code stringlengths 1 1.72M | language stringclasses 1
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# $Id$
from module_base import ModuleBase
from module_mixins import FilenameViewModuleMixin
import module_utils
import vtk
class ivWRT(FilenameViewModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent constructor
ModuleBase.__init__(self, module_manager)
self._write... | Python |
# $Id$
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
import wx # need this for wx.SAVE
class metaImageWRT(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent constructor
ModuleBase.__ini... | Python |
class batchConverter:
kits = ['vtk_kit', 'wx_kit']
cats = ['Readers','Writers','Converters']
keywords = ['batch','convert','read','write','vti','mha','gipl']
help = """Batch converts image volume files from one type to another.
Source and target types can be VTK ImageData (.vti), MetaImage (.mha),
... | Python |
# BatchConverter.py by Francois Malan - 2010-03-05. Updated 2011-12-11#
import os.path
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import wx
import os
import vtk
import itk
class batchConverter(
ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manag... | Python |
# dumy __init__ so this directory can function as a package
| Python |
# $Id$
from module_base import ModuleBase
from module_mixins import FilenameViewModuleMixin
import module_utils
import vtk
class cptBrepWRT(FilenameViewModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent constructor
ModuleBase.__init__(self, module_manager)
self... | Python |
# $Id$
from module_base import ModuleBase
from module_mixins import FilenameViewModuleMixin
import module_utils
import vtk
class stlWRT(FilenameViewModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent constructor
ModuleBase.__init__(self, module_manager)
# need to... | Python |
# $Id$
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
import wx # needs this for wx.OPEN, we need to make this constant available
# elsewhere
class pngWRT(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class nbhSeedConnect(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, ... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class nbCurvesLevelSet(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, mo... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class curvatureFlowDenoising(ScriptedConfigModuleMixin, ModuleBase):
def __init_... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class curvatureAnisotropicDiffusion(ScriptedConfigModuleMixin, ModuleBase):
def __in... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class confidenceSeedConnect(ScriptedConfigModuleMixin, ModuleBase):
... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class fastMarching(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class sigmoid(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manag... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class symmetricDemonsRegistration(ScriptedConfigModuleMixin, ModuleBase):
def __init_... | Python |
# $Id$
from genMixins import subjectMixin, updateCallsExecuteModuleMixin
class transformStackClass(list,
subjectMixin,
updateCallsExecuteModuleMixin):
def __init__(self, d3Module):
# call base ctors
subjectMixin.__init__(self)
update... | Python |
# dumy __init__ so this directory can function as a package
| Python |
# $Id$
from genMixins import subjectMixin, updateCallsExecuteModuleMixin
class imageStackClass(list,
subjectMixin,
updateCallsExecuteModuleMixin):
def __init__(self, d3Module):
# call base ctors
subjectMixin.__init__(self)
updateCallsExecute... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
from module_base import ModuleBase
import module_kits.itk_kit
from module_mixins import ScriptedConfigModuleMixin
class gradientAnisotropicDiffusion(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, mo... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import vtk
class VTKtoITK(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self,... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
# TODO:
# * this module is not sensitive to changes in its inputs... it should
# register observers and run _createPipelines if/when they change.
from imageStackRDR import imageStackClass
from module_base import ModuleBase
... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class cannyEdgeDetection(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, m... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class demonsRegistration(ScriptedConfigModuleMixin, ModuleBase):
def __init__(se... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import copy
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import wx
class ITKReader(ScriptedConfigModuleMixin, ModuleBase):
def __i... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class gaussianConvolve(ScriptedConfigModuleMixin, ModuleBase):
_orders = ['Zero', 'F... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
from typeModules.transformStackClass import transformStackClass
import cPickle
from module_base import ModuleBase
from module_mixins import FilenameViewModuleMixin
import module_utils
import wx
import vtk
class transformStack... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
# mini-changelog
# * added work-around for empty input bug in ITK 3.20
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import itk
import module_kits.itk_kit as itk_kit
class isolatedCon... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import vtk
class ITKtoVTK(NoConfigModuleMixin, ModuleBase):
"""Convert ITK 3D float data to... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import gen_utils
import module_kits.itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class watershed(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, mo... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
class ITKtoVTK:
kits = ['itk_kit']
cats = ['Insight']
help = """Use this module to convert from any ITK image type to
the corresponding VTK type.
"""
class VTKtoITK:
kits = ['itk_kit']
cats = ['Ins... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class DanielssonDistance(ScriptedConfigModuleMixin, ModuleBase):
def __init__(se... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import vtk
class VTKtoITKF3(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
ModuleBase.__init__(se... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class geodesicActiveContour(ScriptedConfigModuleMixin, ModuleBase):
def __init__(se... | Python |
# dumy __init__ so this directory can function as a package
| Python |
# dumy __init__ so this directory can function as a package
| Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class gradientMagnitudeGaussian(ScriptedConfigModuleMixin, ModuleBase):
def __init__... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class levelSetMotionRegistration(ScriptedConfigModuleMixin, ModuleBase):
def __init__... | Python |
# dumy __init__ so this directory can function as a package
| Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
from typeModules.transformStackClass import transformStackClass
import cPickle
import fixitk as itk
import md5
from module_base import ModuleBase
from module_mixins import FilenameViewModuleMixin
import module_utils
import wx
... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class gvfgac(ScriptedConfigModuleMixin, ModuleBase):
"""Module for performing Gradie... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
class discreteLaplacian(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_ma... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
# TODO:
# * if the input imageStackRDR is reconfigured to read a different stack
# by the user, then things will break. We probably have to add an observer
# and adapt to the new situation.
# * ditto for the input transfo... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import FilenameViewModuleMixin
import re
class ITKWriter(FilenameViewModuleMixin, ModuleBase):
def __init__(self, modu... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
class tpgac(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manag... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
from typeModules.imageStackClass import imageStackClass
import fixitk as itk
from module_base import ModuleBase
from module_mixins import FileOpenDialogModuleMixin
import module_utils
import wx
class imageStackRDR(ModuleBase,... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtktud
class imageEigenvectors(ModuleBase, NoConfigModuleMixin):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_manager)
... | Python |
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
from wxPython import wx
class VTKtoPRTools(ScriptedConfigModuleMixin, ModuleBase):
"""Module to convert multi-component VTK image data to PRTools-compatible
dataset.
$Revision: 1.1 $
"""
def __init__(self, mod... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtktud
class imageGradientStructureTensor(ModuleBase, NoConfigModuleMixin):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_... | Python |
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class testModule(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_manager)
# we'll be playing ... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtktud
class imageCurvature(ModuleBase, NoConfigModuleMixin):
"""Calculates image curvature with VTKTUD vtkImageCurvature filter.
You need 8 inputs, and in the following sequence: d... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import wx
import vtk
import vtkdevide
class modifyHomotopySlow(NoConfigModuleMixin, ModuleBase):
"""
WARNING, WARNING, DANGER WILL ROBINSON: this filter exists purely
for experimental purp... | Python |
from module_mixins import simpleVTKClassModuleBase
import vtk
import vtkdevide
class imageBorderMask(simpleVTKClassModuleBase):
def __init__(self, module_manager):
simpleVTKClassModuleBase.__init__(
self, module_manager,
vtkdevide.vtkImageBorderMask(), 'Creating border mask.',
... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
import vtkdevide
class imageBacktracker(NoConfigModuleMixin, ModuleBase):
"""JORIK'S STUFF.
"""
def __init__(self, module_manager):
# call parent constructor
M... | Python |
# $Id: pngWRT.py 2401 2006-12-20 20:29:15Z cpbotha $
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
WX_OPEN = 1
WX_SAVE = 2
class isolated_points_check(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent c... | Python |
# $Id$
import fixitk as itk
import gen_utils
from module_base import ModuleBase
import module_utils
import module_utilsITK
from module_mixins import ScriptedConfigModuleMixin
class hessianDoG(ScriptedConfigModuleMixin, ModuleBase):
"""Calculates Hessian matrix of volume by convolution with second and
cross de... | Python |
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class testModule2(NoConfigModuleMixin, ModuleBase):
"""Resample volume according to 4x4 homogeneous transform.
"""
def __init__(self, module_manager):
# initialise our base class
... | Python |
# EmphysemaViewerFrame by Corine Slagboom & Noeska Smit
# Description
#
# Based on SkeletonAUIViewerFrame:
# Copyright (c) Charl P. Botha, TU Delft.
# All rights reserved.
# See COPYRIGHT for details.
import cStringIO
from vtk.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor
import wx
# wxPython 2.8.... | Python |
class EmphysemaViewer:
kits = ['vtk_kit']
cats = ['Viewers']
help = """Module to visualize lungemphysema from a CT-thorax scan and a lung mask.
EmphysemaViewer consists of a volume rendering and two linked slice-based views; one with the original data and one with an emphysema overlay. The volume rende... | Python |
# EmphysemaViewer by Corine Slagboom & Noeska Smit
#
#
# Based on SkeletonAUIViewer:
# Copyright (c) Charl P. Botha, TU Delft.
# All rights reserved.
# See COPYRIGHT for details.
# skeleton of an AUI-based viewer module
# copy and modify for your own purposes.
# set to False for 3D viewer, True for 2D image viewer
I... | Python |
# Copyright (c) Charl P. Botha, TU Delft.
# All rights reserved.
# See COPYRIGHT for details.
# ---------------------------------------
# Edited by Corine Slagboom & Noeska Smit to add possibility of adding overlay to the sliceviewer and some special synching.
# And by edited we mean mutilated :)
from module_kits.vtk_... | Python |
from module_mixins import simpleVTKClassModuleBase
import vtktud
class imageKnutssonMapping(simpleVTKClassModuleBase):
"""This is the minimum you need to wrap a single VTK object. This
__doc__ string will be replaced by the __doc__ string of the encapsulated
VTK object, i.e. vtkStripper in this case.
... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
import vtktud
class MyGlyph3D(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, mod... | Python |
# $Id: module_index.py 1894 2006-02-23 08:55:45Z cpbotha $
class MyGaussian:
kits = ['vtk_kit']
cats = ['User','Optic Flow']
keywords = ['gaussian', 'source']
| Python |
# dummy __init__ so that this dir will be seen as package. | Python |
# muscleLinesToSurface copyright (c) 2003 Charl P. Botha http://cpbotha.net/
# $Id$
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class muscleLinesToSurface(ModuleBase, NoConfigModuleMixin):
"""Given muscle centre lines marked with 0-valued voxels,... | Python |
from module_mixins import simpleVTKClassModuleBase
import vtktud
class imageExtentUnionizer(simpleVTKClassModuleBase):
"""This is the minimum you need to wrap a single VTK object. This
__doc__ string will be replaced by the __doc__ string of the encapsulated
VTK object, i.e. vtkStripper in this case.
... | Python |
# $Id$
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtktud
class gaussianKernel(ScriptedConfigModuleMixin, ModuleBase):
"""First test of a gaussian implicit kernel
$Revision: 1.1 $
"""
def __init__(self, module_manager):
... | Python |
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
import wx
class myImageClip(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
ModuleBase.__init__(self, module_manager)
self._clipper = vtk.vtkImageClip()... | Python |
# $Id$
class simplestVTKExample:
kits = ['vtk_kit']
cats = ['User']
class isolated_points_check:
kits = ['vtk_kit']
cats = ['User']
class testModule:
kits = ['vtk_kit']
cats = ['User']
| Python |
from module_mixins import simpleVTKClassModuleBase
import vtktud
class imageCopyPad(simpleVTKClassModuleBase):
"""This is the minimum you need to wrap a single VTK object. This
__doc__ string will be replaced by the __doc__ string of the encapsulated
VTK object, i.e. vtkStripper in this case.
With th... | Python |
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class reconstructSurface(ModuleBase, NoConfigModuleMixin):
"""Given a binary volume, fit a surface through the marked points.
A doubleThreshold could be used to extract points of interest from
a... | Python |
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtktud
import wx
class imageSepConvolution(ScriptedConfigModuleMixin, ModuleBase):
"""
lksajflksjdf
"""
def __init__(self, module_manager):
# initialise our base class
... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtktud
class imageCurvatureMagnitude(ModuleBase, NoConfigModuleMixin):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_manag... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class DilateExample(ScriptedConfigModuleMixin, ModuleBase):
"""Performs a greyscale 3D dilation on the input.
$Revision: 1.2 $
"""
def __init__(self, module_... | Python |
# $Id: module_index.py 1894 2006-02-23 08:55:45Z cpbotha $
class DilateExample:
kits = ['vtk_kit']
cats = ['User','Cartilage3D']
| Python |
from module_kits.vtk_kit.mixins import SimpleVTKClassModuleBase
import vtk
class simplestVTKExample(SimpleVTKClassModuleBase):
"""This is the minimum you need to wrap a single VTK object. This
__doc__ string will be replaced by the __doc__ string of the encapsulated
VTK object, i.e. vtkStripper in this ca... | Python |
# $Id$
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtktud
class cubicBCSplineKernel(ScriptedConfigModuleMixin, ModuleBase):
"""First test of a cubic B-Spline implicit kernel
$Revision: 1.1 $
"""
def __init__(self, module_manag... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import wx
import vtk
class myTubeFilter(ScriptedConfigModuleMixin, ModuleBase):
"""Simple demonstration of ScriptedConfigModuleMixin-based
wrapping of a single VTK object.
It would ... | Python |
# $Id$
# workaround to use adodbapi and other modules not
# included with DeVIDE
#import sys
#sys.path = sys.path + ['', 'H:\\bld\\bin\\Wrapping\\CSwig\\Python\\RelWithDebInfo', 'H:\\opt\\python23\\Lib\\site-packages\\adodbapi', 'C:\\WINNT\\System32\\python23.zip', 'H:\\', 'H:\\opt\\python23\\DLLs', 'H:\\opt\\python2... | Python |
# this is (possibly broken) code to perform a marker-based watershed
# segmentation on a mesh by making use of a pre-segmentation
# modification of curvature homotopy
# test this on some synthetic data (cube with markers on all six faces)
# before you use it for anything serious.
# IDEA:
# use vtkPolyDataConnectivity... | Python |
import itk
import module_kits.itk_kit as itk_kit
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import math
class BSplineRegistration(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
ModuleBase.__init__(self, module_manager)
... | Python |
# dumy __init__ so this directory can function as a package
| Python |
# surfaceToDistanceField copyright (c) 2004 by Charl P. Botha cpbotha.net
# $Id$
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class surfaceToDistanceField(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_ma... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import IntrospectModuleMixin
import module_utils
import vtk
class doubleThreshold(IntrospectModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent constructor
ModuleBase.__init__(self, module_manager)
... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
import input_array_choice_mixin # need this for constants
reload(input_array_choice_mixin)
from input_array_... | Python |
# Copyright (c) Charl P. Botha, TU Delft
# All rights reserved.
# See COPYRIGHT for details.
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class ICPTransform(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
... | Python |
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class contour(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# call parent constructor
ModuleBase.__init__(self, module_manager)
self._conto... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class appendPolyData(NoConfigModuleMixin, ModuleBase):
_numInputs = 5
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, ... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class imageGreyDilate(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_mana... | Python |
# TODO: simplify module!! all this muck was necessary due to the old
# demand-driven model. Keep the code around, it could be used as
# illustrative case.
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
import vtkdevide
class modifyHom... | Python |
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class ShephardMethod(ScriptedConfigModuleMixin, ModuleBase):
"""Apply Shepard Method to input.
"""
def __init__(self, module_manager):
# initialise our base class
... | Python |
# decimateFLT.py copyright (c) 2003 by Charl P. Botha http://cpbotha.net/
# $Id$
# module that triangulates and decimates polygonal input
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
import gen_utils
from module_base import Modul... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class polyDataNormals(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_manager)
... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import wx
import vtk
class imageFlip(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_manage... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
class imageGreyErode(ScriptedConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_mana... | Python |
from module_base import ModuleBase
from module_mixins import vtkPipelineConfigModuleMixin
import module_utils
import vtk
class contourFLTBase(ModuleBase, vtkPipelineConfigModuleMixin):
def __init__(self, module_manager, contourFilterText):
# call parent constructor
ModuleBase.__init__(self, modul... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import ScriptedConfigModuleMixin
import module_utils
import vtk
OPS = ['add', 'subtract', 'multiply', 'divide', 'invert',
'sin', 'cos', 'exp', 'log', 'abs', 'sqr', 'sqrt', 'min',
'max', 'atan', 'atan2', 'multiply by k', 'add c', 'conj... | Python |
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import vtk
class transformImageToTarget(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module_manager)
... | Python |
import gen_utils
from module_base import ModuleBase
from module_mixins import NoConfigModuleMixin
import module_utils
import wx
import vtk
class imageGradientMagnitude(NoConfigModuleMixin, ModuleBase):
def __init__(self, module_manager):
# initialise our base class
ModuleBase.__init__(self, module... | Python |
Subsets and Splits
SQL Console for ajibawa-2023/Python-Code-Large
Provides a useful breakdown of language distribution in the training data, showing which languages have the most samples and helping identify potential imbalances across different language groups.