| --- |
| license: apache-2.0 |
| task_categories: |
| - feature-extraction |
| tags: |
| - biology |
| - string |
| - text |
| - code |
| pretty_name: ACGT |
| --- |
| |
| # StringKilla - Small Datasets for String Algorithms Benchmarking |
|
|
| The goal of this dataset is to provide a fairly diverse set of strings to evalute the performance of various string-processing algorithms in [StringZilla](https://github.com/ashvardanian/stringzilla) and beyond. |
|
|
| ## English Texts |
|
|
| ### English Leipzig Corpora Collection |
|
|
| - 124 MB uncompressed |
| - 1'000'000 lines of ASCII |
| - 8'388'608 tokens of mean length 5 |
|
|
| The dataset was originally pulled from Princeton's website: |
|
|
| ```sh |
| wget --no-clobber -O leipzig1M.txt https://introcs.cs.princeton.edu/python/42sort/leipzig1m.txt |
| ``` |
|
|
| Pull it with: |
|
|
| ```sh |
| huggingface-cli download ashvardanian/StringKilla leipzig1M.txt |
| ``` |
|
|
| ### Hutter Prize Compression Dataset |
|
|
| - 1 GB uncompressed, 0.3 GB originally |
| - 13'147'025 lines of ASCII |
| - 67'108'864 tokens of mean length 6 |
|
|
| The dataset was originally Matt Mahoney's page: |
|
|
| ```sh |
| wget --no-clobber -O enwik9.zip http://mattmahoney.net/dc/enwik9.zip |
| unzip enwik9.zip && rm enwik9.zip && mv enwik9 enwik9.txt |
| ``` |
|
|
| Pull it with: |
|
|
| ```sh |
| huggingface-cli download ashvardanian/StringKilla enwik9.txt |
| ``` |
|
|
| ## Multilingual Texts |
|
|
| ### UTF8 Decoder Stress Test |
|
|
| - 14 KB uncompressed |
| - 204 lines of UTF8 |
|
|
| The dataset was originally pulled from an Martin Dürst's HTML adaptation of Markus Kuhn's UTF8 stress test: |
|
|
| ```sh |
| wget --no-clobber -O utf8.txt https://www.w3.org/2001/06/utf-8-test/UTF-8-demo.html |
| ``` |
|
|
| Pull it with: |
|
|
| ```sh |
| huggingface-cli download ashvardanian/StringKilla utf8.txt |
| ``` |
|
|
| ### XLSum Extractive Summarization Benchmark |
|
|
| - 4.7 GB uncompressed, 1.7 GB originally |
| - 1'004'598 lines of UTF8 |
| - 268'435'456 tokens of mean length 8 |
|
|
| The dataset was originally aggregates from "Bangladesh University of Engineering and Technology" [GitHub repo](https://github.com/csebuetnlp/xl-sum): |
|
|
| ```sh |
| wget --no-clobber -O xlsum.csv.gz https://github.com/ashvardanian/xl-sum/releases/download/v1.0.0/xlsum.csv.gz |
| gzip -d xlsum.csv.gz |
| ``` |
|
|
| Pull it with: |
|
|
| ```sh |
| huggingface-cli download ashvardanian/StringKilla xlsum.csv |
| ``` |
|
|
| ## Bioinformatics |
|
|
| ### DNA Strings |
|
|
| | Filename | String Length | Lines Count | |
| | :------------ | ------------: | ----------: | |
| | acgt_100.txt | 100 | 100'000 | |
| | acgt_1k.txt | 1'000 | 100'000 | |
| | acgt_10k.txt | 10'000 | 100'000 | |
| | acgt_100k.txt | 100'000 | 1000 | |
| | acgt_1m.txt | 1'000'000 | 1200 | |
| | acgt_10m.txt | 10'000'000 | 1200 | |
|
|
| Pull them with: |
|
|
| ```sh |
| huggingface-cli download ashvardanian/StringKilla acgt_100.txt |
| huggingface-cli download ashvardanian/StringKilla acgt_1k.txt |
| huggingface-cli download ashvardanian/StringKilla acgt_10k.txt |
| huggingface-cli download ashvardanian/StringKilla acgt_100k.txt |
| huggingface-cli download ashvardanian/StringKilla acgt_1m.txt |
| huggingface-cli download ashvardanian/StringKilla acgt_10m.txt |
| ``` |
|
|
