content
stringlengths
35
762k
sha1
stringlengths
40
40
id
int64
0
3.66M
def transform_stamped_to_pq(msg): """Convert a C{geometry_msgs/TransformStamped} into position/quaternion np arrays @param msg: ROS message to be converted @return: - p: position as a np.array - q: quaternion as a numpy array (order = [x,y,z,w]) """ return transform_to_pq(msg.transform)
345946e47993972dc11bd017b663f07bf874b238
3,626,100
def parse_args(): """Parsing command line arguments. """ parser = ArgumentParser() parser.add_argument('--postgres-pass', dest='postgres_pass', type=str, help='PostgreSQL user password', default='') parser.add_argument('--postgres-user', dest='postgres_user', type=str, ...
4305830ffaecb546936b88e768dc79722cc6f054
3,626,101
def run(bsuite_id: Text) -> Text: """Runs a BDQN agent on a given bsuite environment, logging to CSV.""" env = bsuite.load_and_record( bsuite_id=bsuite_id, save_path=FLAGS.save_path, logging_mode=FLAGS.logging_mode, overwrite=FLAGS.overwrite, ) num_features = 32 #fixed param now, TODO: ...
b4d94a44481818b1df229f35e200527b6bc38c23
3,626,102
from typing import OrderedDict def recursive_module_dict(model: nn.Module) -> OrderedDict: """Recursively generates an OrderedDict representing the module structure in a nn.Module. :param model: The (sub-)module for which to generate the structure :type model: torch.nn.Module :return: Structure of th...
061f29b55582147d07822d64ef23ba1f5e519efa
3,626,103
from cntk.ops.cntk1 import ReduceMin def reduce_min(value, axis=0, name=None): """ For axis < rank computes the minimum of a tensor along the specifed axis. In the result the corresponding axis is dropped, i.e. the rank of the result tensore is smaller that the rank of the input tensor. if axis==rank, the...
f25f106b4b9ae18e33ff580464ca782201ac6f28
3,626,104
def sparse_js_distance(p, q): """Compute the Jensen-Shannon distance between two discrete distributions. NOTE: JS divergence is not a metric but the sqrt of JS divergence is a metric and is called the JS distance. Parameters ---------- p : np.array probability mass array (sums to 1) ...
7b05f567594a8cfcc3907006569fe73ede153343
3,626,105
def key_or_none(value): """ Attempts to parse a value into an instance of an `ndb.Key`. :returns: None if value cannot be converted to an `ndb.Key`. """ if not value: return None if isinstance(value, str) and len(value) < 1: return None return ndb.Key(urlsafe=value)
60480c7841cd87c762bb3debb0e212eb0011c0d3
3,626,106
def get_training_dataset(workspace, class_count, vocab, max_chapter_len=50, max_para_len=50): """ Get the GB h2 chapter training dataset. :param workspace: The workspace directory where the TFRecords are kept. :param class_count: The number of classes to be classified. :param vocab: the set of vocab...
14d135dde973f155ee0f5883297f5c2a376ba61a
3,626,107
def get_https_host(request): """Common enabler code for returning https urls This is to map links to HTTPS to avoid Mixed Content warnings from Chrome browsers SECURE_PROXY_SSL_HEADER is referenced because it is used in redirecting URLs - if it is changed it may affect this code. Using relative lin...
f48445ae0fd12c81b175543c4445f11155302f75
3,626,108
from typing import Callable def start(action: QueryAction) -> Callable: """Initialize the query for a given action, ensuring no action has started.""" def wrapper(fn): def wrapped(self, *args, **kwargs): if self._action != QueryAction.unset: raise BuildError(f"query alread...
2d9d2e92803405ae40758b1b1c28ac7275ff7b5b
3,626,109
def xtea_decrypt_all(data, key, endian="!"): """Decrypt a entire string using XTEA block cypher""" newdata = '' data_s = len(data) data_p = data_s%8 if data_p: data_pl = 8-data_p data+=(data_pl*chr(0)) data_s+=data_pl for i in xrange(data_s/8): block = data[i*8:(i*8)+8] newdata+=xtea_decrypt(block, key,...
19fdfb1bdca3033bf7dd6d7a84641a936d32b7aa
3,626,110
import subprocess import sys def subprocess_call(args, cwd, capture_output=False, **kwargs): """Calls a subprocess, possibly capturing output.""" try: if capture_output: return subprocess.check_output(args, cwd=cwd, **kwargs) else: return subprocess.check_call(args, cwd=cwd, **kwargs) except...
956837dae6e7b74f1e51cd87e4c920bfe08eb2d0
3,626,111
def enthalpy_Shomate(T, hCP): """ enthalpy_Shomate(T, hCP) NIST vapor, liquid, and solid phases heat capacity correlation H - H_ref (kJ/mol) = A*t + 1/2*B*t^2 + 1/3*C*t^3 + 1/4*D*t^4 - E*1/t + F - H t (K) = T/1000.0 H_ref is enthalpy in kJ/mol at 298.15 K...
05e3f3a35a87f767a44e2e1f4e35e768e12662f7
3,626,112
from typing import Union from typing import List import array def hz_to_mel(frequencies: Union[float, List[float], array], htk: bool = False) -> array: """Convert Hz to Mels This function is aligned with librosa. """ freq = np.asanyarray(frequencies) if htk: return 2595.0 *...
16373a9358e4bbae3baef02567c80abc4ba48c83
3,626,113
def _std_to_grib1_field_name(field_name, pressure_level_mb=None): """Converts field name from standard to grib1 format. :param field_name: Field name in standard format (must be accepted by `processed_narr_io.check_field_name`). :param pressure_level_mb: Pressure level (millibars). For surface fie...
f5f63a61d81f919f814a7e85465afd42a10f6b19
3,626,114
import os import json def get_package_index(url, session=setup_session()): """Return the Elm package index and also store it in PACKAGE_ROOT.""" logger.info('Fetching package index...') data = session.get(url).text with open(os.path.join(PACKAGE_ROOT, 'all-packages'), 'w') as out: out.write(da...
1e025c629d0fbbda4bab1778fc2fb09922ae5e3b
3,626,115
def get_acres(grid, coordinates): """Get acres from coordinates on grid.""" acres = [] for row, column in coordinates: if 0 <= row < len(grid) and 0 <= column < len(grid[0]): acres.append(grid[row][column]) return acres
e4ba6aabe07d8859481aefaba4d4559f1ec25e96
3,626,116
import os import pathlib def get_path_infos(path): """Get basic informations from a path""" path = fspath(path) path = os.path.abspath(path) path = pathlib.PurePath(path) return PathInfos( path.drive, str(path.parent), path.name, path.stem, path.suffix, ...
865b30a696dcae526594a51784dc1f859da4c441
3,626,117
def parse_noj(): """ Parsing Nojabrsk (NOJ) airport arrivals and departure data :return: list [list of dicts arrivals, list of dicts departures] """ print('parse_noj') json_data = get_json(NOJ_URL).get('result').get('response').get('airport').get('pluginData').get('schedule') arr_data = get...
601ac9f1bc5d6f2fed4f08f8fb91e095bceadf7f
3,626,118
def _filter_unlabeled_sentences( characterwise_predicted_label_names_per_sentence, words_per_sentence, unlabeled_sentence_filter): """Filters sentences without any predicted labels. Keeps every nth entry.""" sentences_without_label = 0 filtered_characterwise_predicted_label_names_per_sentenc...
a17a0dc3ba61ce542585cba31c87621f5a772e20
3,626,119
def highest_mag(slide): """Returns the highest magnification for the slide """ return int(slide.properties['aperio.AppMag'])
d42361c979a5addf0ebf4c7081a284c9bc0477ec
3,626,120
def is_crud(crud): """Check if item is subclass of <GQL>""" its_crud = False try: if not crud == GQL: its_crud = issubclass(crud, GQL) except TypeError: pass return its_crud
2e817cdb0adaa880d7f027a4020ff490b76c5f56
3,626,121
from typing import Dict def matrixProfile(ts: Matrix, **kwargs: Dict[str, VALID_INPUT_TYPES]): """ Builtin function that computes the MatrixProfile of a time series efficiently using the SCRIMP++ algorithm. .. code-block:: txt References: Yan Zhu et al.. 20...
860060b2dfde01b82e66754274a59616e8d45e40
3,626,122
import sys def create_evaluations(model_or_ensemble_ids, datasets, evaluation_args, args, api=None, path=None, session_file=None, log=None, existing_evaluations=0): """Create evaluations for a list of models ``model_or_ensemble_ids``: li...
895968d1a39503c1d798e0be4258a709598fbe75
3,626,123
def pegar_por_href(navegador, link): """Encontrar o elemento `a` com o link `link`. Argumentos: - browser = Instancia do browser [firefox, chrome, ...] - link = link (ou parte dele) que será procurado em toda as tags `a` """ elementos = chrome.find_elements_by_tag_name('a') for e...
8c3ea4ebc42b03d61c79f6a6666b82d41cb36902
3,626,124
def import_txt(file_name, two_dimensional=False, **kwargs): """ Reads control points from a text file and generates a 1-dimensional list of control points. The following code examples illustrate importing different types of text files for curves and surfaces: .. code-block:: python :linenos: ...
5b17f8fe85de759ad240b36544b4c9231afdcda9
3,626,125
def sizeAbove(resource, value): """ Check if the contentSize attribute of the <contentInstance> resource is equal to or greater than the specified value. :param resource: :type resource: :param value: :type value: :return: :rtype: """ try: return resource.contentSize ...
50e92811c9c8ee13db615137f6d92c4a3edabfda
3,626,126
from typing import Dict def decode_delegate_call_trace(trace: Dict[str, any], next_trace: Dict[str, any]) -> DecodedCallTrace: """ Takes a trace and decodes it. It needs next trace for return value Structure for CALL and CALLCODE: gas | addr | argsOffset | argsLength | retOffset | retLength """ ...
a7292043934fb62323f617587b953277a64686d4
3,626,127
import re def enumerate_destination_file_name(destination_file_name): """ Append a * to the end of the provided destination file name. Only used when query output is too big and Google returns an error requesting multiple file names. """ if re.search(r'\.', destination_file_name): dest...
6b398597db26a175e305446ac39c363a5077ba96
3,626,128
def Flux_Quad(wpert, thetapert): """ Separates fluxes into quadrants Arguments: wpert -- array of w perturbations thetapert -- array of theta perturbations Returns: [up_warm, down_warm, up_cold, down_cold] -- arrays, np.nans are fillers """ [rows, columnsx, columnsy] = ...
d1f6a278deb60507cd05ed367b0c6dd13704ad28
3,626,129
def demistoVersion(): """Retrieves server version and build number Returns: dict: Objects contains server version and build number """ return { 'version': '5.5.0', 'buildNumber': '12345' }
39ef34f88f44ecfad9d30a80bcdb74ad1833c3ae
3,626,130
def classification_metric(all_real, all_pred, all_prob): """ Metric used for experiments Args: all_real (list): real labels (ground truth) with n values all_pred (list): predictions for n predictions all_prob (list or np.array): probabilities (confidence). If it is ...
69f03e92c298e951b56ec32fd268fe859d66927e
3,626,131
def camel_to_human(s, lower=True): """ Converts camel case to 'human' case Arguments: ---------- lower: bool (default: False) Convert output to lower """ ret = start_of_camel.sub(r" \1", s).strip() if lower: ret = ret.lower() return ret
c00c21f469bca03af484a8d9ada86bfa3ed7e6b7
3,626,132
import random def dice_game (): """ Function for manage all the game. @rtype: None @return: Return None when the game is ended """ scores = { TypeOfPlayers.PLAYER: 0, TypeOfPlayers.COMPUTER: 0 } who_play = TypeOfPlayers.COMPUTER while not game_is_ended(scores): print('------------------...
d5940ac0d2c4aec3ba225b72e30de4da443080df
3,626,133
import os def create_work_name(name): """ Remove ".nzb" and ".par(2)" """ strip_ext = ['.nzb', '.par', '.par2'] name = name.strip() if name.find('://') < 0: name_base, ext = os.path.splitext(name) # In case it was one of these, there might be more while ext.lower() in strip_ext...
5e5405505a7c342ebb372ea53ad8330919b0979a
3,626,134
def edit_affiliations(request, affiliation_formset): """ Edit affiliation information Helper function for `project_authors`. """ if affiliation_formset.is_valid(): affiliation_formset.save() messages.success(request, 'Your author affiliations have been updated') return True ...
04cfddd8be2299531d27baf8cb74c909ef40da19
3,626,135
import json def tojson(x): """ python2/3 compatible conversion to json string """ return tobytes(json.dumps(x))
94ec37a5c5a22516369d69a4b60f63c4196cb329
3,626,136
def prob_remap_bcg(upid, host_halo_mass, mhalo_table=(13.5, 13.75, 14, 15), prob_table=(0, 0.1, 0.5, 1)): """ """ ngals = len(upid) prob_remap = np.interp(np.log10(host_halo_mass), mhalo_table, prob_table) uran = np.random.rand(ngals) uran[upid != -1] = 1.0 return uran < prob_re...
0e2c4bdd6f57e9f751b80a8ac366737d2756ae4c
3,626,137
def rsf_score(year, flu_space, sections, section_neighbors, buildings, access_variables): """ Scores/weights for single family development. """ # get projects projs = flu_space.to_frame(['building_type', 'project_type', 'total_units', 'built_units', 'p...
563ccfdafa86c4248558f66feab97edf8252a660
3,626,138
from typing import List import requests import json def retrieve_all_plans() -> List[str]: """Return the names of all plans stored in the plan engine.""" url = _plan() response = requests.get(url=url) _raise_for_status(response) plans: List[str] = json.loads(response.text) return plans
e915cf64f5e17fca6ac0fcf17b3f2b68b2fb615a
3,626,139
from typing import List def load_task_names(path: str) -> List[str]: """ Loads the task names a model was trained with. :param path: Path where model checkpoint is saved. :return: A list of the task names that the model was trained with. """ return load_args(path).task_names
b9feb1e91d3449bbc98aa376a60ba40ac7d440b2
3,626,140
def sample_seq2seq(news_config: LMConfig, initial_context, eos_token, ignore_ids=None, p_for_topp=0.95, do_topk=False, max_len=1025): """ Sample multiple outputs for a model in a seq2seq way. :param news_config: Configuration used to construct the model :param initial_context: [batch...
a9e5d3beb052acbb9cd8b753df5975ac319fac34
3,626,141
def unquote_plus(s): """unquote('%7e/abc+def') -> '~/abc def'""" s = s.replace('+', ' ') return unquote(s)
2ffe054ae8fbec96d6435e242bf88ec7c871270e
3,626,142
def _rankf(x): """ Return an integer valuation of float32 x """ shift = int32(31) mask = int32((1 << 31) - 1) i32 = x.view(int32) value = i32 >> shift value &= mask value ^= i32 return value
841d49acd08b39dba716b6c41bdb3316208a9c43
3,626,143
import pip.utils.ui import pip.utils.ui import pip import logging import tempfile import os import shutil def extract_package_to_dir(package_url): """ Extracts a pip package to a temporary directory. :param package_url: the URL to the package source. :return: the directory the package was extracted ...
ceb749532ccc200967cf5a9e5881e1e685c18901
3,626,144
from typing import List def reorder_tables(openapi_yaml: sy.YAML) -> List[sy.Str]: """Orders the tables so no table references another table that might be defined after. Parameters ---------- openapi_yaml Contains the openapi format describing the database schema Returns ------- t...
a16f496effe1b52a685c8d82a7f85a3ecc6282e7
3,626,145
def video_feed(): """ Video streaming route. Put this in the src attribute of an img tag. """ txt = 'multipart/x-mixed-replace; boundary=frame' # WS added passing a message to the Camera class return Response(gen(Camera(message=msg)), mimetype=txt)
e5626cf86617beecd54afe173eb052629cd58179
3,626,146
def bias_act(x, b=None, dim=1, gain=None, clamp=None): """Slow reference implementation of `bias_act()` """ # spec = activation_funcs[act] # alpha = float(alpha if alpha is not None else 0) gain = float(gain if gain is not None else 1) clamp = float(clamp if clamp is not None else -1) # Add...
3e98d5941d29c78ecd5c46c9ec960f14cedc36e9
3,626,147
import click import io import yaml def init(): """Return top level command handler.""" ctx = {} @click.group() @click.option('--cell', required=True, envvar='TREADMILL_CELL', callback=cli.handle_context_opt, expose_value=False) @click.option(...
b19e0b358f2b1288aeda6c963240de4f0369d187
3,626,148
def process_json_file(file_name, grounding_ns=None, extract_filter=None, grounding_mode=default_grounding_mode): """Return an EidosProcessor by processing the given Eidos JSON-LD file. This function is useful if the output from Eidos is saved as a file and needs to be processed. ...
e8dedc0adad8e1e22199e6c6b83c3489f20c0570
3,626,149
def accumulate_ip_for_certificate(value): """ A convenience function that wraps the results of 'search_ip_for_certificate' into a Python list. :param value: The certificate value for which to search :return: The list of IP addresses :raises LookupException: If there was an error performing the look...
80664c1111bb113237247a7b35e4dafb60fdd4f5
3,626,150
def combine_envs(*envs): """Combine zero or more dictionaries containing environment variables. Environment variables later from dictionaries later in the list take priority over those earlier in the list. For variables ending with ``PATH``, we prepend (and add a colon) rather than overwriting. If...
feb6e00b9c0b1262220339feac6c5ac2ae6b6b17
3,626,151
import logging def get_request_data() -> dict: """ Get keys & values from request. (Note that this method parse requests with content type "application/x-www-form-urlencoded") """ data = dict(request.values) logging.info(f"received request: {data}") return data
0f3b2a104d0282a6846031ed84e68af1e91071ac
3,626,152
import torch def generate_square_subsequent_mask(sz): """ Generate attention mask using triu (triangle) attention """ mask = (torch.triu(torch.ones(sz, sz)) == 1).transpose(0, 1) mask = ( mask.float() .masked_fill(mask == 0, float("-inf")) .masked_fill(mask == 1, float(0.0)...
5631e89a275eee13c4b01a7b856421f6b45c2588
3,626,153
def tree_graph(data, attrs=_attrs): """Return graph from tree data format. Parameters ---------- data : dict Tree formatted graph data Returns ------- G : NetworkX OrderedDiGraph attrs : dict A dictionary that contains two keys 'id' and 'children'. The correspo...
2cc012b7ffc32f1bd0ac5db0ac5bd912dec81c75
3,626,154
def retry_on_mysql_lock_fail(metric=None, metric_tags=None): """Function decorator to backoff and retry on MySQL lock failures. This handles these MySQL errors: * (1205) Lock wait timeout exceeded * (1213) Deadlock when trying to get lock In both cases, restarting the transaction may work. It...
91c2d82401677e6cdab1d4131a9f02be26cbbbf8
3,626,155
from datetime import datetime def eot(date: datetime.date, offset: int = 0) -> datetime.date: """ Returns the end of the calendar trimester, i.e. one of 30 April, 31 August or 31 December, then optionally offsets it by :code:`offset` trimesters Parameters ---------- date : datetime.date...
5594d60c7e5ebe8c1f2686f6b8eb68f89ddb0987
3,626,156
def generate_activation_url(token_name: str, token_value: str) -> str: """ Generates url with token_name=token_value embedded in it. :param token_name: :param token_value: :return: """ return Config.FRONT_END_URL + "?" + f"{token_name}={token_value}"
db58a3d4b55276229486dbddb86ea51383393a10
3,626,157
import struct def native_type_range(fmt): """Return range of a native type.""" if fmt == 'c': lh = (0, 256) elif fmt == '?': lh = (0, 2) elif fmt == 'f': lh = (-(1<<63), 1<<63) elif fmt == 'd': lh = (-(1<<1023), 1<<1023) else: for exp in (128, 127, 64, 6...
dc8362aadece611b45b05f775cd0a95eefabcad7
3,626,158
def get_action(affordance_map, epsilon, open_scales): """Get action based on affordance_map. Args: affordance_map: [S, K, W, H] epsilon: random aciton based on prob VS choose best aciton. If epsilon < 0: get action with best score open_scales: list of open_scales [S] Returns: ...
df34e426ba85198bd84f81046969b92dec9013a8
3,626,159
def drop_shadow(image, offset=(5, 5), background=0xffffff, shadow=0x444444, border=8, iterations=5): """ Add a gaussian blur drop shadow to an image. image - The image to overlay on top of the shadow. offset - Offset of the shadow from the image as an (x,y) tuple. Can be ...
f8bb75d7e648144bf351527f43c74c801e1a7120
3,626,160
import random import tqdm def get_s_test(z_test_grad, z_losses, params, damp=0.01, scale=25.0, recursion_depth=20000, threshold=1e-8): """s_test can be precomputed for each test point of interest, and then multiplied with grad_z to get the desired value for each training point. Here, strochastic estimatio...
cdf460d305ade66cc106f53ca0b7bd687c1dcf3e
3,626,161
def to_fft_image(fft_mat, is_shift=False): """Convert frequency matrix to visual image""" if is_shift: fft_mat = np.fft.fftshift(fft_mat) log_mat = 20*np.log(np.abs(fft_mat)) return np.uint8(np.around(log_mat))
f1bd9c50879a32a0624db62587463a94e3cbbd09
3,626,162
def np_normal(shape, random_state, scale=0.01): """ Builds a numpy variable filled with normal random values Parameters ---------- shape, tuple of ints or tuple of tuples shape of values to initialize tuple of ints should be single shape tuple of tuples is primarily for conv...
b12b82602d2d465195f0576bdb29446a6a7b9331
3,626,163
from typing import Optional from typing import Callable from typing import Awaitable def head( path: str, /, *, name: Optional[str] = None, include_in_schema: bool = True ) -> Callable[[Callable[[Request], Awaitable[Response]]], Route]: """decorator to create a Starlette Route for HEAD requests from an endpoi...
162ea8d05926e3fad6a285ff8b6db86efb800bd5
3,626,164
def api_hash_key(*args, **kwargs): """参考cachetools hashkey实现,对WSGIRequest参数对象进行特殊处理""" new_args, _ = deal_request_args(False, *args) return hashkey(*new_args, **kwargs)
15527ebd43b809d27919aec1648aa24802d61826
3,626,165
def len_column(table): """ Add length column containing the length of the original entry in the seq column. Insert a number column with numbered entries for each row. """ for pos, i in enumerate(table): i.insert(0, pos) i.append(len(i[1])) return table
5a9215bc2feade70873de6adccd2b4c4b6acfed9
3,626,166
def _binary_roc_auc_score(y_true, y_score, sample_weight=None, max_fpr=None): """Binary roc auc score""" if len(np.unique(y_true)) != 2: raise ValueError("Only one class present in y_true. ROC AUC score " "is not defined in that case.") fpr, tpr, _ = roc_curve(y_true, y_sco...
a21058fb927fb5dfa9d727eaa5f8251ebc9a0c5e
3,626,167
import logging def build_service_set(gtfs_data): """Based on the calendar, figure out which service IDs should run for each date""" # The master dict of days # Keys are the dates, the values are a list of service IDs that run for # that day service_days = {} # Loop through each service ID...
16bab43dd5607e94e4775428b87fb7836fe6ec13
3,626,168
def manage_org_users(request): """ View to manage the users of an organisation Should only be accessed by admin users of the organisation """ if request.user.is_org_admin: context_dict = {} context_dict['organisation_users'] = request.user.organisation.get_users() context_dic...
def1899fc8c6afb50166361ec80b7355a71f2773
3,626,169
def get_confusion_noise_robson19(f, t_obs=4 * u.yr): """Calculate the confusion noise using the model from Robson+19 Eq. 14 and Table 1 Also note that this fit is designed based on LISA sensitivity and so it is likely not sensible to apply it to TianQin or other missions. Parameters ---------- ...
f58dcf51c1cb499d5bf04155c38d12263179b277
3,626,170
def default(): """ Simply calls :func:`get` for the default endpoint. """ return get()
45ed6b65d6d3191688d1f21556500dfe5bb14c48
3,626,171
import torch def direct_1d(x, x_s, dx, dt, c, f): """Use the 1D Green's function to determine the wavefield at a given location due to the given source. """ r = torch.abs(x - x_s).item() t_shift = (r / c) / dt u = dx * dt * c / 2 * torch.Tensor(np.cumsum(shift(f, t_shift))) return u
6eaf3754b95ad0202cbd6ef5bbdeda86acfa8ef9
3,626,172
def test_basic_state_transition(circuit): """Test the basic FSM function.""" class B123(edzed.FSM): STATES = 'S1 S2 S3'.split() EVENTS = [ ('step', ['S1'], 'S2'), ['step', None, 'S3'], # default rule has lower precedence ('step', 'S3', 'S1') # single stat...
47e9ad590e03515ac2c790a8e4b8fda071179c6e
3,626,173
def home(): """ Home Page """ print("### Home Page Loaded ###") return render_template('index.html', page="Home")
21e47410da3113ecc56a3211a7f855c39a82cac7
3,626,174
def group_conv(N, H, W, CI, CO, group, KH, KW, PAD_H, PAD_W, SH, SW, cutH, cutCo, cutM, cutK, cutN, block_size, use_bias=False, kernel_name='conv'): """ split channels of FeatureMap to some groups,every group has its filter-kernel Args: args1:a list,the size is 3 if use_bias else the size is 2; ...
96534916b0c1b575771402ba008a5060c9da70db
3,626,175
import math import torch def read_alignment( filename, format=None, *, max_taxa=math.inf, max_characters=math.inf ): """ Reads a single alignment file to a torch tensor of probabilites. :param str filename: Name of input file. :param str format: Optional input format, e.g. "nexus" or "fasta". ...
dc6d724fc9a8ece4ac9d6a06394d01310a9fa5bc
3,626,176
def auto_load_processed(path): """Load processed BEEP .json files regardless of their class. Enables loadfn capability for legacy BEEP files, since calling loadfn on legacy files will return dictionaries instead of objects or will outright fail. Examples: auto_load_processed("maccor_file_...
322c501719e7c6d33b9509cb357651bec4254f55
3,626,177
def grating_linear_dispersion( spec_inclusion_angle, spec_focal_length, spec_focal_length_tilt, spec_grooves_per_mm, spec_central_wavelength, spec_order, number_of_pixels, pixel_width, calibration_pixel, ): """ Parameters ---------- spec_inclusion_angle : float ...
589044391cebea828a28927810e0c9ed15121456
3,626,178
from functools import reduce def merge_columns_starting_positions(starting_positions, strict=True): """merging all lines starting positions""" starting_positions = tuple(set(starting_positions)) # If only one is provided, or all equals, return it if len(starting_positions) == 1: return starti...
dc2830816ea00fc93ff4c68844500b4663acc743
3,626,179
def fin_FoM_optbd(n,d,bc,a,b,cini=None,imprecision=10**-2,bdlmax=100,alwaysbdlmax=False,lherm=True): """ Optimization of FoM over SLD MPO and also check of convergence in bond dimension. Function for finite size systems. Parameters: n: number of sites in TN d: dimension of local Hilbert spa...
32ccaf247614d8a5a1ec98fbc6b5bf1b616b93fd
3,626,180
def create_cylinder(position, radius, height, orientation=(0,0,0), color=None, texture=None, mass=1, friction=0.1, client=0, isCollision=True): """ create cylinder in physical scene. ---------------------- position[3-element tuple]: Center position of the cylinder orientation[3-element tuple]: Euler...
413bdc1a5fcc74df2b2b04cecdfafcf1a88bd5fd
3,626,181
def read_maze(file_name): """ Reads a maze stored in a text file and returns a 2d list containing the maze representation. """ try: with open(file_name) as fh: maze = [[char for char in line.strip("\n")] for line in fh] num_cols_top_row = len(maze[0]) for row ...
373e121a9dc827307fc6b56350f8b19247115651
3,626,182
def tokenize_batch_question_answering(pre_baskets, tokenizer, indices): """ Tokenizes text data for question answering tasks. Tokenization means splitting words into subwords, depending on the tokenizer's vocabulary. - We first tokenize all documents in batch mode. (When using FastTokenizers Rust multi...
b63c581b0a3d696883aab76bacca32f82dfbb646
3,626,183
def format(number): """Reformat the number to the standard presentation format.""" number = compact(number) return (number[:-7] + '.' + number[-7:-4] + '.' + number[-4:-1] + '-' + number[-1])
c4bb448ee035c99bdbd3148be4bfef129209bd3c
3,626,184
def user_register(**kwargs): """ swagger_from_file: Swagger/user/register.yml """ data = kwargs['data'] data['password'] = UserInfo.generate_hash(data['password']) try: obj = dynamic_modify(UserInfo(), data).create() except Exception as e: return response(ResponseEnum.INVALID...
c1340fca05349ce94143ca7c6f9c875c755b62c2
3,626,185
def _check(sample, data): """Get input sample for each chip bam file.""" if dd.get_chip_method(sample).lower() == "atac": return [sample] if dd.get_phenotype(sample) == "input": return None for origin in data: if dd.get_batch(sample) in dd.get_batch(origin[0]) and dd.get_phenotyp...
47c17783b852ece100e5f7c9d04e9a0f6bb69650
3,626,186
def step_update(x, P, a, b, sd): """ Apply 'observation' of form a'x = b + N(0, sd^2) to obtain new x, P, useful for building priors :param x: n_k, n :param P: n_k, n, n :param a: n :param b: n_k, :param sd: :return: """ PCt = P @ a # n_k, n CPC_Q = PCt @ a + sd ** 2...
91e52a0c2696e1561c558f761e8d318ca51e64b8
3,626,187
def validate_single_message(schema, input_file, verbose): """Validate single message stored in input file.""" processed = 0 valid = 0 invalid = 0 error = 0 try: payload = load_json_from_file(input_file, verbose) processed = 1 validate(schema, payload, verbose) va...
1ef1854c9873e4df9ff6c61303a1a8d9e35e98d4
3,626,188
def sns_certificate(*args): """ Mock requests to retrieve the SNS signing certificate """ with open('tests/files/certificate.pem') as cert_file: cert = cert_file.read() return cert
6d1198c7ea3c29be28dbecf6affe5c31ab51267a
3,626,189
from scipy.spatial import cKDTree as KDTree def kldivergence(x, y): """Compute the Kullback-Leibler divergence between two multivariate samples. Parameters ---------- x : 2D array (n,d) Samples from distribution P, which typically represents the true distribution. y : 2D array (m,d) ...
55a512b6d720d065f32aa4a1877f10a8f9e03168
3,626,190
def match_any_if_key_matches(audit_id, result_to_compare, args): """ We want to compare things if we found our interested key Even if the list does not have my interested name, it will pass Match dictionary elements dynamically. Match from a list of available dictionaries There is an argument: matc...
0f96d2dc8d535dd91df9c2ef00e2a0c860803c10
3,626,191
def get_municipio_near_geo(geo_points, max_meters=15e+3): """ Parameters ----------- geo_points: list List containing (latitude, longitude) coordinates. max_meters: int, float Max. number of meters from the geo_points to the municipio centroid used to filter municipios. ...
5c16ff7174eb65639ab130b0b796c770c3ef9a5e
3,626,192
def replace_text_in_tables(page): """ Replace <p> tags with their contents because `html2text` has troubles with p tags inside tables. """ tables = page.find('body').find_all('table') has_colspan = False for table in tables: rows = table.find_all(["th", "tr"]) for row in rows...
eae9ba731b21bae36b018c80450d5060ed69fc35
3,626,193
def get_mirror_table (left, right, miraxis='x'): """ Return a mirror table between two object on chosen axis :param str left: object to compare to slave :param str right: object to compare to master :param str miraxis: 'x'(default) chosen world axis on wich mirror is wanted :return: list: return...
c35cb05282ac4486338916dfccf248e6531f30d2
3,626,194
def work_callback(ctx, param, value): """ Load correct work plugin and add it into the context """ plugin_name = plugin_callback(ctx, param, value) plugin_cls = get_work_plugins()[plugin_name] plugin = plugin_cls(config=ctx.obj["config"]) ctx.obj[param.name] = plugin return plugin
89c0a8f129c3ce450bb0d4e4534c482fea4f68c9
3,626,195
import numpy as np import math def wmh( flair, t1, t1seg, mmfromconvexhull = 12 ) : """ Outputs the WMH probability mask and a summary single measurement Arguments --------- flair : ANTsImage input 3-D FLAIR brain image (not skull-stripped). t1 : ANTsImage input 3-D T1 brain image (not skull-st...
70eba2400fde4bb8faa25b2ab85ce55a03ae3f2c
3,626,196
def translate_delta(mat, dx, dy): """ Return matrix with elements translated by dx and dy, filling the would-be empty spaces with 0. I feel this method may not be the most efficient. """ rows, cols = len(mat), len(mat[0]) # Filter out simple deltas if (dx == 0 and dy == 0): return m...
38492c874bc7bbd59787f4b2d94c2ea0150e69f8
3,626,197
def upscale_x( inputs, scale=4, scope='upscale_x' ): """mimic the tensorflow bilinear-upscaling for a fix ratio of x.""" with tf.variable_scope(scope): size = tf.shape(inputs) b = size[0] h = size[1] w = size[2] c = size[3] p_inputs = tf.concat((inputs, inputs[:, -1:, :, :]), ax...
f967d74db805d1aa04e96ef406caa56818df4080
3,626,198
import logging import json def audio_rttm_map(manifest): """ This function creates AUDIO_RTTM_MAP which is used by all diarization components to extract embeddings, cluster and unify time stamps input: manifest file that contains keys audio_filepath, rttm_filepath if exists, text, num_speakers if kno...
b7828393b5571c7b8ed67748ef9b188c00f90731
3,626,199