content stringlengths 35 762k | sha1 stringlengths 40 40 | id int64 0 3.66M |
|---|---|---|
def temp(input_temp):
"""
Formats input temperature with "+" or "-" sign
:param input_temp:
:return: formated temperature
"""
decimal = 0
temp2 = float(input_temp)
if temp2 < 0:
temp_sign = ''
elif temp2 > 0:
temp_sign = '+'
else:
temp_sign = ''
de... | 9ce3be3ec362761c2a6aa43e4ae4191c7a471667 | 3,605,200 |
from os.path import basename
def env_is_created(env_name):
"""
Assert an environment is created
Args:
env_name: the environment name
Returns: True if created
False otherwise
"""
for prefix in list_all_known_prefixes():
name = (ROOT_ENV_NAME if prefix == contex... | 4b808e7f987da0f8bbded74533695b06dfdf266d | 3,605,201 |
import time
def listarNoticias(api_obj: object, portais: tuple or list, qntd: int) -> list:
"""
Chama a função raspar_noticias() para cada conta em portais
Args:
api_obj: Objeto criado pelo tweepy, necessário para realizar ações na API do twitter.
portais: Lista contendo t... | b6edf7fae2d88de0c5cdf2314c7694421b64b536 | 3,605,202 |
from typing import Union
def INCREASING(x: Union[float, np.ndarray]) -> Union[float, np.ndarray]:
"""
Linearly increasing function over interval [0, 1].
"""
return 2 * x | 99a960ce687d031ef60f3e76f528dd089ca50284 | 3,605,203 |
def deposit_preview(submission_id: int) -> Response:
"""Deposit a preview PDF for a submission."""
stream = request.stream
data, code, head = controllers.deposit_preview(submission_id, get_body())
response: Response = make_response(jsonify(data), code, head)
return response | 634539d9e536c8a0c5f08fadad843a61e988e9c1 | 3,605,204 |
def parse_reads(reads, chromosome_name, fasta_handler):
"""
Given a set of pysam read objects, generate data for matches/mismatches/inserts/deletes and contig size/position for
each read
:param reads: pysam aligned segment objects
:param chromosome_name:
:param fasta_handler: fasta_handler objec... | e70a10ff4e03e13e5938bff2129100b790632a3e | 3,605,205 |
from datetime import datetime
def get_utc():
"""Basic function to get Datetime in Zulu"""
return "%sZ" % (datetime.datetime.utcnow().isoformat("T")) | 600e00f5719ec6b2ac1c131bc1b5c2db8ff2bf0f | 3,605,206 |
def send_ui(path = 'index.html'):
"""Send static content (HTML/CSS/JS/images/...)."""
log_request(request)
return flask.send_from_directory('html', path) | 8a462e49250de143bd2a6e195f3ca7d1f13dc0ac | 3,605,207 |
def extract_html(response):
"""Extracts an html page from the response.
"""
return htmlpage_from_response(response).body | eef1d5cce0e461d0b4f1f4de4e7bfc70459ddb81 | 3,605,208 |
import os
def remove(name: str) -> bool:
"""
Remove corpus
:param string name: corpus name
:return: True or False
"""
db = TinyDB(corpus_db_path())
temp = Query()
data = db.search(temp.name == name)
if len(data) > 0:
path = get_corpus_path(name)
os.remove(path)
... | 9b4810282d6d1a8827d0e991a9d14b06808c4b59 | 3,605,209 |
from tayph.vartests import typetest
import time
def end(start,id='',silent=False):
"""
Short-hand for ending a timing measurement and printing the elapsed time.
Parameters
----------
start : float
Generated by time.time()
id : str
Description or numeral to identify the clock ... | b692086cc85ce303adb8aa55bed2919607ef534b | 3,605,210 |
def epsilon_greedy_sample(nested_dist, eps=0.1):
"""Generate greedy sample that maximizes the probability.
Args:
nested_dist (nested Distribution): distribution to sample from
eps (float): a floating value in [0,1], representing the chance of
action sampling instead of taking argmax.... | 913f7bea99e866c2b697f64951317857fa9dfe9e | 3,605,211 |
import logging
def parse(line, app_name, source, dyno):
"""
return: exit: boolean. If true, we can stop this parser thread
"""
# Validate if the line matches the source and dyno
if source not in line or dyno not in line:
return False
root = app_name + settings.SEPERATOR + source + se... | 62a9e663ef41f4e257a89c880893bdfb3250556a | 3,605,212 |
def find_pattern(pattern, text):
"""
Find all the occurrences of the pattern in the text
and return a list of all positions in the text
where the pattern starts in the text.
"""
S = "".join([pattern, "$", text])
s = prefixFunction(S)
result = []
for i in range(len(pattern)+1, len(S))... | 6cb65af8bb1bb49d3db4ab214648982b27311a01 | 3,605,213 |
def exclude(*arg):
"""
excludes all HOSTLIST args from first HOSTLIST
:param: nodelist: The hostlist string.
:param: node: The node to be excluded.
:return: The resulting hostlist string without the nodes specified.
"""
nodelist = arg[0]
len_nodes = arg[1:]
for node in len_nodes:
... | 2fa61fad0f9743c70e6c42a39b7a81f7c60da34e | 3,605,214 |
def generateOldLibraryEntry(data):
"""
Return a list of values used to save entries to the old-style RMG
thermo database based on the thermodynamics object `data`.
"""
if isinstance(data, ThermoData):
return '{0:9g} {1:9g} {2:9g} {3:9g} {4:9g} {5:9g} {6:9g} {7:9g} {8:9g} {9:9g} {10:9g} {11:9... | b6c8d3c4e3c5d3c2d2466ef9b95baf2285b093f5 | 3,605,215 |
def get_cell_values(queries, subjects, key=len, attr=None):
"""Generates the values of cells in the binary matrix.
This function calls some specified key function (def. max) against all
values of a specified attribute (def. None) from Hits inside Subjects which
match each query. By default, this functi... | 4725a4c9f9dc291ff0e8595bb25f51c4612f747d | 3,605,216 |
def form_CheckboxRequired(request):
"""
Simple Boolean Checkbox with a required validator. Add an empty value if you want to force the user to add a tick
"""
schema = schemaish.Structure()
schema.add('checkbox', schemaish.Boolean(validator=validatish.Required()))
form = formish.Form(schema, 'fo... | f5a885826846e9effa4643777a094e73df45d746 | 3,605,217 |
def PointCloudObject(name,**kw):
"""
This function create a polygon representing the atom as point (vertex of the polygon).
@type name: string
@param name: name of the pointCloud
@type kw: dictionary
@param kw: dictionary of arg options, ie :
'vertices' array of coordinates ;
... | afdf1b716d6b57ae0a18c4b3cee81f9d0d47ab0c | 3,605,218 |
import curses
def scrolled_menu(window, datas: list, tag: str):
"""menu
cursesを使って引数のリストを表示してユーザーに選択を促す。
Args:
window: リストを表示/操作するcurses.Windowクラス
datas: 列挙する内容1つづつをdictとして保持したリスト
tag: datasのデータ1つの中で、表示する内容のkey
Returns:
int: ユーザーがリストの何番目を選択したのか値
"""
window.era... | f7ce97dbafdf7736a42a0da1e640788662be27d9 | 3,605,219 |
from typing import Union
import pathlib
import scipy
def read_matlab(input_file: Union[str, pathlib.Path]) -> dict:
"""
Read data from MATLAB file while performing some checks.
**Parameters**
- `input_file`: str or pathlib
Path to the input file.
**Returns**
- `res`: dict
... | 834fb52c4c8c6e93bd8f12d6b59e2dcba0ac525e | 3,605,220 |
import io
def load_poi_points(path: str) -> PoiPoints:
"""Load :py:obj:`PoiPoints` from a file.
Args:
path (str): The path to the file.
Returns:
:py:obj:`PoiPoints`: The data loaded.
"""
data = io._load(path)
return PoiPoints(data) | a1ddae115582d8a9ddad62edb612e4ce2b9f707e | 3,605,221 |
import requests
def get_yield():
"""A function that retrieves current Treasury Bond rates from the US Treasury website.
:return: Dictionary containing all the T-Bond terms as keys (strings) and their rates as values (floats).
"""
# Formatting of XML to Python Dict
curve = requests.get(GOV_YIELD_U... | a1eea5d1e022398cb099575b4b9f179b5c40b72c | 3,605,222 |
def ParseDate(date, messages, fmt='%Y-%m-%d'):
"""Convert to Date Type."""
datetime_obj = times.ParseDateTime(date, fmt=fmt)
return messages.GoogleTypeDate(
year=datetime_obj.year, month=datetime_obj.month, day=datetime_obj.day) | 941b707b6c9fd1e3cc4f114d0d1c4bb6db638840 | 3,605,223 |
import argparse
def init():
"""
script initialize. get arguments
:return:
"""
parser = argparse.ArgumentParser(description='This script is parsing wsgi_lineprof result')
parser.add_argument(
"-V",
"--version",
action="version",
version="wlreporter Version:{}".fo... | 0b147cd0c26a05be6e261db22fa4631674c0509b | 3,605,224 |
def and_(fst, snd):
"""Wraps the logical and function."""
return fst and snd | c03f2cb9178aa2863e2da58e4fe2741f4a98ea79 | 3,605,225 |
def AttenLogitsRPE(query, key, abs_pos_emb):
"""Attention logits from ...
https://arxiv.org/pdf/1803.02155.pdf with trainable rel position emb.
Notice padding is supposed to be masked by the caller of this function.
B: batch size
T: sequence length
N: num of attention heads.
H: per-head attention dimen... | 404b6288fc4df90edcfc45aacababb23671a4427 | 3,605,226 |
def config_factory(base_config, attr_list):
""" Create new config files from attribute dictionary.
"""
configs = []
for attr in attr_list:
# create deep copy of nested dict
config_cp = deepcopy(base_config)
# change value and append
change_nested_dict(config_cp, attr[0]... | 2a3852d7147fee49e408bdfa475468936609a5c3 | 3,605,227 |
def triplet_counts_to_dataframe(counts):
"""Convert a dictionary of counts, as returned by colorful_triplet_count, into a dataframe"""
colors, motif, index, count = [], [], [], []
for k in counts.keys():
k_counts = counts[k]
colors += [k] * len(k_counts)
count += list(k_counts)
... | daa97d5ef9e89ba7216a27024bcf2761f80780a9 | 3,605,228 |
def _partition(sequence, size, count):
"""Partition sequence into count subsequences of size
length, and a remainder.
Return (partitions, remainder), where partitions is a sequence of
count subsequences of cardinality count, and
apply(append, partitions) + remainder == sequence."""
par... | e33e7eaa35e3c57f0decda50e863686f529d5afa | 3,605,229 |
def get_style_sheet(
bg: str = "", bg_lighter: str = "", text: str = "", text_button: str = ""
) -> str:
"""
Returns a string representing the style sheet.
Usage: get_style_sheet(True) for dark mode or get_style_sheet(False) for light mode
"""
return f"""QWidget {{
background: {bg}... | 1f760e240de493a34e4148f69ad64dc307b6dc99 | 3,605,230 |
import re
def parse_docket_number(docket_number):
""" Parse a Common Pleas docket number into its components.
A docket number has the form "CP-46-CR-1234567-2019"
This method takes a docket number as a string and
returns a dictionary with the different parts as keys
"""
patt = re.compile(
... | 8f9af7709f881cc82bb7d22b420a5361e085de70 | 3,605,231 |
import random
import functools
def get_symbolic_alchemy_level(
level_name, observe_used=True, end_trial_action=False,
num_trials=10, num_stones_per_trial=3, num_potions_per_trial=12, seed=None,
reward_weights=None, max_steps_per_trial=DEFAULT_MAX_STEPS_PER_TRIAL,
see_chemistries=None, generate_events=... | 7fe520d63b512d3779da4db49e090a988cf848e5 | 3,605,232 |
def make_div(unit: str, length: int = 24, start: str = '', end: str = '', literal_unit=False) -> str:
"""
Generates and returns a custom divider
:param unit: str containing a repeating unit
:param length: The maximum length that will not be exceeded (default: 24)
:param start: optional starting str... | d628123e807231cab2b1a96e907aa9bd97537974 | 3,605,233 |
def thread(n_workers):
""" Decorator to execute a function in multiple threads.
Example:
.. doctest::
>>> import lox
>>>
>>> @lox.thread(4) # Will operate with a maximum of 4 threads
... def foo(x,y):
... return x*y
>>> foo(3,4)
12
>>> f... | e45a32a3191ea91f809b6ecfdd9bb6efe321eb2f | 3,605,234 |
from queue import PriorityQueue
from collections import defaultdict
from typing import List
def _assign(
datapoints: List,
annotators: List,
max_per_annotator: int,
max_per_dp: int,
blacklist_fn=None,
):
"""
Args:
datapoints: A list of data points to assign to each annotator.
... | 4eeefc5cc9bf70e35b396ab718228faac00e64c0 | 3,605,235 |
def correct_image_illumination(im, illum, stretch_quantile=0, mask=None):
"""Divide input image pointwise by the illumination field.
Parameters
----------
im : np.ndarray of float
The input image.
illum : np.ndarray of float, same shape as `im`
The illumination field.
stretch_qu... | 40c5b165d6e63a4fa5ae872bb39b2ef1476de1d1 | 3,605,236 |
def suffixes(word):
"""Returns the list of propper suffixes of a word
:param word: the word
:type word: str
:rtype: list
.. versionadded: 0.9.8"""
return [word[i:] for i in range(1, len(word))] | 551ea4d612a6c9f0ffe432701e3bde2c80899d85 | 3,605,237 |
import re
def ValidateAndParsePemChain(pem_chain):
"""Validates and parses a pem_chain string into a list of certs.
Args:
pem_chain: The string represting the pem_chain.
Returns:
A list of the certificates that make up the chain, in the same order
as the input.
Raises:
exceptions.InvalidArg... | 1a81be58a804280f080f890be49dfc59c3725cfe | 3,605,238 |
def tensormol_acsf(xyzs, Zs, elements, element_pairs, radial_cutoff, angular_cutoff,
radial_rs, angular_rs, theta_s, zeta, eta):
"""
This function uses the tensormol atom centred symmetry functions.
:param xyzs: tensor of shape (n_samples, n_atoms, 3)
:param Zs: tensor of sha... | 89a32d49264b7e5fbfb151fc9c9a3cb83dd1679c | 3,605,239 |
def delete_task(id):
"""Delete a task by its ID"""
TaskPersistence.delete(id)
return {'success': True, 'message': 'Task has been deleted'} | 65788e2d822ef9d150cbcae870d1c147205ca509 | 3,605,240 |
def get_morphological_patch(dimension, shape):
"""
:param dimension: dimension of the image (NOT the shape).
:param shape: circle or square.
:return: morphological patch as ndimage
"""
if shape == 'circle':
morpho_patch = ndimage.generate_binary_structure(dimension, 1)
elif shape == ... | 50d6c2c366190a4b3d3a808053080bcb72a7a6a7 | 3,605,241 |
def get_preflight_headers(*allowed_methods, **options):
"""
gets all headers to set in response for cors preflight requests.
it returns None if cors is not enabled or request's origin is not valid.
:param str allowed_methods: all allowed http methods.
:keyword bool enabled: specifies that cors he... | 576dad68d523e159d665219a072a222e387ef8fd | 3,605,242 |
def build_url(param_dict):
"""
Builds the URL needed to query [University of Wyoming, College of Engineering, Department of Atmospheric Science's website](http://weather.uwyo.edu/upperair/sounding.html) to get the proper sounding data.
Parameters
----------
param_dict : dict
A dictionar... | 77825ae917650d1b832333920b6363d4dac7c36b | 3,605,243 |
def get_signer(salt="newsletter_subscription"):
"""
Returns the signer instance used to sign and unsign the registration
link tokens
"""
return signing.Signer(salt=salt) | a8f16ceeb48a57b75c171881555dc85497c9f0ee | 3,605,244 |
def _fast_rcnn_box_loss(box_outputs, box_targets, class_targets, normalizer=1.0, delta=1.):
"""Computes box regression loss."""
# delta is typically around the mean value of regression target.
# for instances, the regression targets of 512x512 input with 6 anchors on
# P2-P6 pyramid is about [0.1, 0.1, ... | 97cb886e0aa248798c6fa45cda95f1b096cb690a | 3,605,245 |
def do_mprofile(func):
"""Wrapper that logs memory before and after a wrapped function call."""
@wraps(func)
def decorated_func(*args, **kwargs):
name = func.__name__ if hasattr(
func, '__name__') else func.__class__.__name__
mem_info_before = memory_info()
memory_logger... | 506aa8cfab7f203a1bd6dc4e937d8cbd24de739a | 3,605,246 |
import os
import yaml
import logging
import re
def parse_config(
filepath: str,
force_log_debug: bool = False,
) -> Configuration:
"""Parse a config file
Return a tuple of an AppConfig object and a Logger
"""
filepath = os.path.abspath(filepath)
if not os.path.isfile(filepath):
ra... | c694b907d57edb61168b6fcaaff1571d9a947a96 | 3,605,247 |
def smooth(values, factor):
"""smooth non zero values (by factor) towards 0th element."""
new_values = [0] * len(values)
for i in reversed(range(len(values))):
if values[i] != 0:
smoothed_value = values[i]
j = 0
while True:
if i-j < 0: break
new_values[i-j] += smoothed_value
... | 055c4bbe5bd1e696c69ad1ff14beb72b4abbdd11 | 3,605,248 |
from typing import Optional
from typing import List
def get_metrics(ticker: str) -> Optional[List[_Metric]]:
"""Get core metrics for ticker"""
data = sentipy.parsed(ticker)
return _contextualise_metrics(data, ticker, core_metrics) | 64398664dc04cb4c140ba6744af43efb50d4d110 | 3,605,249 |
def apis_index_doc_view(request):
"""
Show a list of available APIs
"""
# Create a voter_device_id and voter in the database if one doesn't exist yet
results = voter_setup(request)
voter_api_device_id = results['voter_api_device_id']
store_new_voter_api_device_id_in_cookie = results['store_n... | 85d30e2dcf3efc0cd7392031879dd721b58b98f3 | 3,605,250 |
from typing import cast
def ss_projects(subject: State, query: Query) -> State:
"""Split a list-like mob by release format (album/single)"""
if not query:
query = subject.mob
api = subject.api
query_mob = ss_open(subject, query).mob
print(' NOTE: "projects" may take a while')
tracks... | 4b83bb578311c40bf122bc41343b830d7825402a | 3,605,251 |
def in_month(ref_date):
""" which month contains a reference date
:param ref_date: mx.DateTime reference date
:rtype: range_string e.g. 2007-M12
"""
return "%4d-M%02d" % (ref_date.year, ref_date.mon) | fe8126529521565e35f2012e359d7a9c57b773d1 | 3,605,252 |
def _precipitable_water(ea, pair):
"""Precipitable water in the atmosphere (Eq. D.3)
Parameters
----------
ea : ee.Image
Vapor pressure [kPa].
pair : ee.Image or ee.Number
Air pressure [kPa].
Returns
-------
ee.Image or ee.Number
Precipitable water [mm].
N... | a56b3948167fb22bb49b6f84bd3980a2666dd345 | 3,605,253 |
from rest_framework.generics import GenericAPIView
def api_view_with_serializer(http_method_names=None, input_serializer=None, serializer=None, validation=True):
"""
Décorateur permettant de créer une APIView à partir d'une fonction suivant la structure d'un serializer
Elle remplace le décorateur @api_vie... | 7d26a68922643ebf1f07ddb07da329a3e23d52eb | 3,605,254 |
def euler3122PRV(e):
"""
euler3122PRV(E)
Q = euler3122PRV(E) translates the (3-1-2) euler
angle vector E into the principal rotation vector Q.
"""
return EP2PRV(euler3122EP(e)) | 4b8b64cc73683512e9f4f0fe3194e0af28bc80b3 | 3,605,255 |
import numpy
def smooth(data,N=10,step=1):
"""
Smooth sequence data using a moving window of width N. Returns a
list of tuples, <i, mu, stderr>, where i is the index of the last
element of in the moving window, mu is the average of the window,
and stderr is the standard error of the values in the... | 3afbf9652d729de945b983dea756188cc410dbb1 | 3,605,256 |
import unittest
import sys
def _MonkeyPatchTestResultForUnexpectedPasses():
"""Workaround for <http://bugs.python.org/issue20165>."""
# pylint: disable=g-doc-return-or-yield,g-doc-args,g-wrong-blank-lines
def wasSuccessful(self):
"""Tells whether or not this result was a success.
Any unexpected pass ... | 0ebef5be0a3afe4d117431d1685c0f6af4f40472 | 3,605,257 |
def get_files_to_check():
"""
:return: files to be checked string
"""
files = current_app.config.get('PYLINT_SETTINGS').get('include')
if not files:
abort(400, 'MISSING PYLINT_SETTINGS.include value')
try:
return ' '.join(files)
except TypeError:
abort(400, 'PYLINT_SE... | 6b0d502cc38752ad588e7d08ef0479f894c2ab1f | 3,605,258 |
from datetime import datetime
import requests
import json
def env_sensor(sample):
"""Query environmental sensor data"""
global env_sensor_response
global env_sensor_query_interval
global env_sensor_last_request
if env_sensor_response == '' or datetime.now() - env_sensor_last_request > env_sensor_... | f925f5c2c1b2844356e85bba7eb8e4332559097b | 3,605,259 |
import logging
import tqdm
def parse_dbcan_output(overview_path, hotpep_file, fasta_file):
"""Parse the data in the 'overview.txt' files from dbCAN.
The 'overview.txt' file contains the CAZyme predicion data from HMMER, Hotpep and DIAMOND.
A dbCAN consensus result is retrieved by finding predictions that... | 6113912c0810e6abf647bee1ffa21a0e30f91845 | 3,605,260 |
def get_supported_server_info(mail_address, protocol):
"""Use user address to get server address and port."""
provider = mail_address.split('@')[1]
if provider in supported_server:
server_info = supported_server[provider]
if protocol in server_info:
return server_info[protocol]
... | aa67535c5232ca980a8b386afa6244496f57d752 | 3,605,261 |
def str2tuple(string: str):
"""Construct the tuple data from string for SecondQuantizedOp."""
return (string, 1) | f9b8fe56bf54d27c9aee6c7a3ec3ab797b08fcd0 | 3,605,262 |
def interpolation(points,
queries,
feat,
points_row_splits,
queries_row_splits,
k=3):
"""Interpolation of features with nearest neighbours.
Args:
points: Input pointcloud (m, 3).
queries: Queries for Knn (... | bde1dc11369fc1111d846ec6aa32fc0b8a9fb9e1 | 3,605,263 |
def running_covariance_init(shape: 'IntTensor',
dtype: 'DTypeNest') -> 'RunningCovarianceState':
"""Initializes the `RunningCovarianceState`.
Args:
shape: Shape of the computed mean.
dtype: DType of the computed statistics.
Returns:
state: `RunningCovarianceState`.
"""
... | fc3858a41e1dcd39c2bef27fc37e0a96b36e1e6a | 3,605,264 |
def integrate_up_to_thr(state, ders, thr, dt=0.005):
"""integrates state with derivative for up to x = thr
:param state: state of the variables
:param ders: derivative functions
:param thr: threshold
:param dt: time step (default 0.005)
:return: state at threshold crossing"""
xh = state[0]
while((state[0] > t... | 3559b2168bfbb2a3818dbe87837a463822b80a09 | 3,605,265 |
def engin(parameters_ex,parameters_in,k,name_file,test1=False):
"""
run the fitting
:param parameters_ex:
:param parameters_in:
:param k:
:param name_file:
:return:
"""
parameters_ex['b']=6
data = np.load(name_file, encoding = 'latin1',allow_pickle=True)
shift_time = 0
ma... | f0565ddd5df9bb827b48dcbf8ca050a831b8a026 | 3,605,266 |
def _encode(values, *, uniques, check_unknown=True):
"""Helper function to encode values into [0, n_uniques - 1].
Uses pure python method for object dtype, and numpy method for
all other dtypes.
The numpy method has the limitation that the `uniques` need to
be sorted. Importantly, this is not check... | 1bba77ef713b9a07e543165cb1e9179c560ff225 | 3,605,267 |
def adjust_mye_age(mye):
"""
Makes mid-year estimate/snpp data conform with census age categories:
- subtract 100 from age (so that "1" means under 1)
- aggregate 86,87,88,89,90,91 into 86 (meaning 85+)
"""
# keep track of some totals
pop = mye.OBS_VALUE.sum()
pop_m = mye[mye.GENDER == 1].OBS_VA... | a500ee483fb94950d95e4874ce3a183db332ccf5 | 3,605,268 |
from typing import List
def check_validation_config(
default_params: List, local_params: List
) -> ValidationConfig:
"""
Compare the passed parameter values of a validation function to its
default parameter values.
"""
custom = False
for kw in default_params:
if not (default_params... | eda66672b7d1d06d53e586e310f3ee24241af16a | 3,605,269 |
def binning(features, n_bins, strategy, encode, feature_names):
"""
Returns binned features and the corresponding labels for each bin
'n_bins' can either be an integer or a list/numpy array of n integers (different number of bins for n features)
'strategy' and 'encode' are inputs for Scikit-learns KBins... | 295ccfb20d53002b15360593ef6ff9653db30d78 | 3,605,270 |
def to_grid(videos, size):
"""
Convert videos to a size x size grid video
:param np.ndarray video: video (dim=5, axis=(video_len, batchsize, channel, height, width))
:param int size: size of one side of the grid
"""
t, bs, c, h, w = videos.shape
# make (size x size) grid
if bs < s... | c8ea4146d56283c17d19f988bb5ea77f426407d9 | 3,605,271 |
from typing import List
from typing import Tuple
import re
def dexpand_string(string: str, to_replace: List[Tuple[str, str]]) -> str:
"""
inverse operation of expand_string
:param string: output of expand_string
:param to_replace: the same variable passed to expand_string
:return:
"""
# ... | 6b753bf8c8526092f89185bf136f554968d3f312 | 3,605,272 |
def make_gradient_function(mixture_obj, gradient_type, unpacker, setter):
""" chooses gradient among different approximations """
if gradient_type == "standard":
mixture_obj_grad = grad(mixture_obj)
elif gradient_type == "score_mean":
print "Scoring the mean with the current variance!!!"
... | 96650218f87ba12d069060796543d7a57c5a846f | 3,605,273 |
def _reassemble(obs_settings, num_bricks, randomize_initial_order,
randomize_desired_order):
"""Configure and instantiate a `Reassemble` task.
Args:
obs_settings: `observations.ObservationSettings` instance.
num_bricks: The total number of bricks; must be between 2 and 6.
randomize_init... | a007ce91f4816406bd8f1a8ee308db2506cf73d1 | 3,605,274 |
from typing import OrderedDict
import sys
def read_weights(weight_file,chrom,pos,ref,alt,coord,ea,weight,vcf_chrom):
"""
Read file with weights into dictionary and regions files for tabix.
"""
weight_dict=OrderedDict()
command=open_zip(weight_file)
counter=0
with command as f:
for ... | cb0017dc0ddbb271d48fb1d8a9f4c07f3b5b7924 | 3,605,275 |
import argparse
def set_args():
"""设置训练模型所需参数"""
parser = argparse.ArgumentParser()
parser.add_argument('--device', default='0', type=str, help='设置训练或测试时使用的显卡')
parser.add_argument('--config_path', default='./config/config.json', type=str, help='模型参数配置信息')
parser.add_argument('--vocab_path', defau... | cea63034d513b8717236d68c1270147d6ed1cdff | 3,605,276 |
def get_list_types(list_type=['organisation_type_id']):
"""Method to get all organisation types for js."""
try:
org_units = SetupList.objects.filter(is_void=False)
vals = []
orgs = {}
orgs_dict = {}
cnt = 0
for org_unit in org_units:
field_name = org_u... | 8b371bae35cd8f11d8e6b44d60ebaadc03a7475e | 3,605,277 |
def YScaleFun(center):
"""
function that returns a scaling vector to scale y data to same range as x data
"""
# center gets ignored in this case
return N.array((5e7, 1), N.float) | 3314618c40db6b7954b246234aece384654a8539 | 3,605,278 |
def mesh_muvw_fz(quad_int, cryst_ptgrp, sig_type, *args):
"""
For given integer quadruples, the set belonging to the corresponding
fundamental zone are separated out and retruned.
Parameters
----------------
quad_int: numpy.array
Integer quadruples
cryst_ptgrp: str
Proper po... | f59ed76aabe94330ca8c3662a37c34cd66d7549a | 3,605,279 |
def atcab_aes_cmac_finish(ctx, cmac, size):
"""
Finish a CMAC operation returning the CMAC value.
Args:
ctx AES-128 CMAC context.
cmac CMAC is returned here.
cmac_size Size of CMAC requested in bytes (max 16 bytes).
Returns:
Stat... | cbc77488bc204e5b6c9b0cf35d35ae376edf4f74 | 3,605,280 |
def neg2pos(index, shape):
"""Make a negative index (that counts from then end) positive
.. warning:: this function should be called only once -- always on
user inputs -- otherwise we risk transforming back stuff that
should be kept negative.
Ex: neg2pos(-5, 3) = -2 ... | f863230e20af21cd6c69e8ac8d91757e692b6803 | 3,605,281 |
from typing import List
from typing import Tuple
from typing import Type
def compare_detect_inference_frame(
df: pd.DataFrame, typeset: VisionsTypeset
) -> List[Tuple[str, Type[VisionsBaseType], Type[VisionsBaseType]]]:
"""Compare the types given by inference on the base graph and the relational graph
Ar... | d43c1e1747ec4be8136e87ebaf9edf9e2346b2e3 | 3,605,282 |
def setup_experiment(lbann):
"""Construct LBANN experiment.
Args:
lbann (module): Module for LBANN Python frontend
"""
# Setup the training algorithm
SGD = lbann.BatchedIterativeOptimizer
TSE = lbann.TruncationSelectionExchange
metalearning = TSE(
metric_strategies={'rando... | 8a5581395f9851e6de6fa4a0477ef20214d5d3ea | 3,605,283 |
def pointwiseFold(f,x,n,listOfLists):
"""This function is a generalization of the fold function
to take more than one list.
Keyword arguments:
f -- the binary function used to accumulate some value
x -- the initial value for all the values
n -- the common length of the lists
... | e6c8cd5565b5554631aa55c5b42c9c50a11256e7 | 3,605,284 |
import calendar
def update_pie(year, ser):
"""
Update the pie plot using dailyStats, as
function of selected year in year-slider
In case of None use Current year as default year
"""
year = year if year is not None else dyear
dailyStats = pd.read_json(ser)
min_month = dailyStats.index.m... | dcdd28754c6b77cbad266a578c4e71b92ba08bc7 | 3,605,285 |
import os
def test_mindir_export_split():
"""
Feature: MindIR Export model is exceed TOTAL_SAVE(1G but mocked as 0)
Description: MindIR Export model is exceed TOTAL_SAVE should be split save as model file and data file
Expectation: No exception.
"""
ms.train.serialization.TOTAL_SAVE = 0
c... | fcf29b35057d41efe4e924ab762ac6e3bbde97ec | 3,605,286 |
import numpy
def _n_gaussians(x, N, *params):
"""Sum of N Gaussian functions plus an offset from zero
Parameters
----------
x : float
values to calculate Gaussians function at
N : int
number of Gaussians
params : floats
3*N + 1 parameters corresp... | afa3683316f60463a8320457754680e3da52714c | 3,605,287 |
def posts_update(post_id):
"""Handle form submission for updating an existing post"""
post = Post.query.get_or_404(post_id)
post.title = request.form['title']
post.content = request.form['content']
db.session.add(post)
db.session.commit()
flash(f"Post '{post.title}' edited.")
return r... | ef14c4712f1a1810bea4503358f0f93623cf0b14 | 3,605,288 |
def get_azimuth_value(label):
"""
Returns the angle in degrees represented by a azimuth label int.
Parameters
----------
label: int
Azimuth label.
"""
_check_is_integral('azimuth', label)
if label == -1:
return None
else:
if (label % 2) != 0 or label < 0 or la... | d33ff558b23b3dc0cc9ce411686403e4519ac59c | 3,605,289 |
def _unpack_topk(topk, lp, hists, xok=None, sub_stts=None, attn=None):
"""unpack the decoder output"""
beam, _ = topk.size()
topks = [t for t in topk]
lps = [l for l in lp]
k_hists = [(hists[0][:, i, :], hists[1][:, i, :], hists[2][i, :])
for i in range(beam)]
if xok is not None:
... | db9d93ef8b40390733034ce10ef7228bc4d23fbf | 3,605,290 |
def pack_bits( longbits ):
"""Crunch a 64-bit int (8 bool bytes) into a bitfield."""
byte = longbits & (0x0101010101010101)
byte = (byte | (byte>>7)) & (0x0003000300030003)
byte = (byte | (byte>>14)) & (0x0000000f0000000f)
byte = (byte | (byte>>28)) & (0x00000000000000ff)
return byte | 78fdf9828b4f98c9bc44233ef5f95244eefb24fc | 3,605,291 |
from pathlib import Path
def fullpath(path=""):
""" Path: Expand relative paths and tildes. """
return Path.cwd() / Path(path).expanduser() | e7b7d1caa67a2a9988035713ec18347b5581406e | 3,605,292 |
def get_engine_latest_version(request):
"""
Return a string with if new versions have been released.
Return 'None' if the version is not available
"""
return HttpResponse(engine.check_obsolete_version()) | 4d4e1d864ec8e9a46867820959a98dbdcdb19a1a | 3,605,293 |
import os
from datetime import datetime
def get_video_end_time(video_file):
"""Get video end time in seconds"""
if not os.path.isfile(video_file):
print(f"Error, video file {video_file} does not exist")
return None
try:
time_string = FFProbe(video_file).video[0].creation_time
... | ad071a70a873df63d3fe4f983226ea5bda995fdd | 3,605,294 |
def scaffold_split(data,
test_size,
balanced = True,
random_state = 0):
"""
Splits a :class:`~chemprop.data.MoleculeDataset` by scaffold so that no molecules sharing a scaffold are in different splits.
:param data
:param test_size: the proportions... | 26ec190d4ac251883be014fb4b7d71cbf071a5a3 | 3,605,295 |
import io
def read_file(path):
"""Returns all the lines of a file at path as a List"""
file_lines = []
with io.open(path, mode="rt", encoding="utf-8") as the_file:
file_lines = the_file.readlines()
return file_lines | 8e220e0b90ded168a1d1d8d37b7451b7796b1ed5 | 3,605,296 |
def scale_by_std(df, demean=False):
"""
Align the columns of the df to the last value.
"""
df = df.copy()
if demean:
df -= df.dropna().mean()
scale = np.abs(df.dropna().std())
return df / scale | ee6ab8359e0bf089d2f6ea40601299665024570c | 3,605,297 |
def count_intersections(lines, *, with_diagonals):
"""
>>> lines = [(0,9,5,9), (8,0,0,8), (9,4,3,4), (2,2,2,1), (7,0,7,4), (6,4,2,0), (0,9,2,9), (3,4,1,4), (0,0,8,8), (5,5,8,2)]
>>> count_intersections(lines, with_diagonals=False)
5
>>> count_intersections(lines, with_diagonals=True)
12
"""
... | c9a1d13e64cca408b76d5c1271be3afca0d87dcd | 3,605,298 |
def edit_product(request, product_id):
""" Edit a product in the store """
if not request.user.is_superuser:
messages.error(request, 'Sorry, only store owners can do that.')
return redirect(reverse('home'))
product = get_object_or_404(Product, pk=product_id)
if request.method == 'POST':... | 17578c3210d9f84d1746d8a55cee1efcf8755fbb | 3,605,299 |
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