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<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def from_model(cls, model_name, **kwargs): """ Define a grid using the specifications of a given model. Parameters model_name : string Name the model (see :func:...
settings = _get_model_info(model_name) model = settings.pop('model_name') for k, v in list(kwargs.items()): if k in ('resolution', 'Psurf'): settings[k] = v return cls(model, **settings)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def copy_from_model(cls, model_name, reference, **kwargs): """ Set-up a user-defined grid using specifications of a reference grid model. Parameters model_name :...
if isinstance(reference, cls): settings = reference.__dict__.copy() settings.pop('model') else: settings = _get_model_info(reference) settings.pop('model_name') settings.update(kwargs) settings['reference'] = reference return cls...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_layers(self, Psurf=1013.25, Ptop=0.01, **kwargs): """ Compute scalars or coordinates associated to the vertical layers. Parameters grid_spec : CTMGrid ob...
Psurf = np.asarray(Psurf) output_ndims = Psurf.ndim + 1 if output_ndims > 3: raise ValueError("`Psurf` argument must be a float or an array" " with <= 2 dimensions (or None)") # Compute all variables: takes not much memory, fast # and b...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _get_template_dirs(): """existing directories where to search for jinja2 templates. The order is important. The first found template from the first found dir...
return filter(lambda x: os.path.exists(x), [ # user dir os.path.join(os.path.expanduser('~'), '.py2pack', 'templates'), # system wide dir os.path.join('/', 'usr', 'share', 'py2pack', 'templates'), # usually inside the site-packages dir os.path.join(os.path.dirname(os...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _license_from_classifiers(data): """try to get a license from the classifiers"""
classifiers = data.get('classifiers', []) found_license = None for c in classifiers: if c.startswith("License :: OSI Approved :: "): found_license = c.replace("License :: OSI Approved :: ", "") return found_license
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _normalize_license(data): """try to get SDPX license"""
license = data.get('license', None) if not license: # try to get license from classifiers license = _license_from_classifiers(data) if license: if license in SDPX_LICENSES.keys(): data['license'] = SDPX_LICENSES[license] else: data['license'] = "%s (F...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def wrap_prompts_class(Klass): """ Wrap an IPython's Prompt class This is needed in order for Prompt to inject the correct escape sequences at the right position...
try: from prompt_toolkit.token import ZeroWidthEscape except ImportError: return Klass class ITerm2IPythonPrompt(Klass): def in_prompt_tokens(self, cli=None): return [ (ZeroWidthEscape, last_status(self.shell)+BEFORE_PROMPT), ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_all_keys(self, start=None): """ A generator which yields a list of all valid keys starting at the given `start` offset. If `start` is `None`, we will sta...
s = self.stream if not start: start = HEADER_SIZE + self.block_size * self.root_block s.seek(start) block_type = s.read(2) if block_type == LEAF: reader = LeafReader(self) num_keys = struct.unpack('>i', reader.read(4))[0] for _ in ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def readline(self, fmt=None): """ Return next unformatted "line". If format is given, unpack content, otherwise return byte string. """
prefix_size = self._fix() if fmt is None: content = self.read(prefix_size) else: fmt = self.endian + fmt fmt = _replace_star(fmt, prefix_size) content = struct.unpack(fmt, self.read(prefix_size)) try: suffix_size = self._fix(...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def skipline(self): """ Skip the next line and returns position and size of line. Raises IOError if pre- and suffix of line do not match. """
position = self.tell() prefix = self._fix() self.seek(prefix, 1) # skip content suffix = self._fix() if prefix != suffix: raise IOError(_FIX_ERROR) return position, prefix
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def writelines(self, lines, fmt): """ Write `lines` with given `format`. """
if isinstance(fmt, basestring): fmt = [fmt] * len(lines) for f, line in zip(fmt, lines): self.writeline(f, line, self.endian)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def read_varint(stream): """Read while the most significant bit is set, then put the 7 least significant bits of all read bytes together to create a number. """
value = 0 while True: byte = ord(stream.read(1)) if not byte & 0b10000000: return value << 7 | byte value = value << 7 | (byte & 0b01111111)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def open_bpchdataset(filename, fields=[], categories=[], tracerinfo_file='tracerinfo.dat', diaginfo_file='diaginfo.dat', endian=">", decode_cf=True, memmap=True, ...
store = BPCHDataStore( filename, fields=fields, categories=categories, tracerinfo_file=tracerinfo_file, diaginfo_file=diaginfo_file, endian=endian, use_mmap=memmap, dask_delayed=dask ) ds = xr.Dataset.load_store(store) # Record what the file object underlying the store ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def open_mfbpchdataset(paths, concat_dim='time', compat='no_conflicts', preprocess=None, lock=None, **kwargs): """ Open multiple bpch files as a single dataset. ...
from xarray.backends.api import _MultiFileCloser # TODO: Include file locks? # Check for dask dask = kwargs.pop('dask', False) if not dask: raise ValueError("Reading multiple files without dask is not supported") kwargs['dask'] = True # Add th if isinstance(paths, basestrin...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def image_bytes(b, filename=None, inline=1, width='auto', height='auto', preserve_aspect_ratio=None): """ Return a bytes string that displays image given by byte...
if preserve_aspect_ratio is None: if width != 'auto' and height != 'auto': preserve_aspect_ratio = False else: preserve_aspect_ratio = True data = { 'name': base64.b64encode((filename or 'Unnamed file').encode('utf-8')).decode('ascii'), 'inline': inline, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def display_image_bytes(b, filename=None, inline=1, width='auto', height='auto', preserve_aspect_ratio=None): """ Display the image given by the bytes b in the t...
sys.stdout.buffer.write(image_bytes(b, filename=filename, inline=inline, width=width, height=height, preserve_aspect_ratio=preserve_aspect_ratio)) sys.stdout.write('\n')
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def display_image_file(fn, width='auto', height='auto', preserve_aspect_ratio=None): """ Display an image in the terminal. A newline is not printed. width and he...
with open(os.path.realpath(os.path.expanduser(fn)), 'rb') as f: sys.stdout.buffer.write(image_bytes(f.read(), filename=fn, width=width, height=height, preserve_aspect_ratio=preserve_aspect_ratio))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_entity_uuid_coords(self, uuid): """ Returns the coordinates of the given entity UUID inside this world, or `None` if the UUID is not found. """
if uuid in self._entity_to_region_map: coords = self._entity_to_region_map[uuid] entities = self.get_entities(*coords) for entity in entities: if 'uniqueId' in entity.data and entity.data['uniqueId'] == uuid: return tuple(entity.data['tile...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def create_fuzzy_pattern(pattern): """ Convert a string into a fuzzy regular expression pattern. :param pattern: The input pattern (a string). :returns: A compil...
return re.compile(".*".join(map(re.escape, pattern)), re.IGNORECASE)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fuzzy_search(self, *filters): """ Perform a "fuzzy" search that matches the given characters in the given order. :param filters: The pattern(s) to search for...
matches = [] logger.verbose( "Performing fuzzy search on %s (%s) ..", pluralize(len(filters), "pattern"), concatenate(map(repr, filters)) ) patterns = list(map(create_fuzzy_pattern, filters)) for entry in self.filtered_entries: if all(p.search(entry.name)...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def select_entry(self, *arguments): """ Select a password from the available choices. :param arguments: Refer to :func:`smart_search()`. :returns: The name of a ...
matches = self.smart_search(*arguments) if len(matches) > 1: logger.info("More than one match, prompting for choice ..") labels = [entry.name for entry in matches] return matches[labels.index(prompt_for_choice(labels))] else: logger.info("Matched ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def simple_search(self, *keywords): """ Perform a simple search for case insensitive substring matches. :param keywords: The string(s) to search for. :returns: T...
matches = [] keywords = [kw.lower() for kw in keywords] logger.verbose( "Performing simple search on %s (%s) ..", pluralize(len(keywords), "keyword"), concatenate(map(repr, keywords)), ) for entry in self.filtered_entries: normaliz...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def smart_search(self, *arguments): """ Perform a smart search on the given keywords or patterns. :param arguments: The keywords or patterns to search for. :retu...
matches = self.simple_search(*arguments) if not matches: logger.verbose("Falling back from substring search to fuzzy search ..") matches = self.fuzzy_search(*arguments) if not matches: if len(self.filtered_entries) > 0: raise NoMatchingPasswor...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_diaginfo(diaginfo_file): """ Read an output's diaginfo.dat file and parse into a DataFrame for use in selecting and parsing categories. Parameters diagin...
widths = [rec.width for rec in diag_recs] col_names = [rec.name for rec in diag_recs] dtypes = [rec.type for rec in diag_recs] usecols = [name for name in col_names if not name.startswith('-')] diag_df = pd.read_fwf(diaginfo_file, widths=widths, names=col_names, dtypes=d...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_tracerinfo(tracerinfo_file): """ Read an output's tracerinfo.dat file and parse into a DataFrame for use in selecting and parsing categories. Parameters ...
widths = [rec.width for rec in tracer_recs] col_names = [rec.name for rec in tracer_recs] dtypes = [rec.type for rec in tracer_recs] usecols = [name for name in col_names if not name.startswith('-')] tracer_df = pd.read_fwf(tracerinfo_file, widths=widths, names=col_names, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def read_from_bpch(filename, file_position, shape, dtype, endian, use_mmap=False): """ Read a chunk of data from a bpch output file. Parameters filename : str Pa...
offset = file_position + 4 if use_mmap: d = np.memmap(filename, dtype=dtype, mode='r', shape=shape, offset=offset, order='F') else: with FortranFile(filename, 'rb', endian) as ff: ff.seek(file_position) d = np.array(ff.readline('*f')) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _read(self): """ Helper function to load the data referenced by this bundle. """
if self._dask: d = da.from_delayed( delayed(read_from_bpch, )( self.filename, self.file_position, self.shape, self.dtype, self.endian, use_mmap=self._mmap ), self.shape, self.dtype ) else: ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def close(self): """ Close this bpch file. """
if not self.fp.closed: for v in list(self.var_data): del self.var_data[v] self.fp.close()
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _read_metadata(self): """ Read the main metadata packaged within a bpch file, indicating the output filetype and its title. """
filetype = self.fp.readline().strip() filetitle = self.fp.readline().strip() # Decode to UTF string, if possible try: filetype = str(filetype, 'utf-8') filetitle = str(filetitle, 'utf-8') except: # TODO: Handle this edge-case of converting fi...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _read_var_data(self): """ Iterate over the block of this bpch file and return handlers in the form of `BPCHDataBundle`s for access to the data contained ther...
var_bundles = OrderedDict() var_attrs = OrderedDict() n_vars = 0 while self.fp.tell() < self.fsize: var_attr = OrderedDict() # read first and second header lines line = self.fp.readline('20sffii') modelname, res0, res1, halfpolar, cen...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_timestamp(time=True, date=True, fmt=None): """ Return the current timestamp in machine local time. Parameters: time, date : Boolean Flag to include the t...
time_format = "%H:%M:%S" date_format = "%m-%d-%Y" if fmt is None: if time and date: fmt = time_format + " " + date_format elif time: fmt = time_format elif date: fmt = date_format else: raise ValueError("One of `date` or `tim...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fix_attr_encoding(ds): """ This is a temporary hot-fix to handle the way metadata is encoded when we read data directly from bpch files. It removes the 'scal...
def _maybe_del_attr(da, attr): """ Possibly delete an attribute on a DataArray if it's present """ if attr in da.attrs: del da.attrs[attr] return da def _maybe_decode_attr(da, attr): # TODO: Fix this so that bools get written as attributes just fine """ Pos...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def after_output(command_status): """ Shell sequence to be run after the command output. The ``command_status`` should be in the range 0-255. """
if command_status not in range(256): raise ValueError("command_status must be an integer in the range 0-255") sys.stdout.write(AFTER_OUTPUT.format(command_status=command_status)) # Flushing is important as the command timing feature maybe based on # AFTER_OUTPUT in the future. sys.stdout.fl...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def enforce_cf_variable(var, mask_and_scale=True): """ Given a Variable constructed from GEOS-Chem output, enforce CF-compliant metadata and formatting. Until a ...
var = as_variable(var) data = var._data # avoid loading by accessing _data instead of data dims = var.dims attrs = var.attrs.copy() encoding = var.encoding.copy() orig_dtype = data.dtype # Process masking/scaling coordinates. We only expect a "scale" value # for the units with this ou...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def published(self, check_language=True, language=None, kwargs=None, exclude_kwargs=None): """ Returns all entries, which publication date has been hit or which ...
if check_language: qs = NewsEntry.objects.language(language or get_language()).filter( is_published=True) else: qs = self.get_queryset() qs = qs.filter( models.Q(pub_date__lte=now()) | models.Q(pub_date__isnull=True) ) if kwarg...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def recent(self, check_language=True, language=None, limit=3, exclude=None, kwargs=None, category=None): """ Returns recently published new entries. """
if category: if not kwargs: kwargs = {} kwargs['categories__in'] = [category] qs = self.published(check_language=check_language, language=language, kwargs=kwargs) if exclude: qs = qs.exclude(pk=exclude.pk) r...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_newsentry_meta_description(newsentry): """Returns the meta description for the given entry."""
if newsentry.meta_description: return newsentry.meta_description # If there is no seo addon found, take the info from the placeholders text = newsentry.get_description() if len(text) > 160: return u'{}...'.format(text[:160]) return text
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _requirement_filter_by_marker(req): # type: (pkg_resources.Requirement) -> bool """Check if the requirement is satisfied by the marker. This function checks ...
if hasattr(req, 'marker') and req.marker: marker_env = { 'python_version': '.'.join(map(str, sys.version_info[:2])), 'sys_platform': sys.platform } if not req.marker.evaluate(environment=marker_env): return False return True
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _requirement_find_lowest_possible(req): # type: (pkg_resources.Requirement) -> List[str] """Find lowest required version. Given a single Requirement, this fu...
version_dep = None # type: Optional[str] version_comp = None # type: Optional[str] for dep in req.specs: version = pkg_resources.parse_version(dep[1]) # we don't want to have a not supported version as minimal version if dep[0] == '!=': continue # try to use th...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _ensure_coroutine_function(func): """Return a coroutine function. func: either a coroutine function or a regular function Note a coroutine function is not a ...
if asyncio.iscoroutinefunction(func): return func else: @asyncio.coroutine def coroutine_function(evt): func(evt) yield return coroutine_function
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def location(self): """Return a string uniquely identifying the event. This string can be used to find the event in the event store UI (cf. id attribute, which i...
if self._location is None: self._location = "{}/{}-{}".format( self.stream, self.type, self.sequence, ) return self._location
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: async def find_backwards(self, stream_name, predicate, predicate_label='predicate'): """Return first event matching predicate, or None if none exists. Note: 'bac...
logger = self._logger.getChild(predicate_label) logger.info('Fetching first matching event') uri = self._head_uri try: page = await self._fetcher.fetch(uri) except HttpNotFoundError as e: raise StreamNotFoundError() from e while True: ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def main(): """Command line interface for the ``qpass`` program."""
# Initialize logging to the terminal. coloredlogs.install() # Prepare for command line argument parsing. action = show_matching_entry program_opts = dict(exclude_list=[]) show_opts = dict(filters=[], use_clipboard=is_clipboard_supported()) verbosity = 0 # Parse the command line argument...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def edit_matching_entry(program, arguments): """Edit the matching entry."""
entry = program.select_entry(*arguments) entry.context.execute("pass", "edit", entry.name)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def SVGdocument(): "Create default SVG document" import xml.dom.minidom implementation = xml.dom.minidom.getDOMImplementation() doctype = implementation.createDocumentType( "svg", "-//W3C//DTD SVG 1.1//EN", "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd" ) document= implementation.createDocument(None, "sv...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def polyline(document, coords): "polyline with more then 2 vertices" points = [] for i in range(0, len(coords), 2): points.append("%s,%s" % (coords[i], coords[i+1])) return setattribs( document.createElement('polyline'), points = ' '.join(points), )
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def cubic_bezier(document, coords): "cubic bezier polyline" element = document.createElement('path') points = [(coords[i], coords[i+1]) for i in range(0, len(coords), 2)] path = ["M%s %s" %points[0]] for n in xrange(1, len(points), 3): A, B, C = points[n:n+3] path.append("C%s,%s %s,%s %s,%s" % (A[0], A[1]...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def smoothpolygon(document, coords): "smoothed filled polygon" element = document.createElement('path') path = [] points = [(coords[i], coords[i+1]) for i in range(0, len(coords), 2)] def pt(points): p = points n = len(points) for i in range(0, len(points)): a = p[(i-1) % n] b = p[i] c = p[(i...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def font_actual(tkapp, font): "actual font parameters" tmp = tkapp.call('font', 'actual', font) return dict( (tmp[i][1:], tmp[i+1]) for i in range(0, len(tmp), 2) )
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description:
def parse_dash(string, width): "parse dash pattern specified with string" # DashConvert from {tk-sources}/generic/tkCanvUtil.c w = max(1, int(width + 0.5)) n = len(string) result = [] for i, c in enumerate(string): if c == " " and len(result): result[-1] += w + 1 elif c == "_": result.append(8*w) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def prof_altitude(pressure, p_coef=(-0.028389, -0.0493698, 0.485718, 0.278656, -17.5703, 48.0926)): """ Return altitude for given pressure. This function evaluat...
pressure = np.asarray(pressure) altitude = np.polyval(p_coef, np.log10(pressure.flatten())) return altitude.reshape(pressure.shape)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def prof_pressure(altitude, z_coef=(1.94170e-9, -5.14580e-7, 4.57018e-5, -1.55620e-3, -4.61994e-2, 2.99955)): """ Return pressure for given altitude. This functi...
altitude = np.asarray(altitude) pressure = np.power(10, np.polyval(z_coef, altitude.flatten())) return pressure.reshape(altitude.shape)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _get_model_info(model_name): """ Get the grid specifications for a given model. Parameters model_name : string Name of the model. Supports multiple formats (...
# trying to get as much as possible a valid model name from the given # `model_name`, using regular expressions. split_name = re.split(r'[\-_\s]', model_name.strip().upper()) sep_chars = ('', ' ', '-', '_') gen_seps = itertools.combinations_with_replacement( sep_chars, len(split_name) - 1 ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _get_archive_filelist(filename): # type: (str) -> List[str] """Extract the list of files from a tar or zip archive. Args: filename: name of the archive Retur...
names = [] # type: List[str] if tarfile.is_tarfile(filename): with tarfile.open(filename) as tar_file: names = sorted(tar_file.getnames()) elif zipfile.is_zipfile(filename): with zipfile.ZipFile(filename) as zip_file: names = sorted(zip_file.namelist()) else: ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _augment_book(self, uuid, event): """ Checks if the newly created object is a book and only has an ISBN. If so, tries to fetch the book data off the internet...
try: if not isbnmeta: self.log( "No isbntools found! Install it to get full " "functionality!", lvl=warn) return new_book = objectmodels['book'].find_one({'uuid': uuid}) try: ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def opened(self, *args): """Initiates communication with the remote controlled device. :param args: """
self._serial_open = True self.log("Opened: ", args, lvl=debug) self._send_command(b'l,1') # Saying hello, shortly self.log("Turning off engine, pump and neutralizing rudder") self._send_command(b'v') self._handle_servo(self._machine_channel, 0) self._handle_ser...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def on_machinerequest(self, event): """ Sets a new machine speed. :param event: """
self.log("Updating new machine power: ", event.controlvalue) self._handle_servo(self._machine_channel, event.controlvalue)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def on_rudderrequest(self, event): """ Sets a new rudder angle. :param event: """
self.log("Updating new rudder angle: ", event.controlvalue) self._handle_servo(self._rudder_channel, event.controlvalue)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def on_pumprequest(self, event): """ Activates or deactivates a connected pump. :param event: """
self.log("Updating pump status: ", event.controlvalue) self._set_digital_pin(self._pump_channel, event.controlvalue)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def provisionList(items, database_name, overwrite=False, clear=False, skip_user_check=False): """Provisions a list of items according to their schema :param item...
log('Provisioning', items, database_name, lvl=debug) system_user = None def get_system_user(): """Retrieves the node local system user""" user = objectmodels['user'].find_one({'name': 'System'}) try: log('System user uuid: ', user.uuid, lvl=verbose) retur...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def DefaultExtension(schema_obj, form_obj, schemata=None): """Create a default field"""
if schemata is None: schemata = ['systemconfig', 'profile', 'client'] DefaultExtends = { 'schema': { "properties/modules": [ schema_obj ] }, 'form': { 'modules': { 'items/': form_obj } } ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def copytree(root_src_dir, root_dst_dir, hardlink=True): """Copies a whole directory tree"""
for src_dir, dirs, files in os.walk(root_src_dir): dst_dir = src_dir.replace(root_src_dir, root_dst_dir, 1) if not os.path.exists(dst_dir): os.makedirs(dst_dir) for file_ in files: src_file = os.path.join(src_dir, file_) dst_file = os.path.join(dst_dir, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def delete(ctx, componentname): """Delete an existing component configuration. This will trigger the creation of its default configuration upon next restart."""
col = ctx.obj['col'] if col.count({'name': componentname}) > 1: log('More than one component configuration of this name! Try ' 'one of the uuids as argument. Get a list with "config ' 'list"') return log('Deleting component configuration', componentname, em...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def show(ctx, component): """Show the stored, active configuration of a component."""
col = ctx.obj['col'] if col.count({'name': component}) > 1: log('More than one component configuration of this name! Try ' 'one of the uuids as argument. Get a list with "config ' 'list"') return if component is None: configurations = col.find() fo...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def debugrequest(self, event): """Handler for client-side debug requests"""
try: self.log("Event: ", event.__dict__, lvl=critical) if event.data == "storejson": self.log("Storing received object to /tmp", lvl=critical) fp = open('/tmp/hfosdebugger_' + str( event.user.useruuid) + "_" + str(uuid4()), "w") ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def register_event(self, event): """Registers a new command line interface event hook as command"""
self.log('Registering event hook:', event.cmd, event.thing, pretty=True, lvl=verbose) self.hooks[event.cmd] = event.thing
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def populate_user_events(): """Generate a list of all registered authorized and anonymous events"""
global AuthorizedEvents global AnonymousEvents def inheritors(klass): """Find inheritors of a specified object class""" subclasses = {} subclasses_set = set() work = [klass] while work: parent = work.pop() for child in parent.__subclasses__...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def clear(ctx, schema): """Clears an entire database collection irrevocably. Use with caution!"""
response = _ask('Are you sure you want to delete the collection "%s"' % ( schema), default='N', data_type='bool') if response is True: host, port = ctx.obj['dbhost'].split(':') client = pymongo.MongoClient(host=host, port=int(port)) database = client[ctx.obj['dbname']] ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def provision_system_config(items, database_name, overwrite=False, clear=False, skip_user_check=False): """Provision a basic system configuration"""
from hfos.provisions.base import provisionList from hfos.database import objectmodels default_system_config_count = objectmodels['systemconfig'].count({ 'name': 'Default System Configuration'}) if default_system_config_count == 0 or (clear or overwrite): provisionList([SystemConfigur...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def userlogin(self, event): """Provides the newly authenticated user with a backlog and general channel status information"""
try: user_uuid = event.useruuid user = objectmodels['user'].find_one({'uuid': user_uuid}) if user_uuid not in self.lastlogs: self.log('Setting up lastlog for a new user.', lvl=debug) lastlog = objectmodels['chatlastlog']({ ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def install_docs(instance, clear_target): """Builds and installs the complete HFOS documentation."""
_check_root() def make_docs(): """Trigger a Sphinx make command to build the documentation.""" log("Generating HTML documentation") try: build = Popen( [ 'make', 'html' ], cwd='docs/' ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def install_modules(wip): """Install the plugin modules"""
def install_module(hfos_module): """Install a single module via setuptools""" try: setup = Popen( [ sys.executable, 'setup.py', 'develop' ], cwd='modules/' + hfos_module + "/" ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def install_cert(selfsigned): """Install a local SSL certificate"""
_check_root() if selfsigned: log('Generating self signed (insecure) certificate/key ' 'combination') try: os.mkdir('/etc/ssl/certs/hfos') except FileExistsError: pass except PermissionError: log("Need root (e.g. via sudo) to gen...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def frontend(ctx, dev, rebuild, no_install, build_type): """Build and install frontend"""
install_frontend(instance=ctx.obj['instance'], forcerebuild=rebuild, development=dev, install=not no_install, build_type=build_type)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def install_all(ctx, clear_all): """Default-Install everything installable \b This includes * System user (hfos.hfos) * Self signed certificate * Variable data l...
_check_root() instance = ctx.obj['instance'] dbhost = ctx.obj['dbhost'] dbname = ctx.obj['dbname'] port = ctx.obj['port'] install_system_user() install_cert(selfsigned=True) install_var(instance, clear_target=clear_all, clear_all=clear_all) install_modules(wip=False) install...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def uninstall(): """Uninstall data and resource locations"""
_check_root() response = _ask("This will delete all data of your HFOS installations! Type" "YES to continue:", default="N", show_hint=False) if response == 'YES': shutil.rmtree('/var/lib/hfos') shutil.rmtree('/var/cache/hfos')
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def update(ctx, no_restart, no_rebuild): """Update a HFOS node"""
# 0. (NOT YET! MAKE A BACKUP OF EVERYTHING) # 1. update repository # 2. update frontend repository # 3. (Not yet: update venv) # 4. rebuild frontend # 5. restart service instance = ctx.obj['instance'] log('Pulling github updates') run_process('.', ['git', 'pull', 'origin', 'maste...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _build_model_factories(store): """Generate factories to construct objects from schemata"""
result = {} for schemaname in store: schema = None try: schema = store[schemaname]['schema'] except KeyError: schemata_log("No schema found for ", schemaname, lvl=critical, exc=True) try: result[schemaname] = warmongo.model_factory(schema...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _build_collections(store): """Generate database collections with indices from the schemastore"""
result = {} client = pymongo.MongoClient(host=dbhost, port=dbport) db = client[dbname] for schemaname in store: schema = None indices = None try: schema = store[schemaname]['schema'] indices = store[schemaname].get('indices', None) except Key...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def initialize(address='127.0.0.1:27017', database_name='hfos', instance_name="default", reload=False): """Initializes the database connectivity, schemata and fi...
global schemastore global l10n_schemastore global objectmodels global collections global dbhost global dbport global dbname global instance global initialized if initialized and not reload: hfoslog('Already initialized and not reloading.', lvl=warn, emitter="DB", frame...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def profile(schemaname='sensordata', profiletype='pjs'): """Profiles object model handling with a very simple benchmarking test"""
db_log("Profiling ", schemaname) schema = schemastore[schemaname]['schema'] db_log("Schema: ", schema, lvl=debug) testclass = None if profiletype == 'warmongo': db_log("Running Warmongo benchmark") testclass = warmongo.model_factory(schema) elif profiletype == 'pjs': ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _check_collections(self): """Checks node local collection storage sizes"""
self.collection_sizes = {} self.collection_total = 0 for col in self.db.collection_names(include_system_collections=False): self.collection_sizes[col] = self.db.command('collstats', col).get( 'storageSize', 0) self.collection_total += self.collection_siz...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _check_free_space(self): """Checks used filesystem storage sizes"""
def get_folder_size(path): """Aggregates used size of a specified path, recursively""" total_size = 0 for item in walk(path): for file in item[2]: try: total_size = total_size + getsize(join(item[0], file)) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def send_mail_worker(config, mail, event): """Worker task to send out an email, which blocks the process unless it is threaded"""
log = "" try: if config.mail_ssl: server = SMTP_SSL(config.mail_server, port=config.mail_server_port, timeout=30) else: server = SMTP(config.mail_server, port=config.mail_server_port, timeout=30) if config.mail_tls: log += 'Starting TLS\n' ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def reload_configuration(self, event): """Reload the current configuration and set up everything depending on it"""
super(EnrolManager, self).reload_configuration(event) self.log('Reloaded configuration.') self._setup()
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def change(self, event): """An admin user requests a change to an enrolment"""
uuid = event.data['uuid'] status = event.data['status'] if status not in ['Open', 'Pending', 'Accepted', 'Denied', 'Resend']: self.log('Erroneous status for enrollment requested!', lvl=warn) return self.log('Changing status of an enrollment', uuid, 'to', statu...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def changepassword(self, event): """An enrolled user wants to change their password"""
old = event.data['old'] new = event.data['new'] uuid = event.user.uuid # TODO: Write email to notify user of password change user = objectmodels['user'].find_one({'uuid': uuid}) if std_hash(old, self.salt) == user.passhash: user.passhash = std_hash(new, se...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def invite(self, event): """A new user has been invited to enrol by an admin user"""
self.log('Inviting new user to enrol') name = event.data['name'] email = event.data['email'] method = event.data['method'] self._invite(name, method, email, event.client.uuid, event)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def enrol(self, event): """A user tries to self-enrol with the enrolment form"""
if self.config.allow_registration is False: self.log('Someone tried to register although enrolment is closed.') return self.log('Client trying to register a new account:', event, pretty=True) # self.log(event.data, pretty=True) uuid = event.client.uuid ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def status(self, event): """An anonymous client wants to know if we're open for enrollment"""
self.log('Registration status requested') response = { 'component': 'hfos.enrol.enrolmanager', 'action': 'status', 'data': self.config.allow_registration } self.fire(send(event.client.uuid, response))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def request_reset(self, event): """An anonymous client requests a password reset"""
self.log('Password reset request received:', event.__dict__, lvl=hilight) user_object = objectmodels['user'] email = event.data.get('email', None) email_user = None if email is not None and user_object.count({'mail': email}) > 0: email_user = user_object.find_one...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def captcha_transmit(self, captcha, uuid): """Delayed transmission of a requested captcha"""
self.log('Transmitting captcha') response = { 'component': 'hfos.enrol.enrolmanager', 'action': 'captcha', 'data': b64encode(captcha['image'].getvalue()).decode('utf-8') } self.fire(send(uuid, response))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _invite(self, name, method, email, uuid, event, password=""): """Actually invite a given user"""
props = { 'uuid': std_uuid(), 'status': 'Open', 'name': name, 'method': method, 'email': email, 'password': password, 'timestamp': std_now() } enrollment = objectmodels['enrollment'](props) enrollment.s...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _create_user(self, username, password, mail, method, uuid): """Create a new user and all initial data"""
try: if method == 'Invited': config_role = self.config.group_accept_invited else: config_role = self.config.group_accept_enrolled roles = [] if ',' in config_role: for item in config_role.split(','): ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _send_invitation(self, enrollment, event): """Send an invitation mail to an open enrolment"""
self.log('Sending enrollment status mail to user') self._send_mail(self.config.invitation_subject, self.config.invitation_mail, enrollment, event)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _send_acceptance(self, enrollment, password, event): """Send an acceptance mail to an open enrolment"""
self.log('Sending acceptance status mail to user') if password is not "": password_hint = '\n\nPS: Your new password is ' + password + ' - please change it after your first login!' acceptance_text = self.config.acceptance_mail + password_hint else: accepta...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def add_auth_hook(self, event): """Register event hook on reception of add_auth_hook-event"""
self.log('Adding authentication hook for', event.authenticator_name) self.auth_hooks[event.authenticator_name] = event.event
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _fail(self, event, message='Invalid credentials'): """Sends a failure message to the requesting client"""
notification = { 'component': 'auth', 'action': 'fail', 'data': message } ip = event.sock.getpeername()[0] self.failing_clients[ip] = event Timer(3, Event.create('notify_fail', event.clientuuid, notification, ip)).register(self)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _login(self, event, user_account, user_profile, client_config): """Send login notification to client"""
user_account.lastlogin = std_now() user_account.save() user_account.passhash = "" self.fireEvent( authentication(user_account.name, ( user_account, user_profile, client_config), event.clientuuid, user_ac...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _handle_autologin(self, event): """Automatic logins for client configurations that allow it"""
self.log("Verifying automatic login request") # TODO: Check for a common secret # noinspection PyBroadException try: client_config = objectmodels['client'].find_one({ 'uuid': event.requestedclientuuid }) except Exception: cl...