
objectHelper.compareStringArray = function(target){
if(!objectHelper.isArray(this) || !objectHelper.isArray(target))
return false;
var _source = this.map(function(d){return d});
var _target = target.map(function(d){return d});
//sort both arrays
_source.sort();
_target.sort();
return JSON.stringify(_source) === JSON.stringify(_target);
}
/**
* checks if the array has particular node. Assumes the array to have only sbmlNodes.
* @param {String} sId needle to be searched.
* @return {boolean} weather node is in array or not.
*/
objectHelper.isNodeInArray = function(sourceArray,sId){
if(!sourceArray || !sourceArray.length || sourceArray.length == 0 || !sId) return false;
for(var nodeIndex in sourceArray){
if(sourceArray[nodeIndex].sId === sId) return true
}
return false;
}
/**
* deep copies the node object.
* @param {[type]} node [description]
* @return {[type]} [description]
*/
objectHelper.deepCopyNodeObject = function(node){
try{
return JSON.parse(JSON.stringify(node));
}
catch(parseErr){
__logger.error('Node deep copy failed : ' + parseErr.message)
return null;
}
}
/**
* deep copies the scomos selection object returned by various selection methods.
* @param {{'compartments':[Compartment],'species':[Species],'reactions':[Reaction],'edges':[Edge]}} toBeDeepCopied object to be deep copied.
* @return {{'compartments':[Compartment],'species':[Species],'reactions':[Reaction],'edges':[Edge]}} [description]
*/
objectHelper.deepCopyScomosSelections = function(toBeDeepCopied){
}
/**
* Shape helper : an Utility module with reusable shapes and helper methods
*/
var shapeUtil = d3scomos.shapeUtil = {};
/** draws the ellipse/circle
* @param {Number} height of ellipse
* @param {Number} width of ellipse
* @param {Number} topLeftY y of top-left corner of bounding rectangle of ellipse
* @returns {String} a svg path describing ellipse assuming (topLeftX, topLeftY) to be the starting point of bounding rectangle
**/
shapeUtil .getEllipse = function(height, width, topLeftX, topLeftY){
//init defaults
topLeftX = topLeftX || 0;
topLeftY = topLeftY || 0;
// var cx = topLeftX + width/2;
// var cy = topLeftY + height/2;
var rx = width/2;
var ry = height/2;
var topMiddle = {x: topLeftX + width/2, y: topLeftY},
bottomMiddle = {x: topLeftX + width/2, y: topLeftY + height};
return "M" + topMiddle.x + " " +topMiddle.y
+ "A " + rx + " "+ ry + " 0 0 0 "+bottomMiddle.x +" "+bottomMiddle.y
+ "A " + rx + " "+ ry + " 0 0 0 "+topMiddle.x +" "+topMiddle.y;
}
/** draws the ellipse/circle
* @param {Number} cx center x val
* @param {Number} cy center y val
* @param {Number} rx r radius
* @param {Number} ry y radius
* @returns {String} a svg path describing ellipse assuming (0,0) to be the starting point of bounding rectangle
**/
//shapeUtil .getEllipse = function(rx,ry,cx,cy){
// var topMiddle = {x:cx , y: 0},
// bottomMiddle = {x: cx, y: 2 * cy };
// return "M" + topMiddle.x + " " +topMiddle.y
// + "A " + rx + " "+ ry + " 0 0 0 "+bottomMiddle.x +" "+bottomMiddle.y
// + "A " + rx + " "+ ry + " 0 0 0 "+topMiddle.x +" "+topMiddle.y
//}
/**
* draws rounded rectangle
* @param {Number} height of target rectangle
* @param {Number} width of target rectangle
* @param {Number} topLeftX optional startX coordinate
* @param {Number} topLeftY optional startY coordinate
* @returns {String} a svg path describing rounded rect
*/
shapeUtil .getRoundedRect = function(height,width,topLeftX,topLeftY) {
//init defaults
topLeftX = topLeftX || 0;
topLeftY = topLeftY || 0;
var radius = d3.min([height,width])*shapeConstants.GENERIC_PROTIEN_RECT_ROUNDNESS_FACTOR;
return rounded_rect(topLeftX,topLeftY,width,height,radius,1,1,1,1);
}
/**
* creates rounded_rect
* @param {Number} x start co -ord for rect
* @param {Number} y Start y co-ord for rect
* @param {Number} w width of rect
* @param {Number} h height of rect
* @param {Number} r radius of round rect.
* @param {optional } tl is top left rounded.
* @param {optional} tr is top right rounded.
* @param {optional} bl is bottom left rouned.
* @param {optional} br is bottom right rouned.
* @return {String} path that renders rouned rect.
*/
function rounded_rect(x, y, w, h, r, tl, tr, bl, br) {
var retval;
retval = "M" + (x + r) + "," + y;
retval += "h" + (w - 2*r);
if (tr) { retval += "a" + r + "," + r + " 0 0 1 " + r + "," + r; }
else { retval += "h" + r; retval += "v" + r; }
retval += "v" + (h - 2*r);
if (br) { retval += "a" + r + "," + r + " 0 0 1 " + -r + "," + r; }
else { retval += "v" + r; retval += "h" + -r; }
retval += "h" + (2*r - w);
if (bl) { retval += "a" + r + "," + r + " 0 0 1 " + -r + "," + -r; }
else { retval += "h" + -r; retval += "v" + -r; }
retval += "v" + (2*r - h);
if (tl) { retval += "a" + r + "," + r + " 0 0 1 " + r + "," + -r; }
else { retval += "v" + -r; retval += "h" + r; }
retval += "z";
return retval;
}
/**
* draws rounded rectangle with thickness
* @param {Number} height of target rectangle
* @param {Number} width of target rectangle
* @param {Number} thickness pixel value for shape thickness
* @returns {String} a svg path describing rounded rect
*/
shapeUtil .getRoundedRectWithTickness = function(height,width,thickness) {
var innerX = thickness;
var innerY = thickness;
var innerH = height-2*thickness;
var innerW = width-2*thickness;
return this.getRoundedRect(height, width)+" "+this.getRoundedRect(innerH, innerW, innerX, innerY);
}
/**
* draws ellipse with thickness
* @param {Number} height of target ellipse
* @param {Number} width of target ellipse
* @param {Number} thickness pixel value for shape thickness
* @returns {String} a svg path describing ellipse
*/
shapeUtil .getEllipseWithTickness = function(height,width,thickness) {
var innerX = thickness;
var innerY = thickness;
var innerH = height-2*thickness;
var innerW = width-2*thickness;
return this.getEllipse(height, width)+" "+this.getEllipse(innerH, innerW, innerX, innerY);
}
/**
*TODO: refactor
* this is the dummy implementation for demonstration purposes
* this does not seem right place for this code
*/
shapeUtil.resolveShape=function(shapeNo)
{
var TenSpeciesTypes = {
'SIMPLECHEMICAL' : 0,
'GENERICPROTEIN' : 1,
'GENE' : 2,
'RNA' : 3,
'RECEPTOR' : 4,
'PHENOTYPE' : 5,
'PERTURBINGAGENT' : 6,
'SOURCEORSINK' : 7,
'LIGAND' : 8,
'TRANSCRIPTIONFACTOR' : 9,
'ENZYME' : 10,
'COMPLEX' : 11,
'INVALIDSPECIESTYPE' : 12
};
var keys = [];
for(var k in TenSpeciesTypes) keys.push(k);
return keys[shapeNo];
}
/**
* generalization of hitTest to detect if one rectangle(shape) is inside the other
* checks if shapeTarget is inside the shapeSource
* @param {object} shapeSource standard scomos shape object as source container
* @param {object} shapeTarget standard scomos shape object to be tested
* @returns {Boolean} true if inside otherWise false
*/
shapeUtil.hitTest = function hitTest(shapeSource,shapeTarget){
//check if start of shape is inside the containder
if( (shapeSource.position.iX < shapeTarget.position.iX)
&& (shapeSource.position.iY < shapeTarget.position.iY)
&& ((shapeSource.position.iX + shapeSource.iWidth) > (shapeTarget.position.iX + shapeTarget.iWidth) )
&& ((shapeSource.position.iY + shapeSource.iHeight) > (shapeTarget.position.iY + shapeTarget.iHeight) )
){
return true
}
return false;
}
/**
* function to insert required reusable gradients to svg element
* //TODO find better way to reuse the gradient and def shapes
* currently not able to link svg file like we link css
*/
shapeUtil.initGradients = function( injectInto)
{
if(!injectInto)
return;
/** reference to new svg element to hold various reusable gradients **/
var defElem = d3.select(injectInto).select("svg").append("defs").attr('id', 'eskindefs');;
var disabledColor = shapeConstants.gradient.GEOverlay.disabledFill;
var colorConstants = SBMLConstants.colorConstants;
/**
* <linearGradient id="speciesLinear"
* x1="0%" x2="0%" y1="100%" y2="0%" spreadMethod="pad">
* <stop offset="50%" stop-opacity="1" style="stop-color: rgb(173, 216, 230);"></stop>
* <stop offset="100%" stop-opacity=".5" style="stop-color: rgb(255, 255, 255);"></stop>
* </linearGradient>
*/
var speciesFill = defElem.append("linearGradient").attr("id", "speciesLinear")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
speciesFill.append("stop").attr("offset", "-30%").attr("stop-opacity","1").style("stop-color", "rgb(51, 33, 161)");
speciesFill.append("stop").attr("offset", "100%").attr("stop-opacity","1").style("stop-color", "white");
var complexFill = defElem.append("linearGradient").attr("id", "complexFill")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
complexFill.append("stop").attr("offset", "0%").attr("stop-opacity","1").style("stop-color", "rgb(180, 170, 240)");
complexFill.append("stop").attr("offset", "100%").attr("stop-opacity","1").style("stop-color", "white");
//type : GENERAL
/*
GENERALREACTION: Object
iAlfa: 255 iBlue: 0 iGreen: 0 iRed: 0
*/
var reactionFill_general = defElem.append("linearGradient").attr("id", "reactionFill_general")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
reactionFill_general .append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", colorConstants["GENERAL"]);
reactionFill_general.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", "white");
//type : TRANSPORT
/*
TRANSPORT: Object iAlfa: 255 iBlue: 47 iGreen: 51 iRed: 120
*/
var reactionFill_transport = defElem.append("linearGradient").attr("id", "reactionFill_transport")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
reactionFill_transport.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", colorConstants["TRANSPORT"]);
reactionFill_transport.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", "white")
//type : TRANSCRIPTION
//
var reactionFill_transcription = defElem.append("linearGradient").attr("id", "reactionFill_transcription")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
reactionFill_transcription.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", colorConstants["TRANSCRIPTION"]);
reactionFill_transcription.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", "white")
//type : TRANSLATION
/*
TRANSLATION: Object
iAlfa: 255 iBlue: 163 iGreen: 116 iRed: 70
*/
var reactionFill_translation = defElem.append("linearGradient").attr("id", "reactionFill_translation")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
reactionFill_translation.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", colorConstants["TRANSLATION"]);
reactionFill_translation.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", "white");
//type : COMPLEX FORMATION
/*
COMPLEXFORMATION: iAlfa: 255 iBlue: 214 iGreen: 170 iRed: 19
*/
var reactionFill_complex = defElem.append("linearGradient").attr("id", "reactionFill_complex")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad")
reactionFill_complex.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", colorConstants["COMPLEX FORMATION"]);
reactionFill_complex.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", "white");
//type : COVALENT MODIFICATION
//TODO find color
var reactionFill_covalent = defElem.append("linearGradient").attr("id", "reactionFill_covalent")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
reactionFill_covalent.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", colorConstants["COVALENT MODIFICATION"]);
reactionFill_covalent.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", "white");
// type: DISABLED REACTION due to GEO filters state
var reactionFill_disabled = defElem.append("linearGradient").attr("id", "reactionFill_disabled")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
reactionFill_disabled.append("stop").attr("offset", "50%").attr("stop-opacity","1").attr("stop-color", shapeConstants.gradient.GEOverlay.disabledFill);
reactionFill_disabled.append("stop").attr("offset", "50%").attr("stop-opacity","1").attr("stop-color", "white");
var nodeFill_disabled = defElem.append("linearGradient").attr("id", "nodeFill_disabled")
.attr("x1", "0%").attr("x2", "0%").attr("y1", "100%").attr("y2", "0%")
.attr("spreadMethod","pad");
nodeFill_disabled.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", disabledColor);
nodeFill_disabled.append("stop").attr("offset", "50%").attr("stop-opacity","1").style("stop-color", disabledColor);
var filledArrowMarker = defElem.append("marker")
.attr("id", "filledArrow")
.attr("markerWidth", "12")
.attr("markerHeight", "12")
.attr("refX", "0")
.attr("refY", "6")
.attr("orient", "auto")
.attr('markerUnits','userSpaceOnUse')
.append("path")
.attr("d", "M0,0 L0,12 L12,6 L0,0")
.attr("style", "fill: #000000;");
//.classed('marker-all',true);
var hollowArrowMarker = defElem.append("marker")
.attr("id", "hollowArrow")
.attr("markerWidth", "12")
.attr("markerHeight", "12")
.attr("refX", "0")
.attr("refY", "6")
.attr("orient", "auto")
.attr('markerUnits','userSpaceOnUse')
.append("path")
.attr("d", "M0,0 L0,12 L12,6 L0,0")
.attr("style", "fill: #fff; stroke: #000000; stroke-width:2px;");
//.classed('marker-all',true);
var lineMarker = defElem.append("marker")
.attr("id", "Line")
.attr("markerWidth", "12")
.attr("markerHeight", "12")
.attr("refX", "0")
.attr("refY", "6")
.attr("orient", "auto")
.attr('markerUnits','userSpaceOnUse')
.append("polyline")
.attr("points", "0,-12 0,12")
.attr("style", "fill: #fff; stroke: #000000; stroke-width:5px;");
//.classed('marker-all',true);
// line arrow markers for disabledFill
var filledArrowMarker_disabled = defElem.append("marker")
.attr("id", "filledArrow_disabled")
.attr("markerWidth", "12")
.attr("markerHeight", "12")
.attr("refX", "0")
.attr("refY", "6")
.attr("orient", "auto")
.attr('markerUnits','userSpaceOnUse')
.append("path")
.attr("d", "M0,0 L0,12 L12,6 L0,0")
.attr("style", "fill:"+disabledColor+";");
//.classed('marker-all',true);
var hollowArrowMarker_disable = defElem.append("marker")
.attr("id", "hollowArrow_disable")
.attr("markerWidth", "12")
.attr("markerHeight", "12")
.attr("refX", "0")
.attr("refY", "6")
.attr("orient", "auto")
.attr('markerUnits','userSpaceOnUse')
.append("path")
.attr("d", "M0,0 L0,12 L12,6 L0,0")
.attr("style", "fill: " + disabledColor + "; stroke: "+disabledColor+"; stroke-width:2px;");
//.classed('marker-all',true);
var lineMarker_disable = defElem.append("marker")
.attr("id", "lineMarker_disable")
.attr("markerWidth", "12")
.attr("markerHeight", "12")
.attr("refX", "0")
.attr("refY", "6")
.attr("orient", "auto")
.attr('markerUnits','userSpaceOnUse')
.append("polyline")
.attr("points", "0,-12 0,12")
.attr("style", "fill: "+disabledColor+"; stroke: "+disabledColor+"; stroke-width:5px;");
//.classed('marker-all',true);
}
/**
* returns the fillClassName for reaction based on type
* @param {[type]} reactionType [description]
* @return {[type]} [description]
*/
shapeUtil.getReactionFill = function (reactionType){
reactionType = reactionType.toUpperCase() || "GENERAL";
var reactionFillTypes = {
"GENERAL" : "reactionFill_general",
"TRANSPORT" : "reactionFill_transport",
"TRANSCRIPTION" : "reactionFill_transcription",
"TRANSLATION" : "reactionFill_translation",
"COMPLEX FORMATION" : "reactionFill_complex",
"COVALENT MODIFICATION" : "reactionFill_covalent"
}
if(!reactionFillTypes[reactionType])
console.warn("reaction fill does not exists " +reactionType);
return 'url(#' + reactionFillTypes[reactionType] + ')';
}
/**
* function to get svg path coordinates corresponding to given svg line
* It accepts end points of a line, height, width of target nodes and role of the link in the reaction; and returns a string
* The returned string will contain coordinates of 3 points on the path
*/
shapeUtil.getPathCoordsForLine = function(sourceNode, targetNode, role){
if(sourceNode == undefined)
console.log("error");
//node.position gives coordinates of top-left corner of the bounding box;
//calculate coordinates of centre of bounding box
var sourceX = sourceNode.position.iX + (sourceNode.iWidth || 20 )/2;
var sourceY = sourceNode.position.iY + (sourceNode.iHeight || 20 )/2;
var targetX = targetNode.position.iX + (targetNode.iWidth || 20 )/2;
var targetY = targetNode.position.iY + (targetNode.iHeight || 20 )/2;
var sourceHeight = sourceNode.iHeight || 20;
var sourceWidth = sourceNode.iWidth || 20;
var targetHeight = targetNode.iHeight || 20;
var targetWidth = targetNode.iWidth || 20;
//Depending on the role of link, update the connection points at reactionNode--------------------------------------------
if(role == "product"){
//In this case, link is 'reaction->species'; connect it to bottom of reactionNode
sourceY = sourceY + sourceHeight/2;
}else if(role.substring(0,8) == "reactant"){
//In this case, link is 'species->reaction' [but represented as 'reaction->species' for sake of convenience];
//connect it to top of reactionNode
sourceY = sourceY - sourceHeight/2;
}else if(role.substring(0,8) == "modifier"){
//In this case, link is 'species->reaction'
//connect it to either left or right of reactionNode depending on position of species
if(sourceX < targetX){ //species on left; connect to left of reaction
targetX = targetX - targetWidth/2;
}else{ //species on right; connect to right of reaction
targetX = targetX + targetWidth/2;
}
}
//----------------------------------------------------------------------------------------------------------------------
var getPythagorianDistance = function(a, b){return Math.sqrt(Math.pow(a,2) + Math.pow(b,2));}
//calculate diagonal of target
var diagonalOfSourceNode = getPythagorianDistance(sourceHeight, sourceWidth);
var diagonalOfTargetNode = getPythagorianDistance(targetHeight, targetWidth);
//Calculate distance(from source) at which to have break-point---------------------------------------------------------
//find visible length of line
var lengthOfLine = getPythagorianDistance(Math.abs(sourceX-targetX), Math.abs(sourceY-targetY));
var visibleLengthOfLine = 0;
if(role.substring(0,8) == "modifier"){
visibleLengthOfLine = lengthOfLine - (diagonalOfSourceNode/2);
}else{
visibleLengthOfLine = lengthOfLine - (diagonalOfTargetNode/2);
}
var d1 = 0; //distance of marker from boondary of targetNode
var d2 = 0; //distance of marker from boondary of sourceNode
var d = 0; //distance of marker from connection point of sourceNode
if(visibleLengthOfLine > 0){ //if no overlap between sourceNode and targetNode
d1 = visibleLengthOfLine/6;
d2 = visibleLengthOfLine - d1;
} //else d2 = 0;
if(role.substring(0,8) == "modifier"){ //here, sourceNode overlaps some portion of link
d = d2 + (diagonalOfSourceNode/2);
}else{
d = d2;
}
//---------------------------------------------------------------------------------------------------------------------
//calculate coordinate of break-point
var xOfBreakPoint = sourceX + (d*(targetX-sourceX)/lengthOfLine);
var yOfBreakPoint = sourceY + (d*(targetY-sourceY)/lengthOfLine);
//construct and return string
return "M"+sourceX+","+sourceY+" L"+xOfBreakPoint+","+yOfBreakPoint+" L"+targetX+","+targetY;
}
/**
* creates the gradient with passed color values and ids if does not exist
* @param {String} color1 color1 of graient spans form top to middle
* @param {string} color2 color2 of graient spans form middle to bottom
* @param {string} gradientID gradient id for new gradient
* @return {String} returns the gradienID back
*/
shapeUtil.getGEOGradient = function(color1,color2,gradientID){
var defElem = d3.select('#eskindefs');
//remove this node if exists
defElem.select('#'+gradientID).remove();
// <linearGradient id="grad2" x1="0%" y1="0%" x2="0%" y2="100%">
// <stop offset="0%" style="stop-color:rgb(255,255,0);stop-opacity:1" />
// <stop offset="100%" style="stop-color:rgb(255,0,0);stop-opacity:1" />
// </linearGradient>
//
var speciesFill = defElem.append("linearGradient").attr("id", gradientID)
.attr("x1", "0%").attr("y1", "0%").attr("x2", "0%").attr("y2", "100%")
.attr("spreadMethod","pad");
speciesFill.append("stop").attr("offset", "0%").attr("stop-opacity","1").attr("stop-color", color1);
speciesFill.append("stop").attr("offset", "50%").attr("stop-opacity","1").attr("stop-color", color1);
speciesFill.append("stop").attr("offset", "100%").attr("stop-opacity","1").attr("stop-color",color2);
return gradientID;
}
/**
* returns midpoint of two sbml Nodes.
* @param {instace of Base} nodeX node X.
* @param {instace of Base} nodeY node Y.
* @return {{iX:Number,iY:Number}} position object pointing tho the midpoint.
*/
shapeUtil.getMidPoint = function(nodeX,nodeY){
console.warn(nodeX);
console.warn(nodeY);
var pointX = {iX: (nodeX.position.iX + nodeX.iWidth/2),iY: (nodeX.position.iY + nodeX.iHeight/2)};
var pointY = {iX: (nodeY.position.iX + nodeY.iWidth/2),iY: (nodeY.position.iY + nodeY.iHeight/2)}
//return {iX:(pointX.iX+pointX.iY)/2,iY: (pointY.iX+pointY.iY)/2};
return {iX:(nodeX.position.iX+nodeY.position.iX)/2,iY: (nodeX.position.iY+nodeY.position.iY)/2};
}
/**
* decodes the transform svg string to constituent factors
* @param {String} transStr string that looks like translate(88.5439453125,143.88400268554688)scale(1)
* @return {{transform:[number,number],scale:number}} transform co-ordinates
*/
shapeUtil.getScaleAndTransformFromString = function (transStr){
if(!transStr) return {translate:[0,0],scale:0};
var transPart = transStr.split('scale')[0];
var transFactors = [0,0];
if(transPart && transPart.indexOf('translate') != -1){
//bit weired right ? cant understand this? Go and learn javascript.
var transFactors = transPart.replace('translate(','').replace(')','').split(',').map(parseFloat);
if(transFactors.length != 2) transFactors = [0,0];
}
var scalePart = transStr.split('scale')[1];
var scaleFactor = 0;
if(scalePart){
scaleFactor = parseFloat(scalePart.replace('(','').replace(')',''));
}
return {translate:transFactors,scale:scaleFactor};
}
/**
* creates the resizer object
* @return {Objects} resizer object with Various helper methods.
*/
var resizer = d3scomos.resizer = (function(){
/**
* return the resize handle
* @return {[type]} [description]
*/
var dragSE = d3.behavior.drag()
//.origin(Object)
.on("dragstart",dragSEStart)
.on("drag", dragSE)
.on("dragend",dragSEEnd);
var dragSEStart = function(d){
d3.event.sourceEvent.stopPropagation();
//console.warn('drag SE Started');
}
var dragSE = function(d){
d3.event.stopPropagation();
//console.warn('dragging SE');
var thisNode = this;
if(d3.event.dx && d3.event.dy ){
thisNode.attr('x', parseFloat(thisNode.attr('x')) + d3.event.dx);
thisNode.attr('y',parseFlaot(thisNode.attr('y'))+d3.event.dy);
}
}
var dragSEEnd = function(d){
//console.warn('drag se eneded');
}
/**
* Sets up the resizer around provided node.
* @param {D3 selector} node d3 selector pointing node.
* @param {Number} resizerType resizer type value 0- 4 point ,1-8 point.
* @return {} sets up the resizer UI with provided settings.
*/
var setupResizer = function (node,resizerType){
//add group elem to the node with reisizer classed
//add respective rects
//add proper classes to these
resizerType = resizerType || 0;
var nodeData = node.datum();
var rDimensions = node.select('path').node().getBBox();
//console.warn(node.select('path').node().getBBox())
var nodeH = rDimensions.height;
var nodeW = rDimensions.width;
var h = 7;
var w = 7;
//var resizerG = node.append('g').classed('resizer',true)
//add NW
var NWRect = node.append('rect').classed('resizer',true).classed('rNW',true)
.attr('x',-w).attr('y',-h)
.attr('height',h).attr('width',w);
//add NE
var NERect = node.append('rect').classed('resizer',true).classed('rNE',true)
.attr('x',nodeW).attr('y',-h)
.attr('height',h).attr('width',w);
//add SE
var SERect = node.append('rect').classed('resizer',true).classed('rSE',true)
.attr('x',nodeW).attr('y',nodeH)
.attr('height',h).attr('width',w);
//add SW
var SWRect = node.append('rect').classed('resizer',true).classed('rSW',true)
.attr('x',-w).attr('y',nodeH)
.attr('height',h).attr('width',w);
if(resizerType == 1){
var NRect = node.append('rect').classed('resizer',true).classed('rN',true)
.attr('x',nodeW/2).attr('y',-h)
.attr('height',h).attr('width',w);
var ERect = node.append('rect').classed('resizer',true).classed('rE',true)
.attr('x',nodeW).attr('y',nodeH/2)
.attr('height',h).attr('width',w);
var SRect = node.append('rect').classed('resizer',true).classed('rS',true)
.attr('x',nodeW/2).attr('y',nodeH)
.attr('height',h).attr('width',w);
var WRect = node.append('rect').classed('resizer',true).classed('rW',true)
.attr('x',-w).attr('y',nodeH/2)
.attr('height',h).attr('width',w);
}
}
/**
* update resize handlers
* @param {D3 Selector} node d3 selector with resizer attached to it.
* @return {} updates the resizer based on the nwe sise data.
*/
var updateResizer = function(node){
if(!node)
node = d3.select('.resizer');
var nodeData = node.datum();
var rDimensions = node.select('path').node().getBBox();
//console.warn(node.select('path').node().getBBox())
var nodeH = rDimensions.height;
var nodeW = rDimensions.width;
var h = 7;
var w = 7;
node.each(function(){
var NWRect = node.select('.rNW')
.attr('x',-w).attr('y',-h)
.attr('height',h).attr('width',w);
var NERect = node.select('.rNE')
.attr('x',nodeW).attr('y',-h)
.attr('height',h).attr('width',w);
var SERect = node.select('.rSE')
.attr('x',nodeW).attr('y',nodeH)
.attr('height',h).attr('width',w);
var SWRect = node.select('.rSW')
.attr('x',-w).attr('y',nodeH)
.attr('height',h).attr('width',w);
var NRect = node.select('.rN')
.attr('x',nodeW/2).attr('y',-h)
.attr('height',h).attr('width',w);
var ERect = node.select('.rE')
.attr('x',nodeW).attr('y',nodeH/2)
.attr('height',h).attr('width',w);
var SRect = node.select('.rS')
.attr('x',nodeW/2).attr('y',nodeH)
.attr('height',h).attr('width',w);
var WRect = node.select('.rW')
.attr('x',-w).attr('y',nodeH/2)
.attr('height',h).attr('width',w);
})
}
/**
* resizes the current shape based on the resizeStatus vlaues.
* @param {
* isResizing:Boolean ,activeResizeHandle:String,
* node:{D3 selector},
* event:{D3 drag event}}; resizeStatus params required to process this resize event
* @return {} handles the drag shape resize and redraw, transform etc for both
* node shape and resize handlers
*/
var processResize = function(resizeStatus){
var thisNode = resizeStatus.node;
var thisData = thisNode.datum();
var event = resizeStatus.event;
var aspectRatio = thisData.iWidth / thisData.iHeight;
if(resizeStatus.activeResizeHandle === 'rN'){
var oldHeight = thisData.iHeight;
thisData.iHeight -= event.dy;
if(thisData.iHeight < 10 ) thisData.iHeight = 10;
thisData.position.iY -= thisData.iHeight - oldHeight;
}
else if(resizeStatus.activeResizeHandle === 'rE'){
thisData.iWidth += event.dx;
if(thisData.iWidth < 10 ) thisData.iWidth = 10;
}
else if(resizeStatus.activeResizeHandle === 'rS'){
thisData.iHeight += event.dy;
if(thisData.iHeight < 10 ) thisData.iHeight = 10;
}
else if(resizeStatus.activeResizeHandle === 'rW'){
var oldWidth = thisData.iWidth;
thisData.iWidth -= event.dx;
if(thisData.iWidth < 10 ) thisData.iWidth = 10;
thisData.position.iX -= thisData.iWidth - oldWidth;
}
else if(resizeStatus.activeResizeHandle === 'rNE'){
//rule width follows height
thisData.iHeight -= event.dy;
if(thisData.iHeight < 10 ) thisData.iHeight = 10;
thisData.iWidth = thisData.iHeight * aspectRatio;
//thisData.position.iX += event.dx;
thisData.position.iY += event.dy;
}
else if(resizeStatus.activeResizeHandle === 'rSE'){
//rule width follows height
thisData.iHeight += event.dy;
if(thisData.iHeight < 10 ) thisData.iHeight = 10;
thisData.iWidth = thisData.iHeight * aspectRatio;
//thisData.position.iX += event.dx;
//thisData.position.iY += event.dy;
}
else if(resizeStatus.activeResizeHandle === 'rSW'){
//rule width follows height
var oldWidth = thisData.iWidth;
thisData.iHeight += event.dy;
if(thisData.iHeight < 10 ) thisData.iHeight = 10;
thisData.iWidth = thisData.iHeight * aspectRatio;
thisData.position.iX += oldWidth - thisData.iWidth;
//thisData.position.iY += event.dy;
}
else if(resizeStatus.activeResizeHandle === 'rNW'){
//rule width follows height
var oldWidth = thisData.iWidth;
thisData.iHeight -= event.dy;
if(thisData.iHeight < 10 ) thisData.iHeight = 10;
thisData.iWidth = thisData.iHeight * aspectRatio;
thisData.position.iX -= thisData.iWidth - oldWidth;
thisData.position.iY += event.dy;
}
modelHelper.updateNodeView(thisNode)
updateResizer(thisNode);
//update affecting links
d3.selectAll('.link').attr('d', function(d){return shapeUtil.getPathCoordsForLine(d.source, d.target, d.role)});
}
/**
* Finds removes any resizers on from the page
* @return {D3 selection} selection of deleted resizers
*/
var clearAllResizers = function(){
return d3.selectAll('.resizer').remove();
}
return {
/**
* adds the resizer to the passed in node.
* @param {D3 selector} node vaid d3 selector to the target node.
* @return {D3 selector} d3 selector pointing to this node.
* @throws {Error} if invalid node is passed
*/
addResizer:function(node){
//console.warn(node);
if(!node)
throw new Error('Empty node value passed');
if(! (node instanceof d3.selection))
throw new Error('Pass valid d3 Selector');
if(node.size() == 0)
throw new Error('Empty d3 selctor passed');
//remove resizers if any
clearAllResizers();
//construct resizer rects assuming
if(node.datum().getEntityType() === 'Compartment')
setupResizer(node,1);
else
setupResizer(node);
},
// /**
// * finds and updates all resizer handlers or only node if node is passed
// * @param {D3 Selector} node d3 selector with resizer attached to it.
// * @return {} updates the resizer based on the nwe sise data.
// */
// updateResizer:function(node){
// updateResizer(node);
// },
/**
* resizes the current shape based on the resizeStatus vlaues.
* @param {
* isResizing:Boolean ,activeResizeHandle:String,
* node:{D3 selector},
* event:{D3 drag event}}; resizeStatus params required to process this resize event
* @return {[type]} [description]
* //NOTE: no need to rest this method seperately as this will be called internally by the
* drag method, as resize and drag behaviours are now triggered from same handler
*/
processResize:function(resizeStatus){
//process this reszie if true resize
//maybe validate resizeStatus params
//TODO: add param validation here
if(resizeStatus.isResizing == true){
processResize(resizeStatus);
}
},
/**
* clears any resizer on the current page unless node is passed.
* @return {D3 selector} d3 selector pointing to this node.
*/
clearResizer:function(){
return d3.selectAll('.resizer').remove();
},
/**
* updates the resizer hanldes by readding them on selected node.
* @return {} checks if only one node is selected and adds the resizer hanldes.
*/
updateResizer:function(){
this.clearResizer();
var _selection = d3.selectAll('.selected');
//proceed if only one item is selcted
if ( _selection.size() == 1 && !_selection.classed('reaction-node') && !_selection.classed('link')){
this.addResizer(_selection);
}
}
}
})();
/**
* Module : construction
* Takes care various construction tasks
* Has various setters and getters to set up construction configs
* For more details on the assumptions and design considerations refer to Readme.txt
*/
/**
* creates the eskin mapConstructor object
* @constructor
* @return {modelConstructor} a model constructor object
*/
function modelConstructor(rootElem,keyStore,model,operations){
var consConst = constructionConstants;
var isEnabled = false;
var factory = SBMLFactory();
var reactionConstructor = {source:null,target:null};
var isConstructingNode = false;
var construnctionConfig = {
buildingEdge :false,
buildingNode :false,
activeToolType :'',//should be one of species,compartment edges
activeTool :'',// currently selected tool form active tool type
mode :'DISCONTINUOUS',//unset values means that mode is not continuous draw.
}
/**
* any pending construnctin jobs will be flushed. s
* @return {[type]} [description]
*/
function clearConstrunction(){
reactionConstructor.source = null;
reactionConstructor.target = null;
construnctionConfig.buildingEdge = false;
construnctionConfig.buildingNode = false;
}
/**
* Resets construciton tool setting
* @return {} reset active to tool to none change construction mode etc
*/
var resetTools = function(){
if(!construnctionConfig.buildingEdge){
construnctionConfig.activeToolType = ''
construnctionConfig.activeTool = '';
//TODO: expose the event informing node construnct config change for outer
__logger.info('construnction disabled. No active tool')
dispatchToolChange();
}
else{
console.warn('not resetting tools as edge construnction is in progress.');
}
}
var dispatchToolChange = function(){
eskinDispatch.toolStateChanged(construnctionConfig);
}
function getNodeConstrunctionOptions(event){
// based on current tool construct a new object with aboce co ordinates
var SBMLConst = SBMLConstants.defaults[construnctionConfig.activeTool];
var _position = modelHelper.getTransformedCordinates(rootElem,event);
//normalize _position
_position.iX -= SBMLConst.iWidth/2;
_position.iY -= SBMLConst.iHeight/2;
var options = {iHeight:SBMLConst.iHeight,
iWidth:SBMLConst.iWidth,
position:_position,
sType:getMappedStypeFromTool(construnctionConfig.activeTool)
};
options.sSpeciesGroup = getMappedGroupFromStype(options.sType);
return options;
}
function getReactionConstrunctionOptions(){
var SBMLConst = SBMLConstants.defaults[construnctionConfig.activeTool];
var _position = shapeUtil.getMidPoint(reactionConstructor.source,reactionConstructor.target);
var options = {sId:keyStore.getNextReaction(),
iHeight:SBMLConst.iHeight,
iWidth:SBMLConst.iWidth,
position:_position,
sType:getMappedStypeFromTool(construnctionConfig.activeTool)
};
var reaction = factory.getReaction(options);
reaction.addReactant(reactionConstructor.source);
reaction.addProduct(reactionConstructor.target);
return reaction;
}
/**
* Adds node to model based on current event and construction settings
* @param {D3 event} event D3 event ( generally mouse down on canvas)
* @return {} adds node to model and to View sets up entry in undo manager
*/
var _constructNode = function (event){
if(!construnctionConfig.activeToolType){
__logger.info('Construnction aborted : no active tool selected')
return;
}
// add model
// refresh View
// update undo manager
try{
if(!construnctionConfig.buildingNode || construnctionConfig.buildingEdge ){
construnctionConfig.buildingNode = true;//mark that Construnction is active
switch (construnctionConfig.activeToolType) {
case 'SPECIES':
var options = getNodeConstrunctionOptions(event);
options.sId = keyStore.getNextSpecies();
operations.addSpecies(options);
//construnctionConfig.buildingNode = false;//construnction done.
operations.refreshView();
break;
case 'COVALENT':
//this operations is allowed only on species which are not complex
var thisTarget = d3.select(event.target);
var thisData = thisTarget.datum();
if(!thisData){
construnctionConfig.buildingNode = false;
return "";
}
var options = thisData; //so that sid could be returned
if(thisData.getEntityType() === 'Species' && thisData.sType !== 'Complex'){
operations.addCovalantModification(thisData.sId,construnctionConfig.activeTool);
}
//construnctionConfig.buildingNode = false;//construnction done.
break;
case 'COMPARTMENT':
var options = getNodeConstrunctionOptions(event);
options.sId = keyStore.getNextCompartment();
operations.addCompartment(options);
//construnctionConfig.buildingNode = false;//construnction done.
break;
case 'REACTION' :
var thisNode = d3.select(event.target).datum();
if(!thisNode) return "";
var entityType = thisNode.getEntityType();
if(!construnctionConfig.buildingEdge){
//record source.
if(verifytoolSource(construnctionConfig.activeTool,entityType)){
console.warn('Buildong reaction : ' + construnctionConfig.activeTool);
construnctionConfig.buildingEdge = true;
reactionConstructor.source = thisNode;
return "";//nothing to choose
}else{
console.warn('invalid source '+thisNode.sId + " for tool : "+construnctionConfig.activeTool);
clearConstrunction();
return "";//nothing to choose
}
}else{
//record target.
if(verifytoolTarget(construnctionConfig.activeTool,entityType)){
switch (construnctionConfig.activeTool) {
case 'ADDPRODUCT':
try{
operations.addProduct(reactionConstructor.source.sId,{sId:thisNode.sId});
construnctionConfig.buildingNode = false;//construnction done.
construnctionConfig.buildingEdge = false;
return reactionConstructor.source.sId;
}
catch(err){
//throw error event so that in can be handled outside.
console.warn('Add Product failed: '+err.message);
clearConstrunction();
eskinDispatch.constructionError({message:'Add Product failed: '+err.message});
}
break;
case 'ADDREACTANT':
try{
operations.addReactant(thisNode.sId,{sId:reactionConstructor.source.sId});
construnctionConfig.buildingNode = false;//construnction done.
construnctionConfig.buildingEdge = false;
return thisNode.sId;
}
catch(err){
//throw error event so that in can be handled outside.
console.warn('Add Reaction failed: '+err);
clearConstrunction();
eskinDispatch.constructionError({message:'Add Reactant failed: '+err.message});
}
break;
case 'ACTIVATOR':
try{
operations.addModifier(thisNode.sId,{sId:reactionConstructor.source.sId,sModifierType:"Activator"});
construnctionConfig.buildingNode = false;//construnction done.
construnctionConfig.buildingEdge = false;
return thisNode.sId;
}
catch(err){
//throw error event so that in can be handled outside.
console.warn('Add Modifier failed: '+err.message);
clearConstrunction();
eskinDispatch.constructionError({message:'Add Modifier failed: '+err.message});
}
break;
case 'INHIBITOR':
try{
operations.addModifier(thisNode.sId,{sId:reactionConstructor.source.sId,sModifierType:"Inhibitor"});
construnctionConfig.buildingNode = false;//construnction done.
construnctionConfig.buildingEdge = false;
return thisNode.sId;
}
catch(err){
//throw error event so that in can be handled outside.
console.warn('Add Modifier failed: '+err.message);
clearConstrunction();
eskinDispatch.constructionError({message:'Add Modifier failed: '+err.message});
}
break;
default:
//means source is allready recored. record target
//and construnct reactions.
construnctionConfig.buildingEdge = false;
//construnctionConfig.buildingNode = false;//construnction done.
reactionConstructor.target = thisNode;
var options = getReactionConstrunctionOptions();
operations.addReaction(options);
//construnctionConfig.buildingNode = false;//construnction done.
}
}
}
break;
case 'MODIFIER':
break;
default:
console.warn('No active Tool :Construnction Aborted');
}
}
//construnctionConfig.buildingNode = false;//construnction done.
if(options) return options.sId;
return "";
}catch(err){
construnctionConfig.buildingNode = false;//construnction done.
construnctionConfig.buildingEdge = false;//construnction done.
__logger.error("construct node operation failed. "+err.message);
return "";
}
}
/**
* ToolName for active Tool
* @param {String} toolName
* @return {string} current active toolName
* @throws {Error} throws error if invaid toolName specified
*/
var _setActiveTool = function(toolName){
//find category of this tool
var toolFound = false;
for( var category in consConst.tools){
if(consConst.tools[category].indexOf(toolName)!== -1){
//update config
construnctionConfig.activeToolType = category.toUpperCase();;
construnctionConfig.activeTool = toolName.toUpperCase();
toolFound = true;
clearConstrunction();
break;
}
}
if(!toolFound)
throw new Error('Invalid toolName : '+toolName +". Not supported by library.")
__logger.info(toolName + " is active tool.")
dispatchToolChange();
}
/**
* function checks if the event.target is valid i.e. allowed for construnction.
* @param {event} event Event object to be validated.
* @return {Boolean} is valid target or not.
*/
function isValidEventTarget(event){
var target = event.target;
if(!target) return false; //target must exist
if(target.tagName === 'svg')
return true;
var thisData = d3.select(target).datum();
if(construnctionConfig.activeToolType.toUpperCase() === 'COVALENT' && (thisData && thisData.getEntityType() === 'Species' && thisData.sType.toUpperCase() !== 'COMPLEX')){
return true;
}
if(construnctionConfig.activeToolType.toUpperCase() === 'SPECIES' && (thisData && thisData.getEntityType() === 'Species' && thisData.sType.toUpperCase() === "COMPLEX")){
return true
}
if(construnctionConfig.activeToolType.toUpperCase() === 'REACTION' )//|| (thisData && thisData.getEntityType() === 'Species' && thisData.sType.toUpperCase() === 'COMPLEX')
return true;
return false;
}
return {
enable:function(){
isEnabled = true;
},
disable:function(){
isDisabled = false;
//TODO: clear tools
},
/**
* Adds node to model based on current event and construction settings
* @param {D3 event} event D3 event ( generally mouse down on canvas)
* @return {} adds node to model and to View sets up entry in undo manager
*/
constructNode:function(event){
var _sId ;
if(isEnabled && isValidEventTarget(event)){
_sId = _constructNode(event);
}
//mark this node selected
var node;
if(_sId){
switch (construnctionConfig.activeToolType) {
case 'SPECIES':
node = d3.selectAll(".species-node").filter(function(d){return d.sId === _sId});
break;
case 'COVALENT':
//TODO: figure out way to select the construncted covalent instead
node = d3.selectAll(".species-node").filter(function(d){return d.sId === _sId});
break;
case 'COMPARTMENT':
node = d3.selectAll(".compartment").filter(function(d){return d.sId === _sId});
break;
case 'REACTION' :
console.warn('Buildong reaction' + construnctionConfig.activeTool);
break;
default:
}
if(construnctionConfig.mode === 'DISCONTINUOUS'){
resetTools();
}
if(node)
modelHelper.triggerClickOnNode(node);
//this is IMPORTANT : don't reset this value before the node select is triggered. Other wise
//construnction will be triggered reslulting infinite loop
setTimeout(function(){
construnctionConfig.buildingNode = false;//construnction done.
})
}
else{
__logger.warn("Construction mode not enabled");
}
},
/**
* set current active tool if construnction enabled
* @param {String} toolName [description]
* @return {String} current active toolName
* @throws {Error} throws error if invaid toolName specified
*/
setActiveTool:function(toolName){
if(isEnabled)
_setActiveTool(toolName);
},
/**
* sets the construnction mode to correct values dispatches event informing said changed
* @param {String} mode valid values CONTINUOUS and DISCONTINUOUS
* @return {[type]} [description]
*/
setConstrunctionMode:function(mode){
switch (mode) {
case 'CONTINUOUS':
construnctionConfig.mode = mode;
break;
case 'DISCONTINUOUS':
construnctionConfig.mode = mode;
break;
default:
__logger.console.warn("invalid construnction mode : " +mode + "specified");
}
dispatchToolChange();
},
/**
* returns the source object if reaction is being built else returns false;
* @return { Species||Reaction || undefined} source object if constructing edge else undefined.
*/
isConstructingEdge:function(){
return construnctionConfig.buildingEdge;
},
/**
* stops current construnction operation, without resetting the tools.
* @return {[type]} [description]
*/
stopCurrentOperation : function(){
clearConstrunction();
},
/**
* returns the private reactionConstructor varialbe which tracks sources and target for the edge to be drawn.
* @return {{source:SBMLNode,target:SBMLNode}} [description]
*/
getReactionConstructor:function(){
return reactionConstructor;
},
updateRootElem : function(newRootElem){
rootElem = newRootElem;
},
getDetails : function(){
return construnctionConfig;
}
}
}
/**
* Will hold all the constants regarding the construction functionality.
* make sure contants from this file are exclusively used inside the construction module only
* as this file is part of conditional build.
*/
var constructionConstants = {};
constructionConstants.tools = {
species:['SIMPLECHEMICAL','GENERICPROTEIN','GENE','RNA','RECEPTOR',
'PHENOTYPE','PERTURBINGAGENT','SOURCEORSINK','LIGAND',
'TRANSCRIPTIONFACTOR','ENZYME','COMPLEX'],
compartment:['RECTANGULAR','CIRCULAR'],
covalent:['PHOSPHORYLATION','LIPIDATION','UBIQUITINATION','GLYCOSYLATION','ACETYLATION','OTHER'],
reaction:['GENERAL','TRANSPORT','TRANSCRIPTION','TRANSLATION','COMPLEXFORMATION','COVALENTMODIFICATION','ADDPRODUCT','ADDREACTANT','ACTIVATOR','INHIBITOR'],
}
constructionConstants.covalentToolMappings = {'PHOSPHORYLATION':'P','LIPIDATION':'L','UBIQUITINATION':'U',
'GLYCOSYLATION':'G','ACETYLATION':'A','OTHER':'O'};
constructionConstants.toolToTargetMapping = {
'GENERAL' :{source:['Species'],target:['Species']},
'TRANSPORT' :{source:['Species'],target:['Species']},
'TRANSCRIPTION' :{source:['Species'],target:['Species']},
'TRANSLATION' :{source:['Species'],target:['Species']},
'COMPLEXFORMATION' :{source:['Species'],target:['Species']},
'COVALENTMODIFICATION':{source:['Species'],target:['Species']},
'ADDPRODUCT' :{source:['Reaction'],target:['Species']},
'ADDREACTANT' :{source:['Species'],target:['Reaction']},
'ACTIVATOR' :{source:['Species'],target:['Reaction']},
'INHIBITOR' :{source:['Species'],target:['Reaction']},
}
var typeMappings = {
//--species type mapping
"Simple Chemical" :"SIMPLECHEMICAL",
"Generic Protein" :"GENERICPROTEIN",
"DNA (Gene)" :"GENE",
"RNA" :"RNA",
"Receptor" :"RECEPTOR",
"Phenotype" :"PHENOTYPE",
"Perturbing Agent" :"PERTURBINGAGENT",
"Source/Sink" :"SOURCEORSINK",
"Ligand" :"LIGAND",
"Transcription Factor":"TRANSCRIPTIONFACTOR",
"Enzyme" :"ENZYME",
"Complex" :"COMPLEX",
"REACTION" :"REACTION",
"Invalid Molecule(s)":"GENE",
//--- compartment type mappings
"Rectangular" :"RECTANGULAR",
"Circular" :"CIRCULAR",
//-- following are reaction type mappings
"General" :"GENERAL",
"Transport" :"TRANSPORT",
"Transcription" :"TRANSCRIPTION",
"Translation" :"TRANSLATION",
"Complex Formation" :"COMPLEXFORMATION",
"Covalent Modification" : "COVALENTMODIFICATION",
}
var groupMapping ={
'Group 1':['Generic Protein','DNA (Gene)','RNA','Receptor','Transcription Factor','Enzyme'],
'Group 2':['Simple Chemical','Phenotype','Perturbing Agent','Source/Sink','Ligand']
}
function getMappedGroupFromStype(sType){
if(groupMapping['Group 1'].indexOf(sType) != -1) return 'Group 1';
return 'Group 2';
}
function getMappedStypeFromTool(symbolVal){
var typeKeys = d3.keys(typeMappings);
for(var key in typeKeys){
if(typeMappings[typeKeys[key]] === symbolVal)
return typeKeys[key];
}
}
function verifytoolSource(toolName,entityType){
var toolMapping = constructionConstants.toolToTargetMapping[toolName];
if(toolMapping){
return toolMapping.source.indexOf(entityType) != -1;
}
else{
__logger.warn('Invalid ToolType'+ toolName+' specified in toolMappings')
return false;
}
}
function verifytoolTarget(toolName,entityType){
var toolMapping = constructionConstants.toolToTargetMapping[toolName];
if(toolMapping){
return toolMapping.target.indexOf(entityType) != -1;
}
else{
__logger.warn('Invalid ToolType'+ toolName+' specified in toolMappings')
return false;
}
}
/**
* Barchart add on for d3 library
*
**/
d3scomos.barChart = function module() {
var margin = {top: 20, right: 20, bottom: 40, left: 40},
width = 500,
height = 800,
gap = 0,
ease = 'cubic-in-out';
var svg, duration = 500;
var dispatch = d3.dispatch('customHover');
function exports(_selection) {
_selection.each(function(_data) {
var chartW = width - margin.left - margin.right,
chartH = height - margin.top - margin.bottom;
var x1 = d3.scale.ordinal()
.domain(_data.map(function(d, i){ return i; }))
.rangeRoundBands([0, chartW], .1);
var y1 = d3.scale.linear()
.domain([0, d3.max(_data, function(d, i){ return d; })])
.range([chartH, 0]);
var xAxis = d3.svg.axis()
.scale(x1)
.orient('bottom');
var yAxis = d3.svg.axis()
.scale(y1)
.orient('left');
var barW = chartW / _data.length;
if(!svg) {
svg = d3.select(this)
.append('svg')
.classed('chart', true);
var container = svg.append('g').classed('container-group', true);
container.append('g').classed('chart-group', true);
container.append('g').classed('x-axis-group axis', true);
container.append('g').classed('y-axis-group axis', true);
}
svg.transition().duration(duration).attr({width: width, height: height})
svg.select('.container-group')
.attr({transform: 'translate(' + margin.left + ',' + margin.top + ')'});
svg.select('.x-axis-group.axis')
.transition()
.duration(duration)
.ease(ease)
.attr({transform: 'translate(0,' + (chartH) + ')'})
.call(xAxis);
svg.select('.y-axis-group.axis')
.transition()
.duration(duration)
.ease(ease)
.call(yAxis);
var gapSize = x1.rangeBand() / 100 * gap;
var barW = x1.rangeBand() - gapSize;
var bars = svg.select('.chart-group')
.selectAll('.bar')
.data(_data);
bars.enter().append('rect')
.classed('bar', true)
.attr({x: chartW,
width: barW,
y: function(d, i) { return y1(d); },
height: function(d, i) { return chartH - y1(d); }
})
.on('mouseover', dispatch.customHover);
bars.transition()
.duration(duration)
.ease(ease)
.attr({
width: barW,
x: function(d, i) { return x1(i) + gapSize/2; },
y: function(d, i) { return y1(d); },
height: function(d, i) { return chartH - y1(d); }
});
bars.exit().transition().style({opacity: 0}).remove();
duration = 500;
});
}
exports.width = function(_x) {
if (!arguments.length) return width;
width = parseInt(_x);
return this;
};
exports.height = function(_x) {
if (!arguments.length) return height;
height = parseInt(_x);
duration = 0;
return this;
};
exports.gap = function(_x) {
if (!arguments.length) return gap;
gap = _x;
return this;
};
exports.ease = function(_x) {
if (!arguments.length) return ease;
ease = _x;
return this;
};
d3.rebind(exports, dispatch, 'on');
return exports;
};
/**
* SBML graph : accepts the data in scomos model format and plots the basic force directed graph
* using d3 force layout
**/
//TODO: need to change file name once the library name is decided
/**
* Exports scomosGraph : creates d3 force graph based scomos data model
* this graph is strictly bound the scomos model data structure
*/
d3scomos.scomosGraph = function scomosGraph() {
/** Some defaults change them accordingly **/
var margin = {top: 20, right: 20, bottom: 40, left: 40},
width = 1500,
height = 1500;
var svg, duration = 500;
var graphRoot;
var oneTime =false;
/** export to hold data specific to this graph instance **/
var data = new ModelDataApi();
//set oneTIme falg
/** scomos selections object to manage node selection logic **/
var selection;
/** pan mode **/
var __panMode = "PAN";//defaults to PAN another valid values will be select
var zoomString;
/** custom event dispatcher **/
var dispatch = d3.dispatch('speciesHover','speciesClick',
'reactionHover','reactionClick',
'linkHover','linkClick',
'compartmentHover','compartmentClick',
'covalentModificationClick');
/**
* draws chart on current data
* @param injectInto {String} fully qualified d3 selector
* @returns draws scomos model in specified html element
*/
function __generateChart( injectInto,mode){
mode=mode||'REDRAW';
//mode is redraw remove previous drawings and selections
if(mode==='REDRAW'){
console.info('Redraw operation triggered');
init();
update();
}
else if(mode==='UPDATE'){
console.info('Update operation triggered');
update();
}
function init(){
graphRoot = injectInto;
/** init selections **/
//selection = selection || new scomosSelections(injectInto);
//if(!data.getScomosSelection()){
data.storeScomosSelection(new scomosSelections(injectInto))
//}
selection = data.getScomosSelection();
// add svg canvas to page
if(svg)
d3.select(injectInto).selectAll('svg').remove();
svg = d3.select(injectInto)
.append('svg');
//if no data return this is required if graph is generated by non angular scripts
//also this makes function testable
if(!data.getHeight()) return;
shapeUtil.initGradients(injectInto);
var boundaries = data.getBoundaryPoints();
svg.attr("height","700")
.attr("width","100%");
svg.attr("viewBox",boundaries.xNeg + " " + boundaries.yNeg + " " + data.getWidth() + " " + data.getHeight())
.attr("preserveAspectRatio", "xMinYMin meet");
svg = svg.append('g');
//develop your graph here
var force=d3.layout.force()
.size([200,200])
.nodes([])
.links([]);
}
//update height and widht
/*svg.attr("height",boundaries.yPos-boundaries.yNeg + 150)
.attr("width",boundaries.xPos-boundaries.xNeg + 150);
*/
//update the graph
function update(){
var speciesNodes = data.getSpeciesList(); //objToArrayOfObj(speciesData);
var reactionNodes = data.getReactionList();
var links = modelHelper.getEdgeList(reactionNodes,speciesNodes);
var compartmentNodes = data.getCompartmentList();
//var covalentModifications = modelHelper.getModifierList(speciesNodes)
//svg.remove();
var compartments = svg.selectAll('.compartment')
.data(compartmentNodes)
.enter()
.append('g')
.attr("transform", function(d)
{ return "translate(" + d.position.iX + "," + d.position.iY + ")"; })
.attr('class',function(d){return d.sId !== 'default' ? 'compartment' : 'defCompartment'});
compartments.append('path')
.attr('class', 'compartment-path')
.attr('d',function(d){
if(d.sType == "RECTANGULAR"){
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}else if(d.sType == "CIRCULAR"){
return shapeUtil.getEllipseWithTickness(d.iHeight, d.iWidth,10);
}else{
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}
})
.attr('style',function(d){
//dont show default compartment
if(d.sId === 'default') return;
return 'fill:'+'rgb('+d.color.iRed+','+d.color.iGreen+','+d.color.iBlue+')';
});
//compartments.on('mousedown',mouseDownOnCompartment);
compartments.on('click',mouseClickedOnCompartment);//there is no special click event handler here
compartments.on('mouseover', dispatch.compartmentHover);
compartments.append('text')
.attr('text-anchor','middle')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return 0;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
var link = svg.selectAll('.link')
.data(links)
.enter()
.append('path')
.attr('class', 'link')
.attr('d', function(d){return shapeUtil.getPathCoordsForLine(d.source, d.target, d.role)})
.attr("style", function(d){
var marker;
switch(d.role){
case "Reactant":
if(d.reversible)
marker = "marker-mid:url(#filledArrow);";
break;
case "Product":
marker = "marker-mid:url(#filledArrow);";
break;
case "Modifier":
if(d.modifierType === 'Inhibitor')
marker = "marker-mid:url(#Line);";
else //defaults ot activator
marker = "marker-mid:url(#hollowArrow);";
break;
case "modifier_Inhibitor":
marker = "marker-mid:url(#Line);";
break;
case "modifier_Activator":
marker = "marker-mid:url(#hollowArrow);";
break;
default:
marker = "";
}
return marker+" stroke:"+d.color+";";
})
.on('mousedown', mouseDownOnLink);
link.on('click', dispatch.linkClick)
.on('mouseover', dispatch.linkHover);
var node = svg.selectAll('.species-node')
.data(speciesNodes)
.enter()
//.append('circle')
.append('g')
.attr('class','species-node');
//add shape
node.append('path')
.attr('d',function(d){
/*var shapeName = shapeUtil.resolveShape(d.enTypes);*/
return d3scomos.getSymbol(d.sType,d);
})
.attr('class', 'species-path')
.attr('fill','url(#speciesLinear)');
/*<text text-anchor="middle"
x="60" y="75">A</text>
*/
//add text
node.append('text')
.attr('text-anchor','middle')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return d.iWidth/2;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
node.on('mouseover', dispatch.speciesHover)
.on('click', clickOnSpecies);
//node.on('click',dispatch.speciesClick);
//dispatch.on("speciesClick",clickOnSpecies);
//transform these nodes there right posistions
node.attr("transform", function(d)
{ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
//for each species-node, renders its COVALENT MODIFICATIONS
node.each(function(d){
var thisNode = d3.select(this);
var thisNodeData = d;
//add svg elements
var modifierListOfThisNode = modelHelper.getModifierListOfNode(thisNodeData);
var modifierNodesOfThisNode = thisNode.selectAll('.modifier-node')
.data(modifierListOfThisNode)
.enter()
.append('g').attr('class', 'modifier-node');
modifierNodesOfThisNode.append('path')
.attr('class', 'modifier-path')
.attr('d', function(d){
return shapeUtil.getEllipse(16, 16, d.parentSpecies.iWidth + 8 + d.pos*16, d.parentSpecies.iHeight - 8);
});
//.attr('style', "stroke-width: 1px; stroke: #000000; fill : #ffffff;");
modifierNodesOfThisNode.append('text')
.attr('x', function(d){return d.parentSpecies.iWidth + 12 + d.pos*16})
.attr('y', function(d){return d.parentSpecies.iHeight + 4})
.attr('class', "text-node")
.text(function(d){return d.modificationType});
});
var covalentModification = d3.selectAll('.modifier-node');
covalentModification.on('click', clickOnCovalentModification);
//svg.selectAll('.reactionNode').remove();
var reactions = svg.selectAll('.reaction-node')
.data(reactionNodes)
.enter()
.append('g')
.attr('class','reaction-node');
reactions.append('path')
.attr('d',function(d){
console.info("adding reaction : "+d.sId);
return d3scomos.getSymbol('REACTION',d);
})
.attr('class', 'reaction-path')
.attr('fill','url(#reactionLinear)');
reactions.append('text')
.attr('text-anchor','start')
//TODO: used static locations assuming node size + 20 + 5 padding
.attr('x',function(d){return 25;})
//TODO: used static locations assuming node hiehgt + 20/2 + 5 padding
.attr('y',function(d){return 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
reactions.attr("style", function(d){
var reactionColor = "rgb("+d.color.iRed+","+d.color.iGreen+","+d.color.iBlue+")";
return "fill: "+reactionColor+"; stroke: "+reactionColor+";";
})
.on('mouseover', dispatch.reactionHover)
.on('click', clickOnReaction);
//.on('click', dispatch.reactionClick);
//transform reaction nodes there positions
reactions
.attr("transform", function(d)
{ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
d3.select("svg").on('mousedown', mouseClickedOnSVG);
d3.select("body")
.on("keydown", function() {
d3.event.stopPropagation();
if(d3.event.keyCode==65 && d3.event.ctrlKey){
d3.selectAll('.species-node').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
d3.selectAll('.reaction-node').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
d3.selectAll('.link').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
d3.selectAll('.compartment').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
}
});
var drag = d3.behavior.drag()
// .origin(function(d) {
// return {x:d.position.iX,y:d.position.iY}; })
.on("dragstart", dragstarted)
.on("drag", dragged)
.on("dragend", dragended);
//apply this drag on nodes
node.call(drag);
//apply this drag on reaction node
reactions.call(drag);
//apply drag to compartments
compartments.call(drag);
//apply drag to covalent modifications (these are not dragable; but used since selection logic is also part of drag logic)
covalentModification.call(drag);
//experimental zoom behaviour
//TODO zoom bound are static make them configurable
var zoomBehaviour = d3.behavior.zoom().
scaleExtent([0.5, 10])
.on("zoom", zoom);
d3.select(injectInto).select('svg').call(zoomBehaviour);
}
function dragstarted(d) {
d3.event.sourceEvent.stopPropagation();
//treat drag started as the mouseDown event
//do only selection logic in drag started no drag logic here
//leave that to dragged method
//ignore ctrl press in drag started
if(!d3.event.sourceEvent.ctrlKey){
//deselect all if this is not selected one
//if selected this could be the case of the drag
//so let dragged or clicked event handle further state
if(!d3.select(this).classed('selected')){
d3.selectAll('.selected').classed('selected',false);
//clean up the selection
selection.clear();
}
modelHelper.selectNode(d3.select(this));
selection.addNode(d3.select(this));
}
}
var isDragged = false;
function dragged(d) {
//process drag only if true drag
if(d3.event.dx != 0 || d3.event.dy != 0)
{
isDragged = true;
if(d3.event.sourceEvent.ctrlKey){
//mark this as selected
modelHelper.selectNode(d3.select(this));
selection.addNode(d3.select(this));
}
/*//make all selected dragging
d3.selectAll('.selected').classed('dragging',true);
//drag all selected but links
d3.selectAll('.dragging').filter(function(){
//remove lines from this selection
return !d3.select(this).classed('link');
})
.each(function(d){
d.position.iX = d3.event.dx + d.position.iX;
d.position.iY = d3.event.dy + d.position.iY;
d3.select(this).attr("transform", "translate(" + d.position.iX + "," + d.position.iY + ")")
});*/
var dragables = selection.getDraggableSelection();
dragables.forEach(function(thisNode){
var node = d3.select(thisNode[0][0]);
//drag if neither an edge nor a covalent modification
if(!node.classed('link') && !node.classed('modifier-node')){
//console.info(node.attr('class'));
node.classed('dragging',true);
}
});
//console.info(d3.selectAll('.dragging'));
d3.selectAll('.dragging').each(function(d){
d.position.iX = d3.event.dx + d.position.iX;
d.position.iY = d3.event.dy + d.position.iY;
d3.select(this).attr("transform", "translate(" + d.position.iX + "," + d.position.iY + ")")
})
//update affecting links
svg.selectAll('.link').attr('d', function(d){return shapeUtil.getPathCoordsForLine(d.source, d.target, d.role)});
}
}
function dragended(d) {
if(isDragged){
isDragged=false;
console.log("drag ended");
//do not handle any selection logic in drag end only dragging logic
d3.selectAll(".dragging").classed("dragging", false);
//update parent child relationShip of dragged elements
selection.updateDraggableSelection(data);
}
}
//Zoom behaviour experimental
function zoom() {
//zoomBehaviour.translate([d3.event.sourceEvent.x, d3.event.sourceEvent.y]);//reset translate if any
if(__panMode.toUpperCase() === "PAN"){
//d3.event.stopPropagation();
d3.select(injectInto).select('g')
.attr("transform", "translate(" + d3.event.translate + ")scale(" + d3.event.scale + ")");
//store thsese zoom settings for refreshing the graph
zoomString = "translate(" + d3.event.translate + ")scale(" + d3.event.scale + ")";
data.storeZoom(zoomString);
}
if(__panMode.toUpperCase() === "SELECT"){
d3.select(injectInto).select('g')
.attr("transform","scale(" + d3.event.scale + ")");
//store thsese zoom settings for refreshing the graph
zoomString = "translate(" + d3.event.translate + ")scale(" + d3.event.scale + ")";
data.storeZoom(zoomString);
//.attr("transform", "translate(" + d3.event.translate + ")scale(" + d3.event.scale + ")");
//draw/update a selection rect
/*if(!d3.select("#selection-rect")[0][0]){
//add a rect at this point
*//**
* <rect x="10" y="10" width="100" height="100" stroke="blue" fill="purple"
fill-opacity="0.5" stroke-opacity="0.8"/>
*//*
d3.select(injectInto)
.select('svg')
.select('g')
.append("rect")
.classed("selection-rect",true)
.attr("x",function(){return d3.event.sourceEvent.clientX})
.attr("y",function(){return d3.event.sourceEvent.clientY})
.attr("height","100")
.attr("height","200");
console.log(d3.select(".selection-rect"));
}
else
{
var selectionRect = d3.select(".selection-rect");
//upate dimenstins
selectionRect.attr("height",function(){selectionRect.attr("y")-d3.event.sourceEvent.clientY});
selectionRect.attr("width",function(){selectionRect.attr("x")-d3.event.sourceEvent.clientX});
}*/
}
//zoom irrespectively
}
//TODO : create node lookup structure so that force layout can perform its calculations
//force.start();
/** this is added here for testing
* TODO find way to refactor this to seperate file
*/
/**
* scomosGraphBehaviours : refactored from scomosGraph to minimize the file size
* Will contain :
* various event handler functions
* d3 behaviours(drag,zoom) and handlers
* All these are re factored from scomosGraph so will be very specific to scomosGraph.
* Note : no need to write seperate test for these as these functions will be tested from scomosGraph_tests.js
*/
//function mouseDownOnSpecies(d){
function clickOnSpecies(d){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisSpecies = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisSpecies.classed("selected", true);
//clean up the selection
selection.addNode(thisSpecies);
}
else{
//toggle speciesSelection
thisSpecies.classed('selected',!thisSpecies.classed('selected'));
//add to selection if it is selected
if(thisSpecies.classed('selected'))
selection.addNode(thisSpecies);
else
selection.removeNode(thisSpecies);
}
//dispatch.on("speciesClick");
dispatch.speciesClick(d);
}
function clickOnCovalentModification(d,i){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
var thisModification = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisModification.classed("selected", true);
//clean up the selection
selection.addNode(thisModification);
}
else{
//toggle speciesSelection
thisModification.classed('selected',!thisModification.classed('selected'));
//add to selection if it is selected
if(thisModification.classed('selected'))
selection.addNode(thisModification);
else
selection.removeNode(thisModification);
}
dispatch.covalentModificationClick(d,i)
}
//function mouseDownOnReaction(d){
function clickOnReaction(d,i){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisReaction = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisReaction.classed("selected", true);
selection.addNode(thisReaction);
}
else{
//toggle reactionSelection
thisReaction.classed('selected',!thisReaction.classed('selected'));
//add to selection if it is selected
if(thisReaction.classed('selected'))
selection.addNode(thisReaction);
else
selection.removeNode(thisReaction);
}
//select edges involving this reaction
d3.selectAll('.link').filter(function(thisLink){
var _source = thisLink.source;
var _target = thisLink.target;
var thisID = thisReaction.datum().sId;
return _source.sId === thisID || _target.sId === thisID;
}).classed('selected',thisReaction.classed('selected')); //links follow the state of reaction node
//dispatch click event for user defined hadlers
dispatch.reactionClick(d,i);
}
function mouseDownOnLink(d){
//function clickOnLink(d){
//propagate this event one level above so that g element will handle it
//fixes dragging problem
d3.event.stopPropagation();
//if (d3.event.defaultPrevented) return;
var thisLink = d3.select(this);
if(!d3.event.ctrlKey){
//deselect all and select this link
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisLink.classed("selected", true);
selection.addNode(thisLink);
}
else{
//toggle link selection
thisLink.classed('selected',!thisLink.classed('selected'));
//add to selection if it is selected
if(thisLink.classed('selected'))
selection.addNode(thisLink);
else
selection.removeNode(thisLink);
}
}
function mouseDownOnCompartment(d,i){
d3.event.stopPropagation();
/*if (d3.event.defaultPrevented) return;*/
/* //expose event to external click handler
dispatch.compartmentClick(d,i);*/
}
function mouseClickedOnCompartment(d,i){
console.info("compartment clikced "+d.sId);
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisCompartment = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisCompartment.classed("selected", true);
//clean up the selection
selection.addNode(thisCompartment);
}
else{
//toggle speciesSelection
thisCompartment.classed('selected',!thisCompartment.classed('selected'));
//add to selection if it is selected
if(thisCompartment.classed('selected'))
selection.addNode(thisCompartment);
else
selection.removeNode(thisCompartment);
}
selection.updateDraggableSelection(data);
selection.updateDraggableSelection(data);
dispatch.compartmentClick(d,i);
}
function mouseClickedOnSVG(d){
if (d3.event.defaultPrevented) return;
d3.event.stopPropagation();
if(__panMode.toUpperCase() === "SELECT"){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
}
}
/*function mouseDownOnCanvas(d){
;
}*/
/** handle selection if select mode and selection rects are found **/
function mouseUpOnCanvas(d)
{
var selectionRect = d3.select("#selection-rect");
//selectionRect.remove();
console.info("mouse up on canvas");
}
//TODO : this is a temporary fix to detect dropping in canvas
//after the drawing is done aupdate all canvases to actual draw size
if( false/*data.getOnetime()*/){
console.info('running one time compartment adjustment fix')
data.setOnetime(false);
d3.select(injectInto)
.selectAll('.compartment')
.each(function(d){
var thisCompartment = d3.select(this);
var thisData = thisCompartment.datum();
var rect = d3.select(this).node().getBBox();
/*
* height: 2005.953125
width: 2496.21240234375
x: -15.8125
y: -0.0000026172481284447713
*/
try{
thisData.iHeight = rect.height;
thisData.iWidth = rect.width;
/*thisData.position.iX = rect.x;
thisData.position.iY = rect.y;*/
}catch(error){
console.error("failed one time bound update for " + thisData.sId);
}
});
}
}
/** process current selection
* this is method more angular specific going ahead needs refactor
*/
function exports() {
/**//** this check is added to support angular specific selection
* which have both html element and data embeded into them
*//*
if(_selection.hasOwnProperty('each'))
{
_selection.each(function(_data) {
*//** init this chart instance with new data **//*
if(!_data || _data ==="")
return;
data = new ModelDataApi(_data);
//_selection.call(__generateChart(_selection));
__generateChart(_selection[0][0]);
});
}
else{
//handles non angular init calls
//pass on the reference of current DOM element for injecting chart into
__generateChart(_selection);
}*/
}
exports.width = function(_x) {
if (!arguments.length) return width;
width = parseInt(_x);
return this;
};
exports.height = function(_x) {
if (!arguments.length) return height;
height = parseInt(_x);
duration = 0;
return this;
};
exports.ease = function(_x) {
if (!arguments.length) return ease;
ease = _x;
return this;
};
exports.setPanMode = function(__mode){
__mode = __mode.toUpperCase();
switch (__mode) {
case "PAN":
__panMode = __mode;
break;
case "SELECT":
__panMode = __mode;
break;
default:
console.log("Invalid pan mode " + __mode + " defaulting mode PAN")
__panMode = "PAN";
break;
}
}
/** accepts the modelData and initializes the modelData api with passed data **/
exports.data = function(__modelData){
if(__modelData)
data.setData(__modelData);
return data;
};
/** accepts constructor param for selections object and exposes internal selection object **/
exports.selections = function()
{
return selection;
}
/** export chartGenerator **/
exports.generate = function(__elem,__modelData){
if(__modelData)
data.setData(__modelData);
__generateChart(__elem);
}
exports.refresh = function(){
//this will select the nodes if any in selection
if(graphRoot){
console.info('Refresh operation triggered');
__generateChart(graphRoot,'UPDATE');
selection.markSelected();
if(svg){
svg.attr("transform", data.getZoom());
}
}
}
d3.rebind(exports, dispatch, 'on');
return exports;
};
/**
* scomosGraphBehaviours : refactored from scomosGraph to minimize the file size
* Will contain :
* various event handler functions
* d3 behaviours(drag,zoom) and handlers
* All these are re factored from scomosGraph so will be very specific to scomosGraph.
* Note : no need to write seperate test for these as these functions will be tested from scomosGraph_tests.js
*//*
//function mouseDownOnSpecies(d){
function clickOnSpecies(d){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
console.log("specie clicked");
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisSpecies = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisSpecies.classed("selected", true);
//clean up the selection
selection.addNode(thisSpecies);
}
else{
//toggle speciesSelection
thisSpecies.classed('selected',!thisSpecies.classed('selected'));
//add to selection if it is selected
if(thisSpecies.classed('selected'))
selection.addNode(thisSpecies);
else
selection.removeNode(thisSpecies);
}
}
//function mouseDownOnReaction(d){
function clickOnReaction(d){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
console.log("reaction clicked");
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisReaction = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisReaction.classed("selected", true);
selection.addNode(thisReaction);
}
else{
//toggle reactionSelection
thisReaction.classed('selected',!thisReaction.classed('selected'));
//add to selection if it is selected
if(thisReaction.classed('selected'))
selection.addNode(thisReaction);
else
selection.removeNode(thisReaction);
}
//select edges involving this reaction
d3.selectAll('.link').filter(function(thisLink){
var _source = thisLink.source;
var _target = thisLink.target;
var thisID = thisReaction.datum().sId;
return _source.sId === thisID || _target.sId === thisID;
}).classed('selected',thisReaction.classed('selected')); //links follow the state of reaction node
}
function mouseDownOnLink(d){
//function clickOnLink(d){
console.log("link clicked");
//propagate this event one level above so that g element will handle it
//fixes dragging problem
d3.event.stopPropagation();
//if (d3.event.defaultPrevented) return;
var thisLink = d3.select(this);
if(!d3.event.ctrlKey){
//deselect all and select this link
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisLink.classed("selected", true);
selection.addNode(thisLink);
}
else{
//toggle link selection
thisLink.classed('selected',!thisLink.classed('selected'));
//add to selection if it is selected
if(thisLink.classed('selected'))
selection.addNode(thisLink);
else
selection.removeNode(thisLink);
}
}
function mouseDownOnCompartment(d){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
var thisCompartment = d3.select(this);
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisCompartment.classed("selected", true);
selection.addNode(thisCompartment);
}
else{
//toggle speciesSelection
thisCompartment.classed('selected',!thisCompartment.classed('selected'));
//add to selection if it is selected
if(thisLink.classed('selected'))
selection.addNode(thisCompartment);
else
selection.removeNode(thisCompartment);
}
}
function mouseClickedOnSVG(d){
if (d3.event.defaultPrevented) return;
d3.event.stopPropagation();
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
}*/
/**
* This module handles the various model specific selections
* optimizes the selections and keeps track of various selection data
* Module will use selectionSet to keep track of selections internally
*
* Note : This module is not exposed outside directly so for testing
* retrieve the instance from scomos graph module
*/
/**
* creates instance of the scomos selections
* @constructor
*/
function scomosSelections(rootElem)
{
/** selection set to store various d3 selectors **/
var __selections = new scomosSelectionSet();
/** tracks the last selected element **/
var __lastSelected =null;
/** root div on which this graph is drawn **/
//TODO this is bad bad but not seeing any way around this for now
// everytime __grpahRoot is not set graph root ( root svg ) of current element will be
// set as __graphRoot
var __graphRoot = d3.select(rootElem);
/** selection mode **/
var __isMultiSelect = false;
var _OH = objectHelper;//Weired I know. but cannot use _ as it is used by _ library. could be missleading.
//private helper methods
/**
* sets the last selected element value based on the selection mode
* @param {Object} elem
* @returns sets the lastSelected to this if not multiselect else sets last selecteded to null;
*/
function __setLastSelected(elem){
}
/**
* finds sets the root svg of passed d3 selection
* @param {object} elem
* @returns {object} d3 selection pointing to root svg of this graph
*/
function __setGraphRoot(elem)
{
var thisNode = elem.node();
while(thisNode.nodeName !== 'svg')
thisNode = thisNode.parentElement;
__graphRoot = d3.select(thisNode);
return __graphRoot;
}
/**
* return all the children for passed complex
* @param {object} elem d3 selection of target complex
* @returns array of d3 selection consisting children of this complex
*/
function __getAllChildrenOfComplex(elem){
return (__graphRoot || __setGraphRoot(elem)) //dirty hack but not seeing any way around this
.selectAll('.species-node')
.filter(function(d){
return d.sParentComplex === elem.datum().sId});
}
/**
* returns all the children ( species,complexes,reaction nodes and compartments)
* @param {Object} elem d3 selector pointing to compartment
* @returns {[Object]} array of d3 selector containing all children of this compartment
*/
function __getAllChildrenOfCompartment(elem){
/**
* Select All group elements in the root g
* this gives reference of all the selectable elements i.e. no edges will be selected
*/
//this is temp
return (__graphRoot || __setGraphRoot(elem))
.select('g') //gives the root g
.selectAll('g')//gives all the compartments , species and reactions
.filter(function(d){if(d) return d.sParentCompartment === elem.datum().sId;})
}
/**
* returns list of all edges of this reaction node
*/
function __getEdgesOfReaction(elem){
//links follow the state of reaction node
//var thisReaction = node;
return (__graphRoot || __setGraphRoot(elem)).selectAll('.link')
.filter(function(thisLink){
var _source = thisLink.source;
var _target = thisLink.target;
var thisID = elem.datum().sId;
return _source.sId === thisID || _target.sId === thisID;
});
}
function triggerSelectionEvent(){
var selectionEventData = {};
var _sel = scomosSelections.getCopiableSelection();
var isCopiable = false;
var isDeletable = false;
if(_sel.species.length > 0 || _sel.reactions.length > 0){
isCopiable = true;
}
if(Object.keys(__selections.getAllItems()).length > 0){
isDeletable = true;
}
selectionEventData['isCopiable'] = isCopiable;
selectionEventData['isDeletable'] = isDeletable;
// var showProperties = d3.selectAll('.selected').size() == 1;
// selectionEventData['showProperties'] = showProperties;
// var selectedNode = d3.select('.selected');
// if(showProperties) {
// selectionEventData['selectedNode'] = selectedNode.node();
// selectionEventData['nodeData'] = selectedNode.datum();
// }
//eskinDispatch.selectionEvent({isCopiable:isCopiable,showProperties:showProperties});
//setTimeout(function(){
eskinDispatch.selectionEvent(selectionEventData);
//},10);
}
/** scomos selections object to be return as instance of this object **/
var scomosSelections ={};
// methods to add various model graph nodes to selections
/**
* adds passed species and its children( if complex) to selection
* @param {object} d3 selection object pointing to species node
* @returns
*/
scomosSelections.addSpecies = function addSpecies(elem){
var that = this;
__selections.add(elem);
//make this elem the last selected
__lastSelected = elem;
//if this is the complex species add its child to set
if(elem.datum().sType === 'Complex'){
console.log("adding complex" + elem.datum().sId)
//get all species form this complex and add them to selection
__getAllChildrenOfComplex(elem).each(function(){
//__selections.add(d3.select(this));
that.addNode(d3.select(this))
});
}
}
/**
* adds passed covalent modification to selection
* @param {object} d3 selection object pointing to covalent modification node
* @returns
*/
scomosSelections.addModifier = function addModifier(elem){
var that = this;
__selections.add(elem);
//make this elem the last selected
__lastSelected = elem;
}
/**
* adds passed reaction and its edges to the selection set
* @param {object} d3 selection object pointing to reaction node
* @returns
*/
scomosSelections.addReaction = function addReaction(elem){
__selections.add(elem);
//make this elem the last selected
__lastSelected = elem;
//add reaction edges to the selection
__getEdgesOfReaction(elem).each(function(){__selections.add(d3.select(this))});
}
/**
* adds passed edge to the selection set
* @param {object} d3 selection object pointing to reaction node
* @returns
*/
scomosSelections.addEdge = function addEdge(elem)
{
__selections.add(elem);
//make this elem the last selected
__lastSelected = elem;
}
/**
* adds passed compartment and all its children to the selection
* @parent {object} d3 selection pointing to the compartmetn
* @returns
*/
scomosSelections.addCompartment = function addCompartment(elem){
console.log("adding Compartment "+elem.datum().sId)
var that = this;
//add this compartment to selection
__selections.add(elem);
//make this elem the last selected
__lastSelected = elem;
//add all nodes with thisCompartment as as sParentCompartment
__getAllChildrenOfCompartment(elem)
.each(function(){
var thisElem = d3.select(this);
//__selections.add(d3.select(this))
// successively run addNode method on all childrens of this
console.log("adding child "+thisElem.datum().sId)
//if selection does not have this node preAdded
if(!that.getNode(thisElem.datum().sId))
that.addNode(thisElem);
});
}
/**
* broker method checks element type and calls appropriate function
* @param {object} elem d3 selector pointing to the node to be added to selection
* @returns
*/
scomosSelections.addNode = function addNode(elem){
//check if compartment
if(elem.classed('compartment'))
this.addCompartment(elem);
//check if species
else if(elem.classed('species-node'))
this.addSpecies(elem);
else if(elem.classed('reaction-node'))
this.addReaction(elem);
else if(elem.classed('link'))
this.addEdge(elem);
else if(elem.classed('modifier-node'))
this.addModifier(elem);
else{
//TODO: use logger to log this
console.log("invalid selector passed ");
}
triggerSelectionEvent();
}
/**
* removes the species form selection if it exists
* removal wont happen if species is selected or any of its parent is all ready in selection
* @param {Object} speciesId speciesId to be removed
* @returns {Object} a removed d3 selection
*/
scomosSelections.removeSpecies = function removeSpecies(speciesId){
var thisSpecies = this.getNode(speciesId);
//not found return empty
if(!thisSpecies){
console.log("not valid selector to remove species")
return null;
}
//check if parent of this species are in selected set
var thisData = thisSpecies.datum();
if( (thisData.sParentCompartment && this.getNode(thisData.sParentCompartment)) || (thisData.sParentComplex && this.getNode(thisData.sParentComplex)) )
{
console.log("parent exists not deleteing");
return null;
}
console.log("continuing with species deletion");
var returnThis = __selections.remove(thisSpecies);
//if this is complex remove its unselected children
if(thisSpecies.datum().sType === 'Complex'){
//get all species form this complex and add them to selection
__getAllChildrenOfComplex(thisSpecies).each(function(){
var thisElem = d3.select(this);
//remove if not selected
if(!thisElem.classed('selected'))
__selections.remove(thisElem);
});
}
return returnThis;
}
/**
* removes compartment and all its unselected children from selection
*/
scomosSelections.removeCompartment = function removeCompartment(compartId)
{
console.log("removing compartment "+compartId);
var that = this;
var thisCompartment = this.getNode(compartId);
//not found return empty
if(!thisCompartment)
return null;
var returnThis = __selections.remove(thisCompartment);
console.log("compartment "+compartId +" removed successfully");
//remove all unSelected children
__getAllChildrenOfCompartment(thisCompartment).each(function(){
var thisElem = d3.select(this);
//remove if not selected
if(!thisElem.classed('selected')){
//__selections.remove(thisElem);
//call remove method of each component seperately
console.log("removing "+thisElem.datum().sId);
that.removeNode(thisElem);
}
});
return returnThis;
}
/**
* removes the reaction node and all its edges from the selection
*/
scomosSelections.removeReaction = function removeReaction(reactionId){
var thisReaction = this.getNode(reactionId);
//not found return empty
if(!thisReaction)
return null;
var returnThis = __selections.remove(thisReaction);
//remove all the edges belonging to this node
__getEdgesOfReaction(thisReaction).each(function(){__selections.remove(d3.select(this))});
return returnThis;
}
/**
* a broker method for all remove selection methods
*/
scomosSelections.removeNode = function removeNode(elem){
//remove only if valid node
if(!elem && !elem.datum){
console.log("invalid selector passed ");
return null;
}
var thisData = elem.datum();
//check if compartment
if(elem.classed('compartment'))
this.removeCompartment(thisData.sId);
//check if species
else if(elem.classed('species-node'))
this.removeSpecies(thisData.sId);
else if(elem.classed('reaction-node'))
this.removeReaction(thisData.sId);
else if(elem.classed('link'))
this.removeLink(thisData.sId);
else{
//TODO: use logger to log this
console.log("invalid selector passed ");
}
triggerSelectionEvent();
}
/**
* removes all the selection from this selection
* @param nothing
* @returns cleans up internal selection structure
*/
scomosSelections.clear = function clear(){
//that way old instance will be freed up by the javascript GC
__selections = new scomosSelectionSet();
triggerSelectionEvent();
}
//methods to get selection states and statics( if any)
//methods to get selections
/**
* returns node form current selection based on the needle ( could be a string or an object)
* @param {(string|object)} needle - look for needle or needle.datum().sId
* @returns {object} returns found node from selection otherwise null
*/
scomosSelections.getNode = function getNode(needle){
if(objectHelper.isString(needle))
return __selections.getItem(needle);
//must be object get needle and return
return needle.hasOwnProperty('datum')?__selections.getItem(needle.datum().sId):null;
}
/**
* return last selected node( selected by user click)
* @returns {Object} d3 selection pointing to last selected
*/
scomosSelections.getLastSelectedNode = function getLastSelectedNode(){
return __lastSelected;
}
/**
* returns the draggable selection from current selection
* @returns {[object]} psudeo d3 selector pointing to all dragable elements
*/
scomosSelections.getDraggableSelection = function getDraggableSelection(){
var returnThis = [];
var allSelected = __selections.getAllItems();
for(var item in allSelected){
//remove edges from active selection if any as edges are not draggable
if(allSelected[item].datum().getEntityType() !== 'Edge'){
returnThis.push(allSelected[item]);
}
}
return returnThis;
}
/**
* returns the destructible selection categoriwise
* @return {'compartments':[Compartment],'species':[Species],'reactions':[Reaction],'edges':[Edge]} destructible selection categoriwise
*/
scomosSelections.getDestructableSelection = function(){
var returnThis = {'compartments':[],'species':[],'reactions':[],'edges':[],'modifications':[]};
var dSelection = d3.values(__selections.getAllItems());
dSelection.map(function(node){
var d = node.datum();
var edgesSIds = returnThis.edges.map(function(e){return e.sId});
switch (d.getEntityType()) {
case 'Compartment':
returnThis.compartments.push(d);
break;
case 'Species':
returnThis.species.push(d);
d.getAllEdges().map(function(edge){
if(edgesSIds.indexOf(edge.sId) == -1)
returnThis.edges.push(edge)
});
break;
case 'Reaction':
returnThis.reactions.push(d);
d.getAllEdges().map(function(edge){
if(edgesSIds.indexOf(edge.sId) == -1)
returnThis.edges.push(edge)
});
break;
case 'Edge':
if(edgesSIds.indexOf(d.sId) == -1)
returnThis.edges.push(d);
break;
case 'Modification':
returnThis.modifications.push(d);
break;
default:
__logger.warn('scomosSelections : invalid node type : ' + d.getEntityType() +'in getDestructableSelection');
}
}
);
//update destructible selection by looking at reactions that needs to be deleted by inference
//IMPORTANT : this is soft delete operations to figure out which reactions needs to be removed as there mendatory edges are removed
/**Store edges ids reaction wise **/
var rEdgeGroup = {};
returnThis.edges.forEach(function(edge){
//dont process modifiers
if(edge.role !== 'MODIFIER'){
var rNode = edge.getParentReaction();
if(!rEdgeGroup[rNode.sId])
rEdgeGroup[rNode.sId] = [];
rEdgeGroup[rNode.sId].push(edge);
}
});
console.log(rEdgeGroup);
//for every array in edge group get reference reaction
//get sIds of all mendatory edges verify count and sIds
//if mathched add this reaction to deletion selection
//add all edges(mendatory are allredy added add modifiers) of this reaction to deletion also
d3.values(rEdgeGroup).forEach(function(arrEdges){
var thisReaction = arrEdges[0].getParentReaction();
var arrEdgesSids = arrEdges.map(function(edge){return edge.sId}).sort();
var medatoryEdges = thisReaction.getProductEdges().concat(thisReaction.getReactantEdges());
var mendatoryEdgesSids = medatoryEdges.map(function(edge){return edge.sId}).sort();
if(objectHelper.compareStringArray.call(arrEdgesSids,mendatoryEdgesSids)){
console.log(thisReaction);
var reactionsIds = returnThis.reactions.map(function(r){return r.sId});
if(reactionsIds.indexOf(thisReaction.sId) == -1){
returnThis.reactions.push(thisReaction);
}
var edgesSIds = returnThis.edges.map(function(e){return e.sId});
thisReaction.getAllEdges().map(function(edge){
if(edgesSIds.indexOf(edge.sId) == -1) returnThis.edges.push(edge)
});
}
else {
console.log('Reaction not affected '+thisReaction.sId);
}
})
return returnThis;
}
/**
* returns the copiable seleciton
* @return {{species:[Speceis],reactions:[Reaction]}} returns copiable seleciton, usable by clipboard module.
*/
scomosSelections.getCopiableSelection = function(){
var returnThis = {'species':[],'reactions':[]};
//get all nodes
//copy all species
//copy all reactions
//copy all reaction species.
var dSelection = d3.values(__selections.getAllItems());
dSelection.map(function(node){
var d = node.datum();
if(!d) {console.warn(d); return;}
switch (d.getEntityType()) {
case 'Species':
if(!objectHelper.isNodeInArray(returnThis.species,d.sId))
returnThis.species.push(_OH.deepCopyNodeObject(d));
break;
case 'Reaction':
if(!objectHelper.isNodeInArray(returnThis.reactions,d.sId)){
returnThis.reactions.push(_OH.deepCopyNodeObject(d));
d.getAllconnectedSpecies().map(function(species){
if(!objectHelper.isNodeInArray(returnThis.species,species.sId)){
returnThis.species.push(_OH.deepCopyNodeObject(species));
}
});
}
break;
default:
//no need to do anything here. just ignore invalid nodes.
}
});
return returnThis;
}
/**
* updates dragable selections parent child property
* TODO: is this the right place for thsi function
* @param {object} object of modeldata
* @returns updates dragable selection
*/
scomosSelections.updateDraggableSelection = function updateDraggableSelection(__modelDataApi){
/*
* Algo :
* Step 1: construct update selection
* if parent of this not in selection add to updatable selection
* setp 2: update nodes in updatable selection
*/
var modelData = __modelDataApi || __modelDataApi.getModelData();
var updateThis = [];
var allItems = __selections.getAllItems();
console.log(allItems);
var validateAll = false;
for(var sId in allItems){
//console.log(this.getNode(d3.select(allItems[sId]).datum()));
var thisNode = allItems[sId];
var thisNodeData = allItems[sId].datum();
try{
if(thisNodeData.sParentCompartment && !this.getNode(thisNodeData.sParentCompartment)){
updateThis.push(thisNode);
if(thisNode.classed('compartment'))
validateAll = true;
}
}
catch(err) {
console.log("failed to add "+thisNode.sId + " to selection");
}
}
//add all compartment whose parent is not selected
if(validateAll){
var that = this;
__graphRoot.selectAll('.compartment').filter(function(d){
if(d.sParentCompartment && !that.getNode(d.sParentCompartment))
updateThis.push(d3.select(this));
});
//add all species whose paernt is not in selected
__graphRoot.selectAll('.species-node').filter(function(d){
if( (d.sParentCompartment && !that.getNode(d.sParentCompartment)) ||( d.sParentComplex && !that.getNode(d.sParentComplex)))
updateThis.push(d3.select(this));
})
//add all reactions whose parent is not in selected
__graphRoot.selectAll('.reaction-node').filter(function(d){
if(d.sParentCompartment &&!that.getNode(d.sParentCompartment))
updateThis.push(d3.select(this));
})
}
//run following only if update selectin contains the compartment
var flagUpdateAll = false;
updateThis.forEach(function(thisNode){
//call updater based on type
//TODO: refactor to one broker method
try{
var thisData = thisNode.datum();
//check if compartment
if(thisNode.classed('compartment')){
modelValidator.updateComptParents(modelData.mapCompartmentLayouts,thisData);
flagUpdateAll = true;
}
//check if species
else if(thisNode.classed('species-node'))
modelValidator.updateSpeciesParents(modelData.mapCompartmentLayouts,modelData.mapSpeciesLayouts,thisData);
else if(thisNode.classed('reaction-node'))
modelValidator.updateReactionParents(modelData.mapCompartmentLayouts,thisData);
else if(thisNode.classed('link'))
console.log("Not updating edges");//do nothing
else{
//TODO: use logger to log this
console.log("invalid selector passed ");
}
}
catch(err){
console.log("failed parent update on "+thisData.sId + err)
}
});
//if (flagUpdateAll){ __modelDataApi.updateAllParents(true);}
}
/**
* added to support select refresh mode
*/
scomosSelections.markSelected = function(){
var allSelected = __selections.getAllItems();
for(var prop in allSelected){
if(allSelected.hasOwnProperty(prop)){
try {
var selected = allSelected[prop]
if (!selected.classed('selected')){
break;
}
var selData= selected.datum();
//find this in current canvas and mark it selected
var thisClass = selected.attr('class').split(' ')[0];
d3.selectAll('.'+thisClass)
.filter(function(d){
return d.sId === selData.sId;
})
.classed('selected',true);
}
catch (e){
console.log("error while applying selection"+e.message);
}
}
}
//now clear the selection and add selected to set again
__selections.clear();//clear the selection
var that = this;
d3.selectAll('.selected').each(function(){
var thisNode = d3.select(this);
//add this to this to newly formed selection set
that.addNode(thisNode);
})
}
/**
* returns the visually selected items.
* @return {D3 selection} selection with all vusally selected nodes.
*/
scomosSelections.getSelectedNodes = function(){
return __graphRoot.selectAll('.selected');//TODO: fix it. Shuld return from selection set.
}
/** return scomosSelections object **/
return scomosSelections;
}
/**
* Behaviours.js contains d3 event handler for various events like click drag etc
* to enable there events to access more data about view use the anon wrapped function call
* syntax to define event handler is
* function func_name ( element,data1,data2....)
* when calling useing
* d3.select("node").on("click",function(){ func_name(this,data1)});
*/
var eskinBehaviours = {};
eskinBehaviours.mouseMoveOnCanvas = function(element,construnctionG,construction){
//<line x1="0" y1="0" x2="200" y2="200" style="stroke:rgb(255,0,0);stroke-width:2" />
if(construction.isConstructingEdge()){
construnctionG.attr('visibility','visible');
var sourceNode = construction.getReactionConstructor().source;
var x1 = sourceNode.position.iX + sourceNode.iWidth / 2;
var y1 = sourceNode.position.iY + sourceNode.iHeight / 2;
var mouseCoords = modelHelper.getTransformedCordinates(element,d3.event);
construnctionG.select('line')
.attr('x1',x1)
.attr('y1',y1)
.attr('x2',mouseCoords.iX)
.attr('y2',mouseCoords.iY);
}
else{
construnctionG.attr('visibility','hidden');
}
}
/**
* hanlder for context i.e. right click handler for canvas.
* @param {D3 element} element reference to canvas.
* @param {Construnctio} construnction instanceOf active construnction object.
* @return {} handles context behaviour for canvas.
*/
eskinBehaviours.contextOnCanvas = function(element,construction){
if(construction.isConstructingEdge()){
d3.event.preventDefault();
construction.stopCurrentOperation();
}
}
eskinBehaviours.getCanvasContextMenu = function(contextHandler){
var canvasContextMenu = [
{
title: 'paste',
action: function(elm, d, i) {
contextHandler.paste();
console.warn('Copied element.');
},
disabled : !clipboard.hasPastables()
}]
return canvasContextMenu;
}
eskinBehaviours.getCompartmentContextMenu = function(data,contextHandler){
var compartmentContextMenu = [
{
title: 'Copy',
action: function(elm, d, i) {
contextHandler.copy();
console.warn('Copied element.');
}
},
{
title: 'Paste',
action: function(elm, d, i) {
contextHandler.paste();
console.warn('Pasted elements');
console.warn(d3.event);
},
disabled : !clipboard.hasPastables()
},
{
title: 'Cut',
action: function(elm, d, i) {
contextHandler.cut();
console.warn('Elements been Cut');
}
},
{
title: 'Delete',
action: function(elm, d, i) {
contextHandler.delete();
console.warn('Elements been Deleted.');
}
}
]
return compartmentContextMenu;
}
eskinBehaviours.getSpeciesContextMenu = function(data,contextHandler){
var speceisContextMenu = [
{
title: 'Copy',
action: function(elm, d, i) {
contextHandler.copy();
console.warn('Copied element.');
}
},
{
title: 'Paste',
action: function(elm, d, i) {
contextHandler.paste();
console.warn('Pasted elements');
console.warn(d3.event);
},
disabled : data.sType.toUpperCase() !== 'COMPLEX' || (!clipboard.hasPastables())
},
{
title: 'Cut',
action: function(elm, d, i) {
contextHandler.cut();
console.warn('Elements been Cut');
}
},
{
title: 'Delete',
action: function(elm, d, i) {
contextHandler.delete();
console.warn('Elements been Deleted.');
}
}
]
return speceisContextMenu;
}
eskinBehaviours.getReactionContextMenu = function(data,contextHandler){
var reactionContextMenu = [
{
title: 'Copy',
action: function(elm, d, i) {
contextHandler.copy();
console.warn('Copied element.');
}
},
{
title: 'Cut',
action: function(elm, d, i) {
contextHandler.cut();
console.warn('Elements been Cut');
}
},
{
title: 'Delete',
action: function(elm, d, i) {
contextHandler.delete();
console.warn('Elements been Deleted.');
}
}
]
return reactionContextMenu;
}
eskinBehaviours.getCovalentContextMenu = function(data,contextHandler){
var covalentContextMenu = [
{
title: 'Delete',
action: function(elm, d, i) {
contextHandler.delete();
console.warn('Elements been Deleted.');
}
}
]
return covalentContextMenu;
}
eskinBehaviours.mouseClickedOnSpecies = function(element,selection,construction,panMode){
if(panMode === 'PAN'){
//dont block the event let zoom behaviour handle this
return;
}
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisSpecies = d3.select(element);
var thisData = thisSpecies.datum();
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisSpecies.classed("selected", true);
//clean up the selection
selection.addNode(thisSpecies);
}
else{
//toggle speciesSelection
thisSpecies.classed('selected',!thisSpecies.classed('selected'));
//add to selection if it is selected
if(thisSpecies.classed('selected'))
selection.addNode(thisSpecies);
else
selection.removeNode(thisSpecies);
}
//add resizer to this node
if(d3.selectAll('.selected')[0].length == 1)
resizer.addResizer(d3.select('.selected'));//new selection is required as this click could be deselection event
else
resizer.clearResizer();
eskinDispatch.speciesClick(thisData,element);
construction.constructNode(d3.event);
}
eskinBehaviours.mouseClickedOnReaction = function(element,selection,construction,panMode){
if(panMode === 'PAN'){
//dont block the event let zoom behaviour handle this
return;
}
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisReaction = d3.select(element);
var thisData = thisReaction.datum();
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisReaction.classed("selected", true);
selection.addNode(thisReaction);
}
else{
//toggle reactionSelection
thisReaction.classed('selected',!thisReaction.classed('selected'));
//add to selection if it is selected
if(thisReaction.classed('selected'))
selection.addNode(thisReaction);
else
selection.removeNode(thisReaction);
}
//mark all its edges selected if this reaction is selected
if(thisReaction.classed("selected")){
thisData.getAllEdges().forEach(function(edge){
//var eData= edge.datum();
var thisEdge = d3.selectAll(".link")
.filter(function(d){
return d.sId === edge.sId
});
thisEdge.classed('selected',true);
})
}
//select edges involving this reaction
// d3.selectAll('.link').filter(function(thisLink){
// var _source = thisLink.source;
// var _target = thisLink.target;
// var thisID = thisReaction.datum().sId;
// return _source.sId === thisID || _target.sId === thisID;
// }).classed('selected',thisReaction.classed('selected')); //links follow the state of reaction node
// //dispatch click event for user defined hadlers
construction.constructNode(d3.event);
resizer.clearResizer();
eskinDispatch.reactionClick(thisData,element);
}
eskinBehaviours.mouseClickedOnCompartment = function(element,selection,panMode){
if(panMode === 'PAN'){
//dont block the event let zoom behaviour handle this
return;
}
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
//propagate this event one level above so that g element will handle it
//fixes dragging problem
//d3.event.stopPropagation();
var thisCompartment = d3.select(element);
var thisData = thisCompartment.datum();
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisCompartment.classed("selected", true);
//clean up the selection
selection.addNode(thisCompartment);
resizer.addResizer(thisCompartment)
}
else{
//toggle speciesSelection
thisCompartment.classed('selected',!thisCompartment.classed('selected'));
//add to selection if it is selected
if(thisCompartment.classed('selected'))
selection.addNode(thisCompartment);
else
selection.removeNode(thisCompartment);
}
//selection.updateDraggableSelection(data);
//selection.updateDraggableSelection(data);
eskinDispatch.compartmentClick(thisData,element);
}
eskinBehaviours.mouseClickedOnEdge = function (element,selection,panMode){
if(panMode === 'PAN'){
//dont block the event let zoom behaviour handle this
return;
}
d3.event.stopPropagation();
var thisLink = d3.select(element);
var thisData = thisLink.datum();
if(!d3.event.ctrlKey){
//deselect all and select this link
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisLink.classed("selected", true);
selection.addNode(thisLink);
}
else{
//toggle link selection
thisLink.classed('selected',!thisLink.classed('selected'));
//add to selection if it is selected
if(thisLink.classed('selected'))
selection.addNode(thisLink);
else
selection.removeNode(thisLink);
}
eskinDispatch.linkClick(thisData,element);
}
eskinBehaviours.clickOnCovalentModification = function(element,selection){
d3.event.stopPropagation();
if (d3.event.defaultPrevented) return;
var thisModification = element;
var thisData = thisModification.datum();
if(!d3.event.ctrlKey){
d3.selectAll('.selected').classed("selected", false);
//clean up the selection
selection.clear();
thisModification.classed("selected", true);
//clean up the selection
selection.addNode(thisModification,element);
}
else{
//toggle speciesSelection
thisModification.classed('selected',!thisModification.classed('selected'));
//add to selection if it is selected
if(thisModification.classed('selected'))
selection.addNode(thisModification);
else
selection.removeNode(thisModification);
}
resizer.clearResizer();
eskinDispatch.covalentModificationClick(thisData)
}
/**
* clears the selection from view and selections
* @param {D3 selected elem (canvas)} element d3 selection fro canvases
* @param {scomosSelections} selection selections Object
* @param {string} __panMode pan mode decides wheather to clear the selections
* @return {} [description].
*/
eskinBehaviours.mouseClickedOnCanvas = function(element,selection,model,__panMode,construction){
//if (d3.event.defaultPrevented) return;
if(__panMode.toUpperCase() === "PAN"){
return;
}
if(__panMode.toUpperCase() === "SELECT"){
selection.clear();
d3.selectAll('.selected').classed('selected',false);
resizer.clearResizer();
}
if(construction.getDetails().activeTool){
construction.constructNode(d3.event);
}
else{
var defCompart = model.mapCompartmentLayouts['default'];
var eventData = {
sId : model.sId,
sName : model.sName,
sOrganismType : model.sOrganismType,
sNotes : model.sNotes,
iHeight : defCompart.iHeight,
iWidth : defCompart.iWidth,
getEntityType :function(){return 'SBMLModel'},
}
eskinDispatch.canvasClick(eventData);
}
}
/** used as synch var between various drag handlers. It is anti pattern
not able to find way around this **/
var isDragged = false;
var resizeStatus = {isResizing:false,activeResizeHandle:'',node:null,event:null};
/**
* will record before drag dimensions of object.
* Structure shall look something like {sId:{iHeight:Number,iWidth:Number,position:{iX:Number,iY:Number}}}
*/
var beforeDragState;
eskinBehaviours.dragstarted = function(element,selection,panMode){
if(panMode === 'PAN'){
//dont block the event let zoom behaviour handle this
return;
}
d3.event.sourceEvent.stopPropagation();
//treat drag started as the mouseDown event
//do only selection logic in drag started no drag logic here
//leave that to dragged method
var thisNode = element;
var target = d3.event.sourceEvent.target;
target = d3.select(target);
resizeStatus.isResizing = false;
if(target.classed('resizer')){
resizeStatus.isResizing = true;//this flag will be used by the dragging handlers to decide drag or resize
resizeStatus.activeResizeHandle = target.attr('class').split(' ')[1];//TODO: remvoe hard coded index
resizeStatus.node = thisNode;
}
//ignore ctrl press in drag started
if(!d3.event.sourceEvent.ctrlKey || resizeStatus.isResizing){
//deselect all if this is not selected one
//if selected this could be the case of the drag
//so let dragged or clicked event handle further state
if(!thisNode.classed('selected')){
d3.selectAll('.selected').classed('selected',false);
//clean up the selection
selection.clear();
}
modelHelper.selectNode(thisNode);
selection.addNode(thisNode);
}
}
/**
* dragged event handlers is invoked on actual drag
* @param {D3 selector} element d3 selector that is being dragged
* @param {scomosSelections} selection current selections set
* @param {SBMLModel} modelData model
* @param {Function} viewUpdate viewUpdater Function
* @return {} handles drag and resize, updates the view accordingly
*/
eskinBehaviours.dragged = function(element,selection,modelData,viewUpdate,panMode){
//process drag only if true drag
if(panMode === 'PAN'){
//dont process this.
return;
}
var thisNode = element;
if(d3.event.dx != 0 || d3.event.dy != 0)
{
isDragged = true;
var target = d3.event.sourceEvent.target;
target = d3.select(target);
if(resizeStatus.isResizing){
resizeStatus.event = d3.event;
if(!beforeDragState){
beforeDragState = recordSelectionDimensions(selection);
}
resizer.processResize(resizeStatus);
viewUpdate();
}else{
resizer.clearResizer();
if(d3.event.sourceEvent.ctrlKey){
//mark this as selected
modelHelper.selectNode(thisNode);
selection.addNode(thisNode);
}
if(!beforeDragState){
beforeDragState = recordSelectionDimensions(selection);
}
var dragables = selection.getDraggableSelection(modelData);
dragables.forEach(function(thisNode){
var node = d3.select(thisNode[0][0]);
//drag if neither an edge nor a covalent modification
if(!node.classed('link') && !node.classed('modifier-node')){
//console.info(node.attr('class'));
node.classed('dragging',true);
}
});
//console.info(d3.selectAll('.dragging'));
d3.selectAll('.dragging').each(function(d){
d.position.iX = d3.event.dx + d.position.iX;
d.position.iY = d3.event.dy + d.position.iY;
d3.select(this).attr("transform", "translate(" + d.position.iX + "," + d.position.iY + ")")
})
//update affecting links
d3.selectAll('.link').attr('d', function(d){return shapeUtil.getPathCoordsForLine(d.source, d.target, d.role)});
}
}
}
eskinBehaviours.dragended = function(element,selection,modelData,undoManager){
//d3.event.sourceEvent.stopPropagation();
if(isDragged){
isDragged=false;
console.log("drag ended");
//do not handle any selection logic in drag end only dragging logic
d3.selectAll(".dragging").classed("dragging", false);
//update parent child relationShip of dragged elements
//selection.updateDraggableSelection(modelData);
var afterDragState = recordSelectionDimensions(selection);
undoableOperations.recordDrag(undoManager,modelData,beforeDragState,afterDragState);
beforeDragState = null;
modelData.refreshNodeRelations();
//if selection count is one add resizers back
if (d3.selectAll('.selected')[0].length == 1){
resizer.addResizer(element);
modelHelper.triggerClickOnNode(d3.select('.selected'));
}
}
}
eskinBehaviours.zoom = function(__panMode,rootG,selection,zoomBehaviour){
//zoomBehaviour.translate([d3.event.sourceEvent.x, d3.event.sourceEvent.y]);//reset translate if any
//blcok if true zoom
if(d3.event.translate || d3.event.scale){
if(!d3.event.sourceEvent)//not a d3 event dont handle.
return;
d3.event.sourceEvent.stopPropagation();
console.log("zooming")
var zoomElem = rootG;
if(__panMode.toUpperCase() === "PAN"){
zoomElem.attr("transform", "translate(" + d3.event.translate + ")scale(" + d3.event.scale + ")");
}
if(__panMode.toUpperCase() === "SELECT"){
if(event.ctrlKey){
zoomElem.attr("transform", "translate(" + d3.event.translate + ")scale(" + d3.event.scale + ")");
}
else{
var transFactor = shapeUtil.getScaleAndTransformFromString(rootG.attr('transform'));
//nullify any zoom or translate
zoomBehaviour.translate(transFactor.translate);
zoomBehaviour.scale(transFactor.scale);
}
}
}
}
eskinBehaviours.keyPresseed = function(rootSVG,selection){
d3.select('body').on("keydown", function() {
d3.event.stopPropagation();
if(d3.event.keyCode==65 && d3.event.ctrlKey){
d3.selectAll('.species-node').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
d3.selectAll('.reaction-node').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
d3.selectAll('.link').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
d3.selectAll('.compartment').each(function(){
var thisNode = d3.select(this);
thisNode.classed('selected', true);
selection.addNode(thisNode);
});
}
else if (d3.event.keyCode == 46) { //46 is key code for delete
d3.event.stopPropagation();
}
});
}
function handleResize(event){
var thisNode = resizeStatus.node;
var thisData = thisNode.datum();
var aspectRatio = thisData.iWidth / thisData.iHeight;
if(resizeStatus.activeResizeHandle === 'rNE'){
//rule width follows height
thisData.iHeight -= event.dy;
thisData.iWidth = thisData.iHeight * aspectRatio;
//thisData.position.iX += event.dx;
thisData.position.iY += event.dy;
}
else if(resizeStatus.activeResizeHandle === 'rSE'){
//rule width follows height
thisData.iHeight += event.dy;
thisData.iWidth = thisData.iHeight * aspectRatio;
//thisData.position.iX += event.dx;
//thisData.position.iY += event.dy;
}
else if(resizeStatus.activeResizeHandle === 'rSW'){
//rule width follows height
var oldWidth = thisData.iWidth;
thisData.iHeight += event.dy;
thisData.iWidth = thisData.iHeight * aspectRatio;
thisData.position.iX += oldWidth - thisData.iWidth;
//thisData.position.iY += event.dy;
}
else if(resizeStatus.activeResizeHandle === 'rNW'){
//rule width follows height
var oldWidth = thisData.iWidth;
thisData.iHeight -= event.dy;
thisData.iWidth = thisData.iHeight * aspectRatio;
thisData.position.iX -= thisData.iWidth - oldWidth;
thisData.position.iY += event.dy;
}
modelHelper.updateNodeView(thisNode)
resizer.updateResizer(thisNode);
//update affecting links
d3.selectAll('.link').attr('d', function(d){return shapeUtil.getPathCoordsForLine(d.source, d.target, d.role)});
}
/**
* returns data in the usable format for drag method to record drag event.
* @param {scomosSelections} selection a scomos seleciton object
* @return {{sId:{iHeight:Number,iWidth:Number,position:{iX:Number,iY:Number}}}} [description]
*/
function recordSelectionDimensions(selection){
var returnThis = {};
selection.getDraggableSelection()
.map(function(node){
var thisData = node.datum();
returnThis[thisData.sId] = {iHeight:thisData.iHeight,
iWidth:thisData.iWidth,
position:{iX:thisData.position.iX,iY:thisData.position.iY}}
})
return returnThis;
}
/**
* this file holds the common code snippets
* some declarations etc that needs to be shared across files
* and can be shared without breaking the design
**/
var eskinDispatch = d3.dispatch('speciesHover','speciesClick',
'reactionHover','reactionClick',
'linkHover','linkClick',
'compartmentHover','compartmentClick','canvasClick',
'covalentModificationClick','toolStateChanged',
'undoManagerEvent','constructionError','clipbaordEvent','selectionEvent',
'nodeDeleted','rendered');
var ed = d3.dispatch('speciesHover','speciesClick',
'reactionHover','reactionClick',
'linkHover','linkClick',
'compartmentHover','compartmentClick',
'covalentModificationClick');
/**
* Re-factored from scomosGraph.js.
* eskin model will follow following flow in general
* all rendering should result from the construct operation making sure various operation will
* follow the same path. This also makes it quite easier to validate data and manage model data
* errors in more efficient manner.
* TODO: Add design document specifying assumed design strategy and assumptions for eskin model.
*/
/**
* Create the d3 force graph for eskin data model.
* graph created is very strictly bound to the JSON data model of
* the eskin sbml format
* @constructor
* @param {String} injectInto div to draw model into
* @param {Object} eskinConfig config object to set def property for this model
*/
d3scomos.eskinModel = function eskinModel (injectInto,eskinConfig){
/** module private variables **/
var injectedInto;
if(injectInto instanceof d3.selection){
injectedInto = injectInto[0][0];//defaults to div with id eskinModel
}
else{
injectedInto = injectInto || "#eskinModel";//defaults to div with id eskinModel
injectedInto = "#"+injectInto;
}
//var modelData = new ModelDataApi();
var eskinOps;
/** initialize private variables **/
// if(injectInto)
// injectedInto = "#"+injectInto;
/** default eSkinConfig **/
var _defEskinConfig = {
height : "500px",
width : "100%",
autoFit : true
}
//augment property on passed config with default config object
if(eskinConfig){
for( var prop in eskinConfig){
if(eskinConfig.hasOwnProperty(prop))
_defEskinConfig[prop] = eskinConfig[prop];
}
}
//set def as new eskinConfig
eskinConfig = _defEskinConfig;
eskinOps = new eskinOperations(injectedInto,eskinConfig);
var returnThis = {
injectedInto : function getInjectedInto(){return injectedInto.slice(1)/** remove the # from tag**/},
operations : eskinOps,
config : eskinConfig,
/**
* Accepts the Model JSON and generates the model object structure and renders it
* @param {JSON} modelDataJson
* @throws {ValidationError} if non optional params are missing for SBMLModel
*/
generate : function generate(modelDataJson){
var startedAt = new Date();
if(modelDataJson.constructor.name === 'SBMLModel'){}
//add this to this modeldata
//modelData.setData(modelDataJson || {});
//draw the chart
eskinOps.initModel(modelDataJson);
//add compartment
try{
eskinOps.addCompartment(modelDataJson.mapCompartmentLayouts['default']); }
catch (err) {
//if(err instanceof ValidationError){
__logger.error("generate addCompartment : validation failed for default compartment"+err.message);
//}
}
d3.values(modelDataJson.mapCompartmentLayouts)
.map(function(compartment){
//TODO Objects may throw errors here for now log them
//Later there will be notification service to group msgs
try{
if(compartment.sId !== 'default')
eskinOps.addCompartment(compartment);
}
catch (err) {
//if(err instanceof ValidationError){
__logger.error("generate addCompartment : validation failed "+err.message);
//}
}
});
//add species
//add complex Species first
d3.values(modelDataJson.mapSpeciesLayouts)
.filter(function(d){return d.sType === "Complex"})
.map(function(species){
try{
eskinOps.addSpecies(species);
}
catch (err) {
//if(err instanceof ValidationError){
__logger.error("generate addCompartment : validation failed "+err.message);
//}
}
});
//add non complex species later
d3.values(modelDataJson.mapSpeciesLayouts)
.filter(function(d){return d.sType !== "Complex"})
.map(function(species){
try{
eskinOps.addSpecies(species);
}
catch (err) {
//if(err instanceof ValidationError){
__logger.error("generate addCompartment : validation failed "+err.message);
//}
}
});
//add reaction
d3.values(modelDataJson.mapReactionLayouts)
.map(function(reaction){
//TODO Objects may throw errors here for now log them
//Later there will be notification service to group msgs
try{
eskinOps.addReaction(reaction);
}
catch (err) {
//if(err instanceof ValidationError){
__logger.error("generate addReaction : validation failed "+err.message);
//}
}
});
//eskinOps.getModel().updateModelBoundaries();
//clear undoManager
eskinOps.undoManager.clear();
eskinOps.fitToScreen();
var finishedAt = new Date();
//$('body').removeClass('waiting');
//rendering done inform outer listners
eskinDispatch.rendered();
console.info('Graph drawn in '+ (finishedAt - startedAt)/1000 + ' seconds.');
},
/**
* sets the zoom mode for view
* @param {[type]} __mode [description]
* @return {[type]} [description]
*/
setPanMode:function(__mode){
eskinOps.setViewMode(__mode);
},
/**
* refresh the curretn model
* @return {[type]} [description]
*/
refresh:function(){
eskinOps.refreshView();
},
/**
* accepts GEOData from external (outside library sources) adds to SBMLModel via operations
* @param {GEOData} GEOData [description]
* @return {[type]} [description]
* @throws {customErrors.ValidationError}
*/
loadGEOData:function(GEOData){
eskinOps.loadGEOData(GEOData);
}
}
//eskinModel.Constructor.prototype = new EventEmitter2();
d3.rebind(returnThis, eskinDispatch, 'on');
return returnThis;
}
/**
* eskinView module : Canvas Drawing and manipulation goes here
* this is private module wont be exposed outside the library
*/
/**
* Creates eskinView object
* @constructor
* @param {String} rootElem rootDiv( fully qulified jquery selector) in which this model will be rendered
*/
function eskinView(rootElem,config,model,undoManager,construction,contextHandler){
var selection = new scomosSelections(rootElem);
var svg;
var rootG;//first level root elem
var compartG;
var construnctionG;
var edgesG;
var speciesG;
var reactionG;
var toolTip;
var panMode = "PAN";
var overlayMode = false;
// following variables are for internal purposes
// they help implement the general update pattern
// for more information on said pattern checkout mike bostokcs blog
// http://bl.ocks.org/mbostock/3808234
var arrSpecies = [];
var arrCompartments = [];
var arrReactions = [];
var links = [];
/**
* function updates the private nodeArray selection
* @param {[nodeObject]} parentNodeArray
* @param {nodeObject} nodeObject node to be added/updateNodeArray
* @returns updates the nodeArray
**/
function updateNodeArray(parentNodeArray,newElem){
var found = $.grep(parentNodeArray,function(elem,i){return elem.sId === newElem.sId})[0];
if(!found) parentNodeArray.push(newElem);//add new
else found = newElem;//update
}
/**
* splice the node from said array if found
* @param {[SBML object]} parentNodeArray node array to be spliced from
* @param {String} elemId sId of elem to be spliced
* @return {SBML object} returns the spliced sbml object
*/
function spliceNodefromNodeArray(parentNodeArray,elemId){
var foundAt;
var found = $.grep(parentNodeArray,function(elem,i){foundAt = i;return elem.sId === elemId})[0];
//found at is index so valid if greater that 0 fix for issue 20819 : last drawn molecule reappers.
if(foundAt >=0 ){
return parentNodeArray.splice(foundAt,1)[0];
}
return null;
}
var force=d3.layout.force()
.size([200,200])
.nodes([])
.links(links);
var drag = d3.behavior.drag()
.origin(function() {
var d = d3.select(this).datum();
return {x: d.position.iPostionX, y: d.position.iPostionY};
})
// .origin(function(d) {
// return {x:d.position.iX,y:d.position.iY}; })
.on("dragstart", function(){eskinBehaviours.dragstarted(d3.select(this),selection,panMode)})
.on("drag", function(){eskinBehaviours.dragged(d3.select(this),selection,model,update,panMode)})
.on("dragend", function(){eskinBehaviours.dragended(d3.select(this),selection,model,undoManager)});
var zoomBehaviour = d3.behavior.zoom().
scaleExtent([0.5, 10])
.on("zoom", function(){eskinBehaviours.zoom(panMode,rootG,selection,zoomBehaviour);});
/**
* initialises the tooltip functionality for this graph.
* @return {} clears any remenant toolTips and inits the toolTip variable.
*/
function initToolTip(){
d3.selectAll('.eskin-toolTip').remove();//remove any tip if exists.
toolTip = d3.tip()
.attr('class', 'eskin-toolTip')
.html(function(d) { return toolTipFormatter(d)})
.offset([0, 0]);
}
/**
* accepts node data and returns the toolTip html
* @param {SBML Node} d node data to be displayed in tooltip
* @return {String} html to be displayed in tip container.
*/
function toolTipFormatter(d){
return '<span> ID : ' + d.sId + '</span>' + '<br> ' +
'<span> Name : ' + d.sName + '</span>' + '<br> '+
'<span> Type : ' + d.sType + '</span>' + '<br> '
}
function initCanvas(){
//Skeleton looks like
/**
* graphRoot -- >SVG (def attrib)
* --> <g root g ( receives pan events)>
* --> <g compartments>
* --> <g links>
* --> <g species>
* --> <g reaction>
*/
//add svg to the root elem and set dimension
d3.select(rootElem).select("svg").remove();
var thisSVG = d3.select(rootElem)
.append("svg")
.attr("height",config.height)
.attr("width",config.width)
.attr("style","padding:10px;");
svg = thisSVG;
//add shape gradients
shapeUtil.initGradients(rootElem);
//init group containers
rootG = svg.append("g").attr("id","rootG");
compartG = rootG.append("g").attr("id","compartG");
construnctionG = rootG.append("g").attr('id',"construnctionG")
.attr('visibility','hidden');
edgesG = rootG.append("g").attr("id","edgesG");
speciesG = rootG.append("g").attr("id","speciesG");
reactionG = rootG.append("g").attr("id","reactionG");
svg.call(zoomBehaviour);
svg.on('click',function(){eskinBehaviours.mouseClickedOnCanvas(this,selection,model,panMode,construction)});
svg.on('mousemove',function(){eskinBehaviours.mouseMoveOnCanvas(this,construnctionG,construction)});
svg.on('contextmenu',function(){
eskinBehaviours.contextOnCanvas(this,construction);
d3.contextMenu(function(){return eskinBehaviours.getCanvasContextMenu(contextHandler);})(event);
});
//svg.on('contextmenu',d3.contextMenu(function(){return eskinBehaviours.getCanvasContextMenu(contextHandler);}));
//some extra config
construnctionG.append('line').attr('id','constrLine')
.attr('class','constrLine');
//setup toolTip functionality
initToolTip();
svg.call(toolTip)
}
initCanvas();
/**
* adds compartment to view
*/
function addCompartment(compartment){
/*compartG.data(compartment)
.enter();*/
var compartment_node = compartG.selectAll('.compartment')
.data(arrCompartments,function(d){return d.sId})
.enter()
.append('g')
.attr('class',function(d){return d.sId !== 'default' ? 'compartment' : 'defCompartment'});
//add shape-path
compartment_node.append('path')
.attr('class', 'compartment-path')
.attr('d',function(d){
if(d.sType == "Rectangular"){
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}else if(d.sType == "Circular"){
return shapeUtil.getEllipseWithTickness(d.iHeight, d.iWidth,10);
}else{
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}
})
.attr('style',function(d){
//dont show default compartment
if(d.sId === 'default') return;
return 'fill:'+'rgb('+d.color.iRed+','+d.color.iGreen+','+d.color.iBlue+')';
});
// add text-node
compartment_node.append('text')
.attr('text-anchor','start')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return 0;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
//move compartment node to its corrrection position
compartment_node.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
//TODO: add event handlers here
compartment_node.on('click',function(){
eskinBehaviours.mouseClickedOnCompartment(this,selection,panMode);
});//there is no special click event handler here
// compartments.on('mouseover', dispatch.compartmentHover);
compartment_node.on('mouseout', toolTip.hide)
compartment_node.on('mouseover', function(d) {
var node = d3.select(this).node();
toolTip.show(d, node);
});
compartment_node.on('contextmenu',d3.contextMenu(
function(data){
return eskinBehaviours.getCompartmentContextMenu(data,contextHandler)
})
);
//add drag
compartment_node.call(drag);
//console.info("added a compartment node : "+compartment.sId+" to canvas ");
}
/**
* adds species to graph binds events etc
* @param {Species} species speceis object to be added to view
* @returns {} adds svg element for this species to view bootstraps its behavior
*/
function addSpecies(species){
// var node = speciesG.selectAll('.species-node')
// .data(arrSpecies,function(d){return d.sId})
// .exit().each(function(d){console.warn('removed : ' + d.sId);}).remove();
var node = speciesG.selectAll('.species-node')
.data(arrSpecies,function(d){return d.sId})
.enter()
.append('g')
.attr('class','species-node');
//add shape
node.append('path')
.attr('d',function(d){
return d3scomos.getSymbol(d.sType,d);
})
.attr('class', 'species-path')
.attr('fill',function(d){ if(d.sType.toUpperCase() === 'COMPLEX') return 'url(#complexFill)'; return 'url(#speciesLinear)';});
//add text
node.append('text')
.attr('text-anchor','middle')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return d.iWidth/2;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
//transform these nodes there right posistions
node.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
node.on('click', function(){
eskinBehaviours.mouseClickedOnSpecies(this,selection,construction,panMode);
});
node.on('mouseout', toolTip.hide)
node.on('mouseover', function(d) {
var node = d3.select(this).node();
toolTip.show(d, node);
});
// node.on('contextmenu',function(){
// eskinBehaviours.contextOnSpecies(this);
// });
node.on('contextmenu',d3.contextMenu(
function(data){
return eskinBehaviours.getSpeciesContextMenu(data,contextHandler)
})
);
//add co valant modification to this node
addCovalantModification(node);
//add drag
node.call(drag);
}
/**
* process the co valant modification info for this node.
* @param {D3 selector} speciesNode d3 species node selector.
*/
function addCovalantModification(speciesNode){
try{
//for each species-node, renders its COVALENT MODIFICATIONS
var thisNode = speciesNode;
var thisNodeData = speciesNode.datum();
//add svg elements
var modifierListOfThisNode = modelHelper.getModifierListOfNode(thisNodeData);
var modifierNodesOfThisNode = thisNode.selectAll('.modifier-node')
.data(modifierListOfThisNode)
.enter()
.append('g').attr('class', 'modifier-node');
modifierNodesOfThisNode.append('path')
.attr('class', 'modifier-path')
.attr('d', function(d){
return shapeUtil.getEllipse(16, 16, d.parentSpecies.iWidth + 8 + d.pos*16, d.parentSpecies.iHeight - 8);
});
//.attr('style', "stroke-width: 1px; stroke: #000000; fill : #ffffff;");
modifierNodesOfThisNode.append('text')
.attr('x', function(d){return d.parentSpecies.iWidth + 12 + d.pos*16})
.attr('y', function(d){return d.parentSpecies.iHeight + 4})
.attr('class', "text-node")
.text(function(d){return d.modificationType});
//var covalentModification = d3.selectAll('.modifier-node');
modifierNodesOfThisNode.on('click', function(){
//eskinBehaviours.clickOnCovalentModification(d3.select(this),selection);
d3.event.stopPropagation();
});
modifierNodesOfThisNode.on('mousedown', function(){
eskinBehaviours.clickOnCovalentModification(d3.select(this),selection);
});
modifierNodesOfThisNode.on('contextmenu',d3.contextMenu(
function(data){
return eskinBehaviours.getCovalentContextMenu(data,contextHandler);
})
);
}
catch(err){
//console.warn(err);
}
}
var updateSpeciesCovalantModification = function (sId){
var speciesNode = d3.selectAll('.species-node')
.filter(function(d){return d.sId === sId});
speciesNode.selectAll('.modifier-node').remove();
addCovalantModification(speciesNode);
//clear all modfiier nodes.
//redraw all modifer nodes
}
/**
* add reaction node to view
* @param {Reaction} reaction reaction node to be added
*/
function addReaction(reaction){
var reaction_node = reactionG.selectAll('.reaction-node')
.data(arrReactions, function(d){return d.sId})
.enter()
.append('g')
.attr('class','reaction-node');
//add reaction node path
reaction_node.append('path')
.attr('d',function(d){
return d3scomos.getSymbol('REACTION',d);
})
.attr('class', 'reaction-path')
.attr('fill',function(d){return shapeUtil.getReactionFill(d.sType)});
// .attr("style", function(d){
// var reactionColor = "rgb("+d.color.iRed+","+d.color.iGreen+","+d.color.iBlue+")";
// //return "fill: "+reactionColor+"; stroke: "+reactionColor+";";
// });
// add text node
reaction_node.append('text')
.attr('text-anchor','start')
//TODO: used static locations assuming node size + 20 + 5 padding
.attr('x',function(d){return 25;})
//TODO: used static locations assuming node hiehgt + 20/2 + 5 padding
.attr('y',function(d){return 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
// move node to its correct position
reaction_node.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
// TODO: add event handlers
// .on('mouseover', dispatch.reactionHover)
reaction_node.on('click', function(){
eskinBehaviours.mouseClickedOnReaction(this,selection,construction,panMode);
});
reaction_node.on('mouseout', toolTip.hide)
reaction_node.on('mouseover', function(d) {
var node = d3.select(this).node();
toolTip.show(d, node);
});
reaction_node.on('contextmenu',d3.contextMenu(
function(data){
return eskinBehaviours.getReactionContextMenu(data,contextHandler)
})
);
//add drag
reaction_node.call(drag);
updateEdges();
}
function updateEdges(){
//updates the edge collection
links = [];
arrReactions.map(function(reaction){
reaction.getAllEdges().forEach(function(edge){links.push(edge)});
});
addEdge();
}
/**
* updates the viewElement by updating view properties
* @return
*/
function update(){
//update compartment-nodes
var allCompartments = compartG.selectAll('.compartment').data(arrCompartments,function(d){return d.sId});
//update shape-path
allCompartments.select('path')
.attr('class', 'compartment-path')
.attr('d',function(d){
if(d.sType == "Rectangular"){
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}else if(d.sType == "Circular"){
return shapeUtil.getEllipseWithTickness(d.iHeight, d.iWidth,10);
}else{
return shapeUtil.getRoundedRectWithTickness(d.iHeight, d.iWidth,10);
}
})
.attr('style',function(d){
//dont show default compartment
if(d.sId === 'default') return;
return 'fill:'+'rgb('+d.color.iRed+','+d.color.iGreen+','+d.color.iBlue+')';
});
// add text-node
allCompartments.select('text')
.attr('text-anchor','start')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return 0;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
//move compartment node to its corrrection position
allCompartments.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
allCompartments.exit().each(function(d){console.warn('removing Compartment : '+d.sId);}).remove();
//update speceis-node
var allSpeceis = speciesG.selectAll('.species-node').data(arrSpecies,function(d){return d.sId})
//add shape
allSpeceis.select('path')
.attr('d',function(d){
return d3scomos.getSymbol(d.sType,d);
})
.attr('class', 'species-path')
.attr('fill',function(d){ if(d.sType.toUpperCase() === 'COMPLEX') return 'url(#complexFill)'; return 'url(#speciesLinear)';});
//add text
allSpeceis.select('text')
.attr('text-anchor','middle')
//TODO: used static spacing for text make this configurable
.attr('x',function(d){return d.iWidth/2;})
.attr('y',function(d){return d.iHeight + 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
//transform these nodes there right posistions
allSpeceis.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
//update covalent modification
allSpeceis.each(function(d){
var thisNode = d3.select(this);
thisNode.selectAll('.modifier-node').remove();
addCovalantModification(thisNode)
})
allSpeceis.exit().each(function(d){console.warn('removing species : '+d.sId);}).remove();
//update reaction nodes
var allReactions = reactionG.selectAll('.reaction-node').data(arrReactions, function(d){return d.sId});
allReactions.select('path')
.attr('d',function(d){
return d3scomos.getSymbol('REACTION',d);
})
.attr('class', 'reaction-path')
.attr('fill',function(d){return shapeUtil.getReactionFill(d.sType)});
// .attr("style", function(d){
// var reactionColor = "rgb("+d.color.iRed+","+d.color.iGreen+","+d.color.iBlue+")";
// //return "fill: "+reactionColor+"; stroke: "+reactionColor+";";
// });
// add text node
allReactions.select('text')
.attr('text-anchor','start')
//TODO: used static locations assuming node size + 20 + 5 padding
.attr('x',function(d){return 25;})
//TODO: used static locations assuming node hiehgt + 20/2 + 5 padding
.attr('y',function(d){return 15})
.text(function(d){return d.sName})
.attr('class', 'text-node');
// move node to its correct position
allReactions.attr("transform", function(d){ return "translate(" + d.position.iX + "," + d.position.iY + ")"; });
allReactions.exit().each(function(d){console.warn('removing Reaction : '+d.sId);}).remove();
//Recreate All edges
updateEdges();
}
/**
* adds edge to the view
* @param {edge} edge
*/
function addEdge(edge){
//remove edges if any and redraw
edgesG.selectAll('.link').remove();
var link = edgesG.selectAll('.link')
.data(links,function(d){return d.sId})
.enter()
.append('path')
.attr('class', 'link')
.attr('d', function(d){return shapeUtil.getPathCoordsForLine(d.source, d.target, d.role)})
.attr("style", function(d){
var marker;
switch(d.role){
case "REACTANT":
if(d.reversible) marker = "marker-mid:url(#filledArrow);";
else marker = "";//no arrow marker for this one
break;
case "PRODUCT":
marker = "marker-mid:url(#filledArrow);";
break;
case "MODIFIER":
if(d.sModifierType === 'Inhibitor')
marker = "marker-mid:url(#Line);";
else //defaults ot activator
marker = "marker-mid:url(#hollowArrow);";
break;
case "MODIFIER_INHIBITOR":
marker = "marker-mid:url(#Line);";
break;
case "MODIFIER_ACTIVATOR":
marker = "marker-mid:url(#hollowArrow);";
break;
default:
marker = "";
}
return marker+" stroke:"+d.getColorString()+";";
})
.on('click', function(){
eskinBehaviours.mouseClickedOnEdge(this,selection,panMode);
});
// link.on('click', dispatch.linkClick)
// .on('mouseover', dispatch.linkHover);
}
/**
* removes the node from svg/dom based on elem( sId)
* @param {String} speciesId sId of ele
* @return {D3 selection} d3 selection pointing to the removed node
*/
function removeSpeciesNode(speciesId){
//spliceNodefromNodeArray(arrSpecies,speciesId);
recreateAllDataArrays();
update();
// return d3.selectAll('.species-node')
// .filter(function(d){return d.sId === speciesId})
// .remove();
}
/**
* removes the reaction node from the view
* @param {String} reactionsId reaction node to be removed from view
* @return {D3 selector} D3 selector pointing to removed selection
*/
function removeReactionNode(reactionsId){
recreateAllDataArrays();
update();
// return d3.selectAll('.reaction-node')
// .filter(function(d){return d.sId === reactionsId})
// .remove();
}
/**
* removes the Compartment node from the view
* @param {String} compartmentsId reaction node to be removed from view
* @return {D3 selector} D3 selector pointing to removed selection
*/
function removeCompartment(compartmentsId){
recreateAllDataArrays();
update();
// return d3.selectAll('.compartment')
// .filter(function(d){return d.sId === compartmentsId})
// .remove();
}
function removeEdgeNode(edgeId){
spliceNodefromNodeArray(links,edgeId);
return d3.selectAll('.link')
.filter(function(d){return d.sId === edgeId})
.remove();
}
function recreateAllDataArrays (){
//clear all data arrays and recreate them
//and redraw them.
arrSpecies = d3.values(model.mapSpeciesLayouts);
arrCompartments = d3.values(model.mapCompartmentLayouts);
arrReactions = d3.values(model.mapReactionLayouts);
updateEdges();
}
/** return view object **/
function updateCursor(){
if(panMode === 'PAN')
svg.attr('style',svg.attr('style') + 'cursor: pointer;');
else
svg.attr('style',svg.attr('style') + 'cursor: default;');
}
return {
/**
* clears the canvas deletes all the visual contents and defaults to config params
*/
initCanvas : function(){
d3.select(rootElem).select("svg").remove();
initCanvas();
},
changeGraphRoot : function(_rootElem){
console.warn(rootElem);
rootElem = _rootElem;
selection = new scomosSelections(rootElem);
initCanvas();
//trigger hard redraw.
recreateAllDataArrays();
arrCompartments.map(this.addNode);
arrSpecies.map(this.addNode);
arrReactions.map(this.addNode);
//reset zoomLevel before values of tab switch
rootG.attr("transform", "translate(" + zoomBehaviour.translate() + ")scale(" + zoomBehaviour.scale() + ")");
updateEdges();
update();
eskinDispatch.rendered();
},
/**
* A broker method to add a elem to the view
* @param {Compartment|Species|Reaction|Edge} node node to be inserted to view
*/
addNode : function(node){
if(node.getEntityType() === "Species"){
updateNodeArray(arrSpecies,node);
addSpecies(node);
}
else if(node.getEntityType() === "Compartment"){
updateNodeArray(arrCompartments,node);
addCompartment(node);
}
else if(node.getEntityType() === "Reaction"){
updateNodeArray(arrReactions,node);
addReaction(node);
}
else if(node.getEntityType() === 'Edge'){
updateNodeArray(links,node);
addEdge(node);
}
else{
throw new Error("Unsupported node type : " +node.getEntityType());
}
},
/**
* remove node from view
* @param {SBML object} node Valid SBML object
* @return {D3 selection} reference to removed d3 selection
*/
removeNode :function(nodesId,nodeType){
if(nodeType === "Species"){
return removeSpeciesNode(nodesId);
}
else if(nodeType === "Compartment"){
return removeCompartment(nodesId);
}
else if(nodeType === 'Reaction'){
return removeReactionNode(nodesId);
}
else if(nodeType === 'Edge'){
return removeEdgeNode(nodesId);
}
// else if(node.constructor.name === "Compartment"){
// updateNodeArray(arrCompartments,node);
// addCompartment(node);
// }
// else if(node.constructor.name === "Reaction"){
// updateNodeArray(arrReactions,node);
// addReaction(node);
// }
else{
throw new Error("Unsupported node type : " +node.constructor.name);
}
update();
},
updateSpeciesCovalantModification:function(sId){
updateSpeciesCovalantModification(sId);
},
/**
* updates the ViewPort to fit the passed vRect
* @param {{top,left,width,height}} vRect [description]
* @return {[type]} [description]
*/
fitToScreen:function(){
var vRect = model.updateModelBoundaries();
svg.attr("viewBox",vRect.top + " " + vRect.left + " " + vRect.width + " " + vRect.height)
.attr("preserveAspectRatio", "xMinYMin meet");
rootG.attr('transform','scale(1)');
zoomBehaviour.translate( [0, 0]);
zoomBehaviour.scale(1);
},
/**
* Resets the zoom to 1
* @return {} reset zoom
*/
resetZoom:function(){
var transStr = rootG.attr('transform');
if(!transStr) return;
var part1 = transStr.split('scale')[0];
var part2 = 'scale(1)'
var targetStr = part1.concat(part2);
rootG.attr('transform',targetStr);
zoomBehaviour.translate( [0, 0]);
zoomBehaviour.scale(1);
},
/**
* zooms in
* @return {number} current zoom level
*/
zoomIn:function(){
//var transFactor = shapeUtil.getScaleAndTransformFromString(rootG.attr('transform'));
zoomBehaviour.scale(zoomBehaviour.scale()+0.3);
//rootG.attr("transform","scale(" + zoomBehaviour.scale() + ")");
rootG.attr("transform", "translate(" + zoomBehaviour.translate() + ")scale(" + zoomBehaviour.scale() + ")");
},
zoomOut:function(){
zoomBehaviour.scale(zoomBehaviour.scale()-0.3);
rootG.attr("transform", "translate(" + zoomBehaviour.translate() + ")scale(" + zoomBehaviour.scale() + ")");
},
normalizeZoomBehaviour:function(){
zoomBehaviour.scale(zoomBehaviour.scale);
zoomBehaviour.transform(zoomBehaviour.transform);
},
/**
* sets the pan Mode
* @param {string } __panMode [description]
* @return {[type]} [description]
*/
setPanMode:function(__panMode){
//clear the selection mode is changed
if(panMode !== __panMode) {
d3.selectAll('.selected').classed('selected',false);
selection.clear();
resizer.clearResizer();
}
panMode = __panMode;
updateCursor();
},
refresh:function(){
update();
var vRect = model.updateModelBoundaries();
svg.attr("viewBox",vRect.top + " " + vRect.left + " " + vRect.width + " " + vRect.height)
.attr("preserveAspectRatio", "xMinYMin meet");
selection.markSelected();
},
/**
* apply the gradient pattern on proveded nodes with passed color and second values as violet
* @param {[{geneName:String,color:String}]} overlayNodes genename maps to sName of the node, color is string property of type rgb(int,int,int)
* if no color ignore.
* @return finds the specified node in view and applies the said color gradient to it.
* @throws {customErrors.ValidationError} throws error if passed in node does not exist.
*/
applyGradientsToSpecies:function(overlayNodes){
overlayNodes.each(function(node){
// find this node in species map
var thisSpecies = d3.selectAll('.species-node')
.filter(function(d){return d.sName.toUpperCase() === node.sName});
if(!thisNode)
throw customErrors.ValidationError("Node "+node.sName + " not found in pathway map")
})
},
/**
* get this views selection object
* @return {[type]} [description]
*/
getSelection : function(){
return selection;
},
enableOverlayMode : function(){
overlayMode = true;
//unbind all context events
d3.selectAll('.species-node').on('contextmenu',null);
d3.selectAll('.reaction-node').on('contextmenu',null);
d3.selectAll('.compartment').on('contextmenu',null);
svg.on('contextmenu',null);
}
} //return ends here
}
/**
* gene Expression overlay module.
* Deals with :
* 1) accepting the gene and there experiment values, cutoff status , and color shades
* 2) controlling gene appearance based on their cutoff status.
* 3) Creating and applying gradient fill to the said genes.
* 4) remembering the user state configurations during redraws
* 5) Settings restoration methods
* etc
*/
//--------------------------------
// -------- Design Assumptions---
//--------------------------------
/**
* Gene Expression overlay will be the hidden part of the SBML model
* i.e. will be accessible through the getter mehtods only
* that way json wont get deformed
* TODO:Another consideration is that input data format might change ( as it result of exposed API)
* so there must be provision for external data configuration functions
*/
/**
* Creates the GEOverlay Object
* @constructor
* @param {{fileHeaderMap:[String],
* geneData:{'geneName':{
* 'inPathwayMap':"String",
* expressionValues:[number]
* visualData:{
* overlayStateList:[overlaystate shortcode:String]
* colorList:[String]
* }
* }
* }
* }} GEOData overlay data produced by the eskin geneOverlay API]
*@param {{
* 'currentExperiment':'expressionValue1',
* 'filters':['UR','DR',UA,ND]
* }}
* @return {[type]} [description]
*/
var GEOverlay = function(GEOData,GEOConfig){
/* GEOData format
{
"fileHeaderMap": {
"expressionValue1": "Experiment 1",
"expressionValue2": "Experiment 2",
"expressionValue3": "Experiment 3"
},
"geneData":{
"ACE": {
"expressionValues": [230,21.75232,130],
"overlayStateList": ["UR","UA","UR","ND"],
"colorList": ["rbg(255,89,0)","rgb(255, 255, 0)","rbg(255,236,0)"]
}
}
}
*/
var fileHeaderMap = GEOData.fileHeaderMap;
//TODO : remove -1 once geneName is removed from the header map
var noOfExperimentConditions = d3.keys(fileHeaderMap).length;//-1 as geneName is not experiment coidtions
var colorConstants = shapeConstants.gradient;
/**
* buildDataSet for this experimentKey
* @param {string} experimentKey String header file key handler
* @return {{'geneName':[expressionvalue,overlayStatus,colorstring]}} processable array of gene name and Expression values
*/
function buildDataSet(experimentKey){
var _expIndex = parseInt(experimentKey.split('Value')[1])-1;
var returnThis = {};
Object.keys(GEOData.geneData).forEach(function(geneName){
var thisGene = GEOData.geneData[geneName];
if(thisGene.expressionValues.length === 0){
returnThis[geneName] = [null,'ND',colorConstants.species.firstFill];
}
else {
returnThis[geneName] = [ thisGene.expressionValues[_expIndex],
thisGene.overlayStateList[_expIndex],
thisGene.colorList[_expIndex]
];
}
});
// GEOData.geneData.forEach(function(geneName){
//
// })
return returnThis;
}
/**
* returns graient ID stringify
* @param overlayStatus
* @param color
* @param gardientIdString
* @return {String} gradient ID to be applied
*/
function getGradient(overlayStatus,color,gardientIdString){
var gradientID;
switch (overlayStatus) {
case 'UR':
gradientID = shapeUtil.getGEOGradient(color,colorConstants.GEOverlay.secondFill,gardientIdString);
break;
case 'DR':
gradientID = shapeUtil.getGEOGradient(color,colorConstants.GEOverlay.secondFill,gardientIdString);
break;
case 'UA':
gradientID = shapeUtil.getGEOGradient(color,colorConstants.GEOverlay.secondFill,gardientIdString);
break;
case 'ND':
gradientID = shapeUtil.getGEOGradient(color,colorConstants.GEOverlay.secondFill,gardientIdString);
break;
default:
throw new Error("Unknown overlay status : "+overlayStatus + " UR,DR,UA,ND are only valid values");
}
return gradientID;
}
/**
* apply gene experssion data and color to genes(speceis) as per constructed data list-item
* @param {{'geneName':[expressionvalue,overlayStatus,colorstring]}} thisExpData filtered data for curernt experiment
* @return {}
*/
function applyGEODataToSpecies(thisExpData){
d3.selectAll('.species-node')
//.filter(function(d){return d.sType !== 'COMPLEX'})
.each(function(d,i){
//if this d.sName is in thisExpData process
var thisGene = thisExpData[d.sName.toUpperCase()];
if(!thisGene)
thisGene = [null,'ND',colorConstants.species.firstFill]
var gradIdString = 'geoGrad_'+objectHelper.getStringHash.apply(d.sName);
var gradientID = getGradient(thisGene[1],thisGene[2],gradIdString);
d.overlayStatus(thisGene[1]);
//apply gradient string
d3.select(this).select('.species-path').attr('fill','url(#'+gradientID+')');
})
}
/**
* updates the gene Color based on new data and filter values
* @return {[type]} [description]
*/
function _updateGEOData(){
var dataSet = buildDataSet(GEOConfig.currentExperiment);
// console.info(dataSet);
d3.selectAll('.species-node')
//.filter(function(d){return d.sType !== 'COMPLEX'})
.each(function(d,i){
//if this d.sName is in thisExpData process
var thisSpecies = d3.select(this);
var thisGene = dataSet[d.sName.toUpperCase()];
if(!thisGene )
thisGene = [null,'ND',colorConstants.species.firstFill];
//bind overlayStatus to species
d.overlayStatus(thisGene[1]);
// is this gene fitered out
var isFiltered = GEOConfig.filters.indexOf(thisGene[1]) !== -1;
//add remove disabled class accordingly
thisSpecies.classed('disabled-node',isFiltered);
var colr1 = isFiltered?shapeConstants.gradient.GEOverlay.disabledFill:thisGene[2];
var colr2 = isFiltered?shapeConstants.gradient.GEOverlay.disabledFill:thisGene[2];
var colr3 = isFiltered?shapeConstants.gradient.GEOverlay.disabledFill:shapeConstants.gradient.GEOverlay.secondFill;
var gradIdString = '#geoGrad_' + objectHelper.getStringHash.apply(d.sName);
//d3.select(gradIdString).select("stop")
d3.select(gradIdString+' > stop:nth-child(1)')
.transition()
.attr("stop-color", colr1);
d3.select(gradIdString+' > stop:nth-child(2)')
.transition()
.attr("stop-color", colr2);
d3.select(gradIdString+' > stop:nth-child(3)')
.transition()
.attr("stop-color", colr3);
})
//update reaction colors accordingly
updateReactionNodes();
}
/**
* helper functin for update edges
* @param {Reaction} reaction reaction of which edges are to be updated for GEOverlay
* @param {Boolean} isDisabled is this reaction node disabled
* @return {} colors edges with there valid styles ignoring overlay status
*/
function colorReactionEdges(reaction,isDisabled,connectedSPecies_OVStatus){
//make the edge follow fill style of reaction
/**
* sIds of all the edges of this reaction
* @return {[String]}
*/
var allReactionEdges = reaction.datum()
.getAllEdges()
.map(function(d){return d.sId});
var allLinks = d3.selectAll('.link')
.filter(function(d){ return allReactionEdges.indexOf(d.sId) !== -1 });
var markerPostFix = isDisabled == true?'_disabled':'';
allLinks.attr("style", function(d){
var marker;
var colorString = isDisabled == true?colorConstants.GEOverlay.disabledFill : d.getColorString();
/** handle this situation to activate edges partially **/
if(!isDisabled){
var species ;
if(d.source.constructor.name === 'Species')
species = d.source
else
species = d.target
var isFiltered = GEOConfig.filters.indexOf(connectedSPecies_OVStatus[species.sId]) !== -1;
if(isFiltered){
colorString = colorConstants.GEOverlay.disabledFill;
markerPostFix = '_disabled';
}
}
switch(d.role){
case "REACTANT":
if(d.reversible) marker = "marker-mid:url(#filledArrow"+markerPostFix+");";
else marker = "";//no arrow marker for this one
break;
case "PRODUCT":
marker = "marker-mid:url(#filledArrow"+markerPostFix+");";
break;
case "MODIFIER":
if(d.sModifierType === 'Inhibitor')
marker = "marker-mid:url(#Line"+markerPostFix+");";
else //defaults ot activator
marker = "marker-mid:url(#hollowArrow"+markerPostFix+");";
break;
default:
marker = "";
}
return marker+" stroke:"+ colorString +";";
})
}
/**
* find all the reaction node and apply the disabledFill.
* @return {[type]} [description]
*/
var updateReactionNodes = function(){
var allReactions = d3.selectAll('.reaction-node');
var allSpeceis_OVstatus = {};
d3.selectAll('.species-node')
.each(function(d){
allSpeceis_OVstatus[d.sId] = d.overlayStatus();
});
allReactions.each(function(d){
var thisReaction = d3.select(this);
var connectedSpecies = thisReaction.datum().getAllConnectedSpeciesId();
var connectedSPecies_OVStatus ={};
connectedSpecies.map(function(d){connectedSPecies_OVStatus[d] = allSpeceis_OVstatus[d]});
var disableReaction = true;
for(var index in connectedSpecies){
//reactionFill_disabled
if(GEOConfig.filters.indexOf(allSpeceis_OVstatus[connectedSpecies[index]]) == -1){
disableReaction = false;
break;
}
}
//update reaction_border baseed on filter status
thisReaction.classed('disabled-node',disableReaction);
var currentFill = thisReaction.select('path').attr('fill');
if(disableReaction) {
//change fill only if required
if(currentFill !== 'url(#reactionFill_disabled)'){
thisReaction.select('path').attr('fill','url(#reactionFill_disabled)');
}
}
else{
if(currentFill == 'url(#reactionFill_disabled)'){
thisReaction.select('path').attr('fill',function(d){return shapeUtil.getReactionFill(d.sType)});
}
}
//update edges of this reaction
colorReactionEdges(thisReaction,disableReaction,connectedSPecies_OVStatus);
});
}
/**
* bootstraps the first GEORun
* @return {[type]} [description]
*/
var bootstrap = function(){
applyGEODataToSpecies(buildDataSet(GEOConfig.currentExperiment));
_updateGEOData();
}
//start GEO process
bootstrap();
//TODO : add handler methods
return {
/**
* Updates the data and GEO config used to draw GEOverlay. ALso animates the color change
* @param {{geneName:overlayStatus}} GEOData GEOverlay data-
* @param {{currentExperiment:String}} GEOConfig GEOConfig data-
* @return {} changes the color and animates the change
*/
updateGEOData:function(_GEOData,_GEOConfig){
//update the GEO data if valid new data is passed
//or retain previous values
GEOData = _GEOData || GEOData
GEOConfig = _GEOConfig || GEOConfig
_updateGEOData();
//bootstrap();
}
};
}
/**
* This module contains various operations that will be
* used in construction of the model Graph.
*/
/**
* creates eskinOperations Object
* @constructor
* @param {String} rootElem fully qualified div selector
* @param {Object} config a config object
* @returns {Object} eskinOperations return eskinOperationsObject
*/
var eskinOperations = function(rootElem,config){
//rootElem is compulsory parameter
//if not passed will result in error
var keyStore = new eSkinkeyStore();
var model = null;
var view = null;
var geneExpressionOverlay = null;
var construction = null;
var factory = SBMLFactory();
var undoManager = new d3scomos.undoManager();
var contextHandler = null;
//---- add geo code ---
//TODO: this is supposed to be removed once done with drag and drop
var geoAdd ;
//-----------
if(!rootElem){
d3scomos.Logger.error("eskin model operations rootElem not passed");
return null;
}
//var thisSVG;
/** return this object **/
var operations = {
undoManager : undoManager,
initCanvas : function(){
view.initCanvas();
},
/**
* initializes the modelData object
* @param {Object} data object with init params
* @throws {ValidationError} if non optional params are missing
**/
initModel : function(data){
//clear keyStore
keyStore.clear();
keyStore.addKey(data.sId);//
//initModel data will loose any previous data
model = factory.getSBMLModel(data);
construction = new modelConstructor(rootElem,keyStore,model,this);
contextHandler = {cut:this.cut,copy:this.copy,paste:this.paste,delete:this.deleteSelected};
view = eskinView(rootElem,config,model,undoManager,construction,contextHandler);
},
/**
* accepts molecule(species) data and adds it to model after validation
* @param {Object} species data
* @throws {ValidationError} if non optional params are missing
**/
addSpecies : function addSpecies (species){
if(!species || species === {})
throw new TypeError("Empty or no species data passed");
//validate the data
try{
undoableOperations.constructSpecies(species,keyStore,model,view);
undoManager.add({
undo:function(){
undoableOperations.destructSpecies(species.sId,keyStore,model,view);
},
redo : function(){
undoableOperations.constructSpecies(species,keyStore,model,view);
}
})
//console.warn(undoManager);
//dispatch event informing undoManager is changed
eskinDispatch.undoManagerEvent(undoManager);
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add species: validation failed "+err.message);
}
throw err;
}
},
/**
* deltes the current scomosSelections
* TODO: for now only one species will be deleted i.e. does not support multi select delete
* ALso does not support complex delete
* @return {Boolean} deletion status
*/
deleteSelected:function(){
//deletethe selected species if any
var currSelection = d3.selectAll('.selected');
if(currSelection[0].length == 0)
return;
var confirmDelete = confirm("Please note that selected entity and all its children will be deleted. Do you wish to proceed with this action?");
if(!confirmDelete) {
__logger.info('Deletion aborted by user.')
return;
}
try{
var currSelection = view.getSelection().getDestructableSelection();
undoableOperations.destructSelection(currSelection,model,view,keyStore);
view.refresh();
undoManager.add({
undo:function(){
undoableOperations.constructSelection(currSelection,model,view,keyStore);
},
redo : function(){
undoableOperations.destructSelection(currSelection,model,view,keyStore);
}
});
//console.warn(undoManager);
//dispatch event informing undoManager is changed
eskinDispatch.undoManagerEvent(undoManager);
view.getSelection().clear();
eskinDispatch.nodeDeleted();
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add species: validation failed "+err.message);
}
throw err;
}
},
/**
* adds species as part of GEO drag drop functionality
* TODO: remove this method once drag drop is figured out
* @param {Object} species Species object to be added. Position values passed in will be ignored.
*/
addSpeciesGEO : function addSpeciesGEO (species){
species.sId = keyStore.getNextSpecies();
this.addSpecies(species);
geneExpressionOverlay = null; //so that new data is loaded
},
/**
* accepts compartment data and adds it to model after validation
* @param {Object} compartment data
* @throws {ValidationError} if non optional params are missing
**/
addCompartment : function addCompartment (compartment){
if(!compartment || compartment === {})
throw new TypeError("Empty or no Compartment data passed");
try{
undoableOperations.constructCompartment(compartment,keyStore,model,view);
undoManager.add({
undo:function(){
undoableOperations.destructCompartment(compartment.sId,keyStore,model,view);
},
redo : function(){
undoableOperations.constructCompartment(compartment,keyStore,model,view);
}
})
//console.warn(undoManager);
//dispatch event informing undoManager is changed
eskinDispatch.undoManagerEvent(undoManager);
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add Compartment: validation failed "+err.message);
}
throw err;
}
},
/**
* accepts reaction data and adds it to model after validation
* @param {Object} compartment
* @throws {ValidationError} if non optional params are missing
**/
addReaction : function addReaction (reaction){
if(!reaction || reaction === {})
throw new TypeError("Empty or no species data passed");
//reactions received from the eskin server lacks the iHeight and iWidth
//add them
reaction.iHeight = reaction.iHeight || 20;
reaction.iWidth = reaction.iWidth || 20;
try{
undoableOperations.constructReaction(reaction,keyStore,model,view);
undoManager.add({
undo:function(){
undoableOperations.destructReaction(reaction.sId,keyStore,model,view);
},
redo : function(){
undoableOperations.constructReaction(reaction,keyStore,model,view);
}
})
//console.warn(undoManager);
//dispatch event informing undoManager is changed
eskinDispatch.undoManagerEvent(undoManager);
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add Reaction: validation failed "+err.message);
}
throw err;
}
},
/**
* adds covalent modifier to species species
* @param {String} sId [description]
* @param {String} modifierType modifier string. Must be valid string. Valid string list is available in construnctionConstants.
* @return {String} sModification returns updated sModification string.
* @throws customErrors.ValidationError if invalid sId is passed
*/
addCovalantModification:function(sId,modifierType){
try{
return undoableOperations.addCovalantModification(sId,modifierType,model,view)
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add covalentModification: Operation failed for sId"+sId+'.Reason ;'+err.message);
}
throw err;
}
},
/**
* adds the newModifier to the reaction.
* @param {String} reactionSId source reaction.
* @param {{sID:String,bConstant:boolean ... etc}} prouctOptions product build options.
* @return {} adds the new product if valid, also puts the operation on undoManager.
*/
addProduct : function(reactionSId,prouctOptions){
try{
undoableOperations.addProduct(reactionSId,prouctOptions,model,view);
undoManager.add({
undo : function(){
undoableOperations.removeProduct(reactionSId,prouctOptions.sId,model,view);
},
redo : function(){
undoableOperations.addProduct(reactionSId,prouctOptions,model,view);
}
})
eskinDispatch.undoManagerEvent(undoManager);
}catch(err){
__logger.error('Add product Failed. Reason : ' + err.message);
throw err;
}
},
addReactant : function(reactionSId,reactantOptions){
try{
undoableOperations.addReactant(reactionSId,reactantOptions,model,view);
undoManager.add({
undo : function(){
undoableOperations.removeReactant(reactionSId,reactantOptions.sId,model,view);
},
redo : function(){
undoableOperations.addReactant(reactionSId,reactantOptions,model,view);
}
})
eskinDispatch.undoManagerEvent(undoManager);
}catch(err){
__logger.error('Add Reactant Failed. Reason : ' + err.message);
throw err;
}
},
addModifier : function(reactionSId,modifierOptions){
try{
undoableOperations.addModifier(reactionSId,modifierOptions,model,view);
undoManager.add({
undo : function(){
undoableOperations.removeModifier(reactionSId,modifierOptions.sId,model,view);
},
redo : function(){
undoableOperations.addModifier(reactionSId,modifierOptions,model,view);
}
})
eskinDispatch.undoManagerEvent(undoManager);
}catch(err){
__logger.error('Add Modifier Failed. Reason : ' + err.message);
throw err;
}
},
/**
* provides node key value update hook for property explorer, so that undo redo will be supported.
* @param {string} sId sId of the node to be updated.
* @param {string} sKey key in this node that is to be updated.
* @param {String|Object} newVal newValue to be updated on this object. Mostly is string could be the Object somethimes.
* @return {instanceof Base} returns updated object.
*/
setNodeValueByKey:function(sId,sKey,newVal){
//check if key exists.
try{
var thisNode = model.getNodeObjectBySId(sId);
var oldVal = thisNode[sKey];
model.setNodeValueByKey(sId,sKey,newVal);
view.refresh();
resizer.updateResizer();
undoManager.add({
undo:function(){
model.setNodeValueByKey(sId,sKey,oldVal);
view.refresh();
resizer.updateResizer();
},
redo:function(){
model.setNodeValueByKey(sId,sKey,newVal);
view.refresh();
resizer.updateResizer();
}
});
eskinDispatch.undoManagerEvent(undoManager);
}
catch(error){
__logger.error('setNodeValueByKey Falied : ' + error.message);
throw error;
}
},
getNodeNameBySId : function(sId){
return model.getNodeObjectBySId(sId).sName;
},
/**
* fits this view to the screen
* @return {[type]} [description]
*/
fitToScreen:function(){
view.fitToScreen();
},
resetZoom : function(){
view.resetZoom();
},
zoomIn : function(){
return view.zoomIn();
},
zoomOut : function(){
return view.zoomOut();
},
setViewMode:function(__mode){
__mode = __mode.toUpperCase();
var __panMode;
switch (__mode) {
case "PAN":
__panMode = __mode;
break;
case "SELECT":
__panMode = __mode;
break;
default:
console.log("Invalid pan mode " + __mode + " defaulting mode PAN")
__panMode = "PAN";
break;
}
view.setPanMode(__panMode);
},
/**
* provides direct access to underlying model object
* avoid using this added to enable better testing
**/
getModel : function(){
return model;
},
/**
* loads the pre created SBML model instead of creating new one.
* @param {SBMLModel} _model Precreated SBML model.
* @return {} loads this model as the model.
*/
loadSBMLModel : function(_model){
},
refreshView:function(){
view.refresh();
//if(geneExpressionOverlay) geneExpressionOverlay.refresh();
},
/**
* initializes SBMLModel with this data and activates GEO functionalities for this Model
* @param {{fileHeaderMap:[String],
* geneData:{'geneName':{
* 'inPathwayMap':"String",
* expressionValues:[number]
* visualData:{
* overlayStateList:[overlaystate shortcode:String]
* colorList:[String]
* }
* }
* }
* }} GEOData overlay data produced by the eskin geneOverlay API]
* @return {[type]} [description]
* @throws {customErrors.ValidationError}
*/
loadGEOData:function(GEOData,GEOConfig){
//model.setGEOData(GEOData);
//if(!geneExpressionOverlay)
geneExpressionOverlay = new GEOverlay(GEOData,GEOConfig);
view.enableOverlayMode();
//else
//geneExpressionOverlay.updateGEOData(GEOData,GEOConfig);
//var GeoConfig = {'currentExperiment':'expressionValue1'};
//geneExpressionOverlay = new GEOverlay(model,{'fileHeaderMap':fHeader,'geneData':mTestData},GeoConfig);
},
changeRootElem : function(newRootElem){
rootElem = newRootElem;
view.changeGraphRoot(rootElem);
construction.updateRootElem(rootElem);
},
cut : function(){
//copy content to the clip board
clipboard.copy(view.getSelection().getCopiableSelection());
_ops.deleteSelected();
view.refresh();
// trigger destructSelection
},
copy : function(){
// copy contents to clipboard.
clipboard.copy(view.getSelection().getCopiableSelection());
},
paste : function(){
try{
//means was triggered by contexMenu
if(d3.event){
var pasteAt = modelHelper.getTransformedCordinates(rootElem,event);
}
var pastableSelection = modelHelper.getPastableSelection(clipboard.paste(),keyStore,pasteAt);
model.updateModelBoundaries();
console.warn(pastableSelection);
undoableOperations.constructSelection(pastableSelection,model,view,keyStore,{markSelected:true});
undoManager.add({
undo : function(){
undoableOperations.destructSelection(pastableSelection,model,view,keyStore);
},
redo : function(){
undoableOperations.constructSelection(pastableSelection,model,view,keyStore);
}
});
eskinDispatch.undoManagerEvent(undoManager);
}
catch(err){
__logger.error('Paste failed : '+err.message)
}
},
checkClipboard : function(){
clipboard.triggerClipboardEvent();
},
/**
* selectes node based on the provied type.
* @param {String} nodeSId node index to be selected.
* @param {String} nodeType node type seelcted.
* @return {clickevent dispatch} dispatches appropriate click event.
*/
selectNode : function(nodeSId,nodeType,ctrlKey){
//find the node and select.
if(!ctrlKey) ctrlKey = false;
else
ctrlKey = true;
var eventOptions = {ctrlPressed:ctrlKey};
switch (nodeType) {
case "Species":
var speciesNode = d3.selectAll(".species-node").filter(function(d){return d.sId === nodeSId});
modelHelper.handleExternalNodeSelection(speciesNode,view.getSelection(),ctrlKey);
eskinDispatch.speciesClick(speciesNode.datum(),speciesNode.node(),eventOptions);
break;
case "Reaction":
var reactionNode = d3.selectAll(".reaction-node").filter(function(d){return d.sId === nodeSId});
modelHelper.handleExternalNodeSelection(reactionNode,view.getSelection(),ctrlKey);
eskinDispatch.reactionClick(reactionNode.datum(),reactionNode.node(),eventOptions);
break;
case "Compartment":
var compartmentNode = d3.selectAll(".compartment").filter(function(d){return d.sId=== nodeSId});
modelHelper.handleExternalNodeSelection(compartmentNode,view.getSelection(),ctrlKey);
eskinDispatch.compartmentClick(compartmentNode.datum(),compartmentNode.node(),eventOptions);
break;
default:
}
},
/**
* Wrapper for all construnction methods
* @type {Object}
*/
construction : {
/**
* sets the construction mode on/off.
* @param {Boolean} isEnabled enable or disable the construction mode
* @return {} [description]
*/
enableConstruction:function(isEnabled){
if(!construction)
throw new Error('Operation failed: Enable Construnction mode.')
if(isEnabled == true)
construction.enable();
else
construction.disable();
},
/**
* returns all the construcion tools supported by the library
* @return {[String]} Array of Tools names without categories
*/
getAllTools:function(){
return d3.values(d3.values(constructionConstants.tools)[0]);
},
/**
* set the active tool
* @param {string} toolName active tool
* @return {string} current active tool
* @throws {Error} throws error if invaid toolName specified
*/
setActiveTool:function(toolName){
construction.setActiveTool(toolName)
},
setConstrunctionMode : function(mode){
return construction.setConstrunctionMode(mode);
},
}
};
var _ops = operations;//store refrence to self.
return operations;
}
/**
* Module will contain all the undoable operations.
*/
var undoableOperations = {
/**
* constructs a species object and adds it to the model and view.
* @param {Object} options SBML object options.
* @param {KeyStoer} keyStore instance of Keystore.
* @param {SBMLModel} model instance of active SBMLModel.
* @param {eskinView} view instance of eskinView object.
* @return {} construcns a species node and adss to view and other relevent components.
* @throws {customErrors.ValidationError} if invalid object params are provided.
*/
constructSpecies : function(options,keyStore,model,view){
try{
//TODO handle construction mode here
var speciesObj = SBMLFactory().getSpecies(options);//validates and throws exception if any
keyStore.addSpecies(speciesObj.sId);
//add this model to model
model.addSpecies(speciesObj);
//add this species to view
view.addNode(speciesObj);
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add species: validation failed "+err.message);
}
throw err;
}
},
/**
* destructs a species object and removes it to from model and view
* @param {Object} options SBML object options
* @param {KeyStoer} keyStore instance of Keystore
* @param {SBMLModel} model instance of active SBMLModel
* @param {eskinView} view instance of eskinView object
* @return {D3 selector} removes species node from all relevent components and returns selector to deleted node.
*/
destructSpecies : function(speciesId,keyStore,model,view){
try{
keyStore.removeKey(speciesId);
//add this model to model
model.removeSpecies(speciesId);
//add this species to view
return view.removeNode(speciesId,'Species');
}
catch(err){
__logger.error("Delete species: Operation failed "+err.message);
throw err;
}
},
constructReaction : function(reaction,keyStore,model,view){
//validate the data
try{
var reactionObj = SBMLFactory().getReaction(reaction);//validates and throws exception if any
keyStore.addReaction(reaction.sId);
model.addReaction(reactionObj);
view.addNode(reactionObj);
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add reaction: validation failed "+err.message);
}
throw err;
}
},
destructReaction : function(reactionsId,keyStore,model,view){
try{
keyStore.removeKey(reactionsId);
//add this model to model
model.removeReaction(reactionsId);
//add this species to view
return view.removeNode(reactionsId,'Reaction');
}
catch(err){
__logger.error("Delete Reaction: Operation failed "+err.message);
throw err;
}
},
constructCompartment : function(compartment,keyStore,model,view){
try{
var compartmentObj = SBMLFactory().getCompartment(compartment);//validates and throws exception if any
keyStore.addCompartment(compartment.sId);
//add this model to model
model.addCompartment(compartmentObj);
view.addNode(compartmentObj);
}
catch(err){
if(err instanceof customErrors.ValidationError){
__logger.error("add compartment: validation failed "+err.message);
}
throw err;
}
},
destructCompartment : function(compartmentsId,keyStore,model,view){
try{
keyStore.removeKey(compartmentsId);
//add this model to model
model.removeCompartment(compartmentsId);
//add this species to view
return view.removeNode(compartmentsId,'Compartment');
}
catch(err){
__logger.error("Delete Compartment: Operation failed "+err.message);
throw err;
}
},
constructEdge : function(edge,view,model){
edge.addEdgeToParents();
//trigger edge update on model
model.updateReactionEdges(edge.getParentReaction().sId);
view.refresh();
},
destructEdge : function(edge,view){
edge.removeFromParents();
view.removeNode(edge.sId,edge.getEntityType());
},
descructModification : function(modificationNode){
modificationNode.changeModificationType();
console.warn('removed modificationNode : '+modificationNode.pos);
},
/**
* construncts current selection methodically so that it can be rebuilt later
* @param {{'compartments':[Compartment],'species':[Species],'reactions':[Reaction],'edges':[Edge]}} toBeBuilt scomos selection object
* @param {SBMLModel} model current sbml model object
* @param {eskinView} view Current eskinView object
* @param {Keystore} keyStore current Keystore object
* @param {{markSelected:Boolean}} options options to be used while carying out construct Selection operation.
* @return {[Compartment|Species|Reaction|Edge`]} set of construncted objects so that objects can be rebuild as required.
*/
constructSelection : function(toBeBuilt,model,view,keyStore,options){
if(toBeBuilt.hasOwnProperty('compartments'))
toBeBuilt.compartments.
forEach(function(compartment){undoableOperations.constructCompartment(compartment,keyStore,model,view)});
if(toBeBuilt.hasOwnProperty('species'))
toBeBuilt.species.
forEach(function(species){undoableOperations.constructSpecies(species,keyStore,model,view)});
if(toBeBuilt.hasOwnProperty('reactions'))
toBeBuilt.reactions.
forEach(function(reaction){undoableOperations.constructReaction(reaction,keyStore,model,view)});
if(toBeBuilt.hasOwnProperty('edges'))
toBeBuilt.edges
.forEach(function(edge){undoableOperations.constructEdge(edge,view,model)});
if(options && options.hasOwnProperty('markSelected') && options.markSelected){
view.getSelection().clear();
modelHelper.selectNodesByData(toBeBuilt);
}
return toBeBuilt;
},
/**
* Destroys current selection methodically so that it can be rebuilt later
* @param {{'compartments':[Compartment],'species':[Species],'reactions':[Reaction],'edges':[Edge]}} toBeDeleted scomos selection object
* @param {SBMLModel} model current sbml model object
* @param {eskinView} view Current eskinView object
* @param {Keystore} keyStore current Keystore object
* @return {[Compartment|Species|Reaction|Edge`]} set of removed objects so that objects can be rebuild as required.
*/
destructSelection : function(toBeDeleted,model,view,keyStore){
/**
* Algo :
* 1) getDraggableSelection s
* for all edges in s remove edges from there parents and update view from the view.
* for all species in s remove the species.
* for all the reaction in s remove reaction.
* for all the compartment in s remove compartment.
*/
//var selection = view.getSelection();
//{'compartments':[Compartment],'species':[Species],'reactions':[Reaction],'edges':[Edge]}
//var toBeDeleted = selection.getDestructableSelection();
if(toBeDeleted.hasOwnProperty('edges'))
toBeDeleted.edges
.forEach(function(edge){undoableOperations.destructEdge(edge,view)});
if(toBeDeleted.hasOwnProperty('modifications')){
//sort the modification nodes in order of pos
console.warn('before sort');
console.warn(toBeDeleted.modifications);
toBeDeleted.modifications.sort(function(ob1,ob2){return ob1.pos < ob2.pos;});
console.warn(toBeDeleted.modifications);
toBeDeleted.modifications.
forEach(function(modification){undoableOperations.descructModification(modification)});
}
if(toBeDeleted.hasOwnProperty('species'))
toBeDeleted.species.
forEach(function(species){undoableOperations.destructSpecies(species.sId,keyStore,model,view)});
if(toBeDeleted.hasOwnProperty('reactions'))
toBeDeleted.reactions.
forEach(function(reaction){undoableOperations.destructReaction(reaction.sId,keyStore,model,view)});
if(toBeDeleted.hasOwnProperty('compartments'))
toBeDeleted.compartments.
forEach(function(compartment){undoableOperations.destructCompartment(compartment.sId,keyStore,model,view)});
view.getSelection().clear();
return toBeDeleted;
},
/**
* adds the covalent modification to the passed species.
* @param {string} sId species sid to add modifier to.
* @param {string} modifierType modifierType to be appened.
* @param {SBMLModel} model SBMLModel instance.
* @param {eskinView} view eskinView object.
* @return {string} Newly formed sModification string.
* @throws {customErrors.ValidationError} if invalid or non existent sId passed.
*/
addCovalantModification:function(sId,modifierType,model,view){
var thisData = model.mapSpeciesLayouts[sId];
if(!thisData)
throw new customErrors.ValidationError(eskinMessages.error.validation_sId_does_not_exist);
if(!thisData.sModification){
thisData.sModification = constructionConstants.covalentToolMappings[modifierType];
}
else{
thisData.sModification = thisData.sModification.concat('-'+ constructionConstants.covalentToolMappings[modifierType]);
}
view.updateSpeciesCovalantModification(sId);//update covalent mod for this species specifically;
return thisData.sModification;
},
/**
* adds the product to the reaction.
* @param {String} reactionSId source reaciton sId.
* @param {{sID:String,bConstant:boolean ... etc}} prouctOptions product build options.
* @param {SBMLModel} model instanceof active SBMLModel.
* @param {eskinView} view instanceof active eskinView
* @return {String} returns this reactions sid if successful.
* @throws exception if invalid param i.e. trying to readd the product.
*/
addProduct : function(reactionSId,prouctOptions,model,view){
var productSId = prouctOptions.sId;
var reactionNode = model.mapReactionLayouts[reactionSId];
reactionNode.addProduct(prouctOptions);
model.updateReactionEdges(reactionNode.sId);
view.refresh();
return reactionSId;
},
/**
* adds the product to the reaction.
* @param {String} reactionSId source reaciton sId.
* @param {String} productSId target species sId.
* @param {SBMLModel} model instanceof active SBMLModel.
* @param {eskinView} view instanceof active eskinView
* @return {{removed product object}} returns removed species object, to enable reconstruction if required.
*/
removeProduct : function(reactionSId,productSId,model,view){
var reactionNode = model.mapReactionLayouts[reactionSId];
var returnThis = reactionNode.removeProduct(productSId);
model.updateReactionEdges(reactionNode.sId);
view.refresh();
return returnThis;
},
/**
* adds the reactant to the reaction.
* @param {String} reactionSId source reaciton sId.
* @param {{sID:String,bConstant:boolean ... etc}} prouctOptions reactant build options.
* @param {SBMLModel} model instanceof active SBMLModel.
* @param {eskinView} view instanceof active eskinView
* @return {String} returns this reactions sid if successful.
* @throws exception if invalid param i.e. trying to readd the product.
*/
addReactant : function(reactionSId,reactantOptions,model,view){
var reactantSId = reactantOptions.sId;
var reactionNode = model.mapReactionLayouts[reactionSId];
reactionNode.addReactant(reactantOptions);
model.updateReactionEdges(reactionNode.sId);
view.refresh();
return reactionSId;
},
/**
* removes the reactant from reaction.
* @param {String} reactionSId source reaciton sId.
* @param {String} reactantSId target species sId.
* @param {SBMLModel} model instanceof active SBMLModel.
* @param {eskinView} view instanceof active eskinView
* @return {{removed product object}} returns removed reactant object, to enable reconstruction if required.
*/
removeReactant : function(reactionSId,reactantSId,model,view){
var reactionNode = model.mapReactionLayouts[reactionSId];
var returnThis = reactionNode.removeReactant(reactantSId);
model.updateReactionEdges(reactionNode.sId);
view.refresh();
return returnThis;
},
addModifier : function(reactionSId,modifierOptions,model,view){
var reactionNode = model.mapReactionLayouts[reactionSId];
reactionNode.addModifier(modifierOptions);
model.updateReactionEdges(reactionNode.sId);
view.refresh();
return reactionSId;
},
removeModifier : function(reactionSId,modifierSId,model,view){
var reactionNode = model.mapReactionLayouts[reactionSId];
var returnThis = reactionNode.removeModifier(modifierSId);
model.updateReactionEdges(reactionNode.sId);
view.refresh();
return returnThis;
},
/**
* records drag event values in undo stack.
* @param {undoManager} undoManager active undoManager object to record this operatin on.
* @param {{sId:{iHeight:Number,iWidth:Number,position:{iX:Number,iY:Number}}}} beforeDrag [description]
* @param {{sId:{iHeight:Number,iWidth:Number,position:{iX:Number,iY:Number}}}} afterDrag [description]
* @return {} records drag event on provided undoManager.
* //IMPORTANT this is the method gets reference of undoManager. We avoid doing this.
* But here this operation is triggered by view entity which does not have access to operations object.
*/
recordDrag : function(undoManager,model,beforeDrag,afterDrag){
undoManager.add({
undo:function(){
model.applyDrag(beforeDrag);
resizer.clearResizer()
},
redo:function(){
model.applyDrag(afterDrag);
resizer.clearResizer()
}
})
eskinDispatch.undoManagerEvent(undoManager);
},
pasteSelection: function(toBePasted,model,view,keyStore){
}
}
/** Contains symbol path functions for various paths required in e skin **/
/** private symbols */
var customSymbolTypes = d3.map({
/**
* SIMPLECHEMICAL : returns the circle of passed dimension
*/
'SIMPLECHEMICAL': function(shapeObj) {
//size = shapeObj.iHeight||shapeObj.iWidth;
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
var topMiddle = {x:iWidth/2 ,y: 0},
bottomMiddle = {x: iWidth/2,y: iHeight},
xRadius = iWidth/2,
yRadius = iHeight/2;
return "M" + topMiddle.x + " " +topMiddle.y
+ "A " + xRadius + " "+ yRadius + " 0 0 0 "+bottomMiddle.x +" "+bottomMiddle.y
+ "A " + xRadius + " "+ yRadius + " 0 0 0 "+topMiddle.x +" "+topMiddle.y
;
},
/** GENERICPROTEIN : returns rounded rectangle **/
'GENERICPROTEIN': function(shapeObj) {
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
return shapeUtil.getRoundedRect(iHeight, iWidth);
},
/** GENE : returns rectangle of given dimensions **/
'GENE' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
return "M0 0"
+ "h" + iWidth
+ "v" + iHeight
+ "h" + -iWidth
+ "z";
},
/** RNA : returns rombus **/
'RNA' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
// Tilting edges factor 20% of the width.
//var shapeOffest = iWidth*shapeConstants.SPECIES_SHAPE_OFFSET;
var shapeOffest = iWidth*0.2;
var leftTop = {x: shapeOffest,y: 0},
midTop = {x: iWidth/2,y: shapeOffest},
rightTop = {x: iWidth,y: 0},
rightBottom = {x: iWidth-shapeOffest ,y: iHeight},
leftBottom = {x:0 ,y: iHeight};
return "M"+ leftTop.x + " "+leftTop.y
+ "L" + rightTop.x + " "+rightTop.y
+ "L" + rightTop.x + " "+rightTop.y
+ "L" + rightBottom.x + " "+rightBottom.y
+ "L" + leftBottom.x + " "+leftBottom.y
+ "L" + leftBottom.x + " "+leftBottom.y
+ "Z";
},
/** Receptor : returns Receptor shape **/
'RECEPTOR' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
// Tilting edges factor 20% of the width.
//var shapeOffest = iWidth*shapeConstants.SPECIES_SHAPE_OFFSET;
var shapeOffest = iWidth*0.2;
var leftTop = {x: 0,y: 0},
midTop = {x: iWidth/2,y: shapeOffest},
rightTop = {x: iWidth,y: 0},
rightBottom = {x: iWidth ,y: iHeight-shapeOffest},
midBottom = {x: iWidth/2 ,y: iHeight},
leftBottom = {x:0 ,y: iHeight-shapeOffest};
return "M"+ leftTop.x + " "+leftTop.y
+ "L" + midTop.x + " "+midTop.y
+ "L" + rightTop.x + " "+rightTop.y
+ "L" + rightBottom.x + " "+rightBottom.y
+ "L" + midBottom.x + " "+midBottom.y
+ "L" + leftBottom.x + " "+leftBottom.y
+ "Z";
},
/** PHENOTYPE : returns PHENOTYPE shape ( a hexagon) **/
'PHENOTYPE' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
// Tilting edges factor 20% of the width.
//var shapeOffest = iWidth*shapeConstants.SPECIES_SHAPE_OFFSET;
var shapeOffest = iWidth*0.2;
var leftMid = {x: 0,y: iHeight/2},
leftTop = {x: shapeOffest,y: 0},
rightTop = {x: iWidth - shapeOffest,y: 0},
rightMid = {x: iWidth ,y: iHeight / 2},
rightBottom = {x: iWidth - shapeOffest ,y: iHeight},
leftBottom = {x:shapeOffest ,y: iHeight};
return "M"+ leftMid.x + " "+leftMid.y
+ "L" + leftTop.x + " "+leftTop.y
+ "L" + rightTop.x + " "+rightTop.y
+ "L" + rightMid.x + " "+rightMid.y
+ "L" + rightBottom.x + " "+rightBottom.y
+ "L" + leftBottom.x + " "+leftBottom.y
+ "Z";
},
'PERTURBINGAGENT' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
// Tilting edges factor 20% of the width.
//var shapeOffest = iWidth*shapeConstants.SPECIES_SHAPE_OFFSET;
var shapeOffest = iWidth*0.2;
var leftTop = {x: 0,y: 0},
leftMid = {x: shapeOffest,y: iHeight/2},
leftBottom = {x: 0,y:iHeight},
rightBottom = {x: iWidth,y: iHeight},
rightMid = {x: iWidth-shapeOffest,y:iHeight/2 },
rightTop = {x: iWidth,y: 0};
return "M"+ leftTop.x + " "+leftTop.y
+ "L" + leftMid.x + " "+leftMid.y
+ "L" + leftBottom.x + " "+leftBottom.y
+ "L" + rightBottom.x + " "+rightBottom.y
+ "L" + rightMid.x + " "+rightMid.y
+ "L" + rightTop.x + " "+rightTop.y
+ "Z";
},
'SOURCEORSINK' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
// Tilting edges factor 20% of the width.
//var shapeOffest = iWidth*shapeConstants.SPECIES_SHAPE_OFFSET;
var rightTop = {x: iWidth,y: 0},
leftBottom = {x: 0,y: iHeight};
return getSymbol('SimpleChemical', shapeObj)
+ " M" + rightTop.x + " "+rightTop.y
+ "L" + leftBottom.x + " "+leftBottom.y
;
},
'LIGAND' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
return "M0 0"
+ "L" + iWidth + " 0"
+ "L" + iWidth/2 + " "+iWidth
+ "Z";
},
'TRANSCRIPTIONFACTOR' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
var hFactor = 2.5;
var lCenter = {x: iWidth / 4,y: iHeight / hFactor},
rCenter = {x: 3 * iWidth / 4 ,y: iHeight/hFactor};
var iRadius = iWidth / 4;
// return d3scomos.shapeUtil.getEllipse(lCenter.x,lCenter.y,iRadius,Math.ceil(iHeight / hFactor))
// + d3scomos.shapeUtil.getEllipse(rCenter.x,rCenter.y,iRadius,Math.ceil(iHeight / hFactor));
return d3scomos.shapeUtil.getEllipse(iHeight,iWidth/2,0,0)
+ d3scomos.shapeUtil.getEllipse(iHeight,iWidth/2,iWidth/2,0);
},
'ENZYME' : function(shapeObj){
var iHeight = shapeObj.iHeight - shapeObj.iHeight * 0.4;
var iWidth = shapeObj.iWidth;
var leftTop = {x: 0,y: 0},
rightTop = {x: iWidth,y: 0},
rightBottom = {x:iWidth,y: iHeight},
leftBottom = {x: 0,y: iHeight},
arcCenter ={x: iWidth/2,y: iHeight};
return "M"+ leftTop.x + " "+leftTop.y
+ "L" + rightTop.x + " "+rightTop.y
+ "L" + rightBottom.x + " "+rightBottom.y
+ "A " + iWidth/2 + " "+ iHeight/2 + " 0 0 1 "+leftBottom.x +" "+leftBottom.y
+ "Z";
},
'COMPLEX' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
//GENERIC_PROTIEN_RECT_ROUNDNESS_FACTOR
var radius = d3.min([iHeight,iWidth])*0.2;
return shapeUtil.getRoundedRect(iHeight,iWidth);
},
'REACTION' : function(shapeObj){
/** current imple does not respect passed dimensions **/
//var iHeight = shapeObj.iHeight;
//var iWidth = shapeObj.iWidth;
var iHeight = 20; //
var topMiddle = {x: iHeight/2,y: 0},
rightMiddle = {x: iHeight,y: iHeight/2},
bottomMiddle = {x: iHeight/2, y:iHeight},
leftMiddle = {x: 0, y:iHeight/2};
return "M"+ topMiddle.x + " "+topMiddle.y
+ "L" + rightMiddle.x + " "+rightMiddle.y
+ "L" + bottomMiddle.x + " "+bottomMiddle.y
+ "L" + leftMiddle.x + " "+leftMiddle.y
+ "Z";
}
/* new shape template
'shape' : function(shapeObj){
var iHeight = shapeObj.iHeight;
var iWidth = shapeObj.iWidth;
// Tilting edges factor 20% of the width.
//var shapeOffest = iWidth*shapeConstants.SPECIES_SHAPE_OFFSET;
var shapeOffest = iWidth*0.2;
var leftMid = {x: 0,y: 0},
leftTop = {x: 0,y: 0},
rightTop = {x: 0,y: 0},
rightMid = {x: 0,y: 0},
rightBottom = {x: 0,y: 0},
leftBottom = {x: 0,y: 0};
return
}*/
});
/** private function customSymbol
*
*/
var customSymbol = function(){
var type,
shapeObj;
function symbol(d,i) {
var customSymbol;
try {
customSymbol = customSymbolTypes.get(type.call(this,d,i))(shapeObj.call(this,d,i));
}
catch(err) {
console.log("invalid shape : "+type.call(this,d,i))
customSymbol = customSymbolTypes.get('GENE')(shapeObj.call(this,d,i));
console.log(customSymbol);
}
return customSymbol;
}
symbol.type = function(_) {
if (!arguments.length) return type;
type = d3.functor(_);
return symbol;
};
symbol.shapeObj = function(_) {
if (!arguments.length) return shapeObj;
shapeObj = d3.functor(_);
return symbol;
};
return symbol;
};
/** assumption : every passed object in shape must have following structure
* Object :
* iHeight : val,
* iWidth : val
*/
var getSymbol = d3scomos.getSymbol = function getSymbol(_type, shapeObj) {
/** for standard shapes provided by the d3 they are assumed to be square **/
shapeObj = shapeObj || {iHeight:128,iWidth:128};
//size in case referenced the d3 shape
var size = shapeObj.iHeight||shapeObj.iWidth; //both will be same in this case
//all shape names are in all caps
var type = "";
if(_type !=undefined) type = symbolTypeMappings[_type.replace(/ /g,'')]//eval('typeMappings["'+_type+'"]')//typeMappings[''+_type];
if (d3.svg.symbolTypes.indexOf(type) !== -1) {
return d3.svg.symbol().type(type).size(size)();
} else {
return customSymbol().type(type).shapeObj(shapeObj)();
}
}
var symbolTypeMappings = {
"SimpleChemical" :"SIMPLECHEMICAL",
"GenericProtein" :"GENERICPROTEIN",
"DNA(Gene)" :"GENE",
"RNA" :"RNA",
"Receptor" :"RECEPTOR",
"Phenotype" :"PHENOTYPE",
"PerturbingAgent" :"PERTURBINGAGENT",
"Source/Sink" :"SOURCEORSINK",
"Ligand" :"LIGAND",
"TranscriptionFactor":"TRANSCRIPTIONFACTOR",
"Enzyme" :"ENZYME",
"Complex" :"COMPLEX",
"REACTION" :"REACTION",
"InvalidMolecule(s)":"GENE",
"Rectangular" :"RECTANGULAR",
"Circular" :"CIRCULAR",
"General" :"GENERAL"
}
/** export d3scomos **/
if (typeof define === 'function' && define.amd) {
define("d3scomos", ["d3"], function () { return d3scomos; });
} else if ('undefined' !== typeof exports && 'undefined' !== typeof module) {
module.exports = d3scomos;
} else {
window.d3scomos = d3scomos;
}
})(window); |
var mongoose = require('mongoose');
var tagSchema = new mongoose.Schema({
tagName: { type: String, required: true },
dreams: { type: [mongoose.Schema.Types.ObjectId], ref: 'Dream' }
})
mongoose.model('Tag', tagSchema);
|
/* global requirejs */
requirejs.config({
baseUrl: '/javascripts/libs',
paths: {
app: '/javascripts',
jquery: '/bower_components/kendo-ui/js/jquery.min',
k: '/bower_components/kendo-ui/js',
templates: '/templates',
lodash: '/bower_components/lodash/dist/lodash.min'
},
shim: {
k: ['jquery'],
'jquery.easing': ['jquery']
},
waitSeconds: 600
});
|
export default {
name: "language",
title: "Language",
type: "document",
fields: [
{
name: "name",
title: "Name",
type: "string",
},
{
name: "filed",
title: "Filed",
type: "string",
},
{
name: "id",
title: "Id",
type: "number",
},
{
name: "mainImage",
title: "Main image",
type: "image",
options: {
hotspot: true,
},
},
],
};
|
var ng = {};
ng.a = angular.module('todoDomain', ['ngSanitize', 'angular-sortable-view']);
ng.a.config(function () {
}); |
import React from "react";
import "./Header.css";
import HomeIcon from "@material-ui/icons/Home";
import FlashOnIcon from "@material-ui/icons/FlashOn";
import LiveTvIcon from "@material-ui/icons/LiveTv";
import VideoLibraryIcon from "@material-ui/icons/VideoLibrary";
import SearchIcon from "@material-ui/icons/Search";
import PersonOutlineIcon from "@material-ui/icons/PersonOutline";
function Header() {
return (
<div className="header">
<div className="header__icons">
<div className="header__icon">
<HomeIcon />
<p className="icon__text header__icon--active">Home</p>
</div>
<div className="header__icon">
<FlashOnIcon />
<p className="icon__text">Trending</p>
</div>
<div className="header__icon">
<LiveTvIcon />
<p className="icon__text">Verified</p>
</div>
<div className="header__icon">
<VideoLibraryIcon />
<p className="icon__text">Collection</p>
</div>
<div className="header__icon">
<SearchIcon />
<p className="icon__text">Search</p>
</div>
<div className="header__icon">
<PersonOutlineIcon />
<p className="icon__text">Account</p>
</div>
</div>
<img
src="https://press.hulu.com/wp-content/uploads/2020/02/hulu-white.png"
alt="LOGO"
className="header__logo"
/>
</div>
);
}
export default Header;
|
import 'normalize.css';
import '../css/index.css'
import * as THREE from 'three';
import CANNON from 'cannon';
import Renderer from './engine/Renderer';
import Syncer from './engine/Syncer';
import User from './entities/User';
import Player from './entities/Player';
import Sun from './entities/Sun';
import Cube from './entities/Cube';
import objectCreator from './utils/objectGenerator';
const user = new User({
position: [1, 1, 1],
permissions: {
fly: true,
}
});
const sun = new Sun({
time: 1000,
mapSize: {
width: 1024 * 4,
height: 1024 * 4,
}
})
const renderer = new Renderer({ user, sun });
renderer.init(document.querySelector('#root'));
renderer.renderElement(new THREE.HemisphereLight(0xffffbb, 0x080820, 0.2));
renderer.renderElement(new THREE.AmbientLight( 0x808080 ));
const syncer = new Syncer(renderer);
for (var i = 0; i < 10; i++) {
const cube = new Cube({
size: [1, 1, 1],
position: [1, 0, i],
color: 'red',
mass: 0,
})
renderer.renderObject(cube)
}
const ground = objectCreator({
geometry: new THREE.PlaneGeometry(1024, 1024, 1024),
material: new THREE.MeshLambertMaterial({ side: THREE.DoubleSide }),
textureUrl: './textures/grass3.jpg',
rotation: [90, 0, 0],
position: [0, -0.501, 0],
params: {
receiveShadow: true,
},
})
renderer.renderElement(ground);
const groundShape = new CANNON.Plane();
const groundMaterial = new CANNON.Material();
groundMaterial.friction = 0;
const groundBody = new CANNON.Body({
mass: 0,
shape: groundShape,
material: groundMaterial,
});
groundBody.quaternion.setFromAxisAngle(new CANNON.Vec3(1,0,0),-Math.PI/2);
groundBody.position.set(0, -0.5, 0)
renderer.renderPhysic(groundBody);
syncer.sync();
// dev
window.renderer = renderer;
|
const fs = require('fs');
const path = require('path');
const Sequelize = require('sequelize');
const config = require('../config/config.js');
const db = {};
const sequelize = new Sequelize(
config.db.database,
config.db.user,
config.db.password,
config.db.options, {
define: {
charset: 'utf8mb4',
collation: 'cp1250_bin',
timestamps: true
}
}
);
fs
.readdirSync(__dirname)
.filter((file) =>
file !== 'index.js'
)
.forEach((file) => {
const model = sequelize.import(path.join(__dirname, file));
db[model.name] = model;
});
db.sequelize = sequelize;
db.Sequelize = Sequelize;
db.Client.hasMany(db.Ticket);
db.Ticket.belongsTo(db.Client);
db.Client.hasMany(db.Transfer);
db.Transfer.belongsTo(db.Client);
db.Client.hasOne(db.Plan);
db.Plan.belongsTo(db.Client);
db.Client.hasMany(db.Arrangement);
db.Arrangement.belongsTo(db.Client);
db.Plan.hasMany(db.Arrangement);
db.Arrangement.belongsTo(db.Plan);
db.Plan.hasMany(db.Ticket);
db.Ticket.belongsTo(db.Plan);
db.Plan.hasMany(db.Installment);
db.Installment.belongsTo(db.Plan);
db.Plan.hasMany(db.Transfer);
db.Transfer.belongsTo(db.Plan);
db.Arrangement.hasMany(db.Room);
db.Room.belongsTo(db.Arrangement);
db.Room.hasMany(db.PassangersInRoom);
db.PassangersInRoom.belongsTo(db.Passanger);
db.PassangersInRoom.belongsTo(db.Room);
db.Payment.belongsTo(db.Plan);
db.Plan.hasMany(db.Payment);
db.Ticket.belongsTo(db.Destination, {as: 'Destination', foreignKey: 'DestinationId'});
db.Destination.hasMany(db.Ticket, {as: 'TicketDestination', foreignKey: 'DestinationId'});
// db.Destination.hasMany(db.Ticket);
db.Ticket.belongsTo(db.Destination, {as: 'Arrival', foreignKey: 'ArrivalId'});
db.Destination.hasMany(db.Ticket, {as: 'TicketArrival', foreignKey: 'ArrivalId'});
// db.Destination.hasMany(db.Ticket, {as: 'Tickets'});
db.Destination.hasMany(db.Ticket, {as: 'Arrival'});
db.Ticket.belongsTo(db.Company, {as: 'Company'});
db.Passanger.hasMany(db.PassangersTicket);
db.Ticket.hasMany(db.PassangersTicket);
db.PassangersTicket.belongsTo(db.Passanger);
db.PassangersTicket.belongsTo(db.Client, {as: 'ClientPassanger'});
db.PassangersTicket.belongsTo(db.Ticket);
db.Passanger.hasMany(db.PassangersArrangement);
db.Client.hasMany(db.PassangersArrangement);
db.Arrangement.hasMany(db.PassangersArrangement);
db.PassangersArrangement.belongsTo(db.Passanger);
db.PassangersArrangement.belongsTo(db.Client, {as: 'ClientPassanger'});
db.PassangersArrangement.belongsTo(db.Arrangement);
// Arrangement Foreign Key Relations
db.Arrangement.belongsTo(db.Destination, {as: 'Destination', foreignKey: 'DestinationId'});
db.Destination.hasMany(db.Arrangement, {as: 'ArrangementDestination', foreignKey: 'DestinationId'});
db.Arrangement.belongsTo(db.Destination, {as: 'Depart', foreignKey: 'DepartId'});
db.Arrangement.belongsTo(db.Hotel);
db.Arrangement.belongsTo(db.Agent);
db.Arrangement.belongsTo(db.Memorandum);
db.Memorandum.hasOne(db.Memorandum);
db.Ticket.belongsTo(db.Bill);
// db.Arrangement.belongsTo(db.Destination, {as: 'Arrival'});
db.Arrangement.belongsTo(db.Picklist, {as: 'Service'});
db.Arrangement.belongsTo(db.Picklist, {as: 'Type'});
// Room Foreign Key Relations
db.Room.belongsTo(db.Picklist, {as: 'RoomType'});
db.Room.belongsTo(db.Picklist, {as: 'RoomContent'});
// Group Arrangement
db.GroupArrangement.hasMany(db.Arrangement);
db.Arrangement.belongsTo(db.GroupArrangement);
module.exports = db;
|
module.exports = function(app) {
require(__dirname + '/header')(app)
}
|
require('../lib/config');
var Redis = require('../lib/util/redis');
global.redis = {
_connection: null,
connect: function() {
this._connection = Redis.connect();
},
disconnect: function() {
this._connection.quit();
},
sets: function(k, v) {
this._connection.sets(k, v, function(err, created, state, expire) {
if (err) return console.log(err);
console.log('Updated: ' + !!updated + ', CAS: ' + state + ', Expires: ' + expires);
});
},
gets: function(k, v) {
this._connection.gets(k, function(err, data, state, expire) {
if (err) return console.log(err);
console.log('CAS: ' + state + ', Expires: ' + expires + ', Data:');
console.log(data);
});
},
cas: function(k, v, state, expire) {
this._connection.cas(k, v, state, expire, function(err, updated, state, expire) {
if (err) return console.log(err);
console.log('Updated: ' + !!updated + ', CAS: ' + state + ', Expires: ' + expires);
});
},
expires: function(k, expires) {
this._connection.expires(k, expires, function(err, updated, state, expire) {
if (err) return console.log(err);
console.log('Updated: ' + !!updated + ', CAS: ' + state + ', Expires: ' + expires);
});
},
dels: function(k) {
this._connection.dels(k, function(err, deleted) {
if (err) return console.log(err);
console.log('Deleted: ' + !!deleted);
});
},
};
|
(function () {
angular
.module('myApp')
.controller('FeedbackAnswer2Controller', FeedbackAnswer2Controller)
FeedbackAnswer2Controller.$inject = ['$state', '$scope', '$rootScope'];
function FeedbackAnswer2Controller($state, $scope, $rootScope) {
$rootScope.setData('showMenubar', true);
$rootScope.setData('backUrl', "feedbackAnswer1");
$scope.question = $rootScope.settings.questionObj;
$scope.qtype = $scope.qtype2 = $rootScope.settings.qtype;
if ($scope.qtype == 2) {
$scope.qtype2 = 0
}
$scope.feedbackquestions = $rootScope.settings.feedqts;
if ($scope.feedbackquestions) {
$scope.scalehide = 0;
} else {
$scope.scalehide = 1;
}
$scope.progresskey = true;
var uid = $rootScope.settings.userId;
$rootScope.safeApply();
$scope.$on('$destroy', function () {
if ($scope.feedbackSettingRef) $scope.feedbackSettingRef.off('value')
if ($scope.answerRef) $scope.answerRef.off('value')
})
$scope.init = function () {
$scope.getFeedbackSetting();
$scope.myfeedbackscore();
}
$scope.getFeedbackSetting = function () {
$scope.feedbackSetting = {
studentRate: 100,
teacherRate: 0,
}
$scope.feedbackSettingRef = firebase.database().ref('Questions/' + $scope.question.code + '/teacherFeedback/' + $rootScope.settings.groupKey + '/data');
$scope.feedbackSettingRef.on('value', function (snapshot) {
if (snapshot.val()) {
$scope.feedbackSetting = snapshot.val();
$rootScope.safeApply();
}
})
}
$scope.myfeedbackscore = function () {
$scope.viewfeedbtn = true;
$scope.userType = 'student';
$scope.selectedKey = {
student: undefined,
teacher: undefined
}
$scope.selectedIndex = {
student: undefined,
teacher: undefined
}
$scope.totalScore = 0;
$scope.answerRef = firebase.database().ref('NewAnswers/' + $rootScope.settings.questionKey + '/answer/' + uid);
$scope.answerRef.on('value', function (snapshot) {
$scope.Feedbacks = {
teacher: [],
student: []
}
var answer = snapshot.val();
for (var userKey in answer.Feedbacks) {
answer.Feedbacks[userKey].key = userKey;
$scope.Feedbacks[answer.Feedbacks[userKey].userType].push(answer.Feedbacks[userKey]);
}
$scope.totalAwardScore = 0;
$scope.awardScoreCount = 0;
for (key in answer.awardScore) {
$scope.totalAwardScore += answer.awardScore[key];
$scope.awardScoreCount++;
}
$scope.selectFeedback();
$scope.getTotalScore();
$scope.progresskey = false;
$scope.viewfeedbtn = false;
$rootScope.safeApply();
});
}
$scope.selectFeedback = function () {
var feedbacks = $scope.Feedbacks[$scope.userType];
if (feedbacks.length == 0) {
$scope.selectedKey[$scope.userType] = undefined;
$scope.selectedIndex[$scope.userType] = undefined;
$rootScope.warning("There isn't any " + $scope.userType + " feedback data!");
} else {
if ($scope.selectedKey[$scope.userType]) {
$scope.selectedIndex[$scope.userType] = 0
for (var i = 0; i < feedbacks.length; i++) {
if (feedbacks.key == $scope.selectedKey[$scope.userType]) {
$scope.selectedIndex[$scope.userType] = i;
break;
}
}
} else {
$scope.selectedKey[$scope.userType] = feedbacks[0].key;
$scope.selectedIndex[$scope.userType] = 0;
}
}
$rootScope.safeApply();
}
$scope.prevfeedback = function () {
var feedbacks = $scope.Feedbacks[$scope.userType];
if (feedbacks.length == 0) {
$scope.selectedKey[$scope.userType] = undefined;
$scope.selectedIndex[$scope.userType] = undefined;
$rootScope.warning("There isn't any " + $scope.userType + " feedback data!");
} else {
if ($scope.selectedIndex[$scope.userType] > 0) {
$scope.selectedIndex[$scope.userType]--;
$scope.selectedKey[$scope.userType] = feedbacks[$scope.selectedIndex[$scope.userType]].key;
} else {
$rootScope.info("This is first " + $scope.userType + " feedback!");
}
}
$rootScope.safeApply();
}
$scope.nextfeedback = function () {
var feedbacks = $scope.Feedbacks[$scope.userType];
if (feedbacks.length == 0) {
$scope.selectedKey[$scope.userType] = undefined;
$scope.selectedIndex[$scope.userType] = undefined;
$rootScope.warning("There isn't any " + $scope.userType + " feedback data!");
} else {
if ($scope.selectedIndex[$scope.userType] < feedbacks.length - 1) {
$scope.selectedIndex[$scope.userType]++;
$scope.selectedKey[$scope.userType] = feedbacks[$scope.selectedIndex[$scope.userType]].key;
} else {
$rootScope.info("This is last " + $scope.userType + " feedback!");
}
}
$rootScope.safeApply();
}
$scope.getTotalScore = function () {
var studentCount = 0
var teacherCount = 0
var studentTotalScore = 0
var teacherTotalScore = 0
$scope.Feedbacks.student.forEach(feedback => {
if (feedback.score) {
studentCount++
feedback.score.forEach(score => {
studentTotalScore += score
});
}
studentTotalScore = studentTotalScore / studentCount / $scope.feedbackquestions.length
});
$scope.Feedbacks.teacher.forEach(feedback => {
if (feedback.score) {
teacherCount++
feedback.score.forEach(score => {
teacherTotalScore += score
});
}
teacherTotalScore = teacherTotalScore / teacherCount / $scope.feedbackquestions.length
});
var tempStRate = 0;
var tempTeRate = 0;
if (studentCount > 0) {
if (teacherCount > 0) {
tempStRate = $scope.feedbackSetting.studentRate;
tempTeRate = $scope.feedbackSetting.teacherRate;
} else {
tempStRate = 100
}
} else {
if (teacherCount > 0) {
tempTeRate = 100
}
}
$scope.totalScore = studentTotalScore * tempStRate / 100 + teacherTotalScore * tempTeRate / 100
$scope.totalScore = Math.round($scope.totalScore * 10) / 10
}
$scope.gotoNext = function () {
if ($rootScope.settings.disabledQuestion) {
$rootScope.warning('This question is disabled to see answer now.');
} else {
$state.go('viewFeedbacks');
}
}
}
})(); |
"use strict";
const {Router} = require(`express`);
const {HttpCode} = require(`~/constants`);
const {
routeParamsValidator,
articleExist,
articleValidator,
commentValidator,
} = require(`~/service/middlewares`);
module.exports = (app, service, commentService) => {
const route = new Router();
app.use(`/articles`, route);
/**
* Статья
*/
route.get(`/`, async (req, res) => {
const {userId, offset, limit, withComments} = req.query;
let result;
if (limit || offset) {
result = await service.findPage({limit, offset, withComments});
} else {
result = await service.findAll({
userId,
withComments,
});
}
return res.status(HttpCode.OK).json(result);
});
route.get(`/popular`, async (req, res) => {
const {limit} = req.query;
const articles = await service.findMostCommented({limit});
return res.status(HttpCode.OK).json(articles);
});
route.get(`/:articleId`,
[routeParamsValidator, articleExist(service)],
(req, res) => {
const {article} = res.locals;
return res.status(HttpCode.OK).json(article);
});
route.post(`/`, articleValidator, async (req, res) => {
const article = await service.create(req.body);
return res.status(HttpCode.CREATED).json(article);
});
route.put(
`/:articleId`,
[
routeParamsValidator,
articleExist(service),
articleValidator,
],
async (req, res) => {
const {articleId} = req.params;
const updated = await service.update(articleId, req.body);
if (!updated) {
return res
.status(HttpCode.NOT_FOUND)
.send(`Article #${articleId} wasn't found`);
}
return res.status(HttpCode.OK).json(`Offer was updated`);
}
);
route.delete(`/:articleId`,
[routeParamsValidator, articleExist(service)],
async (req, res) => {
const {params, body} = req;
const {articleId: id} = params;
const {userId} = body;
const deletedOffer = await service.drop({
id,
userId,
});
if (!deletedOffer) {
return res
.status(HttpCode.NOT_FOUND)
.send(`Article #${id} wasn't found`);
}
return res.status(HttpCode.OK).json(deletedOffer);
});
/**
* Комментарии к статье
*/
route.post(
`/:articleId/comments`,
[articleExist(service), commentValidator],
async (req, res) => {
const {params, body} = req;
const {articleId} = params;
const {user, text} = body;
const io = req.app.locals.socketio;
const comment = await commentService.create(articleId, {
userId: user.id,
text,
});
io.emit(`comment:create`, {
id: comment.id,
text,
articleId,
user,
});
return res.status(HttpCode.CREATED).json(comment);
}
);
route.get(`/:articleId/comments`,
[routeParamsValidator, articleExist(service)],
async (req, res) => {
const {articleId} = req.params;
const comments = await commentService.findAllByArticleId(
articleId
);
return res.status(HttpCode.OK).json(comments);
});
route.delete(
`/:articleId/comments/:commentId`,
[routeParamsValidator, articleExist(service)],
async (req, res) => {
const {params, body} = req;
const {articleId, commentId} = params;
const {userId} = body;
const deletedComment = await commentService.drop({
articleId,
commentId,
userId,
});
if (!deletedComment) {
return res
.status(HttpCode.NOT_FOUND)
.send(`Comment with ${commentId} wasn't found`);
}
return res.status(HttpCode.OK).json(deletedComment);
}
);
};
|
describe('Hello Github Packages', () => {
it('Should Load Package Registry by Github', () => {
const HelloGithubPackages = require('@guilouro/hello-github-packages')
expect(HelloGithubPackages.Hi()).toBe('Github Packages works fine!')
})
}) |
import Vue from 'vue'
import App from './App.vue'
import './registerServiceWorker'
import router from './router'
import Buefy from 'buefy'
import 'buefy/dist/buefy.css'
Vue.use(Buefy)
Vue.config.productionTip = false
Vue.prototype.$vuescrollConfig = {
mode: 'slide',
bar: {
background: '#000'
}
};
new Vue({
router,
render: h => h(App)
}).$mount('#app') |
/* @flow */
'use strict';
import type { Path } from '../drawing/Path';
import type { BoundCurves } from '../Bounds';
import type ResourceLoader, { ImageElement } from '../ResourceLoader';
import type { Border } from './border';
import type { Padding } from './padding';
import Color from '../Color';
import Length from '../Length';
import Size from '../drawing/Size';
import Vector from '../drawing/Vector';
import {
calculateBorderBoxPath,
calculatePaddingBoxPath,
calculatePaddingBox,
Bounds
} from '../Bounds';
import { PADDING_SIDES } from './padding';
export type Background = {
backgroundImage: Array<BackgroundImage>,
backgroundClip: BackgroundClip,
backgroundColor: Color,
backgroundOrigin: BackgroundOrigin
};
export type BackgroundClip = $Values<typeof BACKGROUND_CLIP>;
export type BackgroundOrigin = $Values<typeof BACKGROUND_ORIGIN>;
export type BackgroundRepeat = $Values<typeof BACKGROUND_REPEAT>;
export type BackgroundSizeTypes = $Values<typeof BACKGROUND_SIZE>;
export type BackgroundSource = {
prefix: string,
method: string,
args: Array<string>
};
export type BackgroundImage = {
source: BackgroundSource,
position: [Length, Length],
size: [BackgroundSize, BackgroundSize],
repeat: BackgroundRepeat
};
export const BACKGROUND_REPEAT = {
REPEAT: 0,
NO_REPEAT: 1,
REPEAT_X: 2,
REPEAT_Y: 3
};
export const BACKGROUND_SIZE = {
AUTO: 0,
CONTAIN: 1,
COVER: 2,
LENGTH: 3
};
export const BACKGROUND_CLIP = {
BORDER_BOX: 0,
PADDING_BOX: 1,
CONTENT_BOX: 2
};
export const BACKGROUND_ORIGIN = BACKGROUND_CLIP;
const AUTO = 'auto';
class BackgroundSize {
size: ?BackgroundSizeTypes;
value: ?Length;
constructor(size: string) {
switch (size) {
case 'contain':
this.size = BACKGROUND_SIZE.CONTAIN;
break;
case 'cover':
this.size = BACKGROUND_SIZE.COVER;
break;
case 'auto':
this.size = BACKGROUND_SIZE.AUTO;
break;
default:
this.value = new Length(size);
}
}
}
export const calculateBackgroundSize = (
backgroundImage: BackgroundImage,
image: ImageElement,
bounds: Bounds
): Size => {
let width = image.width; //HuyHQ fix bug width height be 0
let height = image.height; //HuyHQ fix bug width height be 0
const size = backgroundImage.size;
if (size[0].size === BACKGROUND_SIZE.CONTAIN || size[0].size === BACKGROUND_SIZE.COVER) {
const targetRatio = bounds.width / bounds.height;
const currentRatio = image.width / image.height;
return targetRatio < currentRatio !== (size[0].size === BACKGROUND_SIZE.COVER)
? new Size(bounds.width, bounds.width / currentRatio)
: new Size(bounds.height * currentRatio, bounds.height);
}
if (size[0].value) {
width = size[0].value.getAbsoluteValue(bounds.width);
}
if (size[0].size === BACKGROUND_SIZE.AUTO && size[1].size === BACKGROUND_SIZE.AUTO) {
height = image.height;
} else if (size[1].size === BACKGROUND_SIZE.AUTO) {
height = width / image.width * image.height;
} else if (size[1].value) {
height = size[1].value.getAbsoluteValue(bounds.height);
}
if (size[0].size === BACKGROUND_SIZE.AUTO) {
width = height / image.height * image.width;
}
return new Size(width, height);
};
export const calculateGradientBackgroundSize = (
backgroundImage: BackgroundImage,
bounds: Bounds
): Size => {
const size = backgroundImage.size;
const width = size[0].value ? size[0].value.getAbsoluteValue(bounds.width) : bounds.width;
const height = size[1].value
? size[1].value.getAbsoluteValue(bounds.height)
: size[0].value ? width : bounds.height;
return new Size(width, height);
};
const AUTO_SIZE = new BackgroundSize(AUTO);
export const calculateBackgroungPaintingArea = (
curves: BoundCurves,
clip: BackgroundClip
): Path => {
switch (clip) {
case BACKGROUND_CLIP.BORDER_BOX:
return calculateBorderBoxPath(curves);
case BACKGROUND_CLIP.PADDING_BOX:
default:
return calculatePaddingBoxPath(curves);
}
};
export const calculateBackgroungPositioningArea = (
backgroundOrigin: BackgroundOrigin,
bounds: Bounds,
padding: Padding,
border: Array<Border>
): Bounds => {
const paddingBox = calculatePaddingBox(bounds, border);
switch (backgroundOrigin) {
case BACKGROUND_ORIGIN.BORDER_BOX:
return bounds;
case BACKGROUND_ORIGIN.CONTENT_BOX:
const paddingLeft = padding[PADDING_SIDES.LEFT].getAbsoluteValue(bounds.width);
const paddingRight = padding[PADDING_SIDES.RIGHT].getAbsoluteValue(bounds.width);
const paddingTop = padding[PADDING_SIDES.TOP].getAbsoluteValue(bounds.width);
const paddingBottom = padding[PADDING_SIDES.BOTTOM].getAbsoluteValue(bounds.width);
return new Bounds(
paddingBox.left + paddingLeft,
paddingBox.top + paddingTop,
paddingBox.width - paddingLeft - paddingRight,
paddingBox.height - paddingTop - paddingBottom
);
case BACKGROUND_ORIGIN.PADDING_BOX:
default:
return paddingBox;
}
};
export const calculateBackgroundPosition = (
position: [Length, Length],
size: Size,
bounds: Bounds
): Vector => {
return new Vector(
position[0].getAbsoluteValue(bounds.width - size.width),
position[1].getAbsoluteValue(bounds.height - size.height)
);
};
export const calculateBackgroundRepeatPath = (
background: BackgroundImage,
position: Vector,
size: Size,
backgroundPositioningArea: Bounds,
bounds: Bounds
) => {
const repeat = background.repeat;
switch (repeat) {
case BACKGROUND_REPEAT.REPEAT_X:
return [
new Vector(
Math.round(bounds.left),
Math.round(backgroundPositioningArea.top + position.y)
),
new Vector(
Math.round(bounds.left + bounds.width),
Math.round(backgroundPositioningArea.top + position.y)
),
new Vector(
Math.round(bounds.left + bounds.width),
Math.round(size.height + backgroundPositioningArea.top + position.y)
),
new Vector(
Math.round(bounds.left),
Math.round(size.height + backgroundPositioningArea.top + position.y)
)
];
case BACKGROUND_REPEAT.REPEAT_Y:
return [
new Vector(
Math.round(backgroundPositioningArea.left + position.x),
Math.round(bounds.top)
),
new Vector(
Math.round(backgroundPositioningArea.left + position.x + size.width),
Math.round(bounds.top)
),
new Vector(
Math.round(backgroundPositioningArea.left + position.x + size.width),
Math.round(bounds.height + bounds.top)
),
new Vector(
Math.round(backgroundPositioningArea.left + position.x),
Math.round(bounds.height + bounds.top)
)
];
case BACKGROUND_REPEAT.NO_REPEAT:
return [
new Vector(
Math.round(backgroundPositioningArea.left + position.x),
Math.round(backgroundPositioningArea.top + position.y)
),
new Vector(
Math.round(backgroundPositioningArea.left + position.x + size.width),
Math.round(backgroundPositioningArea.top + position.y)
),
new Vector(
Math.round(backgroundPositioningArea.left + position.x + size.width),
Math.round(backgroundPositioningArea.top + position.y + size.height)
),
new Vector(
Math.round(backgroundPositioningArea.left + position.x),
Math.round(backgroundPositioningArea.top + position.y + size.height)
)
];
default:
return [
new Vector(Math.round(bounds.left), Math.round(bounds.top)),
new Vector(Math.round(bounds.left + bounds.width), Math.round(bounds.top)),
new Vector(
Math.round(bounds.left + bounds.width),
Math.round(bounds.height + bounds.top)
),
new Vector(Math.round(bounds.left), Math.round(bounds.height + bounds.top))
];
}
};
export const parseBackground = (
style: CSSStyleDeclaration,
resourceLoader: ResourceLoader
): Background => {
return {
backgroundColor: new Color(style.backgroundColor),
backgroundImage: parseBackgroundImages(style, resourceLoader),
backgroundClip: parseBackgroundClip(style.backgroundClip),
backgroundOrigin: parseBackgroundOrigin(style.backgroundOrigin)
};
};
const parseBackgroundClip = (backgroundClip: string): BackgroundClip => {
switch (backgroundClip) {
case 'padding-box':
return BACKGROUND_CLIP.PADDING_BOX;
case 'content-box':
return BACKGROUND_CLIP.CONTENT_BOX;
}
return BACKGROUND_CLIP.BORDER_BOX;
};
const parseBackgroundOrigin = (backgroundOrigin: string): BackgroundOrigin => {
switch (backgroundOrigin) {
case 'padding-box':
return BACKGROUND_ORIGIN.PADDING_BOX;
case 'content-box':
return BACKGROUND_ORIGIN.CONTENT_BOX;
}
return BACKGROUND_ORIGIN.BORDER_BOX;
};
const parseBackgroundRepeat = (backgroundRepeat: string): BackgroundRepeat => {
switch (backgroundRepeat.trim()) {
case 'no-repeat':
return BACKGROUND_REPEAT.NO_REPEAT;
case 'repeat-x':
case 'repeat no-repeat':
return BACKGROUND_REPEAT.REPEAT_X;
case 'repeat-y':
case 'no-repeat repeat':
return BACKGROUND_REPEAT.REPEAT_Y;
case 'repeat':
return BACKGROUND_REPEAT.REPEAT;
}
if (__DEV__) {
console.error(`Invalid background-repeat value "${backgroundRepeat}"`);
}
return BACKGROUND_REPEAT.REPEAT;
};
const parseBackgroundImages = (
style: CSSStyleDeclaration,
resourceLoader: ResourceLoader
): Array<BackgroundImage> => {
const sources: Array<BackgroundSource> = parseBackgroundImage(
style.backgroundImage
).map(backgroundImage => {
if (backgroundImage.method === 'url') {
const key = resourceLoader.loadImage(backgroundImage.args[0]);
backgroundImage.args = key ? [key] : [];
}
return backgroundImage;
});
const positions = style.backgroundPosition.split(',');
const repeats = style.backgroundRepeat.split(',');
const sizes = style.backgroundSize.split(',');
return sources.map((source, index) => {
const size = (sizes[index] || AUTO).trim().split(' ').map(parseBackgroundSize);
const position = (positions[index] || AUTO).trim().split(' ').map(parseBackgoundPosition);
return {
source,
repeat: parseBackgroundRepeat(
typeof repeats[index] === 'string' ? repeats[index] : repeats[0]
),
size: size.length < 2 ? [size[0], AUTO_SIZE] : [size[0], size[1]],
position: position.length < 2 ? [position[0], position[0]] : [position[0], position[1]]
};
});
};
const parseBackgroundSize = (size: string): BackgroundSize =>
size === 'auto' ? AUTO_SIZE : new BackgroundSize(size);
const parseBackgoundPosition = (position: string): Length => {
switch (position) {
case 'bottom':
case 'right':
return new Length('100%');
case 'left':
case 'top':
return new Length('0%');
case 'auto':
return new Length('0');
}
return new Length(position);
};
export const parseBackgroundImage = (image: string): Array<BackgroundSource> => {
const whitespace = /^\s$/;
const results = [];
let args = [];
let method = '';
let quote = null;
let definition = '';
let mode = 0;
let numParen = 0;
const appendResult = () => {
let prefix = '';
if (method) {
if (definition.substr(0, 1) === '"') {
definition = definition.substr(1, definition.length - 2);
}
if (definition) {
args.push(definition.trim());
}
const prefix_i = method.indexOf('-', 1) + 1;
if (method.substr(0, 1) === '-' && prefix_i > 0) {
prefix = method.substr(0, prefix_i).toLowerCase();
method = method.substr(prefix_i);
}
method = method.toLowerCase();
if (method !== 'none') {
results.push({
prefix,
method,
args
});
}
}
args = [];
method = definition = '';
};
image.split('').forEach(c => {
if (mode === 0 && whitespace.test(c)) {
return;
}
switch (c) {
case '"':
if (!quote) {
quote = c;
} else if (quote === c) {
quote = null;
}
break;
case '(':
if (quote) {
break;
} else if (mode === 0) {
mode = 1;
return;
} else {
numParen++;
}
break;
case ')':
if (quote) {
break;
} else if (mode === 1) {
if (numParen === 0) {
mode = 0;
appendResult();
return;
} else {
numParen--;
}
}
break;
case ',':
if (quote) {
break;
} else if (mode === 0) {
appendResult();
return;
} else if (mode === 1) {
if (numParen === 0 && !method.match(/^url$/i)) {
args.push(definition.trim());
definition = '';
return;
}
}
break;
}
if (mode === 0) {
method += c;
} else {
definition += c;
}
});
appendResult();
return results;
};
|
const oddArray = [1, 3, 5, 7, 9, 11, 13];
test('should start correctly', () => {
expect(oddArray).toContain(1);
expect(oddArray).toContain(3);
expect(oddArray).toContain(5);
expect(oddArray).toContain(7);
expect(oddArray).toContain(9);
});
|
import React from "react";
import Game from "../../ticTacToe/classes.js";
class TicTacToe extends React.Component {
constructor(props) {
super(props);
this.state = {
board: new Game.Board(),
player: 1,
difficulty: 'easy'
}
this.togglePlayer = this.togglePlayer.bind(this);
this.spaceClick = this.spaceClick.bind(this);
this.renderPiece = this.renderPiece.bind(this);
}
componentDidMount() {
}
togglePlayer() {
let currentPlayer = this.state.player;
this.setState({
player: (3 - currentPlayer)
})
}
spaceClick(e) {
let space = parseInt(e.target.id);
if (this.state.board.boardValues[space] === 0) {
let board = this.state.board.boardValues;
board[space] = this.state.player;
this.setState({
board: this.state.board,
player: 3 - this.state.player
}, () => {
// console.log(this.state.board, this.state.player)
// let newBoard = Game.MonteCarloTreeSearch.findNextMove(this.state.board, this.state.player);
let winStatus = this.state.board.checkStatus();
console.log(winStatus);
if (winStatus === -1) {
let newBoard = Game.MonteCarloTreeSearch.findNextMove(this.state.board, this.state.player, 2);
console.log(newBoard);
this.setState({
board: newBoard,
player: 3 - this.state.player
})
}
// this.setState({
// board: newBoard
// })
});
} else {
alert('illegal move');
}
}
renderPiece(p) {
if (p === 1) {
return 'X'
} else if (p === 2) {
return 'O'
}
}
render() {
console.log(this.state)
return (
<div>
<div className="container">
<div className = "ticTacToe">
<div className="gameHeader">
<div className="title">
<h5> Tic Tac Toe </h5>
</div>
<select className="difficulty">
<option value="easy">Easy</option>
<option value="medium">Medium</option>
<option value="hard">Hard</option>
<option value="ai vs ai">AI vs AI</option>
</select>
</div>
<div className = "board">
<div className="board-container">
<div className="board-item" id="0" ref="0" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[0])}</div>
<div className="board-item" id="1" ref="1" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[1])}</div>
<div className="board-item" id="2" ref="2" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[2])}</div>
</div>
<div className="board-container">
<div className="board-item" id="3" ref="3" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[3])}</div>
<div className="board-item" id="4" ref="4" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[4])}</div>
<div className="board-item" id="5" ref="5" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[5])}</div>
</div>
<div className="board-container">
<div className="board-item" id="6" ref="6" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[6])}</div>
<div className="board-item" id="7" ref="7" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[7])}</div>
<div className="board-item" id="8" ref="8" onClick={this.spaceClick}>{this.renderPiece(this.state.board.boardValues[8])}</div>
</div>
</div>
</div>
</div>
</div>
)
}
}
export default TicTacToe; |
import React from 'react';
import LoginForm from '../../components/LoginForm';
import SignupForm from '../../components/SignupForm';
import ForgotPasswordForm from '../../components/ForgotPasswordForm';
import {
StyledSection,
StyledForm,
StyledButton,
StyledText,
StyledForgotPasswordButton,
StyledLink,
StyledWarning,
StyledInforming
} from './styles';
const LoginContainer = ({ pathname }) => {
let form;
switch (pathname) {
case '/login':
form = (
<LoginForm
StyledForm={StyledForm}
StyledButton={StyledButton}
StyledText={StyledText}
StyledForgotPasswordButton={StyledForgotPasswordButton}
StyledLink={StyledLink}
StyledWarning={StyledWarning}
/>
);
break;
case '/signup':
form = (
<SignupForm
StyledForm={StyledForm}
StyledButton={StyledButton}
StyledText={StyledText}
StyledLink={StyledLink}
StyledWarning={StyledWarning}
StyledInforming={StyledInforming}
/>
);
break;
case '/forgotPassword':
form = (
<ForgotPasswordForm
StyledForm={StyledForm}
StyledButton={StyledButton}
StyledText={StyledText}
StyledInforming={StyledInforming}
/>
);
break;
default:
form = null;
break;
}
return <StyledSection>{form}</StyledSection>;
};
export default LoginContainer;
|
$(document).ready(function () {
Cargar();
$(function () {
$("#productonombre").on('input', function () {
var val = this.value;
if ($('#productolist').find('option').filter(function () {
return this.value.toUpperCase() === val.toUpperCase();
}).length) {
var abc = $("#productolist option[value='" + $('#productonombre').val() + "']").attr('data-id');
$("#idingrediente").val(abc);
}
});
});
$(function () {
$("#unidadnombre").on('input', function () {
var val = this.value;
if ($('#unidadlist').find('option').filter(function () {
return this.value.toUpperCase() === val.toUpperCase();
}).length) {
var abc = $("#unidadlist option[value='" + $('#unidadnombre').val() + "']").attr('data-id');
$("#idunidad").val(abc);
}
});
});
});
function Cargar() {
var tabladatos = $('#datos');
var idproducto = $('#Idproducto').val();
var route = "/listaconunidadyingredientes/" + idproducto;
$('#datos').empty();
$.get(route, function (res) {
$(res).each(function (key, value) {
tabladatos.append("<tr>" +
"<td> " + value.nombre + " </td>" +
"<td> " + value.descripcion + " </td>" +
"<td>" + value.abreviatura + "</td>" +
"<td>" + value.cantidad + "</td>" +
"<td>" + value.costo + "</td>" +
"<td>" +
"<button value=" + value.eliminar + " OnClick='Mostrar(this);' class='btn-floating waves-effect waves-light btn modal-trigger' href='#modal10' title='Editar'>" +
"<i class='material-icons'>mode_edit</i>" +
"</button>" +
"</td><td>" +
"<button class='btn btn-floating' value=" + value.eliminar + " OnClick='Eliminar(this);' title='Eliminar'>" +
"<i class='material-icons'>delete</i>" +
"</button>" +
"</td>" +
"</tr>");
$('.modal-trigger').leanModal();
document.getElementById('total').innerHTML = value.total;
});
});
}
function Mostrar(btn) {
var route = "/editardetalleingrediente/" + btn.value;
$.get(route, function (res) {
$(res).each(function (key, value) {
$("#id").val(value.eliminar);
document.getElementById('ingredientelabel').innerHTML = value.elingrediente;
$("#unidad").val(value.numunidada);
$("#unidad").material_select();
$("#cantidad").val(value.cantidad);
$("#Costoactuaa").val(value.costo);
});
});
}
function limpiarcampo() {
$('#nuevacantidad').val("");
$('#costo').val("");
$('#productonombre').val("");
$("#unidadnombre").val("");
}
$("#guardar").click(function () {
var id = $('#Idproducto').val();
var idIngrediente = $('#idingrediente').val();
var idUnidadMedida = $('#idunidad').val();
var cantidad = $('#nuevacantidad').val();
var costo = $('#costo').val();
if (!idIngrediente || !idIngrediente.trim().length) {
return Materialize.toast('Ingrediente Vacio', 1000, 'rounded');
}
if (!idUnidadMedida || !idUnidadMedida.trim().length) {
return Materialize.toast('Unidad de Medida Vacio', 1000, 'rounded');
}
if (!cantidad || !cantidad.trim().length) {
return Materialize.toast('Cantidad Vacia', 1000, 'rounded');
}
if (!costo || !costo.trim().length) {
return Materialize.toast('Costo Vacio', 1000, 'rounded');
}
var route = "/Ingredienteproducto";
var token = $("#token").val();
$.ajax({
url: route,
headers: {'X-CSRF-TOKEN': token},
type: 'POST',
dataType: 'json',
data: {
id: id,
idIngrediente: idIngrediente,
idUnidadMedida: idUnidadMedida,
cantidad: cantidad,
costo: costo
},
success: function () {
Cargar();
limpiarcampo();
swal({title: "Guardado Exitosamente",
type: "success",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
}, error: function () {
swal({title: "Ya existe el ingrediente",
type: "error",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
}
});
});
function Eliminar(btn) {
var route = "/Ingredienteproducto/" + btn.value + "";
var token = $("#token").val();
swal({title: "ESTA SEGURO QUE DESEA ELIMINAR EL INGREDIENTE?",
type: "warning",
showCancelButton: true,
confirmButtonColor: "#DD6B55",
confirmButtonText: "Si, eliminarlo!",
cancelButtonText: "No, cancelar!",
closeOnConfirm: false,
closeOnCancel: false},
function (isConfirm) {
if (isConfirm) {
$.ajax({
url: route,
headers: {'X-CSRF-TOKEN': token},
type: 'DELETE',
dataType: 'json',
success: function () {
Cargar();
swal({title: "Eliminacion Completa",
type: "success",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
}, error: function () {
swal({title: "Error al Eliminar",
type: "error",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
}
});
} else {
swal({title: "CANCELADO",
type: "error",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
}
});
}
$("#actualizar").click(function () {
var value = $("#id").val();
var unidad = $("#unidad").val();
var cantidad = $("#cantidad").val();
var costo = $('#Costoactuaa').val();
var route = "/Ingredienteproducto/" + value;
if (!cantidad || !cantidad.trim().length) {
return Materialize.toast('Campos vacios', 1000, 'rounded');
}
if (!costo || !costo.trim().length) {
return Materialize.toast('Campos vacios', 1000, 'rounded');
}
var token = $("#token").val();
$.ajax({
url: route,
headers: {'X-CSRF-TOKEN': token},
type: 'PUT',
dataType: 'json',
data: {unidad: unidad, cantidad: cantidad, costo: costo},
success: function () {
Cargar();
$("#modal10").closeModal();
swal({title: "Actualizacion Completa",
type: "success",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
},
error: function () {
swal({title: "Error al Actualizar",
type: "error",
showConfirmButton: false,
closeOnConfirm: false,
timer: 1000});
}
});
});
function isNumberKey(evt) {
var charCode = (evt.which) ? evt.which : event.keyCode
if (charCode > 31 && (charCode < 48 || charCode > 57))
return false;
return true;
}
function NumCheck(e, field) {
key = e.keyCode ? e.keyCode : e.which
// backspace
if (key == 8)
return true
// 0-9
if (key > 47 && key < 58) {
if (field.value == "")
return true
regexp = /.[0-9]{9}$/
return !(regexp.test(field.value))
}
// .
if (key == 46) {
if (field.value == "")
return false
regexp = /^[0-9]+$/
return regexp.test(field.value)
}
// other key
return false
} |
import React, { useContext } from "react";
import { Context } from "../store/appContext";
import { Login } from "../component/login.js";
import { Inside } from "../component/inside.js";
import { Footer } from "../component/footer.js";
export const Home = () => {
const { store, actions } = useContext(Context);
return (
<>
{store.externa ? <Login /> : <Inside />}
<Footer />
</>
);
};
|
// pages/code/code.js
Page({
data: {},
onLoad: function (options) {
// 页面初始化 options为页面跳转所带来的参数
wx.setNavigationBarTitle({
title: '交流合作',
success: function (res) {
// success
}
})
},
// 分享
onShareAppMessage: function () {
return {
title: '关注我们',
path: '/page/index?id=123',
success: function (res) {
// 分享成功
// wx.showToast({
// title: '转发成功！',
// icon: 'success',
// duration: 2000
// });
},
fail: function (res) {
// 分享失败
// wx.showToast({
// title: '转发失败！',
// icon: 'fail',
// duration: 2000
// });
}
}
},
saveImage: function () {
wx.previewImage({
current: 'http://oot34wnx6.bkt.clouddn.com/code.jpeg', // 当前显示图片的链接，不填则默认为 urls 的第一张
urls: ['http://oot34wnx6.bkt.clouddn.com/code.jpeg','http://oot34wnx6.bkt.clouddn.com/people.jpg'],
success: function(res){
// success
},
fail: function(res) {
// fail
},
complete: function(res) {
// complete
}
})
// wx.showActionSheet({
// itemList: ['保存到本地', '取消'],
// success: function (res) {
// if (!res.cancel) {
// console.log(res.tapIndex)
// if (res.tapIndex === 0) {
// console.log("yi");
// // wx.chooseImage({
// // success: function (res) {
// // var tempFilePaths = res.tempFilePaths
// // console.log(tempFilePaths);
// // wx.saveFile({
// // tempFilePath: tempFilePaths[0],
// // success: function (res) {
// // var savedFilePath = res.savedFilePath
// // }
// // })
// // }
// // })
// }
// // else if(res.tapIndex===1){
// // console.log("er");
// // }else if(res.tapIndex===2){
// // console.log("san");
// // }
// }
// }
// });
},
previewImage: function () {
wx.previewImage({
current: 'http://oot34wnx6.bkt.clouddn.com/people.jpg', // 当前显示图片的链接，不填则默认为 urls 的第一张
urls: ['http://oot34wnx6.bkt.clouddn.com/code.jpeg','http://oot34wnx6.bkt.clouddn.com/people.jpg'],
success: function(res){
// success
},
fail: function(res) {
// fail
},
complete: function(res) {
// complete
}
})
},
onReady: function () {
// 页面渲染完成
},
onShow: function () {
// 页面显示
},
onHide: function () {
// 页面隐藏
},
onUnload: function () {
// 页面关闭
}
}) |
exports.user_server = {
num_worker: 1,
port: 4002
};
exports.mongodb_options = {
host: "JCloud-DB-01",
port: 27018,
database: "user"
};
exports.lego_remotes = [
{host: "JCloud-04",port:6006},
{host: "JCloud-04",port:6106}
]; |
/**
* Created by xiaojiu on 2017/3/28.
*/
'use strict';
define(['../../../app'], function (app) {
app.factory('platformExpenseAudit', ['$http','$q','$filter','HOST',function ($http,$q,$filter,HOST) {
return {
getThead: function () {
return [
{name:'序号',type:'pl4GridCount'},
{field:'ckName',name:'仓库名称'},
{field:'feeCost',name:'费用用途'},
{field:'money',name:'金额'},
{field:'receiptId',name:'发票号'},
{field:'description',name:'费用说明'},
{field:'examinestatu',name:'审核状态'},
{field:'name11',name:'操作',type:'operate',
buttons:[
{text:'通过',btnType:'btn',openModal:'#examination',call:"adopt"},
{text:'驳回',btnType:'btn',openModal:'#reject',call:"adopt"}
]
}]
},
getThead2: function () {
return [
{name:'序号',type:'pl4GridCount'},
{field:'ckName',name:'仓库名称'},
{field:'taskId',name:'业务单号'},
{field:'deliveryName',name:'配送名称'},
{field:'waybill',name:'订单号'},
{field:'transportFee',name:'运费'},
{field:'description',name:'费用说明'},
{field:'examinestatu',name:'审核状态'},
{field:'name11',name:'操作',type:'operate',
buttons:[
{text:'通过',btnType:'btn',openModal:'#examination',call:"adopt"},
{text:'驳回',btnType:'btn',openModal:'#reject',call:"adopt"}
]
}]
},
getSearch: function () {
var deferred=$q.defer();
$http.post(HOST+'/operatingexpense/getPfDicLists',{})
.success(function (data) {
deferred.resolve(data);
})
.error(function (e) {
deferred.reject('error:'+e);
});
return deferred.promise;
},
getDataTable: function (url,data) {
//将parm转换成json字符串
data.param=$filter('json')(data.param);
var deferred=$q.defer();
$http.post(HOST+url,data)
.success(function (data) {
deferred.resolve(data);
})
.error(function (e) {
deferred.reject('error:'+e);
});
return deferred.promise;
}
}
}]);
}); |
import React from 'react';
import { Link } from 'react-router-dom';
const NavigationBar = () => {
return (
<div>
<ul className='app-navbar'>
<li> <Link to='/'>Home</Link> </li>
<li> <Link to='/WebApp'>Web App</Link> </li>
<li> <Link to='/ChatApp'>Chat App</Link> </li>
<li> <Link to='/ACME_App'>ACME App</Link> </li>
<li> <Link to='/PlaygroundApp'>Playground App</Link> </li>
</ul>
</div>
)
}
export default NavigationBar;
|
import React from "react";
export default function Content() {
return <React.Fragment />;
}
Content.displayName = "OverflowMenu.Content";
|
var app = angular.module('itemEdit', ['toastr']);
app.controller('itemEditCtrl', function($scope, itemSer,$stateParams,$state,toastr){
$scope.showed=true
itemSer.getArea().then(function(response){
if(response.data.code == 0){
$scope.areas = response.data.data;
}
});
itemSer.getProject().then(function(response){
if(response.data.code == 0){
$scope.projects = response.data.data;
}
});
itemSer.getInternal().then(function(response){
if(response.data.code == 0){
$scope.internals = response.data.data;
}
});
itemSer.getDeparts().then(function(response){
if(response.data.code == 0){
$scope.departs = response.data.data;
}
});
itemSer.getApproval().then(function(response){
if(response.data.code == 0){
$scope.approvals = response.data.data;
}
});
itemSer.getNums().then(function(response){
if(response.data.code == 0){
$scope.nums = response.data.data;
}
});
$scope.btos =[{tables:[{}]}];
$scope.add = function(){
var obj = {tables:[{}]};
$scope.btos.push(obj);
}
$scope.del = function(flag){
$scope.btos.splice(flag,1);
}
var infoData ={id: $stateParams.id};
//获取ID
itemSer.itemId(infoData).then(function(response){
if(response.data.code== 0){
$scope.item = response.data.data;
if($scope.item.tables.status=="START"){
$scope.item.tables.status='启用';
}else if($scope.item.tables.status=="END"){
$scope.item.tables.status='禁用';
}
if($scope.item.tables!='' && $scope.item.tables!=undefined){
$scope.btos=$scope.item.tables;
}
if($scope.item.status=="START"){
$scope.item.status='启用';
}else if($scope.item.status=="END"){
$scope.item.status='禁用';
}
// for(var i=0;i<$scope.btos.length;i++){
// var index=i;
// if($scope.btos[index].status=="启用"){
// $scope.btos[index].status='START';
// // 需要把字符串转化为对象
// }else if($scope.btos[index].status=="禁用"){
// $scope.btos[index].status='END';
// // 需要把字符串转化为对象
// }
// }
}else{
toastr.error( response.data.msg, '温馨提示');
}
});
//编辑点击提交
$scope.openEditFun = function(){
if($scope.item.status=="启用"){
$scope.item.status='START';
// 需要把字符串转化为对象
}else if($scope.item.status=="禁用"){
$scope.item.status='END';
// 需要把字符串转化为对象
}
for(var i=0;i<$scope.btos.length;i++){
var index=i;
if($scope.btos[index].status=="启用"){
$scope.btos[index].status='START';
// 需要把字符串转化为对象
}else if($scope.btos[index].status=="禁用"){
$scope.btos[index].status='END';
// 需要把字符串转化为对象
}
}
var data = {
area:$scope.item.area,
project:$scope.item.project,
innerProject:$scope.item.innerProject,
depart:$scope.item.depart,
makeProject:$scope.item.makeProject,
dispatchNum:$scope.item.dispatchNum,
status:$scope.item.status,
tables:angular.copy($scope.btos),
id:$stateParams.id
}
var addData = converFormData(data);
itemSer.itemEdit(addData).then(function(response){
if(response.data.code == 0){
$state.go('root.allocation.projects.list[12]');
toastr.success( "编辑成功", '温馨提示');
}else{
toastr.error( response.data.msg, '温馨提示');
}
});
};
});
//数据类型转换工具
function converFormData() {
var objToFormData = function(obj,obj2,sec,flag){
if(obj){
var count = 0;
for(var name in obj){
var val = obj[name];
if(val instanceof Array){
val.forEach(function (item,index) {
for(var name2 in item){
var val2 = item[name2];
if(val2 instanceof Array){
val2.forEach(function (dItem,dIndex) {
objToFormData(dItem,obj,name+'['+index+'].'+name2,dIndex);
});
}else{
if((typeof val2)!='function'){
obj[name+'['+index+'].'+name2] = val2;
}
}
}
});
delete obj[name];
}else if(sec){
if((typeof val)!='function'){
obj2[sec+'['+flag+'].'+name] = val;
count++;
}
}else if(typeof val == 'object'){
for(var key in val){
obj[name + '.' + key] = val[key];
}
delete obj[name];
}
}
}
}
var _obj = $.extend(true,{},arguments[0]);
objToFormData(_obj);
return _obj;
}
|
'use strict';
angular.module('toons', []);
|
import React from "react";
import { withRouter } from "react-router-dom";
import moment from 'moment'
import SearchForm from "./SearchForm";
class SearchFormContainer extends React.Component {
state = {
barrio: "",
deporte: "",
fecha: undefined,
createdAt: moment(),
calendarFocused: false
};
onChange = (e, data) => {
const field = data.name;
const value = data.value;
this.setState(() => ({ [field]: value }));
};
onSubmit = e => {
e.preventDefault();
};
onDateChange = createdAt => {
if (createdAt) {
console.log(createdAt)
this.setState(() => ({ createdAt }));
}
};
onFocusChange = ({ focused }) => {
this.setState(() => ({ calendarFocused: focused }));
};
render() {
return <SearchForm createdAt={this.state.createdAt} onChange={this.onChange} onSubmit={this.onSubmit} onDateChange={this.onDateChange} onFocusChange={this.onFocusChange} calendarFocused={this.state.calendarFocused} />;
}
}
export default withRouter(SearchFormContainer);
|
// @ts-nocheck
// eslint-disable-next-line no-unused-vars
import elementCreator from './elementCreator';
const style = document.createElement('template');
style.innerHTML = `
<style>
#inputEl {
width: 0.1px;
height: 0.1px;
opacity: 0;
overflow: hidden;
position: absolute;
z-index: -1;
cursor: pointer;
}
#inputLabel {
background-color: var(--independence);
border: none;
color: white;
padding-left: 0px;
padding-right: 0px;
padding-top: 0.2em;
padding-bottom: 0.2em;
text-align: center;
text-decoration: none;
display: block;
font-size: medium;
border-radius: 0.4em;
box-shadow: var(--blacky);
margin-top: 0.2em;
box-shadow: 3px 3px 3px black;
-webkit-transition: 0.2s;
transition: opacity 0.2s;
width: 100%;
opacity: 0.8;
cursor: pointer;
}
#inputLabel:hover {
opacity: 1;
}
#inputLabel:focus {
background-color: var(--pinky-darker);
}
/* For tablets */
@media (max-width: 768px) {
#inputLabel {
font-size: small;
}
}
</style>
`;
class FileInput extends HTMLElement {
constructor() {
super();
this.attachShadow({ mode: 'open' });
this.shadowRoot.appendChild(style.content.cloneNode(true));
this.shadowRoot.appendChild(
<div>
<input type="file" id="inputEl" name="inputEl" />
<label id="inputLabel" htmlFor="inputEl"><slot /></label>
</div>,
);
}
get input() {
return this.shadowRoot.getElementById('inputEl');
}
set accept(toAccept) {
this.input.accept = toAccept;
}
set onFile(onFileFunc) {
const callback = (event) => {
if (event.target.files.length !== 0)onFileFunc(event.target.files[0]);
};
this.input.onchange = callback;
}
}
window.customElements.define('file-input', FileInput);
|
import React, { PropTypes } from 'react';
import ReactDOM from 'react-dom';
import withStyles from 'isomorphic-style-loader/lib/withStyles';
import s from './EditPage.less';
import {SuperTable, ModalWithDrag} from '../../../../components';
const props = {
title: PropTypes.string,
config: PropTypes.object,
controls: PropTypes.array,
value: PropTypes.object,
valid: PropTypes.bool,
size: PropTypes.oneOf(['small', 'middle', 'large']),
onCancel: PropTypes.func,
onOk: PropTypes.func,
onChange: PropTypes.func,
onSearch: PropTypes.func,
onExitValid: PropTypes.func,
};
/**
* onChange：内容改变时触发，原型func(key, value)
* onSearch: search组件搜索时触发，原型为(key, value)
*/
class EditPage extends React.Component {
static propTypes = props;
static PROPS = Object.keys(props);
constructor(props) {
super(props);
this.state = {height: 36};
}
getWidth = () => {
const {size} = this.props;
if (size === 'small') {
return 416;
} else if (size === 'middle') {
return 700;
} else if (size === 'large') {
return 910;
} else {
return 520;
}
};
getProps = () => {
const {title, onOk, onCancel,isShow} = this.props;
return {
title, onOk, onCancel,
width: 910,
visible: typeof isShow !== 'undefined' ? isShow : true,
maskClosable: false,
cancelText: '取消',
getContainer: () => ReactDOM.findDOMNode(this).firstChild,
footer: null
};
};
getColNumber = () => {
if (this.props.size === 'middle' || this.props.size === 'large') {
return 3;
} else {
return 2;
}
};
toTable = () => {
const {tableCols, tableItems,hasUnreadTable} = this.props;
const extra = 0
const props = {
hasUnreadTable,
cols: tableCols,
items: tableItems,
checkbox:false,
maxHeight: `calc(100vh - ${this.state.height + 219 + extra}px)`
};
return <SuperTable {...props}/>;
};
render() {
return (
<div>
<div />
<ModalWithDrag {...this.getProps()} >
{this.toTable()}
</ModalWithDrag>
</div>
);
}
}
export default withStyles(s)(EditPage);
|
export const HOURS_PER_DAY = 24;
export const MINUTES_PER_HOUR = 60;
export const SECONDS_PER_MINUTE = 60;
export const MSECONDS_PER_SECOND = 1000;
export const SECONDS_PER_DAY = HOURS_PER_DAY * MINUTES_PER_HOUR * SECONDS_PER_MINUTE; |
import React, { Component } from "react";
import styled from "styled-components";
import { NavLink } from "react-router-dom";
import ButtonIcon from "../../atoms/ButtonIcon/ButtonIcon";
import Logo from "../../atoms/Logo/Logo";
import ListItem from "../../atoms/ListItem/ListItem";
import { faShoppingCart, faHamburger } from "@fortawesome/free-solid-svg-icons";
const StyledWrapper = styled.div`
width: 100%;
padding: 0.5rem 2rem;
background-color: ${({ theme }) => theme.dirtyWhite};
border-bottom: 2px solid ${({ theme }) => theme.grey};
display: flex;
justify-content: space-between;
align-items: center;
position: sticky;
top: -0.02%;
z-index: 999;
@media (min-width: 1280px) {
position: relative;
flex-wrap: wrap;
padding: 0 2rem;
}
`;
const StyledLogo = styled(Logo)`
flex-grow: 1;
text-decoration: none;
color: ${({ theme }) => theme.black};
@media (min-width: 1280px) {
padding: 0.5rem 0 1rem;
}
`;
const StyledButtonIcon = styled(ButtonIcon)`
margin: 0 0 0 2rem;
color: ${({ theme, isMenuVisible }) =>
isMenuVisible ? theme.blue : theme.black};
transition: 1s;
@media (min-width: 1280px) {
display: none;
}
`;
const StyledNavWrapper = styled.ul`
list-style: none;
position: absolute;
top: 100%;
left: 0;
width: 100%;
text-align: center;
transform: translateX(
${({ isMenuVisible }) => (isMenuVisible ? "0" : "-100%")}
);
transition: 1s;
background-color: ${({ theme }) => theme.dirtyWhite};
display: flex;
flex-direction: column;
@media (min-width: 1280px) {
position: relative;
transform: translateX(0);
flex-direction: row;
justify-content: space-between;
padding: 0 2rem;
border-top: 2px solid ${({ theme }) => theme.grey};
}
`;
const StyledListItem = styled(ListItem)`
margin: 0.5rem 3rem;
padding: 0.5rem 0;
text-decoration: none;
transition: 0.5s;
@media (min-width: 768px) {
margin: 1rem 15rem;
padding: 1rem 0;
}
@media (min-width: 1280px) {
margin: 0;
}
`;
class Header extends Component {
state = {
isMenuVisible: false,
};
showMenu = () => {
this.setState((prevState) => ({ isMenuVisible: !prevState.isMenuVisible }));
};
render() {
return (
<StyledWrapper>
<StyledLogo as={NavLink} to="/">
Winter
<br />
Shop
</StyledLogo>
<NavLink to="/basket">
<ButtonIcon icon={faShoppingCart}></ButtonIcon>
</NavLink>
<StyledButtonIcon
icon={faHamburger}
big
isMenuVisible={this.state.isMenuVisible}
onClick={this.showMenu}
></StyledButtonIcon>
<StyledNavWrapper isMenuVisible={this.state.isMenuVisible}>
<StyledListItem as={NavLink} to="/">
Strona Główna
</StyledListItem>
<StyledListItem as={NavLink} to="/Narty">
Narty
</StyledListItem>
<StyledListItem as={NavLink} to="/Buty%20Narciarskie">
Buty Narciarskie
</StyledListItem>
<StyledListItem as={NavLink} to="/Odzież%20Narciarska%20Męska">
Odzież Narciarska Męska
</StyledListItem>
<StyledListItem as={NavLink} to="/Odzież%20Narciarska%20Damska">
Odzież Narciarska Damska
</StyledListItem>
<StyledListItem as={NavLink} to="/Dzieci">
Dzieci
</StyledListItem>
<StyledListItem as={NavLink} to="/Kaski">
Kaski
</StyledListItem>
<StyledListItem as={NavLink} to="/Gogle">
Gogle
</StyledListItem>
<StyledListItem as={NavLink} to="/Akcesoria">
Akcesoria
</StyledListItem>
<StyledListItem as={NavLink} to="/contact">
Kontakt
</StyledListItem>
</StyledNavWrapper>
</StyledWrapper>
);
}
}
export default Header;
|
export default {
state: {
ssjg: [],
qq: {}
},
getters: {
},
actions: { // 异步操作，请求数据
getssjg (context, value) {
fetch(`/zs/book/fuzzy-search?query=${value}&start=0&limit=15`)
.then(res => res.json())
.then(dataa => {
console.log(dataa)
context.commit('changessjg', dataa.books)
})
}
},
mutations: { // 唯一改变数据源的方式，可以在action中调用，也可以直接在组件内调用
changessjg (state, data) {
state.ssjg = data
}
}
}
|
app.controller("undergraduateCtrl", function ($scope, $http, $location) {
//write the code over here
var getDiplomski = function () {
$http.get("/api/subjects/undergraduate").then(
function success(res) {
$scope.diplomski = res.data;
},
function error(res) {
toastr.error('Something went wrong!');
}
);
}
getDiplomski();
$scope.goToTeme = function (id) {
$location.path("/subject/" + id);
}
var getUser = function () {
}
var promise = $http.get("/username");
promise.then(
function success(res) {
$scope.user = res.data;
},
function error(res) {
toastr.error("Something went wrong");
}
);
getUser();
var getsubjects = function () {
$http.get("/api/subjects/pro").then(
function success(res) {
$scope.subjects = res.data;
},
function error(res) {
toastr.error('Something went wrong!56');
}
);
}
getsubjects();
});
|
"use strict";
//
// lib and utils
//
const util = require("util"),
fs = require("fs"),
http = require("http"),
https = require("https"),
URL = require("url").URL,
crypto = require("crypto"),
path = require("path");
//
// g suite settings
//
const GSSCOPE = "https://www.googleapis.com/auth/gmail.readonly https://www.googleapis.com/auth/gmail.compose";
//
// openweathermap settings
//
const WEATHER_BASE_URL = "http://api.openweathermap.org/data/2.5/weather?";
//
// own variables
//
const start = Date.now(),
millimit = 12000,
globalTimeOut = 33,
doneTasks = [],
failedTasks = [],
timeoutHits = [],
llogQueue = [],
dataDir = process.cwd() + "/data/",
dataFileBaseName = ".weather.json",
nextLast = dataDir + Date.now().valueOf() + dataFileBaseName,
lastDataFile = dataDir + "last" + dataFileBaseName,
toDoTasks = {
getYesterdaysWeather: {
isDone: function(){
return isDone("getYesterdaysWeather")
},
fn: getYesterdaysWeather,
requires: []
},
getTodaysWeather: {
isDone: function(){
return isDone("getTodaysWeather")
},
fn: getTodaysWeather,
requires: []
},
persistWeather: {
isDone: function(){
return isDone("persistWeather")
},
fn: persistWeather,
requires: [
"getTodaysWeather"
]
},
compareWeather: {
isDone: function(){
return isDone("compareWeather")
},
fn: compareWeather,
requires:[
"getYesterdaysWeather",
"getTodaysWeather"
]
},
doMail: {
isDone: function(){
return isDone("doMail")
},
fn: doMail,
requires:[
"compareWeather"
]
},
unlinkLast: {
isDone: function(){
return isDone("unlinkLast")
},
fn: unlinkLast,
requires: []
},
linkLast: {
isDone: function(){
return isDone("linkLast")
},
fn: linkLast,
requires: [
"persistWeather"
]
}
};
const option = {
nextLast: nextLast,
dataDir: dataDir,
lastDataFile: lastDataFile,
subscribers: ["xelinorg@gmail.com"],
GSSCOPE: GSSCOPE,
WEATHER_BASE_URL: WEATHER_BASE_URL,
link: {
nextLast: nextLast,
last: lastDataFile
}
};
let statusCheckStarted = false,
startLogging = false;
//
// util functions
//
function noop(){return arguments}
function Base64EncodeUrl(str){
return str.replace(/\+/g, "-").replace(/\//g, "_").replace(/\=+$/, "")
}
function Base64DecodeUrl(str){
str = (str + "===").slice(0, str.length + (str.length % 4));
return str.replace(/-/g, "+").replace(/_/g, "/")
}
function getKeyFromIdentityMap(idenityMap){
return JSON.parse(idenityMap.toString()).private_key
}
function getClientEmailFromIdentityMap(idenityMap){
return JSON.parse(idenityMap.toString()).client_email
}
function getSubscribers(subscribers){
return subscribers.reduce(function(bucket, bcc){
bucket = bucket + ", <" + bcc + ">"
return bucket
}, "")
}
function isDone(taskName){
return doneTasks.filter(function(t){
return getKey(t) === taskName
}) === 1;
}
function getKey(container){
return Object.keys(container)[0]
}
function taskStatus(fn, option){
const fname = fn.name;
const requiredTasksKeys = toDoTasks[fname].requires;
if (requiredTasksKeys.length < 1){
return true
}
const goodToGo = doneTasks.reduce(function(bucket, t){
const taskKey = getKey(t);
const isDone = requiredTasksKeys.indexOf(taskKey) > -1;
if(isDone){
const wp ={};
wp[taskKey] = t[taskKey];
bucket.push(wp)
}
return bucket
}, []);
if (!goodToGo || !goodToGo.length || goodToGo.length < requiredTasksKeys.length){
failedTasks.push([fn, option]);
return
}
return goodToGo
}
function nonBlocking(remaining){
const doneTasksNames = doneTasks.reduce(function(bucket, dt){
bucket.push(getKey(dt))
return bucket
}, [])
const doneLength = remaining[1].requires.filter(function(item){
return doneTasksNames.indexOf(item) > -1
}).length
const requiredLength = remaining[1].requires.length
return doneLength === requiredLength
}
function notRunning(remaining){
const activeFound = timeoutHits.filter(function(item){
return item[0] === remaining[0]
})
return activeFound.length < 1
}
function hasRequirements(remaining){
return remaining[1].requires.length > 0
}
function addDataDir(fileName){
return dataDir + fileName
}
function getWeatherData(goodToGo){
if (!goodToGo || !goodToGo.length || !goodToGo.length > 0){
return {}
}
return goodToGo[0]["getTodaysWeather"]
}
function extractWeatherDiff(weatherPair){
const flatPair = weatherPair.reduce(function(bucket, wp){
const wpKey = getKey(wp);
bucket[wpKey] = wp[wpKey]
return bucket
}, {})
const oldWeather = flatPair["getYesterdaysWeather"]
const newWeather = flatPair["getTodaysWeather"]
const oldDt = getDateTime(oldWeather),
newDt = getDateTime(newWeather),
oldTemp = getTemperature(oldWeather),
newTemp = getTemperature(newWeather)
return {
oldWeather:{
dt: oldDt,
temp: oldTemp
},
newWeather: {
dt: newDt,
temp: newTemp
},
weatherDiff:{
dt: newDt - oldDt,
temp: newTemp - oldTemp
}
}
}
function getDateTime(payload){
return payload.dt
}
function getTemperature(payload){
return payload.main.temp
}
function getPersistOption(option, data){
let persistData = null;
if (hasTodaysWeather(data)){
persistData = data.filter(function(task){
if (Object.keys(task)[0] === "getTodaysWeather"){
return true
}
return false
})
}
if (hasDataP(data)){
persistData = data[1].dataP
}
const persistOption = {
nextLast: option.link.nextLast,
data: persistData
}
return persistOption
}
function hasDataP(data){
if (data[1] && data[1].dataP){
return true
}
return false
}
function hasTodaysWeather(data){
const getTodaysWeather = data.filter(function(entry){
if (entry.getTodaysWeather){
return true
}
return false
});
if (getTodaysWeather.length > 0){
return true
}
return false
}
function llog(){
const logOut = llogQueue.splice( 0, llogQueue.length )
if (startLogging && !logOut){
return Array.from(arguments).forEach(function(arg){
console.log(arg)
})
}
Array.from(arguments).forEach(function(arg){
logOut.push(arg)
})
return logOut.forEach(function(l){
console.log(l)
})
}
//
// mailing functions
//
const JWT_HEADER = {
"alg":"RS256",
"typ":"JWT"
};
function joinBearer(bearer){
return "Bearer " + bearer
}
function getIatExpPair(){
// this is for clock skew
const xIAT = new Date(Date.now()),
xEXP = new Date(xIAT.getTime() + (9*60*1000)); // we add nine minutes
return {
IAT: (xIAT.getTime()/1000 - 120), // we take out 3 minutes
EXP: (xEXP.getTime()/1000 )
}
}
function getJwtDwdClaim(iatExpPair, impersonate, serviceaccount, gsscope){
const JWT_DWD_CLAIM = {
"iss": serviceaccount,
"sub": impersonate,
"scope": gsscope,
"aud": "https://www.googleapis.com/oauth2/v4/token",
"exp": iatExpPair.EXP,
"iat": iatExpPair.IAT
}
return JWT_DWD_CLAIM
}
function signJWT(identitypath, impersonate, gsscope, cb) {
fs.readFile(identitypath, function(err, data){
if (err){
throw err
}
const sign = crypto.createSign("RSA-SHA256");
const iatExpPair = getIatExpPair(),
jwtBasePair = {
header: JWT_HEADER,
body: getJwtDwdClaim(iatExpPair, impersonate, getClientEmailFromIdentityMap(data), gsscope)
},
jwtBasePairEncoded = {};
Array.from(Object.entries(jwtBasePair)).reduce(function(bucket, item){
bucket[item[0]] = Buffer.from(JSON.stringify(item[1])).toString("base64");
return bucket
}, jwtBasePairEncoded);
const jwtBaseEncoded = jwtBasePairEncoded.header + "." + jwtBasePairEncoded.body;
sign.update(jwtBaseEncoded);
return cb(sign.sign(getKeyFromIdentityMap(data), "base64"), jwtBaseEncoded)
})
}
function encodeJWT(identitypath, impersonate, gsscope, cb){
return signJWT(identitypath, impersonate, gsscope, function(jwtBaseSigned, jwtBaseEncoded){
const jwtSignedBase64EncodeUrl = Base64EncodeUrl(jwtBaseSigned.toString());
const jwtFull = jwtBaseEncoded + "." + jwtSignedBase64EncodeUrl;
cb(null, jwtFull)
})
}
function getBearer(jwtFull, cb){
const postData = "grant_type=urn%3Aietf%3Aparams%3Aoauth%3Agrant-type%3Ajwt-bearer&assertion=" + jwtFull;
const options = {
hostname: "www.googleapis.com",
path: "/oauth2/v4/token",
method: "POST",
headers: {
"Content-Type": "application/x-www-form-urlencoded",
"Content-Length": Buffer.byteLength(postData)
}
};
const req = https.request(options, function(res){
res.setEncoding("utf8");
const data = [];
res.on("data", (chunk) => {
data.push(chunk)
});
res.on("end", function() {
const res = data.reduce(function(bucket, buf){
return bucket.concat(buf.toString())
}, "");
cb(null, res)
})
});
req.on("error", function(e){
cb(e)
});
req.write(postData);
req.end();
}
function getMsg(impersonate, subscribers, body, ts){
const msgts = ts || (new Date(Date.now())).toUTCString()
const msg = "To: <" + impersonate + ">" + "\n" +
"From: <" + impersonate + ">" + "\n" +
"Bcc: " + getSubscribers(subscribers) + "\n" +
"Subject: weather-ping" + "\n" +
"Date: " + msgts + "\n" +
"Content-Type: text/plain; charset=\"UTF-8\"" + "\n\n" +
"This is the weather ping. And the diff is..." + "\n\n" +
body + "\n\n" +
"Bye Bye for now!" + "\n";
return msg
}
function getMsgEncoded(impersonate, subscribers, body, ts){
const tmpmsg = getMsg(impersonate, subscribers, body, ts);
const bufferedToBase64 = Buffer.from(tmpmsg).toString("base64");
return Base64EncodeUrl(bufferedToBase64)
}
function sendMail(option, cb) {
const postData = {
raw: getMsgEncoded(option.IAM_MAIL_IMPERSONATE, option.subscribers, option.body)
},
dataSerialized = JSON.stringify(postData);
const options = {
hostname: "www.googleapis.com",
path: "/gmail/v1/users/" + option.IAM_MAIL_IMPERSONATE + "/messages/send?uploadType=multipart",
method: "POST",
headers: {
"Authorization": joinBearer(option.BEARER),
"Content-Type": "application/json"
}
};
const req = https.request(options, function(res) {
res.setEncoding("utf8");
const data = [];
res.on("data", function(chunk) {
data.push(chunk)
});
res.on("end", function() {
const res = data.reduce(function(bucket, buf){
return bucket.concat(buf.toString())
}, "");
cb(null, JSON.parse(res))
})
});
req.on("error", function(e) {
cb(e)
});
req.write(dataSerialized);
req.end();
}
//
// these are the loop tools for the timeout flow
//
function stopRunning(){
return Date.now().valueOf() - start.valueOf() > millimit
}
function reRun(task){
if (typeof task[0] === "function" || (typeof task[1] === "object" && task.length > 1)){
failedTasks.push([task[0], task[1]]);
const toReRun = new Set(failedTasks.splice(0, failedTasks.length));
return backToTheFuture(toReRun)
}else{
llog("reRun fn is not usable... returning ");
return
}
}
function backToTheFuture(stack){
return stack.forEach(function(ft){
const ftname = typeof ft === "function" ? ft.name : ft[0].name
const doLater = setTimeout(function(){
if (typeof ft === "function"){
return ft(options)
}
if (typeof ft === "object" && ft.length > 1){
return ft[0](ft[1])
}
return ft.length ===1 ? ft[0]() : 0x0
}, ftname === "statusCheck" ? globalTimeOut : 0)
timeoutHits.push([ftname, doLater])
})
}
function statusCheck(option){
const notDoneTasks = toDoTasks;
if (doneTasks.length < Object.entries(notDoneTasks).length && !stopRunning()){
timeBrain(notDoneTasks, option)
return reRun([statusCheck, option])
} else {
llog(doneTasks);
llog("job done!\n")
llog("timeout hits.. " + timeoutHits.length)
llog("time took... " + (Date.now().valueOf() - start.valueOf())/1000)
return 0x0
}
}
function zeroPass(toDoTasks, option){
return Object.entries(toDoTasks)
.reduce(function(bucket, tdt){
if (!tdt[1].requires.length > 0){
failedTasks.push([tdt[1].fn, option]);
return bucket
}
bucket.push(tdt);
return bucket
}, [])
}
function nthPass(toDoTasks, option){
return Object.entries(toDoTasks)
.reduce(function(bucket, remaining){
if (hasRequirements(remaining) && nonBlocking(remaining) && notRunning(remaining)){
failedTasks.push([remaining[1].fn, option]);
bucket.push(remaining)
}
return bucket
}, [])
}
function timeBrain(toDoTasks, option){
// if is loop run, start all tasks that have their requirements fullfilled
if (statusCheckStarted){
return nthPass(toDoTasks, option)
}
// if is first run do task without requirements
return zeroPass(toDoTasks, option)
}
//
// promised brain flow
//
function promisifyAll(){
return {
persistWeatherP: util.promisify(persistWeather),
unlinkLastP: util.promisify(unlinkLast),
linkLastP: util.promisify(linkLast),
getTodaysWeatherP: util.promisify(getTodaysWeather),
getYesterdaysWeatherP: util.promisify(getYesterdaysWeather),
doMailP: util.promisify(doMail)
}
}
function promisedBrain(option){
const p = promisifyAll();
Promise.all([
p.getTodaysWeatherP(option),
p.getYesterdaysWeatherP(option)
])
.then(
function(data){
const persistOption = getPersistOption(option, data);
return Promise.all([
p.persistWeatherP(persistOption),
p.unlinkLastP(option),
data
])
},
function(err){
if (err.code === "ENOENT"){
return Promise.all([
p.getTodaysWeatherP(option)
])
}
}
)
.then(
function(data){
const persistOption = getPersistOption(option, data)
if (persistOption && (persistOption.data || data.length > 2)){
return Promise.all([
p.persistWeatherP(persistOption),
data[2] || data
])
}
return "no data found no file saved or linked and no mail send"
},
function(err){
llog("step two error: openweathermap call", err)
}
)
.then(
function(data){
return Promise.all([
p.linkLastP(option),
data
])
},
function(err){
llog("step three error", err)
}
)
.then(
function(data){
option.msg = {
weatherDiff:extractWeatherDiff(data[1][1])
};
return Promise.all([
p.doMailP(option)
])
},
function(err){
llog("step four error..", err);
}
)
.then(
function(data){
llog("final data..", data);
llog("time took... " + (Date.now().valueOf() - start.valueOf())/1000)
},
function(err){
llog("final error..", err);
llog("time took... " + (Date.now().valueOf() - start.valueOf())/1000)
}
)
}
//
// business functions
//
function getYesterdaysWeather(option, cb){
!cb && (cb = noop)
const getYesterdaysWeatherArguments = arguments;
return fs.stat(option.lastDataFile, function(err, data){
if (err){
return cb(err)
}
return fs.readFile(option.lastDataFile, function(err, data){
if (err){
return cb(err)
}
if(!err){
const taskData = {};
taskData[getYesterdaysWeather.name] = JSON.parse(data.toString())
doneTasks.push(taskData)
return cb(null, taskData)
}
})
})
}
function getTodaysWeather(option, cb){
!cb && (cb = noop)
const getTodaysWeatherArguments = arguments;
const req = http.request(option.weatherUrl, function(res){
const data = [];
res.on("data", function(chunk){
data.push(chunk)
});
res.on("end", function(){
const res = data.reduce(function(bucket, buf){
return bucket.concat(buf.toString())
}, "");
const taskData = {};
taskData[getTodaysWeather.name] = JSON.parse(res.toString())
doneTasks.push(taskData)
return cb(null, taskData)
})
});
req.on("error", function(err){
const sheduled = failedTasks.filter(function(ft){return ft.name === getTodaysWeather.name }).length === 1;
!sheduled && failedTasks.push([getTodaysWeather, getTodaysWeatherArguments]);
return cb(err)
});
req.end()
}
function persistWeather(option, cb){
!cb && (cb = noop)
const fname = persistWeather.name
const goodToGo = taskStatus(persistWeather, option);
if (goodToGo && goodToGo.length > 0) {
const weather = getWeatherData(goodToGo);
const nextFileName = option.nextLast
if (!weather["dt"]){
return cb("payoad does not have a datetime")
}
return fs.writeFile(nextFileName, JSON.stringify(weather), function(err, data){
if (err){
return cb(err)
}
if(!err){
const task = {};
task[fname] = {
filecontent: weather,
filename: nextFileName
}
doneTasks.push(task)
return cb(null, task)
}
})
}
}
function compareWeather(option, cb){
!cb && (cb = noop)
const fname = compareWeather.name
const goodToGo = taskStatus(compareWeather, option);
if (goodToGo) {
const task = {};
task[fname] = extractWeatherDiff(goodToGo)
doneTasks.push(task)
return cb(null, task)
}
return cb("compareWeather failed")
}
function doMail(option, cb){
!cb && (cb = noop)
const fname = doMail.name
const goodToGo = option.msg && option.msg.weatherDiff ? option.msg : taskStatus(doMail, option);
if (goodToGo){
option.body = JSON.stringify(goodToGo);
if (option.BEARER){
return sendMail(option, function(err, data){
if (err){
return cb(err)
}
const task = {};
task[fname] = goodToGo
doneTasks.push(task)
return cb(null, task)
})
}
return encodeJWT(option.IDENTITY_PATH, option.IAM_MAIL_IMPERSONATE, option.GSSCOPE, function(err, jwt){
if (!err){
return getBearer(jwt, function(err, bearer){
if (!err){
option.BEARER = JSON.parse(bearer).access_token
return sendMail(option, function(err, data){
if (err){
return cb(err)
}
const task = {};
task[fname] = goodToGo
doneTasks.push(task)
return cb(null, task)
})
}
return cb("getBearer failed")
})
}
return cb("encodeJWT failed")
})
}
return cb("doMail not good to go")
}
function unlinkLast(option, cb){
!cb && (cb = noop)
const fname = unlinkLast.name
return fs.stat(option.lastDataFile, function(err, data){
if(err){
return cb(err)
}
return fs.unlink(option.lastDataFile, function(err, data){
if(err){
return cb(err)
}
const task = {};
task[fname] = option
doneTasks.push(task)
return cb(null, task)
})
})
}
function linkLast(option, cb){
!cb && (cb = noop)
const fname = linkLast.name
return fs.symlink(option.link.nextLast, option.link.last, function(err, data){
if(err){
return cb(err)
}
const task = {};
task[fname] = option
doneTasks.push(task)
return cb(null, task)
})
}
//
// boot process
//
function setBootOps(option, requiredBootOpts, realBootops){
return requiredBootOpts.filter(function(opt){
const foundOpt = realBootops[opt];
if (foundOpt){
option[opt] = foundOpt;
return true
}
return false
}).length === requiredBootOpts.length
}
const requiredBootOpts = [
"IDENTITY_PATH",
"IAM_MAIL_IMPERSONATE",
"APIID",
"CITYID"
];
const realBootops = process.argv.reduce(function(ops, op){
const keyVal = op.split("=");
if(keyVal){
ops[keyVal[0]] = keyVal[1];
}
return ops
}, {})
if (setBootOps(option, requiredBootOpts, realBootops)){
const weatherUrl = option.WEATHER_BASE_URL + "id=" + option.CITYID + "&APPID=" + option.APIID;
option.weatherUrl = new URL(weatherUrl);
if (process.argv[2] === "p"){
promisedBrain(option)
}else{
statusCheck(option);
statusCheckStarted = true
}
} else {
llog("required options not provided")
}
// log end of pass zero
startLogging = true
// done
|
/**
* Created by prasanndubey on 13/09/17.
*/
import React, { Component } from 'react';
import {
StyleSheet,
Text,
View, TouchableOpacity,ScrollView,TextInput
} from 'react-native';
const Note = ({keyval,key,val,deleteMethod}) => {
return (
<View key={keyval} style={styles.note}>
<Text style={styles.noteText}>{val.date}</Text>
<Text style={styles.noteText}>{val.note}</Text>
<TouchableOpacity onPress={deleteMethod} style={styles.noteDelete}>
<Text style={styles.noteDeleteText}>Del</Text>
</TouchableOpacity>
</View>
);
}
const styles = StyleSheet.create({
note:{
position: 'relative',
padding:20,
paddingRight:100,
borderBottomWidth:1,
borderBottomColor:'#ededed'
},
noteText:{
paddingLeft:20,
borderLeftWidth:10,
borderLeftColor:'#E91E63'
},
noteDelete:{
position: 'absolute',
justifyContent:'center',
alignItems:'center',
backgroundColor:'#2980b9',
padding:10,
top:10,
bottom:10,
right:10
},
noteDeleteText:{
color:'white',
},
});
export default Note;
|
const Discord = require("discord.js");
//unban @member
module.exports.run = async (bot, message, args) => {
let tounban = message.guild.member(message.mentions.users.first() || message.guild.members.get(args[0]));
let repchannel = message.guild.channels.find(`name`, "🌘reports_bots");
let errorschannel = message.guild.channels.find(`name`, "🌏errors_bots");
//лимит который нужно прописать во все комманды что бы никто другой пока что не использовал
if(!message.member.hasPermission("MANAGE_MESSAGES"))
return;
if(!message.member.hasPermission("BAN_MEMBERS", "ADMINISTRATOR"))
return message.channel.send("Похоже у тебя недостаточно на это прав, дружище :thinking:. ");
if(!errorschannel)
return message.channel.send("Канал ошибок не существует!");
if(!repchannel)
errorschannel.send("Канал репортов не существует!");
if(!repchannel)
return message.channel.send("Канал репортов не существует!");
repchannel.send(`<@${tounban.id}> был разбанен администратором!`);
message.guild.unban(tounban);
message.channel.send(`Есть, капитан! <@${tounban.id}> теперь снова получил визу в наш город! :ok_hand: `);
}
module.exports.help = {
name: "unban"
}
|
// test the website navbar links
var baseUrl = casper.cli.options.baseUrl;
casper.test.begin("test the navbar links", 5, function(test)
{
casper.start(baseUrl, function()
{
test.assertTitle('Home');
this.click('nav a[href="music"]');
});
casper.then(function() {
test.assertTitle('Music');
this.click('nav a[href="doc"]');
});
casper.then(function() {
test.assertTitle('Doc');
this.click('nav a[href="demos/"]');
});
casper.then(function() {
test.assertTitle('Demos');
this.click('nav a[href="contact"]');
});
casper.then(function() {
test.assertTitle('Contact');
});
casper.run(function() {
test.done();
});
});
|
import React from 'react';
import './scss/components/login.scss';
import spotifyLogo from './images/spotify-logo.png';
class Login extends React.Component {
async spotifyLogin() {
let res = await fetch('/login')
let resText = await res.text()
console.log(resText);
window.location.replace(resText);
}
render() {
return (
<div className="Login container">
<div className="row">
<div className="col-12">
<div>
<img className="logo pbot-2" src={spotifyLogo} alt="Logo" />
<h1>Spotify Playlist Generator</h1>
<p className="lead pbot-1">Login to Spotify to continue</p>
<button onClick={() => this.spotifyLogin()} className="btn btn-primary">Log In</button>
</div>
</div>
</div>
</div>
);
}
}
export default Login;
|
import shopList from './data/shopes'
import mockUtil from './mock_util'
export default {
list (reqBody) {
return new Promise((resolve, reject) => {
setTimeout(() => {
resolve(mockUtil.success(mockUtil.buildPageResp(shopList)))
})
})
},
get (id) {
const listFilterById = shopList.filter(shop => shop.id === id)
if (listFilterById.length > 0) {
return Promise.resolve(mockUtil.success(listFilterById[0]))
} else {
return Promise.reject(new Error('not found'))
}
}
}
|
/**
* @license Copyright (c) 2003-2020, CKSource - Frederico Knabben. All rights reserved.
* For licensing, see LICENSE.md.
*/
'use strict';
const fs = require( 'fs' );
const path = require( 'upath' );
const shell = require( 'shelljs' );
/**
* @param {Object} callOptions Call options.
* @param {String} cwd An absolute path to the directory where `mrgit.json` is available.
* @returns {Options} The options object.
*/
module.exports = function cwdResolver( callOptions, cwd ) {
const mrgitJsonPath = path.resolve( cwd, 'mrgit.json' );
// Default options.
let options = {
cwd,
packages: 'packages',
resolverPath: path.resolve( __dirname, '..', 'default-resolver.js' ),
resolverUrlTemplate: 'git@github.com:${ path }.git',
resolverTargetDirectory: 'git',
resolverDefaultBranch: 'master',
ignore: null,
scope: null,
packagesPrefix: [],
overrideDirectoryNames: {},
baseBranches: []
};
if ( fs.existsSync( mrgitJsonPath ) ) {
options = Object.assign( options, require( mrgitJsonPath ), options );
}
options = Object.assign( options, callOptions );
options.packages = path.resolve( cwd, options.packages );
if ( !Array.isArray( options.packagesPrefix ) ) {
options.packagesPrefix = [ options.packagesPrefix ];
}
// Check if under specified `cwd` path, the git repository exists.
// If so, find a branch name that the repository is checked out. See #103.
if ( fs.existsSync( path.join( cwd, '.git' ) ) ) {
const response = shell.exec( 'git rev-parse --abbrev-ref HEAD', { silent: true } );
options.cwdPackageBranch = response.stdout.trim();
}
return options;
};
/**
* @typedef {Object} Options
*
* @property {String} cwd An absolute path to the directory which contains `mrgit.json` file.
*
* @property {String} [packages='<cwd>/packages/'] Directory to which all repositories will be cloned.
*
* @property {String} [resolverPath='@mrgit/lib/default-resolver.js'] Path to a custom repository resolver function.
*
* @property {String} [resolverUrlTemplate='git@github.com:${ path }.git'] Template used to generate repository URL out of a
* simplified 'organization/repository' format of the dependencies option.
*
* @property {String} [resolverTargetDirectory='git'] Defines how the target directory (where the repository will be cloned)
* is resolved. Supported options are: 'git' (default), 'npm'.
*
* * If 'git' was specified, then the directory name will be extracted from
* the git URL (e.g. for 'git@github.com:a/b.git' it will be 'b').
* * If 'npm' was specified, then the package name will be used as a directory name.
*
* This option can be useful when scoped npm packages are used and one wants to decide
* whether the repository will be cloned to packages/@scope/pkgname' or 'packages/pkgname'.
*
* @property {String} [resolverDefaultBranch='master'] The branch name to use if not specified in mrgit.json dependencies.
*
* @property {String|null} [ignore=null] Ignores packages with names matching the given glob.
*
* @property {String|null} [scope=null] Restricts the scope to package names matching the given glob.
*
* @property {Boolean|undefined} [recursive=undefined] Whether to install dependencies recursively.
*
* @property {Boolean|String|undefined} [branch=undefined] If a bool: whether to use branch names as an input data.
* If a string: name of branch that should be created.
*
* @property {Boolean|undefined} [hash=undefined] Whether to use current commit hashes as an input data.
*
* @property {Object} [overrideDirectoryNames={}] A map that allows renaming directories where packages will be cloned.
*
* @property {String|Array.<String>} [packagesPrefix=[]] Prefix or prefixes which will be removed from packages' names during
* printing the summary of the "status" command.
*
* @property {Array.<String>} [baseBranches=[]] Name of branches that are allowed to check out (based on a branch in main repository)
* if specified package does not have defined a branch.
*
* @property {String} [cwdPackageBranch] If the main repository is a git repository, this variable keeps
* a name of a current branch of the repository. The value is required for `baseBranches` option.
*/
|
// export de module
// on defini notre fnc de requete reponse et next
module.exports = {
admin: (req, res, next) => {
// console.log('Middleware Admin: ', req.session)
//la requete session n'est pas admin on redirige sur ('/')
if (!req.session.isAdmin) res.redirect('/')
// simon on continue la requete
else next()
},
ban: (req, res, next) => {
if (req.session.isBan === true) res.end()
// simon on continue la requete
else next()
}
} |
// this looked for matching items within two arrays
const bobsFollowers = ['Joe', 'Mike', 'Mary', 'Jan'];
const tinasFollowers = ['Joe', 'Mark', 'Mary'];
const mutualFollowers = []
for (let i = 0; i < bobsFollowers.length; i++) { // this goes through each item in the first array
for (let j = 0; j < tinasFollowers.length; j++) { // this goes throught each item ibn the second array each time it thourgh the first
if (bobsFollowers[i] === tinasFollowers[j]) { // this reconizes if any of the items match from both arrays
mutualFollowers.push(tinasFollowers[j]) // this pushes the value of the matching item into a third array
console.log('Both users have ' + bobsFollowers[j] + ' as a friend.')
/* this prints
"Both users have Joe as a friend.
Both users have Mary as a friend."
}
}
};
const liquorList = ['Jack', 'Titos', 'Jose', 'Crown', 'Dos XX'];
const herLiquorList = ['Dos XX', 'Rose', 'Henessee', 'Chris', 'Crown'];
const mustHaveLiquor = []
console.log(`My List From Last to First`);
console.log(liquorList)
console.log(herLiquorList)
for (let i = 0; i < liquorList.length; i++) {
for (let j = 0; j < herLiquorList.length; j++) {
if (liquorList[i] === herLiquorList[j]) {
mustHaveLiquor.push(liquorList[i]);
console.log(`Both lists have ${liquorList[j]} in them`)
}
}
};
console.log(mustHaveLiquor);
|
// @flow
import * as React from "react";
import moment from "moment";
import Select from "lk/components/Select/Select.jsx";
import { AdminFileUpload } from "./components/AdminFileUpload.js";
function singleFileContainer( props: Props ): React.Node
{
const onChange = ( field: string, value: any ) => props.onChange( { ...props.data, [field]: value } );
const onChangeString = ( event ) => onChange( event.target.name, event.target.value );
let StatusBlock = (): React.Node => null;
if( props.__isError )
StatusBlock = (): React.Node => <div className="b-upload__error-block"></div>;
else
if( !props.__isUploaded )
StatusBlock = (): React.Node => <div className="b-upload__container-progress-bar"><div><span></span></div></div>;
const data = props.data;
const date = data.date || moment().format( "DD.MM.YYYY" );
return (
<div className="b-upload__item uploaded">
<StatusBlock />
<img src={ props.__file } alt="Фото" />
<span>Описание</span>
<textarea name="description" rows="2" cols="23" value={ data.description } onChange={ onChangeString }></textarea>
<span>Дата загрузки</span>
<input name="date" type="text" value={ date } onChange={ onChangeString } />
<span>Комментарий</span>
<textarea name="comment" rows="2" cols="23" value={ data.comment } onChange={ onChangeString }></textarea>
{ props.__removeButton }
</div>
);
}
export default function PrivatePersonsFileUpload( props )
{
const uploadProps =
{
...props.options,
singleFileContainer: singleFileContainer,
defaultFileProps:
{
id: 0,
order: 0,
file: null,
description: null,
date: null,
comment: null
},
filesLocationPrefix: "/custom/subjects/private_persons",
files: props.formData,
onChange: props.onChange,
additionalProps: props.formContext,
};
return (
<div className="grid-row grid-padded-v1x">
<div className="grid-cols-24">
{ props.schema.title }:<br />
<AdminFileUpload { ...uploadProps } />
</div>
</div>
);
} |
import React, { Component } from "react";
import PropTypes from "prop-types";
import ItemFeed from "./ItemFeed";
import SelectListGroup from "../common/SelectListGroup";
import fetchItems from "../common/hoc/fetchItems";
import fetchCurrentUser from "../common/hoc/fetchCurrentUser";
import { SecondaryHeader } from "../common/styles/Header";
import {
sortOptions,
selectOptions,
sort,
select
} from "../../utils/browseItems";
export class Items extends Component {
constructor(props) {
super(props);
this.state = {
sortBy: "",
selectedCategory: ""
};
}
onChange = e => {
this.setState({ [e.target.name]: e.target.value });
};
render() {
const { items } = this.props.item;
const itemsArray = select(this.state.selectedCategory, items);
sort(this.state.sortBy, itemsArray);
return (
<div className="container">
<div className="row">
<div className="col-md-12">
<SecondaryHeader className="m-5 text-center">
Items for sale
</SecondaryHeader>
<div className="row">
<div className="col-md-6">
<SelectListGroup
placeholder="* Category"
name="selectedCategory"
value={this.state.selectedCategory}
options={selectOptions}
onChange={this.onChange}
/>
</div>
<div className="col-md-6">
<SelectListGroup
placeholder="* Sort by..."
name="sortBy"
value={this.state.sortBy}
options={sortOptions}
onChange={this.onChange}
/>
</div>
</div>
<ItemFeed
items={itemsArray}
currentUser={this.props.user.currentUser}
/>
</div>
</div>
</div>
);
}
}
Items.propTypes = {
item: PropTypes.object.isRequired,
user: PropTypes.object.isRequired
};
export default fetchCurrentUser(fetchItems(Items));
|
var Error = require('../errors');
var User = require('../models/user');
module.exports = function (req,res,next) {
console.log(req.session);
if ((!req.session) || (!req.session.token)) {
console.log('redirect 1');
res.redirect('/login.html');
return;
}
User.findById(req.session.token,function(err,doc) {
if (!doc) {
console.log('redirect 2');
res.redirect('/login.html');
return;
}
next();
});
}
|
import React from 'react';
import {Link} from 'react-router-dom';
const Nav = () => {
return(
<div>
<nav className="navbar navbar-expand-md navbar-dark bg-dark mb-4">
<div className="container-fluid">
<Link to="/" className="navbar-brand">Log in</Link>
<div>
<ul className="navbar-nav me-auto mb-2 mb-md-0">
<li className="nav-item">
<Link to="/notifications" className="navbar-brand">Notifications</Link>
</li>
<li className="nav-item">
<Link to="/balance" className="navbar-brand">Balance</Link>
</li>
<li className="nav-item">
<Link to="/transfer" className="navbar-brand">Transfer</Link>
</li>
<li className="nav-item">
<Link to="/history" className="navbar-brand">History</Link>
</li>
<li className="nav-item">
<Link to="/account" className="navbar-brand">Account</Link>
</li>
</ul>
</div>
</div>
</nav>
</div>
);
};
export default Nav;
|
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