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<|fim_prefix|># repo: WebSpider/pyheos path: /pyheos/group.py from pyheos import HEOSException, get_message_parts import sys def get_groups(heosobj, command, data): """CLI 4.3.1""" from datetime import datetime heosobj.save_groups(data, datetime.now()) def get_group_info(heosobj, command, data): ...
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{ "lang": "python", "repo": "WebSpider/pyheos", "path": "/pyheos/group.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_prefix|># repo: alexjunq/kolibri path: /kolibri/auth/test/test_permissions.py t3(self): """ FacilityUsers can't remove Facilities, regardless of their roles """ self.assertFalse(self.learner1.has_perm('auth.remove_facility')) def test_remove_facility_pt4(self): """ Raises exception i...
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{ "lang": "python", "repo": "alexjunq/kolibri", "path": "/kolibri/auth/test/test_permissions.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: alexjunq/kolibri path: /kolibri/auth/test/test_permissions.py d_coach(coach2) admin = FacilityUser.objects.create(username='boss_hogg') facility.add_admin(admin) learner1, learner2 = (FacilityUser.objects.create(username='student1'), Facilit...
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{ "lang": "python", "repo": "alexjunq/kolibri", "path": "/kolibri/auth/test/test_permissions.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def test_remove_learner_specific_for_admin(self): self.assertTrue(self.admin.has_perm(self.AUTH_REMOVE_LEARNER, self.learner_groups[0])) def test_remove_learner_specific_for_coach_pt1(self): """ Coaches can remove Learners for their own LearnerGroups """ self.assertTrue(se...
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{ "lang": "python", "repo": "alexjunq/kolibri", "path": "/kolibri/auth/test/test_permissions.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> # init metrics service self.metricService = metrics.Metrics() # init transporter self.transporter = transport.Transporter(config, self.actionService) # init notifier self.notifier = notifier.Notifier(self.transporter) # init tracing self.tracing = tracing.Tracing(self.tr...
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{ "lang": "python", "repo": "keymetrics/pm2-io-apm-python", "path": "/pm2_io_apm_python/pm2io.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: keymetrics/pm2-io-apm-python path: /pm2_io_apm_python/pm2io.py import threading from .services import actions from .services import metrics from .services import status from .services import transport from .classes import metric as mmetric from .classes import action as maction from .features ...
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{ "lang": "python", "repo": "keymetrics/pm2-io-apm-python", "path": "/pm2_io_apm_python/pm2io.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> # init tracing self.tracing = tracing.Tracing(self.transporter) def start(self): # start status interval thread threading.Thread(target=self.statusInterval, args=( self.config, self.transporter, self.metricService, self.actionService, )).start() self.tra...
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{ "lang": "python", "repo": "keymetrics/pm2-io-apm-python", "path": "/pm2_io_apm_python/pm2io.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: jahrome/tabview path: /tabview/tabview.py else: self.win_y = self.win_y + 1 def up(): if self.y == 0: if self.win_y > 0: self.win_y = self.win_y - 1 else: self.y = self.y - 1 ...
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{ "lang": "python", "repo": "jahrome/tabview", "path": "/tabview/tabview.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def resize(self): """Handle terminal resizing""" # Check if screen was re-sized (True or False) resize = self.max_x == 0 or \ curses.is_term_resized(self.max_y, self.max_x) if resize is True: self.recalculate_layout() curses.resizeter...
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{ "lang": "python", "repo": "jahrome/tabview", "path": "/tabview/tabview.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: jahrome/tabview path: /tabview/tabview.py xp = x * self.column_width + x * self.column_gap if x < self.num_columns: w = min(self.max_x, self.column_width) else: w = self.max_x - xp return xp, w def keys(self): """Define methods fo...
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{ "lang": "python", "repo": "jahrome/tabview", "path": "/tabview/tabview.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> with pytest.raises(AssertionError): # Wasted too much time trying to get this to work properly so we just assert that an error is thrown. parse_user_function_call("my_func b='thing with spaces'") with pytest.raises(NameError): parse_user_function_call("my_func aaa bbb=3.1"...
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{ "lang": "python", "repo": "petered/dead_easy_ui", "path": "/dead_easy_ui/test_ui_console_menu.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: petered/dead_easy_ui path: /dead_easy_ui/test_ui_console_menu.py from __future__ import print_function from __future__ import absolute_import import pytest from dead_easy_ui.ui_console_menu import parse_user_function_call def test_parse_command_args(): <|fim_suffix|> assert parse_user_funct...
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{ "lang": "python", "repo": "petered/dead_easy_ui", "path": "/dead_easy_ui/test_ui_console_menu.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def test_AMWG_execute_not_completed(self): start_year = 51 end_year = 55 self.config['global']['project_path'] = '/p/cscratch/acme/baldwin32/20171016/' self.config['global']['exeriment'] = '20171011.beta2_FCT2-icedeep_branch.A_WCYCL1850S.ne30_oECv3_ICG.edison' y...
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{ "lang": "python", "repo": "KelvinFkr2015/acme_processflow", "path": "/jobs/test_amwg.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> start_year = 51 end_year = 55 self.config['global']['project_path'] = '/p/cscratch/acme/baldwin32/20171016/' self.config['global']['exeriment'] = '20171011.beta2_FCT2-icedeep_branch.A_WCYCL1850S.ne30_oECv3_ICG.edison' year_set_string = '{start:04d}-{end:04d}'.format...
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{ "lang": "python", "repo": "KelvinFkr2015/acme_processflow", "path": "/jobs/test_amwg.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: KelvinFkr2015/acme_processflow path: /jobs/test_amwg.py import os import unittest import shutil from AMWGDiagnostic import AMWGDiagnostic from configobj import ConfigObj from JobStatus import JobStatus from lib.events import Event_list class TestAMWGDiagnostic(unittest.TestCase): def __i...
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{ "lang": "python", "repo": "KelvinFkr2015/acme_processflow", "path": "/jobs/test_amwg.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: yinzhe1989/real-time-news path: /rtnews/feed/async_newsevent.py import aioredis import pandas as pd from datetime import datetime import lxml.html from lxml.html import builder as E from lxml import etree import asyncio import time import os import sys import traceback from rtnews im...
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{ "lang": "python", "repo": "yinzhe1989/real-time-news", "path": "/rtnews/feed/async_newsevent.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> logger.info('Closing redis...') redis.close() await redis.wait_closed() if __name__ == '__main__': #try: # fh = logging.handlers.RotatingFileHandler(ct.FEED_LOG_FILE, mode='a', maxBytes=1024*1024*10, backupCount=2, encoding='utf-8', delay=False) #except: # fh = l...
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{ "lang": "python", "repo": "yinzhe1989/real-time-news", "path": "/rtnews/feed/async_newsevent.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: IntegralProgrammer/NeuralCR path: /tests/test_template/data_driven_api_test.py #!/usr/bin/env python # -*- coding: utf-8 -*- import json import os import sys import requests from nested_lookup import nested_update URL_FILE = "url" RESULT_FILE = "result" f_url = open(URL_FILE, 'r') URL_DATA = f...
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{ "lang": "python", "repo": "IntegralProgrammer/NeuralCR", "path": "/tests/test_template/data_driven_api_test.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> print("=== BEGIN ACTUAL ===") print(compare_actual) print("=== END ACTUAL ===") if "AUTOTEST" in os.environ: if os.environ["AUTOTEST"] != "": raise err sys.exit(-1)<|fim_prefix|># repo: IntegralProgrammer/NeuralCR path: /tests/test_template/data_driven_api_test.py #!/usr/bin/env python # -*- co...
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{ "lang": "python", "repo": "IntegralProgrammer/NeuralCR", "path": "/tests/test_template/data_driven_api_test.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|>try: assert compare_actual == compare_expected except AssertionError as err: print("=== BEGIN EXPECTED ===") print(compare_expected) print("=== END EXPECTED ===") print("=== BEGIN ACTUAL ===") print(compare_actual) print("=== END ACTUAL ===") if "AUTOTEST" in os.environ: if os.environ["AUTOTES...
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{ "lang": "python", "repo": "IntegralProgrammer/NeuralCR", "path": "/tests/test_template/data_driven_api_test.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: chenmich/learn_rnn_tensorflow path: /large_data_preparation.py # class RawDataLine(): def __init__(self, token, lines): self.token = token self.lines = lines example_map = {ExampleType.prediction: AllForFile.prediction_record, ExampleType.test: AllForFile.test_r...
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{ "lang": "python", "repo": "chenmich/learn_rnn_tensorflow", "path": "/large_data_preparation.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|> volumn_lines = lines[0:, self.__feature_size__ - 1 :] stat_volumn.num = len(input_lines + target_lines) stat_volumn.mean = np.mean(volumn_lines) stat_volumn.std = np.std(volumn_lines) #With the existing stat combination combinate_stat_price = _combinate_sta...
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{ "lang": "python", "repo": "chenmich/learn_rnn_tensorflow", "path": "/large_data_preparation.py", "mode": "spm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_prefix|># repo: chenmich/learn_rnn_tensorflow path: /large_data_preparation.py Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applic...
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{ "lang": "python", "repo": "chenmich/learn_rnn_tensorflow", "path": "/large_data_preparation.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|> with open(os.path.join(args.output_dir, 'unlabel10per_'+str(seed)+'.json'),'w') as f: for line in dataset[num+1:]: f.writelines(json.dumps(line,ensure_ascii=False)) f.write("\n")<|fim_prefix|># repo: zjunlp/LREBench path: /sample_10.py import json import numpy as np im...
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{ "lang": "python", "repo": "zjunlp/LREBench", "path": "/sample_10.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: zjunlp/LREBench path: /sample_10.py import json import numpy as np import argparse import os parser = argparse.ArgumentParser() parser.add_argument("--input_dir", "-i", type=str, required=True, help="The directory of the training file.") parser.add_argument('--output_dir'...
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{ "lang": "python", "repo": "zjunlp/LREBench", "path": "/sample_10.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: tpopenfoose/OptionSuite path: /strategyManager/strategy.py class Strategy(object): """This class sets up the basics for every strategy that will be used; For example, if we want to do an iron condor or a strangle, there are certain parameters that must be defined. Attributes: ...
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{ "lang": "python", "repo": "tpopenfoose/OptionSuite", "path": "/strategyManager/strategy.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> return self.__daysBeforeClose def getExpCycle(self): return self.__expCycle def getOptimalDTE(self): return self.__optimalDTE def getMinimumDTE(self): return self.__minimumDTE def getROC(self): return self.__roc def getMinDaysToEar...
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{ "lang": "python", "repo": "tpopenfoose/OptionSuite", "path": "/strategyManager/strategy.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: yindaheng98/LittleProgramSet path: /排队论大作业程序/generate_data.py import numpy as np import json import pathlib from MMnSimulator import MMnSimulator from nMM1Simulator import nMM1Simulator from nEnM1Simulator import nEnM1Simulator from nMM1ShortSimulator import nMM1ShortSimulator from common import ...
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{ "lang": "python", "repo": "yindaheng98/LittleProgramSet", "path": "/排队论大作业程序/generate_data.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|>miu = 1 for n in n_list: data = { 'MMn': {'simulate': [], 'theory': []}, 'nMM1': {'simulate': [], 'theory': []}, 'nEnM1': {'simulate': [], 'theory': []}, 'nMM1Short': {'simulate': []}, } for rho in rho_list: _miu = miu _lambda = rho * _miu * n ...
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{ "lang": "python", "repo": "yindaheng98/LittleProgramSet", "path": "/排队论大作业程序/generate_data.py", "mode": "spm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|> wgtedVals = np.zeros((nTimeSteps, nOutPolys)) matDataVals = np.zeros((nTimeSteps, nOutPolys, maxOverlaps)) # reformat var data into regular matrix matching weights format (nOutPolygons, maxOverlaps) # used advanced indexing to extract matching input grid indices for p in range(0, ...
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{ "lang": "python", "repo": "nmizukami/cmip5_oconus_analysis", "path": "/scripts/basin_average/remap_vic_output.py", "mode": "spm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|> for varname, meta in var_meta.items(): foo = xr.DataArray(remapped_data[varname][:, remap_idx], dims=['time', 'basinID'], name=varname) foo.encoding = var_encodings[varname] foo.attrs = var_attrs[varname] dataset[varn...
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{ "lang": "python", "repo": "nmizukami/cmip5_oconus_analysis", "path": "/scripts/basin_average/remap_vic_output.py", "mode": "spm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_prefix|># repo: nmizukami/cmip5_oconus_analysis path: /scripts/basin_average/remap_vic_output.py #!/usr/bin/env python ''' Process timeseries grid into mean areal timeseries for arbitrary polygons Depends on mapping file (i,j version) from poly2poly.py Rewritten from earlier script pieces to use vectoriz...
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{ "lang": "python", "repo": "nmizukami/cmip5_oconus_analysis", "path": "/scripts/basin_average/remap_vic_output.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|> alpha = 0.5 l1_ratio = 0.5 model = ElasticNet(alpha=alpha, l1_ratio=l1_ratio, random_state=kwargs['random_state']) model.fit(X_train, y_train) return model, mlflow_run def eval_model(**kwargs): print("Evaluate Model") # paths src_path = os.pat...
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{ "lang": "python", "repo": "tspthomas/fsdl2021_project", "path": "/src/pipelines/dags/winequality/train_elastic_net_end2end.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: tspthomas/fsdl2021_project path: /src/pipelines/dags/winequality/train_elastic_net_end2end.py import os import numpy as np import pandas as pd from sklearn.linear_model import ElasticNet from sklearn.model_selection import train_test_split from sklearn.metrics import mean_squared_error, mean_abs...
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{ "lang": "python", "repo": "tspthomas/fsdl2021_project", "path": "/src/pipelines/dags/winequality/train_elastic_net_end2end.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def train_model(**kwargs): print("Train Model") # paths src_path = os.path.join(kwargs['dest'], kwargs['name']) # load training data X_train = load_numpy_array(src_path, kwargs['X_train_filename']) y_train = load_numpy_array(src_path, kwargs['y_train_filename']) # create or...
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{ "lang": "python", "repo": "tspthomas/fsdl2021_project", "path": "/src/pipelines/dags/winequality/train_elastic_net_end2end.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: 13Nuse/poi path: /poi/user/migrations/0003_auto_20180918_1257.py # Generated by Django 2.1.1 on 2018-09-18 16:57 <|fim_suffix|> class Migration(migrations.Migration): dependencies = [ migrations.swappable_dependency(settings.AUTH_USER_MODEL), ('user', '0002_auto_20180917_133...
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{ "lang": "python", "repo": "13Nuse/poi", "path": "/poi/user/migrations/0003_auto_20180918_1257.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> dependencies = [ migrations.swappable_dependency(settings.AUTH_USER_MODEL), ('user', '0002_auto_20180917_1330'), ] operations = [ migrations.RenameModel( old_name='User', new_name='Users', ), ]<|fim_prefix|># repo: 13Nuse/poi path: ...
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{ "lang": "python", "repo": "13Nuse/poi", "path": "/poi/user/migrations/0003_auto_20180918_1257.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> operations = [ migrations.RenameModel( old_name='User', new_name='Users', ), ]<|fim_prefix|># repo: 13Nuse/poi path: /poi/user/migrations/0003_auto_20180918_1257.py # Generated by Django 2.1.1 on 2018-09-18 16:57 <|fim_middle|>from django.conf import setti...
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{ "lang": "python", "repo": "13Nuse/poi", "path": "/poi/user/migrations/0003_auto_20180918_1257.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: GeographicaGS/GeoLibs-Dator path: /dator/datastorages/__init__.py from dator.datastorages.bigquery import BigQuery from dator.datastorages.carto import CARTO from dator.datastorages.csv import CSV from dator.datastorages.pos<|fim_suffix|> 'carto': CARTO, 'csv': CSV, 'postgresql...
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{ "lang": "python", "repo": "GeographicaGS/GeoLibs-Dator", "path": "/dator/datastorages/__init__.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> 'carto': CARTO, 'csv': CSV, 'postgresql': PostgreSQL } )<|fim_prefix|># repo: GeographicaGS/GeoLibs-Dator path: /dator/datastorages/__init__.py from dator.datastorages.bigquery import BigQuery from dator.datastorages.carto <|fim_middle|>import CARTO from dator.datastorages.csv imp...
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{ "lang": "python", "repo": "GeographicaGS/GeoLibs-Dator", "path": "/dator/datastorages/__init__.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: hesscl/helena path: /utilities/runHelenaScript.py # usage: python runHelenaDocker.py <helenaScriptNumericId> <numParallelBrowsers> <timeoutInHours> <howManyRunsToAllowPerWorker> # ex: python runHelenaDocker.py 651 3 23.75 1000 # ex: python runHelenaDocker.py 927 1 1 1 # ex: python runHelenaDocker...
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{ "lang": "python", "repo": "hesscl/helena", "path": "/utilities/runHelenaScript.py", "mode": "psm", "license": "BSD-2-Clause", "source": "the-stack-v2" }
<|fim_suffix|> class RunProgramProcess(Process): def __init__(self, profile, programId, optionStr, numTriesSoFar=0): super(RunProgramProcess, self).__init__() self.profile = profile self.programId = programId self.optionStr = optionStr self.numTriesSoFar = numTriesSoFar ...
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{ "lang": "python", "repo": "hesscl/helena", "path": "/utilities/runHelenaScript.py", "mode": "spm", "license": "BSD-2-Clause", "source": "the-stack-v2" }
<|fim_suffix|> def joinProcesses(procs, timeoutInSeconds): pnum = len(procs) bool_list = [True]*pnum start = time.time() while time.time() - start <= timeoutInSeconds: for i in range(pnum): bool_list[i] = procs[i].is_alive() if np.any(bool_list): time.sleep(5) ...
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{ "lang": "python", "repo": "hesscl/helena", "path": "/utilities/runHelenaScript.py", "mode": "spm", "license": "BSD-2-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: Brimizer/python-ant path: /ant/core/message.py elif self.type_ == MESSAGE_CHANNEL_PERIOD: # msg = ChannelPeriodMessage() # elif self.type_ == MESSAGE_CHANNEL_SEARCH_TIMEOUT: # msg = ChannelSearchTimeoutMessage() # elif self.type_ == MESSAGE_CHANNEL_FREQUENC...
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{ "lang": "python", "repo": "Brimizer/python-ant", "path": "/ant/core/message.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> ChannelMessage.__init__(self, msg_id=MESSAGE_CHANNEL_PERIOD, payload=b'\x00' * 2, number=number) self.setChannelPeriod(period) def getChannelPeriod(self): return struct.unpack('<H', self.get_payload()[1:3])[0] def setChannelPeriod(self, per...
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{ "lang": "python", "repo": "Brimizer/python-ant", "path": "/ant/core/message.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> class ChannelMessage(Message): def __init__(self, msg_id, payload=b'', number=0x00): Message.__init__(self, msg_id, b'\x00' + payload) self.setChannelNumber(number) def get_channel_number(self): return self._payload[0] def setChannelNumber(self, number): if (...
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{ "lang": "python", "repo": "Brimizer/python-ant", "path": "/ant/core/message.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: justTill/whereToLunch path: /app/main/controller/logic/absenceLogic.py import structlog from main.model.persistence import AbsenceDAO from utils.enum import Reasons from utils.date import dateManager logger = structlog.getLogger(__name__) class AbsenceLogic: absence_DAO = AbsenceDAO() ...
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{ "lang": "python", "repo": "justTill/whereToLunch", "path": "/app/main/controller/logic/absenceLogic.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def get_active_absent_absences_from_team(self, team): logger.debug("get active absent absences") current_vote_day = dateManager.current_vote_day() absences = self.absence_DAO.get_absences_from_team_for_reason(Reasons.ABSENT, team) active_absences = [] for absenc...
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{ "lang": "python", "repo": "justTill/whereToLunch", "path": "/app/main/controller/logic/absenceLogic.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: xapple/fasta path: /fasta/tests/test_validation.py #!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Written by Lucas Sinclair. MIT Licensed. Contact at www.sinclair.bio This file contains tests to be run automatically with the pytest executable. To run all the tests just type the following on...
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{ "lang": "python", "repo": "xapple/fasta", "path": "/fasta/tests/test_validation.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> invalid_file = this_dir + "data/invalid.fastq" from fasta import FASTQ fastq = FASTQ(invalid_file) assert not fastq.validator(False)<|fim_prefix|># repo: xapple/fasta path: /fasta/tests/test_validation.py #!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Written by Lucas...
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{ "lang": "python", "repo": "xapple/fasta", "path": "/fasta/tests/test_validation.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def test_validation(self): valid_file = this_dir + "data/seqs.fastq" from fasta import FASTQ fastq = FASTQ(valid_file) assert fastq.validator() def test_invalid(self): invalid_file = this_dir + "data/invalid.fastq" from fasta import FASTQ fa...
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{ "lang": "python", "repo": "xapple/fasta", "path": "/fasta/tests/test_validation.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|># Test unknown command. lines = expect_failure(["foo"], ["ERROR: Invalid command: foo"]) expect_failure(["-e", instance.etc_dir, "foo"], lines) expect_failure(["-e" + instance.etc_dir, "foo"], lines) expect_failure(["-i", "main", "foo"], ...
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{ "lang": "python", "repo": "jensl/critic", "path": "/testing/tests/001-main/001-empty/003-criticctl/001-basic.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: jensl/critic path: /testing/tests/001-main/001-empty/003-criticctl/001-basic.py def expect_success(argv, expected_output_lines=[]): try: output = instance.criticctl(argv) except testing.CriticctlError as error: logger.error("'criticctl %s': correct criticctl usage failed:\...
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{ "lang": "python", "repo": "jensl/critic", "path": "/testing/tests/001-main/001-empty/003-criticctl/001-basic.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: GabrielEValenzuela/CursoIntensivoPython path: /Segunda clase/Código fuente/matrix.py import random as rd FILAS = 4 COLUMNAS = 3 <|fim_suffix|>for i in range(FILAS): for j in range(COLUMNAS): matrix[i][j] = rd.randint(0,(FILAS*COLUMNAS)) #Para matrices se usa el primer ...
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{ "lang": "python", "repo": "GabrielEValenzuela/CursoIntensivoPython", "path": "/Segunda clase/Código fuente/matrix.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|>for i in range(FILAS): for j in range(COLUMNAS): matrix[i][j] = rd.randint(0,(FILAS*COLUMNAS)) #Para matrices se usa el primer #[] para fila y el segundo [] la columna print('Matrix modificada {0}'.format(matrix))<|fim_prefix|># repo: GabrielEValenzuela/CursoIntensivoPython p...
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{ "lang": "python", "repo": "GabrielEValenzuela/CursoIntensivoPython", "path": "/Segunda clase/Código fuente/matrix.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> }, 'expert': { 'db': 'inno_park', 'tables': ['expert', 'expert_skill', 'expert_work'], 'ref': [] }, 'person': { 'db': 'inno_park', 'tables': ['person', 'person_family', 'person_school'], 'ref': [] ...
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{ "lang": "python", "repo": "343829084/argo", "path": "/bootstrap/inno_park.py", "mode": "spm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_prefix|># repo: 343829084/argo path: /bootstrap/inno_park.py #!/usr/bin/env python # -*- coding: utf-8 -*- settings = { '_project_': 'park', '_Project_': 'Park', '_company_': 'inno', 'company': 'inno', 'Company': 'Inno', '_output_': 'E:\\stuff\\gen', '_dburl_': 'mysql://root:123456@1...
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{ "lang": "python", "repo": "343829084/argo", "path": "/bootstrap/inno_park.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_suffix|> 'system': { 'db': 'inno_park', 'tables': ['sys_user'], 'ref': [] } }, '_mobile_': { }, '_pc_': { 'news': { 'db': 'inno_park', 'tables': ['kit', 'post'] }, 'proposal': { 'db': 'inno_par...
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{ "lang": "python", "repo": "343829084/argo", "path": "/bootstrap/inno_park.py", "mode": "spm", "license": "Apache-2.0", "source": "the-stack-v2" }
<|fim_prefix|># repo: tianer2820/Subtitles-for-Images path: /src/main.py from color_reader import load_colors, str2color from paragraph import Paragraph, TextBlock from settings_loader import load_settings from subtitle_reader import load_subtitle from utilities import get_best_font_size, load_font import os import P...
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{ "lang": "python", "repo": "tianer2820/Subtitles-for-Images", "path": "/src/main.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> img = PIL.Image.open(join(img_dir, img_list[page])) print('image loaded') img: Image width = img.width name_font = load_font(join(current_dir, try_get(settings, 'name_font', 'fonts/FZY3JW.TTF', quiet=True)), int(get_best_font_size(width...
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{ "lang": "python", "repo": "tianer2820/Subtitles-for-Images", "path": "/src/main.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: vmrob/needy path: /needy/commands/dev/render.py import textwrap from ... import command from ...needy import ConfiguredNeedy class RenderCommand(command.Command): def name(self): <|fim_suffix|> def add_parser(self, group): parser = group.add_parser( self.name(), ...
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{ "lang": "python", "repo": "vmrob/needy", "path": "/needy/commands/dev/render.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def execute(self, arguments): with ConfiguredNeedy('.', arguments) as needy: print(needy.render(needy.target(arguments.target))) return 0<|fim_prefix|># repo: vmrob/needy path: /needy/commands/dev/render.py import textwrap from ... import command from ...needy import Conf...
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{ "lang": "python", "repo": "vmrob/needy", "path": "/needy/commands/dev/render.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> with ConfiguredNeedy('.', arguments) as needy: print(needy.render(needy.target(arguments.target))) return 0<|fim_prefix|># repo: vmrob/needy path: /needy/commands/dev/render.py import textwrap from ... import command from ...needy import ConfiguredNeedy class RenderCommand(...
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{ "lang": "python", "repo": "vmrob/needy", "path": "/needy/commands/dev/render.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: amylebar/BatCan path: /li_ion/li_ion_battery_p2d_model.py istent('IDA_YA_YDP_INIT') t_ch, SV_ch, SV_dot_ch = sim_ch.simulate(t_f) SV_ch_df = Label_Columns(t_ch, SV_ch, an.npoints, sep.npoints, cat.npoints) if Inputs....
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{ "lang": "python", "repo": "amylebar/BatCan", "path": "/li_ion/li_ion_battery_p2d_model.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: amylebar/BatCan path: /li_ion/li_ion_battery_p2d_model.py if Inputs.plot_potential_profiles == 1: plot_potential(tags['Phi_an'], tags['Phi_cat'], SV_dch_df, 'Discharging', 1+(Inputs.flag_re_equil*Inputs.phi_time), fig1, axes1) if Inputs.plo...
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{ "lang": "python", "repo": "amylebar/BatCan", "path": "/li_ion/li_ion_battery_p2d_model.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_suffix|> """Algebraic equation for electrolyte potential""" res[offset + ptr['Phi']] = i_io_m - i_io_p # %% """=================================================================""" """===========================CATHODE===============================""" offsets = cat.offsets;...
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{ "lang": "python", "repo": "amylebar/BatCan", "path": "/li_ion/li_ion_battery_p2d_model.py", "mode": "spm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: dgafiulov/flowofcolors path: /rainbow.py import pygame import random #:) pygame.init() #win settings width = 1500 height = 900 x = 0 y = 0 z = 1 y1 = height x1 = 0 r1 = random.randint(0, 255) g1 = random.randint(0, 255) b1 = random.randint(0, 255) <|fim_suffix|>#other settings run = True ...
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{ "lang": "python", "repo": "dgafiulov/flowofcolors", "path": "/rainbow.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|>countR = r2 - r1 countG = g2 - g1 countB = b2 - b1 numberR = countR / width numberG = countG / width numberB = countB / width #other settings run = True #functions win = pygame.display.set_mode((width, height)) pygame.display.flip() while run: for event in pygame.event.get(): if event.type == pyga...
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{ "lang": "python", "repo": "dgafiulov/flowofcolors", "path": "/rainbow.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: telminov/park-worker-base path: /parkworker/task_processor.py # coding: utf-8 import json import sys import os import traceback from bson import json_util from parkworker.const import LEVEL_OK, LEVEL_FAIL, TASK_TYPE_MONIT, TASK_TYPE_WORK from parkworker.utils import now class DuplicatedNameEx...
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{ "lang": "python", "repo": "telminov/park-worker-base", "path": "/parkworker/task_processor.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> base_dir = os.getcwd() root_module_name = base_dir.split('/')[-1] package_dir = base_dir + '/%s' % package_name if os.path.isdir(package_dir): for module_path in os.listdir(package_dir): if not module_path.endswith('.py'): con...
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{ "lang": "python", "repo": "telminov/park-worker-base", "path": "/parkworker/task_processor.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> result = TaskResult( level=LEVEL_FAIL, extra={ 'description': str(ex), 'exception_type': str(type(ex)), 'stack_trace': traceback.format_exc(), } ) return result @staticmethod def _get_clas...
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{ "lang": "python", "repo": "telminov/park-worker-base", "path": "/parkworker/task_processor.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> parser = argparse.ArgumentParser( description='Changes the provider of specified PreprintService objects' ) parser.add_argument( '--dry', action='store_true', dest='dry_run', help='Run migration and roll back changes to db', ) parser.add_argument...
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{ "lang": "python", "repo": "hmoco/osf.io", "path": "/scripts/migration/migrate_preprints_across_providers.py", "mode": "spm", "license": "BSD-2-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: hmoco/osf.io path: /scripts/migration/migrate_preprints_across_providers.py import argparse import json import logging from framework.mongo import database from framework.transactions.context import TokuTransaction from scripts import utils as script_utils from website.app import init_app logge...
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{ "lang": "python", "repo": "hmoco/osf.io", "path": "/scripts/migration/migrate_preprints_across_providers.py", "mode": "psm", "license": "BSD-2-Clause", "source": "the-stack-v2" }
<|fim_suffix|> dependencies = [ ('portal', '0015_remove_location_other_features_bucket'), ] operations = [ migrations.AlterField( model_name='location', name='language_1', field=models.CharField(max_length=200, verbose_name=b'Language 1 (other than English...
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{ "lang": "python", "repo": "smartchicago/chicago-early-learning", "path": "/python/ecep/portal/migrations/0016_auto_20161023_1952.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: smartchicago/chicago-early-learning path: /python/ecep/portal/migrations/0016_auto_20161023_1952.py # -*- coding: utf-8 -*- from __future__ import unicode_literals from django.db import models, migrations class Migration(migrations.Migration): <|fim_suffix|> operations = [ migratio...
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{ "lang": "python", "repo": "smartchicago/chicago-early-learning", "path": "/python/ecep/portal/migrations/0016_auto_20161023_1952.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: cl33per/myKungFu path: /python/dice.py from random import randint <|fim_suffix|>def rolldice(dieSides): diceroll = dieSides[randint(0,5)] return diceroll print (f'{rolldice(dieSides)}')<|fim_middle|>dieSides = [1,2,3,4,5,6]
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{ "lang": "python", "repo": "cl33per/myKungFu", "path": "/python/dice.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|>print (f'{rolldice(dieSides)}')<|fim_prefix|># repo: cl33per/myKungFu path: /python/dice.py from random import randint dieSides = [1,2,3,4,5,6] <|fim_middle|>def rolldice(dieSides): diceroll = dieSides[randint(0,5)] return diceroll
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{ "lang": "python", "repo": "cl33per/myKungFu", "path": "/python/dice.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: cl33per/myKungFu path: /python/dice.py from random import randint dieSides = [1,2,3,4,5,6] def rolldice(dieSides): <|fim_suffix|>print (f'{rolldice(dieSides)}')<|fim_middle|> diceroll = dieSides[randint(0,5)] return diceroll
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{ "lang": "python", "repo": "cl33per/myKungFu", "path": "/python/dice.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> # Test end date that is out of bounds. The end date should be the data set end date with 1 hour added to it. start_end_dates_new = rd._get_start_end_dates_planetos( start_date="2001-09-01 01:00", end_date=None, num_years=20, start_date_ds=start_date_ds_merra2, ...
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{ "lang": "python", "repo": "NREL/OpenOA", "path": "/test/unit/test_reanalysis_downloading_toolkit.py", "mode": "spm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: NREL/OpenOA path: /test/unit/test_reanalysis_downloading_toolkit.py import pandas as pd import pytest from operational_analysis.toolkits import reanalysis_downloading as rd def test_get_dataset_names(): dataset_names = {"merra2": "nasa_merra2_global", "era5": "ecmwf_era5_v2"} assert r...
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{ "lang": "python", "repo": "NREL/OpenOA", "path": "/test/unit/test_reanalysis_downloading_toolkit.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_suffix|> # print(find_SCA) # Should print the document # print(find_California) # Should print as "None" # -------------------------------------------------- print('------------------------------------') # Undo everything you did in the previous step using remove and update. # Validate wh...
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{ "lang": "python", "repo": "EricNg314/Code-Drills", "path": "/Python_Scraping-and-Document-DBs/day-01/01-MongoDB/unsolved/basics.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: EricNg314/Code-Drills path: /Python_Scraping-and-Document-DBs/day-01/01-MongoDB/unsolved/basics.py # Import your dependencies: # You'll need pymongo # Including us_land that we've provided. # Declare a variable called "us_info" and set it equal to the us_info data in us_land.py # ---...
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{ "lang": "python", "repo": "EricNg314/Code-Drills", "path": "/Python_Scraping-and-Document-DBs/day-01/01-MongoDB/unsolved/basics.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> # print(find_California) # Should print as "None" # -------------------------------------------------- print('------------------------------------') # Undo everything you did in the previous step using remove and update. # Validate whether info was updated properly by uncommenting the ...
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{ "lang": "python", "repo": "EricNg314/Code-Drills", "path": "/Python_Scraping-and-Document-DBs/day-01/01-MongoDB/unsolved/basics.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> return { "name": name, "histogram": { "field": field, "interval": interval } }<|fim_prefix|># repo: briankarlberg/grip path: /gripql/python/gripql/aggregations.py from __future__ import absolute_import, print_function, unicode_literals <|fim_middle|>def term(...
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{ "lang": "python", "repo": "briankarlberg/grip", "path": "/gripql/python/gripql/aggregations.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: briankarlberg/grip path: /gripql/python/gripql/aggregations.py from __future__ import absolute_import, print_function, unicode_literals def term(name, field, size=None): agg = { "name": name, "term": {"field": field} } if size: agg["term"]["size"] = size ...
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{ "lang": "python", "repo": "briankarlberg/grip", "path": "/gripql/python/gripql/aggregations.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: riccardopoiani/pricing-and-advertising-machine-learning path: /bandit/combinatiorial/CombinatorialBandit.py from copy import copy import numpy as np from abc import ABC from typing import List from advertising.data_structure.Campaign import Campaign from advertising.optimizers.CampaignOptimize...
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{ "lang": "python", "repo": "riccardopoiani/pricing-and-advertising-machine-learning", "path": "/bandit/combinatiorial/CombinatorialBandit.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> :return: the indices of the best budgets given the actual campaign """ if value_per_clicks is None: value_per_clicks = np.ones(shape=self.campaign.get_n_sub_campaigns()) temp_campaign: Campaign = copy(self.campaign) temp_campaign.multiply_sub_campaign_v...
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{ "lang": "python", "repo": "riccardopoiani/pricing-and-advertising-machine-learning", "path": "/bandit/combinatiorial/CombinatorialBandit.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: jctissier/CreateGMapMarkers path: /GMapMarkers.py import json import requests from pprint import pprint from bs4 import BeautifulSoup import gmplot import webbrowser import time class CreateGoogleMapMarkers(object): API_KEY = '' # Set API Key def __init__(self, center_lat, center_l...
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{ "lang": "python", "repo": "jctissier/CreateGMapMarkers", "path": "/GMapMarkers.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> def set_purple_markers(self, f): if len(self.purple_lats) == len(self.purple_longs) and (len(self.purple_lats) and len(self.purple_longs)) != 0: if len(self.purple_titles) != 0: self.add_locations_info(f, self.purple_lats, self.purple_longs, ...
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{ "lang": "python", "repo": "jctissier/CreateGMapMarkers", "path": "/GMapMarkers.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: shapiromatron/hawc path: /hawc/apps/epiv2/mixins.py from django.db import models from rest_framework import serializers from .models import Design class SameDesignSerializerMixin: """ ex: when updating an ExposureLevel, there's a related Chemical and Exposure sometimes passed into the ...
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{ "lang": "python", "repo": "shapiromatron/hawc", "path": "/hawc/apps/epiv2/mixins.py", "mode": "psm", "license": "MIT", "source": "the-stack-v2" }
<|fim_suffix|> invalid_fields = {} for param_name, model_klass in self.same_design_fields: if param_name in self.initial_data: candidate_id = self.initial_data.get(param_name) candidate_obj = model_klass.objects.get(id=candidate_id) ...
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{ "lang": "python", "repo": "shapiromatron/hawc", "path": "/hawc/apps/epiv2/mixins.py", "mode": "spm", "license": "MIT", "source": "the-stack-v2" }
<|fim_prefix|># repo: OpenChemistry/tomviz path: /tomviz/python/BinaryThreshold.py import tomviz.operators class BinaryThreshold(tomviz.operators.CancelableOperator): def transform(self, dataset, lower_threshold=40.0, upper_threshold=255.0): """This filter computes a binary threshold on the data set and...
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{ "lang": "python", "repo": "OpenChemistry/tomviz", "path": "/tomviz/python/BinaryThreshold.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_suffix|> try: threshold_filter.Update() except RuntimeError: return returnValue self.progress.message = "Creating child data set" # Set the output as a new child data object of the current data set label_map_dataset = dat...
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{ "lang": "python", "repo": "OpenChemistry/tomviz", "path": "/tomviz/python/BinaryThreshold.py", "mode": "spm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_suffix|> # Approximate percentage of work completed after each step in the # transform STEP_PCT = [20, 40, 75, 90, 100] # Set up return value returnValue = None # Try imports to make sure we have everything that is needed try: self.progress.mess...
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{ "lang": "python", "repo": "OpenChemistry/tomviz", "path": "/tomviz/python/BinaryThreshold.py", "mode": "spm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: ooici/pyon path: /pyon/container/procs.py , process_id, process_cfg) # PROCESS TYPE. Determines basic process context (messaging, service interface) # One of the constants defined at the top of this file service_cls = named_any("%s.%s" % (module, cls)) process_ty...
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{ "lang": "python", "repo": "ooici/pyon", "path": "/pyon/container/procs.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: ooici/pyon path: /pyon/container/procs.py ess_instance.id) # map gproc to process_instance self._spawned_proc_to_process[proc.proc] = process_instance # set service's reference to process process_instance._process = proc # Now call the on_init of the age...
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{ "lang": "python", "repo": "ooici/pyon", "path": "/pyon/container/procs.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_suffix|> """ Spawn a process acting as immediate one off process. No attachments. """ process_instance = self._create_process_instance(process_id, name, module, cls, config, proc_attr) self._process_init(process_instance) self._process_start(process_instance)...
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{ "lang": "python", "repo": "ooici/pyon", "path": "/pyon/container/procs.py", "mode": "spm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: RNAer/micronota path: /micronota/util.py r''' Utility functionality ===================== .. currentmodule:: micronota.util This module (:mod:`micronota.util`) provides various utility functionality, ''' # ---------------------------------------------------------------------------- # Copyright...
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{ "lang": "python", "repo": "RNAer/micronota", "path": "/micronota/util.py", "mode": "psm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_suffix|> Examples -------- Let's create a file object that has sequences separated by "//" at the end of each record (similar to multiple GenBank records in a file): >>> import io >>> s = """seq1 ... AT ... // ... seq2 ... ATGC ... // ... """ >>> f = io.StringIO...
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{ "lang": "python", "repo": "RNAer/micronota", "path": "/micronota/util.py", "mode": "spm", "license": "BSD-3-Clause", "source": "the-stack-v2" }
<|fim_prefix|># repo: google/grr path: /grr/config/grr_response_templates/setup.py #!/usr/bin/env python """This package contains GRR client templates.""" import configparser import glob import os import re import shutil from setuptools import setup from setuptools.command.sdist import sdist THIS_DIRECTORY = os.pat...
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{ "lang": "python", "repo": "google/grr", "path": "/grr/config/grr_response_templates/setup.py", "mode": "psm", "license": "Apache-2.0", "source": "the-stack-v2" }