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def ridgeTest(xArr, yArr): """ Desc: 函数 ridgeTest() 用于在一组λ上测试结果 Args: xArr:样本数据的特征,即 feature yArr:样本数据的类别标签,即真实数据 Returns: wMat:将所有的回归系数输出到一个矩阵并返回 """ xMat = np.mat(xArr) yMat = np.mat(yArr).T # 计算Y的均值 yMean = np.mean(yMat, 0) yMat = yMat - yMe...
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def gumbel_softmax(logits, temperature, hard=True): """Sample from the Gumbel-Softmax distribution and optionally discretize. Args: logits: [batch_size, n_class] unnormalized log-probs temperature: non-negative scalar hard: if True, take argmax, but differentiate w.r.t. soft sample y Returns: [bat...
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def create_Walternating_layered_ansatz(qc: qiskit.QuantumCircuit, thetas: np.ndarray, num_layers: int = 1): """Create Walternating layered ansatz Args: - qc (qiskit.QuantumCircuit): init circuit - thetas (np.ndarray): par...
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def screen(corners, h=0.1): """ Creates a screen. Parameters ---------- corners : np.ndarray A (4 x 3) array that defines four corners of the screen. h : float A floating point number specifying the grid size. Output ------- grid : bempp.Grid A structured gr...
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def execute(sql, con, cur=None, params=None, flavor='sqlite'): """ Execute the given SQL query using the provided connection object. Parameters ---------- sql : string Query to be executed con : SQLAlchemy engine or DBAPI2 connection (legacy mode) Using SQLAlchemy makes it possi...
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def lower(s: "Stream[str]") -> "Stream[str]": """Computes the lowercase of a string stream. Parameters ---------- s : `Stream[str]` A string stream. Returns ------- `Stream[str]` A lowercase string stream. """ return s.apply(lambda x: x.lower()).astype("string")
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def mean_feature(data, rolling_window, num): """Computes the mean for a given lag and its rolling window Given a set number of lags in the past, a set rolling window and the input dataset, computes the rolling average mean for the given window. Parameters ---------- data: pd.Dataframe ...
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def cmgListToWaterArray(stacks:list,product="MOD09CMG") -> "numpy array": """ This function takes a list of CMG .hdf files, and returns a binary array, with "0" for non-water pixels and "1" for water pixels. If any file flags water in a pixel, its value is stored as "1" *** Parameters ---------- stacks:list ...
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def decode(packed_list): """ implement the function packed the string """ # Empty list of tuple decode_str = "" list_len = len(packed_list) for i in range(list_len): # element of packed list str_tuple_count = packed_list[i] # find number of counting from tuple ...
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def travel_space_separated(curr): """Print space separated linked list elements.""" if curr is None: return "" print(curr.data, end=' ') travel_space_separated(curr._next)
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import urllib import re import os def get_PDF_content(query_string, link): """ Gets all of the text from a PDF document Parameters ---------- query_string : string the query that generated the PDF document link : string the URL for the document Returns ------- ...
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def _generate_subparser(parser, name, description=None, subcommand=False): """Helper function to return a subparser with the given options""" subparser = parser.add_parser( name, description=description, formatter_class=RawDescriptionHelpFormatter ) if subcommand: subpar...
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def identity_matrix(dim): """Construct an identity matrix. Parameters ---------- dim : int The number of rows and/or columns of the matrix. Returns ------- list of list A list of `dim` lists, with each list containing `dim` elements. The items on the "diagonal" are ...
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def get_zscale(self): """Get the qcodes_colorbar scaling :return: str "linear" or "log" :raises: AttributeError """ if not hasattr(self, 'qcodes_colorbar'): raise AttributeError("Axes object does not have a colorbar.") if isinstance(self.qcodes_colorbar.formatter, ticker.LogFormatter):...
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def train_logistic_regression(X_train, y_train, X_val, y_val, min_coef=1, max_iter=2000): """ Logistic regression training algorithm on binary features :param X_train: Pandas DataFrame of train set features :param y_train: Pandas Series of train set binary target :param X_val: Pandas DataFrame of v...
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def result2list(foo): """Convert from ParseResults to normal list.""" if isinstance(foo, ParseResults): return [result2list(bar) for bar in foo] else: return foo
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def cluster_shutdown(cluster): """ Shutdown an entire cluster, cancelling any spot requests and terminating all instances in the cluster. Also permanently deletes any record of the cluster. RouteParams: cluster: the name of a cluster Returns: A status code indicating success ...
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def collect_jsonschema_errors(metadata, convention, bq_json=None): """Evaluate metadata input against metadata convention using JSON schema returns False if input convention is invalid JSON schema """ # this function seems overloaded with its three tasks # schema validation, non-ontology errors, ont...
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def kg2m3H2O_hot(kg): """kg -> m^3 (50 C hot water)""" return kg/988.1
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def print_debug(name, *args, **kwargs): """Printing Debug Function to display formatted output in decorator options Args: name: Name of Process [like "Function Source:"] *args: Variable length argument list. **kwargs: Arbitrary keyword arguments. Returns: called print fu...
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from typing import List def feeder(url: str, archived: bool, archived_only: bool, verbose: bool) -> List[str]: """Create and return a list of urls according to the input.""" thread_urls = [] # list of thread urls if url.endswith(".txt"): with open(url, "r") as f: thread_urls.extend...
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from typing import OrderedDict import re def convert_torch_resnet_weights_to_serialClassificationNet(model, state_dict, strict=True): """Convert resnet weights from torchvision to vega weights name.""" names = convert_names(model) new_state_dict = OrderedDict() for name in names: state_name = ...
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import sys from textwrap import dedent import re import hashlib def main(argv): """ Main program """ if len(argv) < 2: print("Usage: {0} <input.cl>... <output.cpp>".format(sys.argv[0]), file = sys.stderr) return 2 with open(sys.argv[-1], 'w') as outf: print...
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import yaml def load_yaml(file_path): """Load a yaml file into a dictionary""" try: with open(file_path, 'r') as file: return yaml.safe_load(file) except EnvironmentError: # parent of IOError, OSError *and* WindowsError where available return None
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from typing import Set def build_column(min_trays, max_trays, xD, xB): """Builds the column model.""" m = ConcreteModel('benzene-toluene column') m.comps = Set(initialize=['benzene', 'toluene']) min_T, max_T = 300, 400 max_flow = 500 m.T_feed = Var( doc='Feed temperature [K]', domain=N...
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def coerce(fun): """Decorates a function and coerces each of the inputs of the function into a Forward object. Many of our functions would like to operate on Forward objects instead of raw values. For example, __add__ might get an integer in the case of Forward('x', 5) + 2, but we want the 2 to be ...
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def DatasetWithIndices(cls): """ Modifies the given Dataset class to return a tuple data, target, index instead of just data, target. """ def __getitem__(self, index): data, target = cls.__getitem__(self, index) return data, target, index return type(cls.__name__, (cls,), { ...
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def hex_int_range(min=None, max=None, min_included=True, max_included=True): """Validate that the config option is an integer in the given range.""" return All( hex_int, Range(min=min, max=max, min_included=min_included, max_included=max_included), )
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import requests def execute_graphql_request(payload): """Execute queries and mutations on the GraphQL API.""" url = 'http://graphql:5433/graphql' # Should be moved to config file headers = {'Content-Type': 'application/graphql'} response = requests.post(url, headers=headers, data=payload) status ...
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def s3_put(bucket_name, file_path, file_name, payload): """ Use for Uploading a file as StringIO object :param str bucket_name: s3 bucket name :param str file_path: string name, sub folders are allowed :param str file_name: name that you need to be in destination S3 Bucket location :param String...
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def add_contrastive_loss(hidden, hidden_norm=True, temperature=1.0, tpu_context=None, weights=1.0): """Compute the instance discrimination loss for the model. Args: hidden: hidden vector (`Tensor`) of shape (bsz...
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import time def timed_call(f, args): """Call function f with arguments args and time its run time. Args: f: The function to call args: The arguments to pass to f Returns: Return the result of the function call and how much time it takes as tuple e.g. (result, time). """ s...
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def count_words(texts): """ Counts the words in the given texts, ignoring puncuation and the like. @param texts - Texts (as a single string or list of strings) @return Word count of texts """ if type(texts) is list: return sum(len(t.split()) for t in texts) return len(texts.split())
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def train_circuit(circuit,n_params,n_cnots,X_train,Y_train,X_test,Y_test,optim,optimoptions,inference='wall_clock',rate_type='accuracy',**kwargs): """Develop and train your very own variational quantum classifier. Use the provided training data to train your classifier. The code you write for this challeng...
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def calvin_astgen(source_text, app_name, verify=True): """ Generate AST from script, return processed AST and issuetracker. Parameter app_name is required to provide a namespace for the application. Optional parameter verify is deprecated, defaults to True. """ cg, issuetracker = _calvin_cg(sou...
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import os import stat import mimetypes def file_response(request, filepath, block=None, status_code=None, content_type=None, encoding=None, cache_control=None): """Utility for serving a local file Typical usage:: from pulsar.apps import wsgi class MyRouter(wsgi.Router): ...
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def fit(*views): """ Convenience method to both enable and apply natural fit width and height constraints with one call. Useful mainly for Buttons and Labels. You can provide several views, first view is returned. """ for view in views: enable(view) view.dock.fit() return views[0]
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def get_subnetwork(project_id, context): """ Gets a subnetwork name. """ subnet_name = context.properties.get('subnetwork') is_self_link = '/' in subnet_name or '.' in subnet_name if is_self_link: subnet_url = subnet_name else: subnet_url = 'projects/{}/regions/{}/subnetworks/{}' ...
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def TC_NTU(T1,T2,T3,T4,NTU): """ Outlet temperature of the cold side of the heat exchanger with given number of transfer units (for a counterflow heat exchanger only) """ C = (T1 - T2) / (T4 - T3) if C<1: E = (1 - exp((C - 1) * NTU)) / (1 - C*exp((C - 1) * NTU)) Ecold = E...
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def quadraticEval(a, b, c, x): """given all params return the result of quadratic equation a*x^2 + b*x + c""" return a*(x**2) + b*x + c
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def file_format_from_suffix(file_suffix: str) -> FileFormat: """Returns the file format associated with the file extension (`tfrecord`).""" if file_suffix not in _FILE_SUFFIX_TO_FORMAT: raise ValueError('Unrecognized file extension: Should be one of ' f'{list(_FILE_SUFFIX_TO_FORMAT.values()...
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def upgrade_tarball_install(config, new_tarball, preserve_old_install): """Performs an upgrade for an existing Scalyr Agent 2 that was previously installed using the tarball method. @param config: The configuration for this agent. @param new_tarball: The path to file containing the new tarball to install. ...
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from typing import List def grab_std_includes(headers: List[str], sources: List[str]) -> List[str]: """Grab all std includes from headers and sources""" total_std_includes: List[str] = [] for header in headers + sources: with open(header) as file: lines = file.readlines() ...
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def get_testcase_params(): """ Returns the list of testcase parameters from the configuration file :return: dict """ testcase_parameters = dict() parameters = CONF_FILE.get_variable_list(cf.CFS_TESTCASE_PARAMETERS) for param in parameters: testcase_parameters[param] = CONF_FILE.get_...
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def job_get_script_list(request, biz_cc_id): """ 查询业务脚本列表 :param request: :param biz_cc_id: :return: """ # 查询脚本列表 client = get_client_by_request(request) script_type = request.GET.get('type') kwargs = { 'bk_biz_id': biz_cc_id, 'is_public': True if script_type == '...
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def stringdb_escape_text(text): """Escape text for database_documents.tsv format.""" return text.replace('\\', '\\\\').replace('\t', '\\t')
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import logging import tempfile def process_impact_task(source_id, message): """Process an impact task.""" logging.info('Processing impact task for %s', source_id) regress_result = ndb.Key(osv.RegressResult, source_id).get() if not regress_result: logging.error('Missing RegressResult for %s', source_id) ...
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import argparse def parse_args(): """ Parse command arguments. """ parser = argparse.ArgumentParser(description='validate data from starbust algo I for test (ex. chessboard test)') parser.add_argument('path', help='path to starburst filtered file') return parser.parse_args()
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import sys import traceback def get_spyderplugins_mods(prefix, extension): """Import modules that match *prefix* and *extension* from `spyderplugins` package and return the list""" modlist = [] for modname in get_spyderplugins(prefix, extension): name = 'spyderplugins.%s' % modname try...
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import torch def in_parallel(model, device_ids): """ Wraps a model in a DataParallel module such that it supports an input dictionary for multiple inputs rather than kwargs. """ return RemoveStatePrefix(DictToKwargs(torch.nn.DataParallel( KwargsToDict(model), device_ids)), 'module.modu...
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def mean_ap(dist_mat, query_ids, gallery_ids, query_cams, gallery_cams): """Compute mean average precision (mAP)""" dist_mat = dist_mat.cpu().numpy() m, n = dist_mat.shape query_ids = np.asarray(query_ids) gallery_ids = np.asarray(gallery_ids) query_cams = np.asarray(query_cams) gallery_cams...
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def check_account_age(key): """ Searches DynamoDB for stored user_id or account_id string stored by indicator creation rules for new user / account creation """ if isinstance(key, str) and key != "": return bool(get_string_set(key)) return False
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def _is_cluster_volume(cluster_id, ebs_volume): """ Helper function to check if given volume belongs to given cluster. :param UUID cluster_id: UUID of Flocker cluster to check for membership. :param boto.ec2.volume ebs_volume: EBS volume to check for input cluster membership. :...
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def serialize_sqla(data): """Serialiation function to serialize any dicts or lists containing sqlalchemy objects. This is needed for conversion to JSON format.""" # If has to_dict this is asumed working and it is used. if hasattr(data, 'to_dict'): return data.to_dict() if hasattr(data, '__d...
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def friends(graph, user): """Returns a set of the friends of the given user, in the given graph""" return set(graph.neighbors(user))
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import xml def _ValueOrPlaceHolder(value_string, description): """Embeds a string inside an XML <value>...</value> element. If the string is empty or None, an alternate string is used instead. Args: value_string: String to embed description: String to be used if the value string is empty or None. R...
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from typing import List from typing import Tuple from typing import Callable def get_input_labels( io_gratings: List[ComponentReference], ordered_ports: List[Port], component_name: str, layer_label: Tuple[int, int] = (10, 0), gc_port_name: str = "o1", port_index: int = 1, get_input_label_t...
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def process_NNC(chrom, positions, strand, edge_IDs, vertex_IDs, transcript_dict, gene_starts, gene_ends, edge_dict, locations, vertex_2_gene, run_info): """ Novel not in catalog case """ novelty = [] start_end_info = {} gene_ID = find_gene_match_on_vertex_basis(vertex_IDs, strand, vert...
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def RLT(n, f): """run length transform of a function f""" return prod(f(len(d)) for d in split("0+", bin(n)[2:]) if d != "") if n > 0 else 1
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def diagonal(a, offset=0, axis1=None, axis2=None, extract=True, axes=None): """ diagonal(a, offset=0, axis1=None, axis2=None) Return specified diagonals. If `a` is 2-D, returns the diagonal of `a` with the given offset, i.e., the collection of elements of the form ``a[i, i+offset]``. If `a` h...
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import argparse def get_arguments(): """ Defining the arguments available for the script :return: argument parser """ parser = argparse.ArgumentParser() # Ads setting parser.add_argument("-bud", "--cum_budget", default=CUM_BUDGET, help="Cumulative budget to be use...
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def _check_expression(text, allowed_variables=None): """ >>> allowed_variables = ["c1", "c2", "c3", "c4", "c5"] >>> _check_expression("c1", allowed_variables) True >>> _check_expression("eval('1+1')", allowed_variables) False >>> _check_expression("import sys", allowed_variables) False ...
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import os def build_exception_info(item_name, exc_type, exc_value, traceback): """Generate description info about exceptions.""" exc_info = None if exc_type and (exc_type, exc_value, traceback) != pytest.item_status_info[item_name].get("exc_info", None): if exc_type is AssertionError: ...
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from pathlib import Path def build_algod_local_client(data_dir: Path) -> AlgodClient: """ Build the `algod` client to interface with the local daemon whose configuration is at `data_dir`. Args: data_dir: the path with the network data Returns: the client connected to the local al...
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def set_read_only(khoros_object, enable=True, msg_id=None, msg_url=None, suppress_warnings=False): """This function sets (i.e. enables or disables) the read-only flag for a given message. :param khoros_object: The core :py:class:`khoros.Khoros` object :type khoros_object: class[khoros.Khoros] :param en...
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def reports_download(request, file_name): """Generic method for downloading files.""" try: file_path = '%s/%s' % (MEDIA_ROOT, file_name) fp = open(file_path, 'rb') response = HttpResponse(fp.read()) fp.close() mime_type, encoding = mimetypes.guess_type(file_name) ...
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def bucket_sort(array: list[int]) -> list[int]: """ Time Complexity of Solution: Worst Case: occurs when all the elements are placed in a single bucket. The overall performance would then be dominated by the algorithm used to sort each bucket. In this case, O(n log n), because of TimSort. Avera...
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def create_tokenizer_from_hub_module(): """Get the vocab file and casing info from the Hub module.""" with tf.Graph().as_default(): bert_module = hub.Module(BERT_MODEL_HUB) tokenization_info = bert_module(signature="tokenization_info", as_dict=True) with tf.Session() as sess: vocab_file, do_lower_...
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def get(package, plugin): """Get a given plugin""" _import(package, plugin) return _PLUGINS[package][plugin].func
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def read_paragraph_element(element): """Returns the text in the given ParagraphElement. Args: element: a ParagraphElement from a Google Doc. """ text_run = element.get('textRun') if not text_run: return '' return text_run.get('content')
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def telnet_read_eager(tn: ConnectionInformation, wf: object, current_output_log: [str], enable_removeLF: bool) -> str: """ Dealing with unread material. """ if tn.eof: return False try: # current_output = tn.read_very_lazy() # Not recommended because it will be blocked. cur...
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def parse_play(play): """ Parses formatted PLAY and returns ??? FIXME """ return None
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def parse_int(integer, default=None): """提取整数,若失败则返回default值""" try: return int(integer) except Exception, e: return default
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def ctd_sbe16digi_preswat(p0, t0, C1, C2, C3, D1, D2, T1, T2, T3, T4, T5): """ Description: OOI Level 1 Pressure (Depth) data product, which is calculated using data from the Sea-Bird Electronics conductivity, temperature and depth (CTD) family of instruments. This data product...
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import hashlib def sha256(file: str): """ Reads a file content and returns its sha256 hash. """ sha = hashlib.sha256() with open(file, "rb") as content: for line in content: sha.update(line) return sha.hexdigest()
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import logging def make_div_share_variable(exposure_level=7, div_level=3): """Calculates the share of employment in a low diversification sector Args: exposure_level (int): min threshold for high exposure div_leve (int): min threshold for low diversification """ _DIVISION_NAME_LOOKUP ...
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def _user_has_perm(user, perm, obj): """ A backend can raise `PermissionDenied` to short-circuit permission checking. """ for backend in auth.get_backends(): if not hasattr(backend, 'has_perm'): continue try: if backend.has_perm(user, perm, obj): r...
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def gcd(a, b): """ Computes the greatest common divisor between the two numbers using Euclid's algorithm. """ if b == 0: return a else: return gcd(b, a % b)
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def rect_crop_2D(im, rect_spec): """following imageJ style rectangle specification""" left, top, width, height = rect_spec im_crop = im[top:top+height, left:left+width].copy() return im_crop
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def encode_multipart_formdata(fields, files): """ @param fields: sequence of (name, value) elements for regular form fields. @param files: sequence of (name, filename, value) elements for data to be uploaded as files @return: (content_type, body) ready for httplib.HTTP instance """ boun...
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def coverage_err(y_true, y_pred): """ Coverage error: For every sample, how far down the ranked list of predicted classes must we reach to get all actual class labels? The average value of this metric across samples is the coverage error. :param y_true: array of shape (n_samples, n_labels) :par...
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def login(*args, **kwargs): """ Override view to use a custom Form """ kwargs['authentication_form'] = AuthenticationFormAccounts return login_base(*args, **kwargs)
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def _calculate_bearings(graph, nodes): """ Calculate the compass bearings for each sequential node paid in `nodes`. Lat/lon coordinates are expected to be node attributes in `graph` named 'y' and 'x'. Args: graph (networkx graph): containing lat/lon coordinates of each node in `nodes` ...
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import uuid import json def fetch_perfmap(client_id=uuid.uuid4(), debug=False): """Grabs the perfmap information from the Fastly API endpoint Returns: json: the data to use for remaining perf data collection """ url = '/perfmapconfig.js?jsonp=FASTLY.setupPerfmap' hostname = str(client_id)...
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def lookup_capacity(lookup, environment, ant_type, frequency, bandwidth, generation): """ Use lookup table to find the combination of spectrum bands which meets capacity by clutter environment geotype, frequency, bandwidth, technology generation and site density. """ if (environment, ant_ty...
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from typing import Any def option(parser: Parser, otherwise: Any = None) -> Parser: """Create a parser that succeeds even when the given parser does not. If nothing was parsed, then the value that was parsed is |otherwise|. """ def fn(parse_state): """Parse with parser, return value of None i...
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import json def to_json(response): """ Return a response as JSON. """ assert response.status_code == 200 return json.loads(response.get_data(as_text=True))
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def num(s): """This function is used to convert string to int or float.""" try: return int(s) except ValueError: return float(s)
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from pathlib import Path def equalize(request): """ヒストグラム平坦化関数""" # キャッシュディレクトリを作成 cache_dir = Path(__file__).parent.joinpath('cache').joinpath('equalize') cache_dir.mkdir(parents=True, exist_ok=True) # 画像データをbase64形式で取得 base64image = request.POST.get('image') # base64をバイナリデータに変換し、ヘッダーも同...
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def mutation_frequency(H, D): """ # ======================================================================== MUTATION FREQUENCY PURPOSE ------- Calculates the mutation frequency. INPUT ----- [INT] [H] The number of haplotypes. [2D ARRAY] [D] A distance mat...
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from datetime import datetime def _parse_given(rtype: str, report: str, opts: [str]) -> (dict, int): """ Attepts to parse a given report supplied by the user """ try: ureport = _HANDLE_MAP[rtype]("KJFK") # We ignore the station ureport.update(report) resp = asdict(ureport.data...
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def new_feature(signal): """Computes a new feature Parameters ---------- signal : nd-array Input from which new feature is computed Returns ------- float new feature """ return np.mean(signal)-np.std(signal)
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import os def __test_path(path, chk_type, nonexistent=None, not_ok_msg=None): """ Test a file path, to see if it is exists and is a file :param path: path to filesystem object to check :type chk_type: type to check for; __ISFILE or __ISDIR :param nonexistent: message to display if nonexistent ...
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def SKPD_processing(Cov_MPMB, opt_str): """SKPD_processing Kernel of the Sum of Kronecker Product Decomposition. INPUT Cov_MPMB: [N*Npol x N*Npol] covariance matrix opt_str. N: number of images Npol: number of polarization...
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from typing import Optional from typing import Tuple def dhall_type(value: Property, name: str, types: Types, defs: Defs) -> Optional[Tuple[DhallType, Types]]: """Convert a property to a dhall type name. Also add newly discovered types to the list of types""" _type: Optional[str] = None # TODO: remove th...
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def get_public_keys_of_user(session, user_id): """Retrieve all public keys for user. Args: session(models.base.session.Session): database session user_id(int): id of user in question Returns: List of PublicKey model object representing the keys """ pkey = session.query(Publ...
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def avgFriendDegree(v, Giant): """ Calculate the average degree of the neighbors of a node""" degSum = 0 for u in Giant.neighbors(v): degSum += Giant.degree(u) return degSum / Giant.degree(v)
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def create_snapshot_if_not_exist(volume_id, tags, time_limit): """ Create a snapshot of the volume in parameter only if any snapshot exists for this volume_id and if it was created in the time delta define by the difference between now and the time_limit value (in minutes). :param ...
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def calculate_sigma_v(depths, gammas): """ Calculates the vertical stress """ depth_incs = depths[1:] - depths[:-1] depth_incs = np.insert(depth_incs, 0, depth_incs[0]) sigma_v_incs = depth_incs * gammas sigma_v = np.cumsum(sigma_v_incs) return sigma_v
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def lon_lat_to_cartesian(lon, lat, radius=1): """ calculates lon, lat coordinates of a point on a sphere with radius radius """ # Unpack xarray object into plane arrays if hasattr(lon, 'data'): lon = lon.data if hasattr(lat, 'data'): lat = lat.data if lon.ndim != lat.nd...
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