text stringlengths 185 73.3k | repo stringlengths 7 100 | path stringlengths 4 146 | language stringclasses 7
values | hash stringlengths 16 16 | score float64 7 8.5 | stars int64 0 237k |
|---|---|---|---|---|---|---|
"""Add end_position column to books table.
Revision ID: 043
Revises: 042
"""
from collections.abc import Sequence
import sqlalchemy as sa
from alembic import op
revision: str = "043"
down_revision: str | Sequence[str] | None = "042"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] |... | Crossbill-App/crossbill-web | backend/alembic/versions/043_add_end_position_to_books.py | .py | 144eb86b41b740cd | 7.57 | 13 |
"""Drop cover column from books table.
The cover URL was deterministic (/api/v1/books/{id}/cover) and derived from the
book ID at runtime. It is no longer stored in the database.
Revision ID: 046
Revises: 045
"""
from collections.abc import Sequence
import sqlalchemy as sa
from alembic import op
revision: str = "... | Crossbill-App/crossbill-web | backend/alembic/versions/046_drop_cover_column_from_books.py | .py | dc606dee0e5e306c | 7.57 | 13 |
"""add questions to chapter prereading contents
Revision ID: 039
Revises: 038
Create Date: 2026-03-16
"""
from collections.abc import Sequence
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
from alembic import op
# revision identifiers, used by Alembic.
revision: str = "047"
down_revision: str... | Crossbill-App/crossbill-web | backend/alembic/versions/047_add_questions_to_chapter_prereading_contents.py | .py | 5957cac4f9912ef0 | 7.57 | 13 |
# /// script
# requires-python = ">=3.12"
# ///
"""Validate every committed example catalog with rashid, upstream sources included.
examples/catalog/ holds the canonical examples of a conformant Portolan catalog,
committed in full, Parquet and COG included. This runs rashid over each of them.
The data pass is left on... | portolan-sdi/portolan-spec | examples/tools/check_catalogs.py | .py | e025b83ad1bc1799 | 7.42 | 6 |
"""Small shared helpers, subprocess runner, checksums, and value formatting."""
from __future__ import annotations
import hashlib
import subprocess
from pathlib import Path
from typing import Any
def run(cmd: list[str], **kw: Any) -> subprocess.CompletedProcess:
kw.setdefault("check", True)
kw.setdefault("te... | portolan-sdi/portolan-spec | examples/tools/common.py | .py | 89ae70ae79e9aa94 | 7.42 | 6 |
"""Coordinate reference system detection and resolution.
Detects the true source CRS of each geospatial source and resolves the output
CRS, which preserves the source by default and is overridable per manifest or
per collection. Nothing about the CRS is hardcoded in the rest of the generator.
"""
from __future__ impor... | portolan-sdi/portolan-spec | examples/tools/crs.py | .py | 80edc1d79d0d5946 | 7.42 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = ["pyyaml>=6.0.3"]
# ///
"""Publish a built example catalog to the Portolan repository on Source Cooperative.
examples/manifests/*.yaml each describe one whole catalog, and build.py turns a
manifest into a complete catalog tree under examples/catalog/<stem>/. T... | portolan-sdi/portolan-spec | examples/tools/publish_catalogs.py | .py | 249532adeb8105f3 | 7.42 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "duckdb>=1.5.5",
# "rasterio>=1.5",
# "rio-cogeo>=5.3",
# "numpy",
# ]
# ///
"""Standalone check for convert.to_cog on rio-cogeo.
Covers the two rules formats.md raises to MUSTs on top of a valid COG, per OGC
21-026's Optimized GeoTIFF requirements... | portolan-sdi/portolan-spec | examples/tools/tests/check_cog.py | .py | 22479a08e86c150d | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "pyyaml>=6.0.3",
# "duckdb>=1.5.5",
# "jsonschema>=4.26.0",
# "pyarrow>=25",
# "geoparquet-io @ git+https://github.com/yharby/geoparquet-io.git@f27e53108910f19bd74a9ff4be5c7d97b104753c",
# "rasterio>=1.5",
# "numpy",
# "Pillow>=11",
# "rio... | portolan-sdi/portolan-spec | examples/tools/tests/check_compliance.py | .py | 072d49c7fcf65a40 | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "duckdb>=1.5.5",
# "pandas>=2.2",
# "pyarrow>=25",
# "geopandas>=1.1",
# "rioxarray>=0.17",
# "rasterio>=1.5",
# ]
# ///
"""Run every fenced code block in the committed catalog docs.
The documentation best-practices page asks that every example... | portolan-sdi/portolan-spec | examples/tools/tests/check_docs.py | .py | 999942d6d3c0142b | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = []
# ///
"""Standalone check for fetch.fetch's caching rule.
core.md requires an asset's file:size and file:checksum to be regenerated at
publish time so they match the bytes actually published. A source the manifest
marks `stable: false` is a live endpoint wh... | portolan-sdi/portolan-spec | examples/tools/tests/check_fetch.py | .py | 914ec64af2d2376c | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "duckdb>=1.5.5",
# ]
# ///
"""Standalone check for the MapLibre styles author_styles writes.
formats.md requires a PMTiles style to be "a complete, self-contained JSON
loadable directly by MapLibre GL JS", and states the convention that
`sources.data.url... | portolan-sdi/portolan-spec | examples/tools/tests/check_styles.py | .py | 6a398eb22dd65918 | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "duckdb>=1.5.5",
# "rasterio>=1.5",
# "numpy",
# "Pillow>=11",
# ]
# ///
"""Standalone check for the pure-Python vector and raster thumbnail path.
Seeds the tile cache so no network is hit, builds tiny sources, and asserts each
thumbnail PNG exists... | portolan-sdi/portolan-spec | examples/tools/tests/check_thumbnails.py | .py | 315fe07e72c5f692 | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "numpy",
# "Pillow>=11",
# ]
# ///
"""Standalone check for tiles.fetch_basemap.
Exercises the pure zoom/tile math and mosaics a pre-seeded tile cache with no
network, so the test needs neither GDAL nor internet.
Run: uv run examples/tools/tests/check_t... | portolan-sdi/portolan-spec | examples/tools/tests/check_tiles.py | .py | be35fee190ee4e19 | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = [
# "jsonschema>=4.26.0",
# "rashid[data]>=0.1.8,<0.2.0",
# ]
# ///
"""Standalone checks for the rashid validation adapter.
Run:
uv run examples/tools/tests/check_validate.py
"""
import json
import sys
from pathlib import Path
sys.path.insert(0, str(P... | portolan-sdi/portolan-spec | examples/tools/tests/check_validate.py | .py | 666dc6ff7e11a410 | 7.92 | 6 |
# /// script
# requires-python = ">=3.12"
# ///
"""Run every generator check in this directory and report them together.
Each check_*.py is its own uv entrypoint with its own PEP 723 dependencies, so
each runs in its own resolved environment. This runner shells out to `uv run`
per script rather than importing them, wh... | portolan-sdi/portolan-spec | examples/tools/tests/run_all.py | .py | aaf13b494263c8a4 | 7.92 | 6 |
"""Thumbnail rendering.
Renders previews in Web Mercator at the data's true aspect ratio over a CARTO
light XYZ tile basemap, painting features from the collection style block so the
preview mirrors the map.
"""
from __future__ import annotations
import json
import math
from pathlib import Path
import duckdb
import ... | portolan-sdi/portolan-spec | examples/tools/thumbnails.py | .py | c1b7803caafafd61 | 7.42 | 6 |
"""XYZ basemap tiles for thumbnails.
Fetches Web Mercator XYZ raster tiles over HTTP, caches them under
`.cache/tiles`, and mosaics the covering tiles into a numpy RGB array cropped
and resampled to a framed Mercator extent. Replaces the GDAL WMS descriptor the
thumbnail path used to hand gdalwarp.
"""
from __future__... | portolan-sdi/portolan-spec | examples/tools/tiles.py | .py | f933e7f184d06db9 | 7.42 | 6 |
"""Validate a built Portolan catalog with rashid, the canonical validator.
rashid defines Portolan conformance. This module is a thin adapter. It runs
rashid's metadata, structural, schema, and data passes over a built catalog,
feeds the schema pass the repo's working-copy schema under stac/, restricts the
data pass t... | portolan-sdi/portolan-spec | examples/tools/validate.py | .py | 4102cf31985f4398 | 7.42 | 6 |
# /// script
# requires-python = ">=3.12"
# dependencies = ["pyyaml>=6"]
# ///
"""Verify requirements.yaml and the spec prose agree, both directions.
The manifest (specs/portolan/requirements.yaml) assigns a stable ID to every
normative statement in the spec. Each entry anchors its ID to the exact
sentence it governs,... | portolan-sdi/portolan-spec | specs/tools/check_requirements.py | .py | 7c29251ec83c642c | 7.92 | 6 |
#!/usr/bin/env python3
"""
Validate a skill or subagent before you open a PR.
Mirrors the repo CI lint (.github/workflows/team-context-lint.yml) AND the
Agent Skills framework frontmatter rules, so failures show up here instead of
on the PR. stdlib only, no dependencies.
Usage:
python3 validate_skill.py <path>
... | Hamosian/marketing-brain-starter | .claude/skills/agent-builder/scripts/validate_skill.py | .py | 08bac99a0c92b1fd | 7.45 | 7 |
#!/usr/bin/env python3
"""Deterministic tier of the skill-routing eval suite.
The repo already lints *structure* (the Team Context Lint workflow) and audits
*staleness* (`/health-check`). Neither one tests *behaviour*: with skills routed purely on
their frontmatter `description`, the failure that actually bites is a n... | Hamosian/marketing-brain-starter | scripts/eval_routing.py | .py | 7fd7f1baaedcee78 | 7.45 | 7 |
"""Provider-failure alerting.
An upstream failure — our Deepgram key revoked, a vendor account out of
credits, a provider outage — must reach a human, not just the logs. When
Sentry is configured, every provider failure becomes an issue fingerprinted
per (provider, code): one broken key groups into ONE alert that emai... | speech-router/speechrouter | gateway/speechrouter_gateway/alerting.py | .py | 95d2e4512fe594fd | 7.52 | 10 |
"""Deepgram-compatible wire mode.
Point an unmodified official Deepgram SDK at this gateway and it works —
against ANY provider, with mid-stream failover. The dialect is selected by
the auth scheme Deepgram SDKs use (`Authorization: Token <key>` header, or
the browser `['token', <key>]` WebSocket subprotocol); native ... | speech-router/speechrouter | gateway/speechrouter_gateway/api/dg_compat.py | .py | 6a46cebfc81340f9 | 7.52 | 10 |
"""Session audio ring buffer.
Single source of audio truth for a streaming session: the client reader
appends, the provider feeder iterates by index. Failover replays by starting
a new iteration at the oldest retained chunk — the buffer keeps the last
`max_seconds` of audio, so a mid-stream provider switch can re-tran... | speech-router/speechrouter | gateway/speechrouter_gateway/audio/ring.py | .py | 1ab3d9f7485a1ed7 | 7.52 | 10 |
"""Optional audio-persistence hook.
Off by default everywhere, including the hosted api.speechrouter.ai — the
gateway's core promise is that audio passes straight through to the provider
and nothing else ever sees it. A sink is how a self-hoster who genuinely
needs a copy (compliance, QA review, dispute resolution) op... | speech-router/speechrouter | gateway/speechrouter_gateway/audio/sink.py | .py | 6c4f06e7e0eb3e25 | 7.52 | 10 |
"""API-key verification. The hot path calls lookup() once per connection."""
import hashlib
from abc import ABC, abstractmethod
from dataclasses import dataclass, field
from ..config import KeyStoreKind, Settings
from ..logging import logger
@dataclass(frozen=True)
class KeyRecord:
key_id: str # stable identif... | speech-router/speechrouter | gateway/speechrouter_gateway/auth/keystore.py | .py | 7308836ac2f5b775 | 7.52 | 10 |
"""Short-lived tokens for client-side use.
API keys must never ship to a browser or mobile app. Instead, the customer's
backend calls POST /v1/tokens with its real key and hands the resulting
`st_...` token to the client. The token authenticates exactly like a key
(same query param / header), inherits the parent key's... | speech-router/speechrouter | gateway/speechrouter_gateway/auth/tokens.py | .py | 6fb6a7a453a36d85 | 7.52 | 10 |
"""Gateway settings. Every self-host/cloud difference is an env var read here."""
from enum import StrEnum
from functools import lru_cache
from pydantic_settings import BaseSettings, SettingsConfigDict
class KeyStoreKind(StrEnum):
none = "none" # dev only: auth disabled, logs a loud warning
local = "local"... | speech-router/speechrouter | gateway/speechrouter_gateway/config.py | .py | a128ed00dd61bdd7 | 7.52 | 10 |
"""Usage events. Fire-and-forget from the hot path; must never add stream latency."""
import time
from abc import ABC, abstractmethod
from dataclasses import asdict, dataclass, field
from ..config import Settings, UsageEmitterKind
from ..logging import logger
@dataclass(frozen=True)
class UsageEvent:
session_id... | speech-router/speechrouter | gateway/speechrouter_gateway/metering/emitter.py | .py | 42458da89150bfdf | 7.52 | 10 |
"""Cloud usage emitter: fire-and-forget XADD onto the usage stream.
The cloud app's Solid Queue consumer reads this stream with a consumer
group (at-least-once) and lands idempotent usage_events + ledger rows.
A metering outage must never touch a live stream, so every failure is
swallowed into a log line.
"""
import ... | speech-router/speechrouter | gateway/speechrouter_gateway/metering/redis_emitter.py | .py | cec3cf836eb59a26 | 7.52 | 10 |
# Derived from Amazon sample code. Copyright Amazon.com, Inc. or affiliates.
# SPDX-License-Identifier: MIT-0
"""AWS event-stream binary framing (prelude + headers + payload + CRC32s).
Wire layout: 4B BE total length | 4B BE headers length | 4B prelude CRC32 |
headers | payload | 4B message CRC32. Header: 1B name-len,... | speech-router/speechrouter | gateway/speechrouter_gateway/providers/aws/eventstream.py | .py | 6c1edbeabc9a5ed5 | 7.52 | 10 |
# Derived from Amazon sample code. Copyright Amazon.com, Inc. or affiliates.
# SPDX-License-Identifier: MIT-0
"""SigV4 presigned URL for the Transcribe streaming WebSocket.
Canonical querystring params MUST be alphabetically ordered — arbitrary
passthrough params would break the signature, which is why the adapter doe... | speech-router/speechrouter | gateway/speechrouter_gateway/providers/aws/signer.py | .py | ac928bb32c4481cc | 7.52 | 10 |
"""Provider plugin contract.
Everything outside providers/ knows only these classes. Every provider quirk —
Deepgram's speech_final vs is_final, Soniox's token algebra, AssemblyAI's turn
supersession, Speechmatics' ack-based backpressure — is absorbed inside an
adapter and comes out as normalized protocol events.
Int... | speech-router/speechrouter | gateway/speechrouter_gateway/providers/base.py | .py | e039be58985d64e1 | 7.52 | 10 |
"""Deepgram streaming STT adapter (raw WebSocket, /v1/listen).
Protocol facts (docs/providers/deepgram.md, verified 2026-07-27):
- Auth header scheme is `Token`, not Bearer.
- Control JSON must go as TEXT frames; binary JSON is treated as audio.
- KeepAlive every 3-5s of send-silence or the server closes 1011/NET-0001... | speech-router/speechrouter | gateway/speechrouter_gateway/providers/deepgram/adapter.py | .py | bad5d9f4c546d868 | 7.52 | 10 |
from __future__ import annotations
import logging
import sys
def get_log_level_func(value_to_log: int):
def func(self, message: str, *args, **kws) -> None:
if self.isEnabledFor(value_to_log):
self._log(value_to_log, message, args, **kws)
return func
# Additional levels inspired by verb... | ionworks/ionworksdata | ionworksdata/logger.py | .py | ec77b48565e73ba7 | 7.54 | 11 |
"""Utility functions for reading cycler data files."""
from __future__ import annotations
from contextlib import contextmanager
from pathlib import Path
import sys
import polars as pl
class _FilterStderr:
"""Filter stderr to suppress pandas dtype warnings while allowing other output."""
def __init__(self)... | ionworks/ionworksdata | ionworksdata/read/_utils.py | .py | 696182fc7aebef43 | 7.54 | 11 |
"""Reader for BaSyTec battery cycler CSV exports.
BaSyTec cyclers (CTS, X50) are commonly used in European academic battery labs.
The CSV format has no preamble — column names on the first line, data rows below.
File format
-----------
Columns: ``run_time`` (HH:MM:SS.sss, hours may exceed 24), ``c_vol`` (V),
``c_cur`... | ionworks/ionworksdata | ionworksdata/read/basytec.py | .py | 9f5f297376098c4e | 7.54 | 11 |
"""BDF (Battery Data Format) reader.
Reads files conforming to the Battery Data Alliance BDF spec
(https://battery-data-alliance.github.io/battery-data-format/) and returns
them in the standard ionworksdata time-series format.
"""
from __future__ import annotations
from pathlib import Path
from typing import Any, Li... | ionworks/ionworksdata | ionworksdata/read/bdf.py | .py | 63b66c644c300eaa | 7.54 | 11 |
from __future__ import annotations
from datetime import datetime
from pathlib import Path
import re
from typing import Any
import iwutil
import polars as pl
import pytz
import ionworksdata as iwdata
from .read import BaseReader
class Biologic(BaseReader):
"""
Reader for Biologic files (.mpt and .txt forma... | ionworks/ionworksdata | ionworksdata/read/biologic.py | .py | 102b8dd89a78bbbe | 7.54 | 11 |
"""Automatic reader detection based on file content."""
from __future__ import annotations
import gzip
from pathlib import Path
import fastexcel
import polars as pl
from ._utils import (
is_maccor_text_extension,
read_excel_and_get_column_names,
suppress_excel_dtype_warnings,
)
# Maccor signature colum... | ionworks/ionworksdata | ionworksdata/read/detect.py | .py | ccf9806081ae798c | 7.54 | 11 |
"""Reader for Gamry EIS data files (.dta and .csv with ZCURVE tables)."""
from __future__ import annotations
from datetime import datetime
from pathlib import Path
from typing import Any, cast
import iwutil # type: ignore[reportMissingTypeStubs]
import polars as pl
import pytz # type: ignore[reportMissingTypeStubs... | ionworks/ionworksdata | ionworksdata/read/gamry.py | .py | 3eac1e41f6daf33c | 7.54 | 11 |
from __future__ import annotations
from datetime import datetime
from io import BytesIO, StringIO
from pathlib import Path
import re
from typing import Any
import fastexcel
import iwutil
import polars as pl
import ionworksdata as iwdata
from .read import BaseReader
class Neware(BaseReader):
name: str = "Newar... | ionworks/ionworksdata | ionworksdata/read/neware.py | .py | f1a70510291eac8d | 7.54 | 11 |
# pyright: reportMissingTypeStubs=false
from datetime import datetime
from pathlib import Path
from typing import Any, cast
import iwutil # type: ignore[reportMissingTypeStubs]
import polars as pl
import pytz # type: ignore[reportMissingTypeStubs]
import ionworksdata as iwdata
from .read import BaseReader
class ... | ionworks/ionworksdata | ionworksdata/read/novonix.py | .py | 681bbd0e93fef2ed | 7.54 | 11 |
from __future__ import annotations
from pathlib import Path
from typing import Any
import warnings
import iwutil
import polars as pl
from .csv import (
build_columns_keep,
detect_canonical,
synthesize_current_a_from_ma,
)
from .read import BaseReader
class Parquet(BaseReader):
name: str = "parquet"... | ionworks/ionworksdata | ionworksdata/read/parquet.py | .py | d76689c380ac5382 | 7.54 | 11 |
from __future__ import annotations
import csv as csv_py
from datetime import datetime
from pathlib import Path
from typing import Any
import iwutil
import polars as pl
import pytz
import ionworksdata as iwdata
from .read import BaseReader
def _try_int_or_nan(x: str) -> int | None:
try:
return int(x)
... | ionworks/ionworksdata | ionworksdata/read/repower.py | .py | 60fc2f98cd5a1e1f | 7.54 | 11 |
"""
Settings module for ionworksdata.
This module provides configurable settings for various tolerance parameters
used throughout the ionworksdata package. Users can modify these settings
to adjust the behavior of algorithms and analysis functions.
"""
from __future__ import annotations
from typing import Any
clas... | ionworks/ionworksdata | ionworksdata/settings.py | .py | e08ba3e4a62f21e8 | 7.54 | 11 |
from __future__ import annotations
from datetime import UTC, datetime, timedelta
import warnings
import numpy as np
import polars as pl
def get_current_and_capacity_units(options: dict | None) -> tuple[str, str]:
options = options or {}
current_format = options.get("current units", "total")
if current_f... | ionworks/ionworksdata | ionworksdata/util.py | .py | b909656eab5eca16 | 7.54 | 11 |
#!/usr/bin/env python
"""
Test script to demonstrate and verify the conversion from old to new format.
Creates sample data in old format, converts it, and verifies the results.
"""
from pathlib import Path
import sys
import polars as pl
# Add parent to path to import conversion script
sys.path.insert(0, str(Path(__... | ionworks/ionworksdata | scripts/test_conversion.py | .py | 9f82ca8e93076653 | 8.04 | 11 |
import json
import os
import time
import threading
from datetime import datetime, timezone
from config import Config
MODELS_CONFIG = []
models_env = Config.GEMINI_MODELS
# Support multiline format with newlines or single-line with commas
raw_lines = models_env.replace(',', '\n').split('\n')
for line in raw_lines:
... | faithsaly5-stack/GhostGram | api_tracker.py | .py | 1fb0cf2ccd26ac77 | 7.57 | 13 |
import os
import json
import asyncio
import random
from config import Config
class AssistantManager:
def __init__(self, state_file=Config.ASSISTANT_STATE_FILE):
self.state_file = state_file
self.dm_enabled = False # By default, Assistant mode is OFF
self.active_chats = set() # Speci... | faithsaly5-stack/GhostGram | assistant_manager.py | .py | a15f3e44ff714990 | 7.57 | 13 |
import os
import re
import html
import time
import asyncio
import threading
from google import genai
from google.genai import types
from config import Config
from text import Text
from api_tracker import api_tracker
from text_processing import clean_outbound_text
class GeminiEngine:
def __init__(self):
sel... | faithsaly5-stack/GhostGram | gemini_engine.py | .py | 8b521e144221ba70 | 7.57 | 13 |
import os
import json
import asyncio
from datetime import datetime, timezone
from config import Config
from text import Text
class MemoryManager:
def __init__(self, state_file=Config.MEMORY_STATE_FILE):
self.state_file = state_file
self.reset_cutoffs = {} # chat_id -> timestamp (float)
... | faithsaly5-stack/GhostGram | memory_manager.py | .py | bb3b783c12b9802f | 7.57 | 13 |
import os
import json
import asyncio
import random
from config import Config
class PalManager:
def __init__(self, state_file=Config.PAL_STATE_FILE):
self.state_file = state_file
self.active_chats = {} # dict: chat_id -> mode ("normal" or "lust")
self.auto_engage_chats = {} # dict: chat_id -... | faithsaly5-stack/GhostGram | pal_manager.py | .py | 15c6f48a410fcc59 | 7.57 | 13 |
import os
import glob
from config import Config
class PersonaManager:
def __init__(self, dir_path="personas"):
self.dir_path = dir_path
self.personas = {}
self.load_personas()
def load_personas(self):
"""Loads personas from the .txt files in the personas directory."""
i... | faithsaly5-stack/GhostGram | persona_manager.py | .py | 509f01cac9f18c59 | 7.57 | 13 |
import asyncio
import random
from config import Config
def calculate_human_typing_delay(text: str) -> float:
"""
Calculates a human-like, proportional typing duration based on message length,
punctuation pauses, and natural variance.
"""
if not text:
return 1.2
text = text.strip()
... | faithsaly5-stack/GhostGram | typing_helper.py | .py | 3e8a7a91f67d6ad5 | 7.57 | 13 |
#!/usr/bin/env python3
"""Fail if the shared ruff/pyright config has drifted between this repo's Python projects.
The engine at the root and the validator beside it carry the same lint and type-check
block, copied verbatim, because neither ruff's nor pyright's pyproject config can be inherited from
a file outside the ... | decoderesearch/interp-engine | .github/scripts/check_lint_config_parity.py | .py | 30e84aa1be83fdb8 | 7.54 | 11 |
"""What a directory of JSON cells says, shared by everything that renders them.
``report_bench`` renders these into ``results-latest.md``; ``publish`` renders the same readings into
the root README's throughput tables and the visualizer's card. The three views must agree about which
cell is which, about row order, and... | decoderesearch/interp-engine | benchmarks/cells.py | .py | 0ef340bcc4c39394 | 7.54 | 11 |
"""The environment stamp and the timing primitives.
Split out from the workloads because both need care that is unrelated to what is being timed.
"""
from __future__ import annotations
import os
import platform
import subprocess
import time
from dataclasses import dataclass, field
import torch
GIB = float(1 << 30)... | decoderesearch/interp-engine | benchmarks/probe.py | .py | 3c7a1fa0d54f11e0 | 7.54 | 11 |
"""Drive the async model surface from synchronous code.
:class:`LoopRunner` owns one event loop on one daemon thread and submits coroutines to it,
which is what lets the sync free functions (``run_with_cache``, ``steer``, ``generate_stream``)
serve a backend whose only surface is ``async``.
A long-lived loop rather t... | decoderesearch/interp-engine | interp_engine/_loop.py | .py | b35dcd8e4f6c8c04 | 7.54 | 11 |
"""The canonical capture address, and the one string form it round-trips through.
An address says *which tensor*, in enough coordinates to name it unambiguously. It replaces
``Point = tuple[str, int]``, which conflated the tensor with the invocation and could not be extended
without every consumer silently truncating ... | decoderesearch/interp-engine | interp_engine/address.py | .py | 9328e3bde87136af | 7.54 | 11 |
"""Which config fields the off-kernel attention recompute honors -- and a tripwire for the rest.
Everywhere the engine calls a real module, architecture quirks are free: ``transformers``
applies them inside ``forward()`` and we never have to know they exist. The exception is the
vLLM backend's attention path, where th... | decoderesearch/interp-engine | interp_engine/attn_config.py | .py | 50e21a1614b8229b | 7.54 | 11 |
"""Pre-softmax attention scores (TransformerLens' ``blocks.N.attn.hook_attn_scores``).
The scores are the one attention quantity with no module boundary anywhere: ``transformers`` forms
them inside a plain function, softmaxes them, and returns only the probabilities. HF's own
``output_attentions`` is a forward hook on... | decoderesearch/interp-engine | interp_engine/attn_scores.py | .py | 17bb2a9136607404 | 7.54 | 11 |
"""Whether gradients are available, per backend and (on vLLM) per layer.
Two rules this module exists to enforce.
**Gradient support never gates loading.** Someone moving off vLLM loads successfully on any
kernel, any quantization scheme, any cudagraph mode, and finds out about gradients only if they
ask for them. So... | decoderesearch/interp-engine | interp_engine/autograd_support.py | .py | 65e935cded1c544b | 7.54 | 11 |
"""Turn a generated completion back into chat messages, without re-parsing the prompt.
A chat response is ``prompt messages + what the model just generated``. The prompt half never
needs parsing: whoever rendered the prompt still holds the structured messages it came from.
Only the generation has to be recovered, and ... | decoderesearch/interp-engine | interp_engine/chat_compose.py | .py | 40a0de03af49650f | 7.54 | 11 |
"""Startup check for the CUDA driver / PyTorch build pair.
A driver older than the CUDA version torch was built against fails inside
``torch.cuda._lazy_init``, ten frames below anything in this repo, on whichever call
happens to touch the GPU first. The message it prints ("found version 12080") names
neither the torch... | decoderesearch/interp-engine | interp_engine/cuda_preflight.py | .py | 56c90c7831a2d8eb | 7.54 | 11 |
"""Logit + Jacobian-lens read-out by calling the model's real final norm + lm_head.
Guiding rule: **call the real HF module** (``final_norm``, ``lm_head``) rather than
reconstruct the math, so RMSNorm offset / weight tying / dtype are all handled for free.
Only the Gemma-style final-logit softcap is applied explicitly... | decoderesearch/interp-engine | interp_engine/lens.py | .py | e05ec3d0f26db1e2 | 7.54 | 11 |
"""``load_model``: the single documented entry point for getting a model.
Picks a backend, constructs it, and hands back something you can capture from, steer, and
generate with. Callers who want a specific backend can still construct ``EagerModel`` or
``VLLMModel`` directly -- this only removes the need to *decide*.
... | decoderesearch/interp-engine | interp_engine/load.py | .py | 62508fea3f800388 | 7.54 | 11 |
"""Rebuilding the routing decision where no module boundary carries it.
The MoE routing points are read off the router module wherever one runs, and that is still the rule --
see :mod:`interp_engine.points`. This module is the exception it makes room for: transformers' MXFP4
path for gpt-oss replaces the sparse block'... | decoderesearch/interp-engine | interp_engine/moe_routing.py | .py | 72e7fa074800edbf | 7.54 | 11 |
"""Give a notebook kernel's stdout the file descriptor vLLM's engine start needs.
vLLM silences C-level output around ``torch.distributed.new_group`` by dup'ing over a
descriptor (``suppress_stdout`` in ``vllm/utils/system_utils.py``), and its EngineCore
child is forked, so the child inherits whichever ``sys.stdout`` ... | decoderesearch/interp-engine | interp_engine/notebook_stdout.py | .py | 7cb0d1fdbd5f302c | 7.54 | 11 |
"""Backend-agnostic steering specs (replaces chatspace/steerllm's core.specs).
Mirrors the small spec surface the inference endpoints build (AddSpec /
ProjectionCapSpec / LayerSteeringSpec / SteeringSpec) so they can import from the
engine instead of the vendored steerllm, and provides a converter to the flat
worker-s... | decoderesearch/interp-engine | interp_engine/steer_specs.py | .py | 8368ac9da43abc5c | 8.04 | 11 |
"""Building the PyTorch forward hooks that write into a capture store.
The plain, request-agnostic factories, shared by the single-request path in
:mod:`~interp_engine.vllm_capture.capture` and the attention capture in
:mod:`~interp_engine.vllm_capture.attn`. The per-request demux builds its own combined
hooks (steeri... | decoderesearch/interp-engine | interp_engine/vllm_capture/_hooks.py | .py | 81660f6f332909ca | 7.54 | 11 |
"""Single-request capture: global hooks, one forward at a time.
The simple path, and the shape the tier-1 ``worker_extension_cls`` plugin exposes to users
driving their own ``vllm.LLM``; nothing inside the engine drives it. :class:`VLLMModel` uses
the per-request demux in :mod:`~interp_engine.vllm_capture.requests` in... | decoderesearch/interp-engine | interp_engine/vllm_capture/capture.py | .py | b3c7d099bfa4cf86 | 7.54 | 11 |
"""Which CUDA-graph path vLLM chose, for the two decisions that depend on the answer.
The rest of this package assumes ``enforce_eager=True``, because a replayed CUDA graph does not
re-execute the Python ``forward`` a ``register_forward_hook`` lives on. vLLM 0.26 complicates that
assumption without lifting it, in a wa... | decoderesearch/interp-engine | interp_engine/vllm_capture/graphs.py | .py | 5e21920e399520b4 | 7.54 | 11 |
"""
Sandbox Manager for Hosted Agent Infrastructure.
Use when: building background coding agents that need sandboxed execution
environments with pre-built images, warm pools, and session snapshots.
This module provides composable building blocks for sandbox lifecycle
management. Each class handles one concern (image ... | docxology/template | .agents/skills/hosted-agents/scripts/sandbox_manager.py | .py | 843b07af22f7ce53 | 7.65 | 19 |
"""Load persisted harness run state from a workspace directory."""
from __future__ import annotations
import json
from pathlib import Path
def load_benchmark(workspace: Path) -> dict:
"""Read benchmark.json from a harness workspace."""
benchmark_path = workspace / "benchmark.json"
if not benchmark_path.... | docxology/template | docs/prompts/_skill-eval/scripts/skill_eval/workspace.py | .py | 504dc47b921b96ea | 7.65 | 19 |
"""Infrastructure layer - Modular build, validation, and development tools.
This package contains reusable infrastructure modules for building, validating, and
managing research projects. Organized by functionality into submodules.
Modules:
autoresearch: Deterministic research planning/readiness controls; see aut... | docxology/template | infrastructure/__init__.py | .py | dae93f8b71bebe46 | 7.65 | 19 |
"""Metric-unit inference and grading helpers for autoresearch benchmarks."""
from __future__ import annotations
import math
import re
from collections.abc import Sequence
from statistics import median
_METRIC_LINE_RE = re.compile(
r"^METRIC\s+(?P<name>[A-Za-z_][A-Za-z0-9_.:-]*)=(?P<value>[+-]?(?:\d+(?:\.\d*)?|\.... | docxology/template | infrastructure/autoresearch/metrics.py | .py | 4326517f3547a863 | 7.65 | 19 |
"""Public dataclasses for deterministic AutoResearch readiness checks."""
from __future__ import annotations
from dataclasses import asdict, dataclass
from pathlib import Path
from typing import Any
DEFAULT_QUALITY_CHECKS = (
"domain_profile",
"experiment_plan",
"pipeline_contracts",
"evidence_regis... | docxology/template | infrastructure/autoresearch/models.py | .py | 478fa28da94b9998 | 7.65 | 19 |
"""Deterministic AutoResearch multi-phase orchestration engine.
Provides structured execution across AutoResearch phases:
1. Intrinsic phase validation (domain, plan, pipeline, scripts)
2. Candidate budget evaluation (readiness-only; no candidate execution)
3. Extrinsic readiness verification (evidence, manifests, rev... | docxology/template | infrastructure/autoresearch/orchestrator.py | .py | a800b0dad4d5e632 | 7.65 | 19 |
"""Reusable rubric scoring for template benchmark checks."""
from __future__ import annotations
import math
from dataclasses import dataclass, field
from typing import Any, Mapping
@dataclass(frozen=True)
class RubricDimension:
"""One weighted benchmark dimension."""
name: str
weight: float = 1.0
@da... | docxology/template | infrastructure/benchmark/rubrics.py | .py | 11ac781f8caa6ba9 | 7.65 | 19 |
"""Lightweight compatibility exports for core infrastructure utilities.
New code should import leaf modules directly. Package-level conveniences are
resolved lazily so importing an unrelated leaf such as ``pipeline.types`` does
not initialize performance or scientific dependencies.
"""
from __future__ import annotat... | docxology/template | infrastructure/core/__init__.py | .py | 507a031677d13019 | 7.65 | 19 |
"""Independent POSIX guardian for token-bound subprocess cleanup.
The bounded executor normally waits for a direct child and then removes any
detached descendants that inherited the run token. A heavily loaded caller can
be descheduled after the direct child exits, however, which leaves a detached
writer time to act ... | docxology/template | infrastructure/core/_bounded_run_guardian.py | .py | 3d71ef56f4966cec | 7.65 | 19 |
from deskit.base.base import BaseRouter
from deskit.base.predictbase import PredictBase
import numpy as np
class KNNBase(PredictBase, BaseRouter):
"""
Base for KNN-based DES algorithms.
Inheriting PredictBase gives every subclass the public
predict() and predict_weights() API automatically.
Subcl... | TikaaVo/deskit | src/deskit/base/knnbase.py | .py | 047f922fa088c1ab | 7.48 | 8 |
"""
DEWS-I: K-Nearest Neighbors with Distance-Weighted Softmax — Inverse-weighted.
"""
from deskit.base.knnbase import KNNBase
from deskit._config import make_finder, resolve_metric, resolve_norm, prep_fit_inputs
import numpy as np
class DEWSI(KNNBase):
"""
DEWS-I: K-Nearest Neighbors with Distance-Weighted S... | TikaaVo/deskit | src/deskit/des/dewsi.py | .py | 690d286068041dc4 | 7.48 | 8 |
"""
DEWS-IV: Distance-weighted Ensemble with Softmax — Inverse-distance + Variance-penalised.
"""
from deskit.base.knnbase import KNNBase
from deskit._config import make_finder, resolve_metric, resolve_norm, prep_fit_inputs
import numpy as np
_SIGNED_METRICS = {'mae', 'mse'}
def _signed_residual(y_true, y_pred):
... | TikaaVo/deskit | src/deskit/des/dewsiv.py | .py | 92aac462e214afef | 7.48 | 8 |
"""
DEWS-U: K-Nearest Neighbors with Distance-Weighted Softmax.
"""
from deskit.base.knnbase import KNNBase
from deskit._config import make_finder, resolve_metric, resolve_norm, prep_fit_inputs
import numpy as np
class DEWSU(KNNBase):
"""
DEWS-U: K-Nearest Neighbors with Distance-Weighted Softmax.
Parame... | TikaaVo/deskit | src/deskit/des/dewsu.py | .py | cf047a709818f8ac | 7.48 | 8 |
"""
DEWS-V: Distance-weighted Ensemble with Softmax — Variance-penalised.
"""
from deskit.base.knnbase import KNNBase
from deskit._config import make_finder, resolve_metric, resolve_norm, prep_fit_inputs
import numpy as np
_SIGNED_METRICS = {'mae', 'mse'}
def _signed_residual(y_true, y_pred):
return float(y_tru... | TikaaVo/deskit | src/deskit/des/dewsv.py | .py | 09d4a91114551106 | 7.48 | 8 |
"""
KNORA-U: K-Nearest Oracles — Union.
"""
from deskit.base.knnbase import KNNBase
from deskit._config import make_finder, resolve_metric, resolve_norm, prep_fit_inputs
import numpy as np
class KNORAU(KNNBase):
"""
KNORA-U: K-Nearest Oracles — Union.
Parameters
----------
task : str
'cla... | TikaaVo/deskit | src/deskit/des/knorau.py | .py | 6a0465a8756c8404 | 7.48 | 8 |
"""
OLA: Overall Local Accuracy.
"""
from deskit.base.knnbase import KNNBase
from deskit._config import make_finder, resolve_metric, prep_fit_inputs
import numpy as np
class OLA(KNNBase):
"""
OLA: Overall Local Accuracy.
Parameters
----------
task : str
'classification' or 'regression'.
... | TikaaVo/deskit | src/deskit/des/ola.py | .py | 0de759163c92cf2f | 7.48 | 8 |
"""
Normalization functions for Dynamic Ensemble Selection.
All functions operate row-wise: each row corresponds to a query instance,
and columns are the base models. They return a matrix of the same shape,
with values in a suitable range (usually [0,1]) and "higher = better".
Built‑in options:
'minmax' : class... | TikaaVo/deskit | src/deskit/norms.py | .py | fef1749bbbf1ad97 | 7.48 | 8 |
"""
DynamicRouter — string-based factory for programmatic algorithm selection.
Use DynamicRouter when you need to choose an algorithm via a string at runtime.
"""
from deskit.des.dewsu import DEWSU
from deskit.des.ola import OLA
from deskit.des.knorau import KNORAU
from deskit.des.knorae import KNORAE
from ... | TikaaVo/deskit | src/deskit/router.py | .py | d50b48d02c115991 | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
from astropy.wcs import WCS
from astropy.coordinates import Angle, SkyCoord
import numpy as np
from pathlib import Path
from azulero import retrieve, pr... | kabasset/azulero | src/azulero/api.py | .py | 2d2dae9bfdc64012 | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
from astropy.io import fits
from astropy.wcs import WCS
import cv2
import json
import numpy as np
from pathlib import Path
import tifffile
import yaml
f... | kabasset/azulero | src/azulero/image/io.py | .py | 7a687450caa831df | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
import enum
import numpy as np
from skimage.restoration import inpaint as skinpaint
from skimage.segmentation import clear_border as skclear_border
from ... | kabasset/azulero | src/azulero/image/mask.py | .py | 5919ae8f87dc154a | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
import numpy as np
import cv2
from scipy.spatial.transform import Rotation
class Projection:
"""
Equirectangular to planar projection, adapted ... | kabasset/azulero | src/azulero/projections/equirectangular.py | .py | ab3f1c14e935aa2c | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
import numpy as np
import cv2
from scipy.spatial.transform import Rotation
from astropy.coordinates import SkyCoord, Angle
from astropy.wcs import WCS
f... | kabasset/azulero | src/azulero/projections/wcs.py | .py | 083e5eca99511960 | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
from pathlib import Path
from astropy.coordinates import Angle, SkyCoord
from astropy.io import fits
from astropy.nddata import Cutout2D
from astropy.wcs... | kabasset/azulero | src/azulero/providers/cutout.py | .py | 876caad9de32a280 | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
from astropy.coordinates import SkyCoord
import csv
import gzip
from io import BytesIO, StringIO
from pathlib import Path
import requests
from azulero.p... | kabasset/azulero | src/azulero/providers/dss.py | .py | 5c3915333ad24f70 | 7.48 | 8 |
# SPDX-FileCopyrightText: Copyright (C) 2025-2026, Antoine Basset
# SPDX-PackageSourceInfo: https://github.com/kabasset/azulero
# SPDX-License-Identifier: Apache-2.0
from astropy.io import fits
from astropy.coordinates import Angle, SkyCoord
from pathlib import Path
from typing import Callable, Iterable
from azulero... | kabasset/azulero | src/azulero/providers/factory.py | .py | 6f440c2cdcb34e74 | 7.48 | 8 |
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