Resume SynthData0523 main/c19 batch 7
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- .gitattributes +42 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/models/noise_schedule.py +157 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/models/unified_ctime_diffusion.py +597 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/modules/main_modules.py +167 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/modules/transformer.py +258 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/all_results.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/all_results.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/samples.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/shapes.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/trends.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/samples.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/shapes.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/trends.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/trainer.py +657 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/utils_train.py +193 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_train.py +37 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/gen_20260512_235639.log +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/input_snapshot.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/models_tabdiff/trained.pt +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/public_gate/normalized_schema_snapshot.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/public_gate/public_gate_report.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/public_gate/staged_input_manifest.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/run_config.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/runtime_result.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/staged_features.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/test.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/train.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/val.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/tabdiff/adapter_report.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/tabdiff/adapter_transforms_applied.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/tabdiff/model_input_manifest.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabdiff-c19-32759-20260512_235639.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabdiff_train_meta.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_cat_test.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_cat_train.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_cat_val.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_num_test.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_num_train.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_num_val.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/info.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/real.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/staged_features.json +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/test.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/train.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/val.csv +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/y_test.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/y_train.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/y_val.npy +3 -0
- SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/train_20260512_231308.log +3 -0
- SynthData0523/main/c19/tabpfgen/tabpfgen-c19-20260422_200215/_tabpfgen_generate.py +87 -0
.gitattributes
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import abc
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import torch
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import torch.nn as nn
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class Noise(abc.ABC, nn.Module):
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"""
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Baseline forward method to get the total + rate of noise at a timestep
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"""
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def forward(self, t):
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# Assume time goes from 0 to 1
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return self.total_noise(t), self.rate_noise(t)
|
| 14 |
+
|
| 15 |
+
@abc.abstractmethod
|
| 16 |
+
def total_noise(self, t):
|
| 17 |
+
"""
|
| 18 |
+
Total noise ie \int_0^t g(t) dt + g(0)
|
| 19 |
+
"""
|
| 20 |
+
pass
|
| 21 |
+
|
| 22 |
+
|
| 23 |
+
class LogLinearNoise(Noise):
|
| 24 |
+
"""Log Linear noise schedule.
|
| 25 |
+
|
| 26 |
+
"""
|
| 27 |
+
def __init__(self, eps_max=1e-3, eps_min=1e-5, **kwargs):
|
| 28 |
+
super().__init__()
|
| 29 |
+
self.eps_max = eps_max
|
| 30 |
+
self.eps_min = eps_min
|
| 31 |
+
self.sigma_max = self.total_noise(torch.tensor(1.0))
|
| 32 |
+
self.sigma_min = self.total_noise(torch.tensor(0.0))
|
| 33 |
+
|
| 34 |
+
def k(self):
|
| 35 |
+
return torch.tensor(1)
|
| 36 |
+
|
| 37 |
+
def rate_noise(self, t):
|
| 38 |
+
return (1 - self.eps_max - self.eps_min) / (1 - ((1 - self.eps_max - self.eps_min) * t + self.eps_min))
|
| 39 |
+
|
| 40 |
+
def total_noise(self, t):
|
| 41 |
+
"""
|
| 42 |
+
sigma_min=-log(1-eps_min), when t=0
|
| 43 |
+
sigma_max=-log(eps_max), when t=1
|
| 44 |
+
"""
|
| 45 |
+
return -torch.log1p(-((1 - self.eps_max - self.eps_min) * t + self.eps_min))
|
| 46 |
+
|
| 47 |
+
class PowerMeanNoise(Noise):
|
| 48 |
+
"""The noise schedule using the power mean interpolation function.
|
| 49 |
+
|
| 50 |
+
This is the schedule used in EDM
|
| 51 |
+
"""
|
| 52 |
+
def __init__(self, sigma_min=0.002, sigma_max=80, rho=7, **kwargs):
|
| 53 |
+
super().__init__()
|
| 54 |
+
self.sigma_min = sigma_min
|
| 55 |
+
self.sigma_max = sigma_max
|
| 56 |
+
self.raw_rho = rho
|
| 57 |
+
|
| 58 |
+
def rho(self):
|
| 59 |
+
# Return the softplus-transformed rho for all num_numerical values
|
| 60 |
+
return torch.tensor(self.raw_rho)
|
| 61 |
+
|
| 62 |
+
def total_noise(self, t):
|
| 63 |
+
sigma = (self.sigma_min ** (1/self.rho()) + t * (
|
| 64 |
+
self.sigma_max ** (1/self.rho()) - self.sigma_min ** (1/self.rho()))).pow(self.rho())
|
| 65 |
+
return sigma
|
| 66 |
+
|
| 67 |
+
def inverse_to_t(self, sigma):
|
| 68 |
+
t = (sigma.pow(1/self.rho()) - self.sigma_min ** (1/self.rho())) / (self.sigma_max ** (1/self.rho()) - self.sigma_min ** (1/self.rho()))
|
| 69 |
+
return t
|
| 70 |
+
|
| 71 |
+
|
| 72 |
+
class PowerMeanNoise_PerColumn(nn.Module):
|
| 73 |
+
|
| 74 |
+
def __init__(self, num_numerical, sigma_min=0.002, sigma_max=80, rho_init=1, rho_offset=2, **kwargs):
|
| 75 |
+
super().__init__()
|
| 76 |
+
self.sigma_min = sigma_min
|
| 77 |
+
self.sigma_max = sigma_max
|
| 78 |
+
self.num_numerical = num_numerical
|
| 79 |
+
self.rho_offset = rho_offset
|
| 80 |
+
self.rho_raw = nn.Parameter(torch.tensor([rho_init] * self.num_numerical, dtype=torch.float32))
|
| 81 |
+
|
| 82 |
+
def rho(self):
|
| 83 |
+
# Return the softplus-transformed rho for all num_numerical values
|
| 84 |
+
return nn.functional.softplus(self.rho_raw) + self.rho_offset
|
| 85 |
+
|
| 86 |
+
def total_noise(self, t):
|
| 87 |
+
"""
|
| 88 |
+
Compute total noise for each t in the batch for all num_numerical rhos.
|
| 89 |
+
t: [batch_size]
|
| 90 |
+
Returns: [batch_size, num_numerical]
|
| 91 |
+
"""
|
| 92 |
+
batch_size = t.size(0)
|
| 93 |
+
|
| 94 |
+
rho = self.rho()
|
| 95 |
+
|
| 96 |
+
sigma_min_pow = self.sigma_min ** (1 / rho) # Shape: [num_numerical]
|
| 97 |
+
sigma_max_pow = self.sigma_max ** (1 / rho) # Shape: [num_numerical]
|
| 98 |
+
|
| 99 |
+
sigma = (sigma_min_pow + t * (sigma_max_pow - sigma_min_pow)).pow(rho) # Shape: [batch_size, num_numerical]
|
| 100 |
+
|
| 101 |
+
return sigma
|
| 102 |
+
|
| 103 |
+
def rate_noise(self, t):
|
| 104 |
+
return None
|
| 105 |
+
|
| 106 |
+
def inverse_to_t(self, sigma):
|
| 107 |
+
"""
|
| 108 |
+
Inverse function to map sigma back to t, with proper broadcasting support.
|
| 109 |
+
sigma: [batch_size, num_numerical] or [batch_size, 1]
|
| 110 |
+
Returns: t: [batch_size, num_numerical]
|
| 111 |
+
"""
|
| 112 |
+
rho = self.rho()
|
| 113 |
+
|
| 114 |
+
sigma_min_pow = self.sigma_min ** (1 / rho) # Shape: [num_numerical]
|
| 115 |
+
sigma_max_pow = self.sigma_max ** (1 / rho) # Shape: [num_numerical]
|
| 116 |
+
|
| 117 |
+
# To enable broadcasting between sigma and the per-column rho values, expand rho where needed.
|
| 118 |
+
t = (sigma.pow(1 / rho) - sigma_min_pow) / (sigma_max_pow - sigma_min_pow)
|
| 119 |
+
|
| 120 |
+
return t
|
| 121 |
+
|
| 122 |
+
|
| 123 |
+
class LogLinearNoise_PerColumn(nn.Module):
|
| 124 |
+
|
| 125 |
+
def __init__(self, num_categories, eps_max=1e-3, eps_min=1e-5, k_init=-6, k_offset=1, **kwargs):
|
| 126 |
+
|
| 127 |
+
super().__init__()
|
| 128 |
+
self.eps_max = eps_max
|
| 129 |
+
self.eps_min = eps_min
|
| 130 |
+
# Use softplus to ensure k is positive
|
| 131 |
+
self.num_categories = num_categories
|
| 132 |
+
self.k_offset = k_offset
|
| 133 |
+
self.k_raw = nn.Parameter(torch.tensor([k_init] * self.num_categories, dtype=torch.float32))
|
| 134 |
+
|
| 135 |
+
def k(self):
|
| 136 |
+
return torch.nn.functional.softplus(self.k_raw) + self.k_offset
|
| 137 |
+
|
| 138 |
+
def rate_noise(self, t, noise_fn=None):
|
| 139 |
+
"""
|
| 140 |
+
Compute rate noise for all categories with broadcasting.
|
| 141 |
+
t: [batch_size]
|
| 142 |
+
Returns: [batch_size, num_categories]
|
| 143 |
+
"""
|
| 144 |
+
k = self.k() # Shape: [num_categories]
|
| 145 |
+
|
| 146 |
+
numerator = (1 - self.eps_max - self.eps_min) * k * t.pow(k - 1)
|
| 147 |
+
denominator = 1 - ((1 - self.eps_max - self.eps_min) * t.pow(k) + self.eps_min)
|
| 148 |
+
rate = numerator / denominator # Shape: [batch_size, num_categories]
|
| 149 |
+
|
| 150 |
+
return rate
|
| 151 |
+
|
| 152 |
+
def total_noise(self, t, noise_fn=None):
|
| 153 |
+
k = self.k() # Shape: [num_categories]
|
| 154 |
+
|
| 155 |
+
total_noise = -torch.log1p(-((1 - self.eps_max - self.eps_min) * t.pow(k) + self.eps_min))
|
| 156 |
+
|
| 157 |
+
return total_noise
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/models/unified_ctime_diffusion.py
ADDED
|
@@ -0,0 +1,597 @@
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|
| 1 |
+
import torch.nn.functional as F
|
| 2 |
+
import torch
|
| 3 |
+
import math
|
| 4 |
+
import numpy as np
|
| 5 |
+
from tabdiff.models.noise_schedule import *
|
| 6 |
+
from tqdm import tqdm
|
| 7 |
+
from itertools import chain
|
| 8 |
+
|
| 9 |
+
"""
|
| 10 |
+
“Our implementation of the continuous-time masked diffusion is inspired by https://arxiv.org/abs/2406.07524's implementation at [https://github.com/kuleshov-group/mdlm], with modifications to support data distributions that include categorical dimensions of different sizes.”
|
| 11 |
+
"""
|
| 12 |
+
|
| 13 |
+
S_churn= 1
|
| 14 |
+
S_min=0
|
| 15 |
+
S_max=float('inf')
|
| 16 |
+
S_noise=1
|
| 17 |
+
|
| 18 |
+
class UnifiedCtimeDiffusion(torch.nn.Module):
|
| 19 |
+
def __init__(
|
| 20 |
+
self,
|
| 21 |
+
num_classes: np.array,
|
| 22 |
+
num_numerical_features: int,
|
| 23 |
+
denoise_fn,
|
| 24 |
+
y_only_model,
|
| 25 |
+
num_timesteps=1000,
|
| 26 |
+
scheduler='power_mean',
|
| 27 |
+
cat_scheduler='log_linear',
|
| 28 |
+
noise_dist='uniform',
|
| 29 |
+
edm_params={},
|
| 30 |
+
noise_dist_params={},
|
| 31 |
+
noise_schedule_params={},
|
| 32 |
+
sampler_params={},
|
| 33 |
+
device=torch.device('cpu'),
|
| 34 |
+
**kwargs
|
| 35 |
+
):
|
| 36 |
+
|
| 37 |
+
super(UnifiedCtimeDiffusion, self).__init__()
|
| 38 |
+
|
| 39 |
+
self.num_numerical_features = num_numerical_features
|
| 40 |
+
self.num_classes = num_classes # it as a vector [K1, K2, ..., Km]
|
| 41 |
+
self.num_classes_expanded = torch.from_numpy(
|
| 42 |
+
np.concatenate([num_classes[i].repeat(num_classes[i]) for i in range(len(num_classes))])
|
| 43 |
+
).to(device) if len(num_classes)>0 else torch.tensor([]).to(device).int()
|
| 44 |
+
self.mask_index = torch.tensor(self.num_classes).long().to(device)
|
| 45 |
+
self.neg_infinity = -1000000.0
|
| 46 |
+
self.num_classes_w_mask = tuple(self.num_classes + 1)
|
| 47 |
+
|
| 48 |
+
offsets = np.cumsum(self.num_classes)
|
| 49 |
+
offsets = np.append([0], offsets)
|
| 50 |
+
self.slices_for_classes = []
|
| 51 |
+
for i in range(1, len(offsets)):
|
| 52 |
+
self.slices_for_classes.append(np.arange(offsets[i - 1], offsets[i]))
|
| 53 |
+
self.offsets = torch.from_numpy(offsets).to(device)
|
| 54 |
+
|
| 55 |
+
offsets = np.cumsum(self.num_classes) + np.arange(1, len(self.num_classes)+1)
|
| 56 |
+
offsets = np.append([0], offsets)
|
| 57 |
+
self.slices_for_classes_with_mask = []
|
| 58 |
+
for i in range(1, len(offsets)):
|
| 59 |
+
self.slices_for_classes_with_mask.append(np.arange(offsets[i - 1], offsets[i]))
|
| 60 |
+
|
| 61 |
+
self._denoise_fn = denoise_fn
|
| 62 |
+
self.y_only_model = y_only_model
|
| 63 |
+
self.num_timesteps = num_timesteps
|
| 64 |
+
self.scheduler = scheduler
|
| 65 |
+
self.cat_scheduler = cat_scheduler
|
| 66 |
+
self.noise_dist = noise_dist
|
| 67 |
+
self.edm_params = edm_params
|
| 68 |
+
self.noise_dist_params = noise_dist_params
|
| 69 |
+
self.sampler_params = sampler_params
|
| 70 |
+
if self.num_numerical_features == 0:
|
| 71 |
+
self.sampler_params['stochastic_sampler'] = False
|
| 72 |
+
self.sampler_params['second_order_correction'] = False
|
| 73 |
+
|
| 74 |
+
self.w_num = 0.0
|
| 75 |
+
self.w_cat = 0.0
|
| 76 |
+
self.num_mask_idx = []
|
| 77 |
+
self.cat_mask_idx = []
|
| 78 |
+
|
| 79 |
+
self.device = device
|
| 80 |
+
|
| 81 |
+
if self.scheduler == 'power_mean':
|
| 82 |
+
self.num_schedule = PowerMeanNoise(**noise_schedule_params)
|
| 83 |
+
elif self.scheduler == 'power_mean_per_column':
|
| 84 |
+
self.num_schedule = PowerMeanNoise_PerColumn(num_numerical = num_numerical_features, **noise_schedule_params)
|
| 85 |
+
else:
|
| 86 |
+
raise NotImplementedError(f"The noise schedule--{self.scheduler}-- is not implemented for contiuous data at CTIME ")
|
| 87 |
+
|
| 88 |
+
if self.cat_scheduler == 'log_linear':
|
| 89 |
+
self.cat_schedule = LogLinearNoise(**noise_schedule_params)
|
| 90 |
+
elif self.cat_scheduler == 'log_linear_per_column':
|
| 91 |
+
self.cat_schedule = LogLinearNoise_PerColumn(num_categories = len(num_classes), **noise_schedule_params)
|
| 92 |
+
else:
|
| 93 |
+
raise NotImplementedError(f"The noise schedule--{self.cat_scheduler}-- is not implemented for discrete data at CTIME ")
|
| 94 |
+
|
| 95 |
+
def mixed_loss(self, x):
|
| 96 |
+
b = x.shape[0]
|
| 97 |
+
device = x.device
|
| 98 |
+
|
| 99 |
+
x_num = x[:, :self.num_numerical_features]
|
| 100 |
+
x_cat = x[:, self.num_numerical_features:].long()
|
| 101 |
+
# Sample noise level
|
| 102 |
+
if self.noise_dist == "uniform_t":
|
| 103 |
+
t = torch.rand(b, device=device, dtype=x_num.dtype)
|
| 104 |
+
t = t[:, None]
|
| 105 |
+
sigma_num = self.num_schedule.total_noise(t)
|
| 106 |
+
sigma_cat = self.cat_schedule.total_noise(t)
|
| 107 |
+
dsigma_cat = self.cat_schedule.rate_noise(t)
|
| 108 |
+
else:
|
| 109 |
+
sigma_num = self.sample_ctime_noise(x)
|
| 110 |
+
t = self.num_schedule.inverse_to_t(sigma_num)
|
| 111 |
+
while torch.any((t < 0) + (t > 1)):
|
| 112 |
+
# restrict t to [0,1]
|
| 113 |
+
# this iterative approach is equivalent to sampling from a truncated version of the orignal noise distribution
|
| 114 |
+
invalid_idx = ((t < 0) + (t > 1)).nonzero().squeeze(-1)
|
| 115 |
+
sigma_num[invalid_idx] = self.sample_ctime_noise(x[:len(invalid_idx)])
|
| 116 |
+
t = self.num_schedule.inverse_to_t(sigma_num)
|
| 117 |
+
assert not torch.any((t < 0) + (t > 1))
|
| 118 |
+
sigma_cat = self.cat_schedule.total_noise(t)
|
| 119 |
+
# Convert sigma_cat to the corresponding alpha and move_chance
|
| 120 |
+
alpha = torch.exp(-sigma_cat)
|
| 121 |
+
move_chance = -torch.expm1(-sigma_cat) # torch.expm1 gives better numertical stability
|
| 122 |
+
|
| 123 |
+
# Continuous forward diff
|
| 124 |
+
x_num_t = x_num
|
| 125 |
+
if x_num.shape[1] > 0:
|
| 126 |
+
noise = torch.randn_like(x_num)
|
| 127 |
+
x_num_t = x_num + noise * sigma_num
|
| 128 |
+
|
| 129 |
+
# Discrete forward diff
|
| 130 |
+
x_cat_t = x_cat
|
| 131 |
+
x_cat_t_soft = x_cat # in the case where x_cat is empty, x_cat_t_soft will have the same shape as x_cat
|
| 132 |
+
if x_cat.shape[1] > 0:
|
| 133 |
+
is_learnable = self.cat_scheduler == 'log_linear_per_column'
|
| 134 |
+
strategy = 'soft'if is_learnable else 'hard'
|
| 135 |
+
x_cat_t, x_cat_t_soft = self.q_xt(x_cat, move_chance, strategy=strategy)
|
| 136 |
+
|
| 137 |
+
# Predict orignal data (distribution)
|
| 138 |
+
model_out_num, model_out_cat = self._denoise_fn(
|
| 139 |
+
x_num_t, x_cat_t_soft,
|
| 140 |
+
t.squeeze(), sigma=sigma_num
|
| 141 |
+
)
|
| 142 |
+
|
| 143 |
+
d_loss = torch.zeros((1,)).float()
|
| 144 |
+
c_loss = torch.zeros((1,)).float()
|
| 145 |
+
|
| 146 |
+
if x_num.shape[1] > 0:
|
| 147 |
+
c_loss = self._edm_loss(model_out_num, x_num, sigma_num)
|
| 148 |
+
if x_cat.shape[1] > 0:
|
| 149 |
+
logits = self._subs_parameterization(model_out_cat, x_cat_t) # log normalized probabilities, with the entry mask category being set to -inf
|
| 150 |
+
d_loss = self._absorbed_closs(logits, x_cat, sigma_cat, dsigma_cat)
|
| 151 |
+
|
| 152 |
+
return d_loss.mean(), c_loss.mean()
|
| 153 |
+
|
| 154 |
+
@torch.no_grad()
|
| 155 |
+
def sample(self, num_samples):
|
| 156 |
+
b = num_samples
|
| 157 |
+
device = self.device
|
| 158 |
+
dtype = torch.float32
|
| 159 |
+
|
| 160 |
+
# Create the chain of t
|
| 161 |
+
t = torch.linspace(0,1,self.num_timesteps, dtype=dtype, device=device) # times = 0.0,...,1.0
|
| 162 |
+
t = t[:, None]
|
| 163 |
+
|
| 164 |
+
# Compute the chains of sigma
|
| 165 |
+
sigma_num_cur = self.num_schedule.total_noise(t)
|
| 166 |
+
sigma_cat_cur = self.cat_schedule.total_noise(t)
|
| 167 |
+
sigma_num_next = torch.zeros_like(sigma_num_cur)
|
| 168 |
+
sigma_num_next[1:] = sigma_num_cur[0:-1]
|
| 169 |
+
sigma_cat_next = torch.zeros_like(sigma_cat_cur)
|
| 170 |
+
sigma_cat_next[1:] = sigma_cat_cur[0:-1]
|
| 171 |
+
|
| 172 |
+
# Prepare sigma_hat for stochastic sampling mode
|
| 173 |
+
if self.sampler_params['stochastic_sampler']:
|
| 174 |
+
gamma = min(S_churn / self.num_timesteps, np.sqrt(2) - 1) * (S_min <= sigma_num_cur) * (sigma_num_cur <= S_max)
|
| 175 |
+
sigma_num_hat = sigma_num_cur + gamma * sigma_num_cur
|
| 176 |
+
t_hat = self.num_schedule.inverse_to_t(sigma_num_hat)
|
| 177 |
+
t_hat = torch.min(t_hat, dim=-1, keepdim=True).values # take the samllest t_hat induced by sigma_num
|
| 178 |
+
zero_gamma = (gamma==0).any()
|
| 179 |
+
t_hat[zero_gamma] = t[zero_gamma]
|
| 180 |
+
out_of_bound = (t_hat > 1).squeeze()
|
| 181 |
+
sigma_num_hat[out_of_bound] = sigma_num_cur[out_of_bound]
|
| 182 |
+
t_hat[out_of_bound] = t[out_of_bound]
|
| 183 |
+
sigma_cat_hat = self.cat_schedule.total_noise(t_hat)
|
| 184 |
+
else:
|
| 185 |
+
t_hat = t
|
| 186 |
+
sigma_num_hat = sigma_num_cur
|
| 187 |
+
sigma_cat_hat = sigma_cat_cur
|
| 188 |
+
|
| 189 |
+
# Sample priors for the continuous dimensions
|
| 190 |
+
z_norm = torch.randn((b, self.num_numerical_features), device=device) * sigma_num_cur[-1]
|
| 191 |
+
|
| 192 |
+
# Sample priors for the discrete dimensions
|
| 193 |
+
has_cat = len(self.num_classes) > 0
|
| 194 |
+
z_cat = torch.zeros((b, 0), device=device).float() # the default values for categorical sample if the dataset has no categorical entry
|
| 195 |
+
if has_cat:
|
| 196 |
+
z_cat = self._sample_masked_prior(
|
| 197 |
+
b,
|
| 198 |
+
len(self.num_classes),
|
| 199 |
+
)
|
| 200 |
+
|
| 201 |
+
pbar = tqdm(reversed(range(0, self.num_timesteps)), total=self.num_timesteps)
|
| 202 |
+
pbar.set_description(f"Sampling Progress")
|
| 203 |
+
for i in pbar:
|
| 204 |
+
z_norm, z_cat, q_xs = self.edm_update(
|
| 205 |
+
z_norm, z_cat, i,
|
| 206 |
+
t[i], t[i-1] if i > 0 else None, t_hat[i],
|
| 207 |
+
sigma_num_cur[i], sigma_num_next[i], sigma_num_hat[i],
|
| 208 |
+
sigma_cat_cur[i], sigma_cat_next[i], sigma_cat_hat[i],
|
| 209 |
+
)
|
| 210 |
+
|
| 211 |
+
assert torch.all(z_cat < self.mask_index)
|
| 212 |
+
sample = torch.cat([z_norm, z_cat], dim=1).cpu()
|
| 213 |
+
return sample
|
| 214 |
+
|
| 215 |
+
def sample_all(self, num_samples, batch_size, keep_nan_samples=False):
|
| 216 |
+
b = batch_size
|
| 217 |
+
|
| 218 |
+
all_samples = []
|
| 219 |
+
num_generated = 0
|
| 220 |
+
while num_generated < num_samples:
|
| 221 |
+
print(f"Samples left to generate: {num_samples-num_generated}")
|
| 222 |
+
sample = self.sample(b)
|
| 223 |
+
mask_nan = torch.any(sample.isnan(), dim=1)
|
| 224 |
+
if keep_nan_samples:
|
| 225 |
+
# If the sample instances that contains Nan are decided to be kept, the row with Nan will be foreced to all zeros
|
| 226 |
+
sample = sample * (~mask_nan)[:, None]
|
| 227 |
+
else:
|
| 228 |
+
# Otherwise the instances with Nan will be eliminated
|
| 229 |
+
sample = sample[~mask_nan]
|
| 230 |
+
|
| 231 |
+
all_samples.append(sample)
|
| 232 |
+
num_generated += sample.shape[0]
|
| 233 |
+
|
| 234 |
+
x_gen = torch.cat(all_samples, dim=0)[:num_samples]
|
| 235 |
+
|
| 236 |
+
return x_gen
|
| 237 |
+
|
| 238 |
+
def q_xt(self, x, move_chance, strategy='hard'):
|
| 239 |
+
"""Computes the noisy sample xt.
|
| 240 |
+
|
| 241 |
+
Args:
|
| 242 |
+
x: int torch.Tensor with shape (batch_size,
|
| 243 |
+
diffusion_model_input_length), input.
|
| 244 |
+
move_chance: float torch.Tensor with shape (batch_size, 1).
|
| 245 |
+
"""
|
| 246 |
+
if strategy == 'hard':
|
| 247 |
+
move_indices = torch.rand(
|
| 248 |
+
* x.shape, device=x.device) < move_chance
|
| 249 |
+
xt = torch.where(move_indices, self.mask_index, x)
|
| 250 |
+
xt_soft = self.to_one_hot(xt).to(move_chance.dtype)
|
| 251 |
+
return xt, xt_soft
|
| 252 |
+
elif strategy == 'soft':
|
| 253 |
+
bs = x.shape[0]
|
| 254 |
+
xt_soft = torch.zeros(bs, torch.sum(self.mask_index+1), device=x.device)
|
| 255 |
+
xt = torch.zeros_like(x)
|
| 256 |
+
for i in range(len(self.num_classes)):
|
| 257 |
+
slice_i = self.slices_for_classes_with_mask[i]
|
| 258 |
+
# set the bernoulli probabilities, which determines the "coin flip" transition to the mask class
|
| 259 |
+
prob_i = torch.zeros(bs, 2, device=x.device)
|
| 260 |
+
prob_i[:,0] = 1-move_chance[:,i]
|
| 261 |
+
prob_i[:,-1] = move_chance[:,i]
|
| 262 |
+
log_prob_i = torch.log(prob_i)
|
| 263 |
+
# draw soft samples and place them back to the corresponding columns
|
| 264 |
+
soft_sample_i = F.gumbel_softmax(log_prob_i, tau=0.01, hard=True)
|
| 265 |
+
idx = torch.stack((x[:,i]+slice_i[0], torch.ones_like(x[:,i])*slice_i[-1]), dim=-1)
|
| 266 |
+
xt_soft[torch.arange(len(idx)).unsqueeze(1), idx] = soft_sample_i
|
| 267 |
+
# retrieve the hard samples
|
| 268 |
+
xt[:, i] = torch.where(soft_sample_i[:,1] > soft_sample_i[:,0], self.mask_index[i], x[:,i])
|
| 269 |
+
return xt, xt_soft
|
| 270 |
+
|
| 271 |
+
|
| 272 |
+
def _subs_parameterization(self, unormalized_prob, xt):
|
| 273 |
+
# log prob at the mask index = - infinity
|
| 274 |
+
unormalized_prob = self.pad(unormalized_prob, self.neg_infinity)
|
| 275 |
+
|
| 276 |
+
unormalized_prob[:, range(unormalized_prob.shape[1]), self.mask_index] += self.neg_infinity
|
| 277 |
+
|
| 278 |
+
# Take log softmax on the unnormalized probabilities to the logits
|
| 279 |
+
logits = unormalized_prob - torch.logsumexp(unormalized_prob, dim=-1,
|
| 280 |
+
keepdim=True)
|
| 281 |
+
# Apply updates directly in the logits matrix.
|
| 282 |
+
# For the logits of the unmasked tokens, set all values
|
| 283 |
+
# to -infinity except for the indices corresponding to
|
| 284 |
+
# the unmasked tokens.
|
| 285 |
+
unmasked_indices = (xt != self.mask_index) # (bs, K)
|
| 286 |
+
logits[unmasked_indices] = self.neg_infinity
|
| 287 |
+
logits[unmasked_indices, xt[unmasked_indices]] = 0
|
| 288 |
+
return logits
|
| 289 |
+
|
| 290 |
+
def pad(self, x, pad_value):
|
| 291 |
+
"""
|
| 292 |
+
Converts a concatenated tensor of class probabilities into a padded matrix,
|
| 293 |
+
where each sub-tensor is padded along the last dimension to match the largest
|
| 294 |
+
category size (max number of classes).
|
| 295 |
+
|
| 296 |
+
Args:
|
| 297 |
+
x (Tensor): The input tensor containing concatenated probabilities for all the categories in x_cat.
|
| 298 |
+
[bs, sum(num_classes_w_mask)]
|
| 299 |
+
pad_value (float): The value filled into the dummy entries, which are padded to ensure all sub-tensors have equal size
|
| 300 |
+
along the last dimension.
|
| 301 |
+
|
| 302 |
+
Returns:
|
| 303 |
+
Tensor: A new tensorwith
|
| 304 |
+
[bs, len(num_classes_w_mask), max(num_classes_w_mask)), num_categories]
|
| 305 |
+
"""
|
| 306 |
+
splited = torch.split(x, self.num_classes_w_mask, dim=-1)
|
| 307 |
+
max_K = max(self.num_classes_w_mask)
|
| 308 |
+
padded_ = [
|
| 309 |
+
torch.cat((
|
| 310 |
+
t,
|
| 311 |
+
pad_value*torch.ones(*(t.shape[:-1]), max_K-t.shape[-1], dtype=t.dtype, device=t.device)
|
| 312 |
+
), dim=-1)
|
| 313 |
+
for t in splited]
|
| 314 |
+
out = torch.stack(padded_, dim=-2)
|
| 315 |
+
return out
|
| 316 |
+
|
| 317 |
+
def to_one_hot(self, x_cat):
|
| 318 |
+
x_cat_oh = torch.cat(
|
| 319 |
+
[F.one_hot(x_cat[:, i], num_classes=self.num_classes[i]+1,) for i in range(len(self.num_classes))],
|
| 320 |
+
dim=-1
|
| 321 |
+
)
|
| 322 |
+
return x_cat_oh
|
| 323 |
+
|
| 324 |
+
def _absorbed_closs(self, model_output, x0, sigma, dsigma):
|
| 325 |
+
"""
|
| 326 |
+
alpha: (bs,)
|
| 327 |
+
"""
|
| 328 |
+
log_p_theta = torch.gather(
|
| 329 |
+
model_output, -1, x0[:, :, None]
|
| 330 |
+
).squeeze(-1)
|
| 331 |
+
alpha = torch.exp(-sigma)
|
| 332 |
+
if self.cat_scheduler in ['log_linear_unified', 'log_linear_per_column']:
|
| 333 |
+
elbo_weight = - dsigma / torch.expm1(sigma)
|
| 334 |
+
else:
|
| 335 |
+
elbo_weight = -1/(1-alpha)
|
| 336 |
+
|
| 337 |
+
loss = elbo_weight * log_p_theta
|
| 338 |
+
return loss
|
| 339 |
+
|
| 340 |
+
def _sample_masked_prior(self, *batch_dims):
|
| 341 |
+
return self.mask_index[None,:] * torch.ones(
|
| 342 |
+
* batch_dims, dtype=torch.int64, device=self.mask_index.device)
|
| 343 |
+
|
| 344 |
+
def _mdlm_update(self, log_p_x0, x, alpha_t, alpha_s):
|
| 345 |
+
"""
|
| 346 |
+
# t: (bs,)
|
| 347 |
+
log_p_x0: (bs, K, K_max)
|
| 348 |
+
# alpha_t: (bs,)
|
| 349 |
+
# alpha_s: (bs,)
|
| 350 |
+
alpha_t: (bs, 1/K_cat)
|
| 351 |
+
alpha_s: (bs,1/K_cat)
|
| 352 |
+
"""
|
| 353 |
+
move_chance_t = 1 - alpha_t
|
| 354 |
+
move_chance_s = 1 - alpha_s
|
| 355 |
+
move_chance_t = move_chance_t.unsqueeze(-1)
|
| 356 |
+
move_chance_s = move_chance_s.unsqueeze(-1)
|
| 357 |
+
assert move_chance_t.ndim == log_p_x0.ndim
|
| 358 |
+
# Technically, this isn't q_xs since there's a division
|
| 359 |
+
# term that is missing. This division term doesn't affect
|
| 360 |
+
# the samples.
|
| 361 |
+
# There is a noremalizing term is (1-\alpha_t) who's responsility is to ensure q_xs is normalized.
|
| 362 |
+
# However, omiting it won't make a difference for the Gumbel-max sampling trick in _sample_categorical()
|
| 363 |
+
q_xs = log_p_x0.exp() * (move_chance_t
|
| 364 |
+
- move_chance_s)
|
| 365 |
+
q_xs[:, range(q_xs.shape[1]), self.mask_index] = move_chance_s[:, :, 0]
|
| 366 |
+
|
| 367 |
+
# Important: make sure that prob of dummy classes are exactly 0
|
| 368 |
+
dummy_mask = torch.tensor([[(1 if i <= mask_idx else 0) for i in range(max(self.mask_index+1))] for mask_idx in self.mask_index], device=q_xs.device)
|
| 369 |
+
dummy_mask = torch.ones_like(q_xs) * dummy_mask
|
| 370 |
+
q_xs *= dummy_mask
|
| 371 |
+
|
| 372 |
+
_x = self._sample_categorical(q_xs)
|
| 373 |
+
|
| 374 |
+
copy_flag = (x != self.mask_index).to(x.dtype)
|
| 375 |
+
|
| 376 |
+
z_cat = copy_flag * x + (1 - copy_flag) * _x
|
| 377 |
+
return copy_flag * x + (1 - copy_flag) * _x, q_xs
|
| 378 |
+
|
| 379 |
+
def _sample_categorical(self, categorical_probs):
|
| 380 |
+
gumbel_norm = (
|
| 381 |
+
1e-10
|
| 382 |
+
- (torch.rand_like(categorical_probs) + 1e-10).log())
|
| 383 |
+
return (categorical_probs / gumbel_norm).argmax(dim=-1)
|
| 384 |
+
|
| 385 |
+
def sample_ctime_noise(self, batch):
|
| 386 |
+
if self.noise_dist == 'log_norm':
|
| 387 |
+
rnd_normal = torch.randn(batch.shape[0], device=batch.device)
|
| 388 |
+
sigma = (rnd_normal * self.noise_dist_params['P_std'] + self.noise_dist_params['P_mean']).exp()
|
| 389 |
+
else:
|
| 390 |
+
raise NotImplementedError(f"The noise distribution--{self.noise_dist}-- is not implemented for CTIME ")
|
| 391 |
+
return sigma
|
| 392 |
+
|
| 393 |
+
def _edm_loss(self, D_yn, y, sigma):
|
| 394 |
+
weight = (sigma ** 2 + self.edm_params['sigma_data'] ** 2) / (sigma * self.edm_params['sigma_data']) ** 2
|
| 395 |
+
|
| 396 |
+
target = y
|
| 397 |
+
loss = weight * ((D_yn - target) ** 2)
|
| 398 |
+
|
| 399 |
+
return loss
|
| 400 |
+
|
| 401 |
+
def edm_update(
|
| 402 |
+
self, x_num_cur, x_cat_cur, i,
|
| 403 |
+
t_cur, t_next, t_hat,
|
| 404 |
+
sigma_num_cur, sigma_num_next, sigma_num_hat,
|
| 405 |
+
sigma_cat_cur, sigma_cat_next, sigma_cat_hat,
|
| 406 |
+
):
|
| 407 |
+
"""
|
| 408 |
+
i = T-1,...,0
|
| 409 |
+
"""
|
| 410 |
+
cfg = self.y_only_model is not None
|
| 411 |
+
|
| 412 |
+
b = x_num_cur.shape[0]
|
| 413 |
+
has_cat = len(self.num_classes) > 0
|
| 414 |
+
|
| 415 |
+
# Get x_num_hat by move towards the noise by a small step
|
| 416 |
+
x_num_hat = x_num_cur + (sigma_num_hat ** 2 - sigma_num_cur ** 2).sqrt() * S_noise * torch.randn_like(x_num_cur)
|
| 417 |
+
# Get x_cat_hat
|
| 418 |
+
move_chance = -torch.expm1(sigma_cat_cur - sigma_cat_hat) # the incremental move change is 1 - alpha_t/alpha_s = 1 - exp(sigma_s - sigma_t)
|
| 419 |
+
x_cat_hat, _ = self.q_xt(x_cat_cur, move_chance) if has_cat else (x_cat_cur, x_cat_cur)
|
| 420 |
+
|
| 421 |
+
# Get predictions
|
| 422 |
+
x_cat_hat_oh = self.to_one_hot(x_cat_hat).to(x_num_hat.dtype) if has_cat else x_cat_hat
|
| 423 |
+
denoised, raw_logits = self._denoise_fn(
|
| 424 |
+
x_num_hat.float(), x_cat_hat_oh,
|
| 425 |
+
t_hat.squeeze().repeat(b), sigma=sigma_num_hat.unsqueeze(0).repeat(b,1) # sigma accepts (bs, K_num)
|
| 426 |
+
)
|
| 427 |
+
|
| 428 |
+
# Apply cfg updates, if is in cfg mode
|
| 429 |
+
is_bin_class = len(self.num_mask_idx) == 0
|
| 430 |
+
is_learnable = self.scheduler=="power_mean_per_column"
|
| 431 |
+
if cfg:
|
| 432 |
+
if not is_learnable:
|
| 433 |
+
sigma_cond = sigma_num_hat
|
| 434 |
+
else:
|
| 435 |
+
if is_bin_class:
|
| 436 |
+
sigma_cond = (0.002 ** (1/7) + t_hat * (80 ** (1/7) - 0.002 ** (1/7))).pow(7)
|
| 437 |
+
else:
|
| 438 |
+
sigma_cond = sigma_num_hat[self.num_mask_idx]
|
| 439 |
+
y_num_hat = x_num_hat.float()[:, self.num_mask_idx]
|
| 440 |
+
idx = list(chain(*[self.slices_for_classes_with_mask[i] for i in self.cat_mask_idx]))
|
| 441 |
+
y_cat_hat = x_cat_hat_oh[:,idx]
|
| 442 |
+
y_only_denoised, y_only_raw_logits = self.y_only_model(
|
| 443 |
+
y_num_hat,
|
| 444 |
+
y_cat_hat,
|
| 445 |
+
t_hat.squeeze().repeat(b), sigma=sigma_cond.unsqueeze(0).repeat(b,1) # sigma accepts (bs, K_num)
|
| 446 |
+
)
|
| 447 |
+
|
| 448 |
+
denoised[:, self.num_mask_idx] *= 1 + self.w_num
|
| 449 |
+
denoised[:, self.num_mask_idx] -= self.w_num*y_only_denoised
|
| 450 |
+
|
| 451 |
+
mask_logit_idx = [self.slices_for_classes_with_mask[i] for i in self.cat_mask_idx]
|
| 452 |
+
mask_logit_idx = np.concatenate(mask_logit_idx) if len(mask_logit_idx)>0 else np.array([])
|
| 453 |
+
|
| 454 |
+
raw_logits[:, mask_logit_idx] *= 1 + self.w_cat
|
| 455 |
+
raw_logits[:, mask_logit_idx] -= self.w_cat*y_only_raw_logits
|
| 456 |
+
|
| 457 |
+
# Euler step
|
| 458 |
+
d_cur = (x_num_hat - denoised) / sigma_num_hat
|
| 459 |
+
x_num_next = x_num_hat + (sigma_num_next - sigma_num_hat) * d_cur
|
| 460 |
+
|
| 461 |
+
# Unmasking
|
| 462 |
+
x_cat_next = x_cat_cur
|
| 463 |
+
q_xs = torch.zeros_like(x_cat_cur).float()
|
| 464 |
+
if has_cat:
|
| 465 |
+
logits = self._subs_parameterization(raw_logits, x_cat_hat)
|
| 466 |
+
alpha_t = torch.exp(-sigma_cat_hat).unsqueeze(0).repeat(b,1)
|
| 467 |
+
alpha_s = torch.exp(-sigma_cat_next).unsqueeze(0).repeat(b,1)
|
| 468 |
+
x_cat_next, q_xs = self._mdlm_update(logits, x_cat_hat, alpha_t, alpha_s)
|
| 469 |
+
|
| 470 |
+
# Apply 2nd order correction.
|
| 471 |
+
if self.sampler_params['second_order_correction']:
|
| 472 |
+
if i > 0:
|
| 473 |
+
x_cat_hat_oh = self.to_one_hot(x_cat_hat).to(x_num_next.dtype) if has_cat else x_cat_hat
|
| 474 |
+
denoised, raw_logits = self._denoise_fn(
|
| 475 |
+
x_num_next.float(), x_cat_hat_oh,
|
| 476 |
+
t_next.squeeze().repeat(b), sigma=sigma_num_next.unsqueeze(0).repeat(b,1)
|
| 477 |
+
)
|
| 478 |
+
if cfg:
|
| 479 |
+
if not is_learnable:
|
| 480 |
+
sigma_cond = sigma_num_next
|
| 481 |
+
else:
|
| 482 |
+
if is_bin_class:
|
| 483 |
+
sigma_cond = (0.002 ** (1/7) + t_next * (80 ** (1/7) - 0.002 ** (1/7))).pow(7)
|
| 484 |
+
else:
|
| 485 |
+
sigma_cond = sigma_num_next[self.num_mask_idx]
|
| 486 |
+
y_num_next = x_num_next.float()[:, self.num_mask_idx]
|
| 487 |
+
idx = list(chain(*[self.slices_for_classes_with_mask[i] for i in self.cat_mask_idx]))
|
| 488 |
+
y_cat_hat = x_cat_hat_oh[:, idx]
|
| 489 |
+
y_only_denoised, y_only_raw_logits = self.y_only_model(
|
| 490 |
+
y_num_next,
|
| 491 |
+
y_cat_hat,
|
| 492 |
+
t_next.squeeze().repeat(b), sigma=sigma_cond.unsqueeze(0).repeat(b,1) # sigma accepts (bs, K_num)
|
| 493 |
+
)
|
| 494 |
+
denoised[:, self.num_mask_idx] *= 1 + self.w_num
|
| 495 |
+
denoised[:, self.num_mask_idx] -= self.w_num*y_only_denoised
|
| 496 |
+
|
| 497 |
+
d_prime = (x_num_next - denoised) / sigma_num_next
|
| 498 |
+
x_num_next = x_num_hat + (sigma_num_next - sigma_num_hat) * (0.5 * d_cur + 0.5 * d_prime)
|
| 499 |
+
|
| 500 |
+
return x_num_next, x_cat_next, q_xs
|
| 501 |
+
|
| 502 |
+
|
| 503 |
+
def sample_impute(self, x_num, x_cat, num_mask_idx, cat_mask_idx, resample_rounds, impute_condition, w_num, w_cat):
|
| 504 |
+
self.w_num = w_num
|
| 505 |
+
self.w_cat = w_cat
|
| 506 |
+
self.num_mask_idx = num_mask_idx
|
| 507 |
+
self.cat_mask_idx = cat_mask_idx
|
| 508 |
+
|
| 509 |
+
b = x_num.size(0)
|
| 510 |
+
device = self.device
|
| 511 |
+
dtype = torch.float32
|
| 512 |
+
|
| 513 |
+
# Create masks, true for the missing columns
|
| 514 |
+
num_mask = [i in num_mask_idx for i in range(self.num_numerical_features)]
|
| 515 |
+
cat_mask = [i in cat_mask_idx for i in range(len(self.num_classes))]
|
| 516 |
+
num_mask = torch.tensor(num_mask).to(x_num.device).to(x_num.dtype)
|
| 517 |
+
cat_mask = torch.tensor(cat_mask).to(x_cat.device).to(x_cat.dtype)
|
| 518 |
+
|
| 519 |
+
# Create the chain of t
|
| 520 |
+
t = torch.linspace(0,1,self.num_timesteps, dtype=dtype, device=device) # times = 0.0,...,1.0
|
| 521 |
+
t = t[:, None]
|
| 522 |
+
|
| 523 |
+
# Compute the chains of sigma
|
| 524 |
+
sigma_num_cur = self.num_schedule.total_noise(t)
|
| 525 |
+
sigma_cat_cur = self.cat_schedule.total_noise(t)
|
| 526 |
+
sigma_num_next = torch.zeros_like(sigma_num_cur)
|
| 527 |
+
sigma_num_next[1:] = sigma_num_cur[0:-1]
|
| 528 |
+
sigma_cat_next = torch.zeros_like(sigma_cat_cur)
|
| 529 |
+
sigma_cat_next[1:] = sigma_cat_cur[0:-1]
|
| 530 |
+
|
| 531 |
+
# Prepare sigma_hat for stochastic sampling mode
|
| 532 |
+
if self.sampler_params['stochastic_sampler']:
|
| 533 |
+
gamma = min(S_churn / self.num_timesteps, np.sqrt(2) - 1) * (S_min <= sigma_num_cur) * (sigma_num_cur <= S_max)
|
| 534 |
+
sigma_num_hat = sigma_num_cur + gamma * sigma_num_cur
|
| 535 |
+
t_hat = self.num_schedule.inverse_to_t(sigma_num_hat)
|
| 536 |
+
t_hat = torch.min(t_hat, dim=-1, keepdim=True).values # take the samllest t_hat induced by sigma_num
|
| 537 |
+
zero_gamma = (gamma==0).any()
|
| 538 |
+
t_hat[zero_gamma] = t[zero_gamma]
|
| 539 |
+
out_of_bound = (t_hat > 1).squeeze()
|
| 540 |
+
sigma_num_hat[out_of_bound] = sigma_num_cur[out_of_bound]
|
| 541 |
+
t_hat[out_of_bound] = t[out_of_bound]
|
| 542 |
+
sigma_cat_hat = self.cat_schedule.total_noise(t_hat)
|
| 543 |
+
else:
|
| 544 |
+
t_hat = t
|
| 545 |
+
sigma_num_hat = sigma_num_cur
|
| 546 |
+
sigma_cat_hat = sigma_cat_cur
|
| 547 |
+
|
| 548 |
+
# Sample priors for the continuous dimensions
|
| 549 |
+
if impute_condition == "x_t":
|
| 550 |
+
z_norm = x_num + torch.randn((b, self.num_numerical_features), device=device) * sigma_num_cur[-1] # z_{t_max} = x_0(masked) + sigma_max*epsilon
|
| 551 |
+
elif impute_condition == "x_0":
|
| 552 |
+
z_norm = x_num
|
| 553 |
+
|
| 554 |
+
# Sample priors for the discrete dimensions
|
| 555 |
+
has_cat = len(self.num_classes) > 0
|
| 556 |
+
z_cat = torch.zeros((b, 0), device=device).float() # the default values for categorical sample if the dataset has no categorical entry
|
| 557 |
+
if has_cat:
|
| 558 |
+
if impute_condition == "x_t":
|
| 559 |
+
z_cat = self._sample_masked_prior(
|
| 560 |
+
b,
|
| 561 |
+
len(self.num_classes),
|
| 562 |
+
) # z_{t_max} is still all pushed to [MASK]
|
| 563 |
+
elif impute_condition == "x_0":
|
| 564 |
+
z_cat = x_cat
|
| 565 |
+
|
| 566 |
+
pbar = tqdm(reversed(range(0, self.num_timesteps)), total=self.num_timesteps)
|
| 567 |
+
pbar.set_description(f"Sampling Progress")
|
| 568 |
+
for i in pbar:
|
| 569 |
+
for u in range (resample_rounds):
|
| 570 |
+
# Get known parts by Forward Flow
|
| 571 |
+
if impute_condition == "x_t":
|
| 572 |
+
z_norm_known = x_num + torch.randn((b, self.num_numerical_features), device=device) * sigma_num_next[i]
|
| 573 |
+
move_chance = 1 - torch.exp(-sigma_cat_next[i]) if i < (self.num_timesteps-1) else torch.ones_like(sigma_cat_next[i]) # force move_chance to be 1 for the first iteration
|
| 574 |
+
z_cat_known, _ = self.q_xt(x_cat, move_chance)
|
| 575 |
+
elif impute_condition == "x_0":
|
| 576 |
+
z_norm_known = x_num
|
| 577 |
+
z_cat_known = x_cat
|
| 578 |
+
|
| 579 |
+
# Get unknown by Reverse Step
|
| 580 |
+
z_norm_unknown, z_cat_unknown, q_xs = self.edm_update(
|
| 581 |
+
z_norm, z_cat, i,
|
| 582 |
+
t[i], t[i-1] if i > 0 else None, t_hat[i],
|
| 583 |
+
sigma_num_cur[i], sigma_num_next[i], sigma_num_hat[i],
|
| 584 |
+
sigma_cat_cur[i], sigma_cat_next[i], sigma_cat_hat[i],
|
| 585 |
+
)
|
| 586 |
+
z_norm = (1 - num_mask) * z_norm_known + num_mask * z_norm_unknown
|
| 587 |
+
z_cat = (1 - cat_mask) * z_cat_known + cat_mask * z_cat_unknown
|
| 588 |
+
|
| 589 |
+
# Resample x_t from x_{t-1} by Foward Step
|
| 590 |
+
if u < resample_rounds-1:
|
| 591 |
+
z_norm = z_norm + (sigma_num_cur[i] ** 2 - sigma_num_next[i] ** 2).sqrt() * S_noise * torch.randn_like(z_norm)
|
| 592 |
+
move_chance = -torch.expm1(sigma_cat_next[i] - sigma_cat_cur[i])
|
| 593 |
+
z_cat, _ = self.q_xt(z_cat, move_chance)
|
| 594 |
+
|
| 595 |
+
sample = torch.cat([z_norm, z_cat], dim=1).cpu()
|
| 596 |
+
return sample
|
| 597 |
+
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/modules/main_modules.py
ADDED
|
@@ -0,0 +1,167 @@
|
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|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
| 1 |
+
from typing import Callable, Union
|
| 2 |
+
|
| 3 |
+
from tabdiff.modules.transformer import Reconstructor, Tokenizer, Transformer
|
| 4 |
+
import torch
|
| 5 |
+
import torch.nn as nn
|
| 6 |
+
import torch.optim
|
| 7 |
+
|
| 8 |
+
ModuleType = Union[str, Callable[..., nn.Module]]
|
| 9 |
+
|
| 10 |
+
class SiLU(nn.Module):
|
| 11 |
+
def forward(self, x):
|
| 12 |
+
return x * torch.sigmoid(x)
|
| 13 |
+
|
| 14 |
+
class PositionalEmbedding(torch.nn.Module):
|
| 15 |
+
def __init__(self, num_channels, max_positions=10000, endpoint=False):
|
| 16 |
+
super().__init__()
|
| 17 |
+
self.num_channels = num_channels
|
| 18 |
+
self.max_positions = max_positions
|
| 19 |
+
self.endpoint = endpoint
|
| 20 |
+
|
| 21 |
+
def forward(self, x):
|
| 22 |
+
freqs = torch.arange(start=0, end=self.num_channels//2, dtype=torch.float32, device=x.device)
|
| 23 |
+
freqs = freqs / (self.num_channels // 2 - (1 if self.endpoint else 0))
|
| 24 |
+
freqs = (1 / self.max_positions) ** freqs
|
| 25 |
+
x = x.ger(freqs.to(x.dtype))
|
| 26 |
+
x = torch.cat([x.cos(), x.sin()], dim=1)
|
| 27 |
+
return x
|
| 28 |
+
|
| 29 |
+
|
| 30 |
+
class MLPDiffusion(nn.Module):
|
| 31 |
+
def __init__(self, d_in, dim_t = 512, use_mlp=True):
|
| 32 |
+
super().__init__()
|
| 33 |
+
self.dim_t = dim_t
|
| 34 |
+
|
| 35 |
+
self.proj = nn.Linear(d_in, dim_t)
|
| 36 |
+
|
| 37 |
+
self.mlp = nn.Sequential(
|
| 38 |
+
nn.Linear(dim_t, dim_t * 2),
|
| 39 |
+
nn.SiLU(),
|
| 40 |
+
nn.Linear(dim_t * 2, dim_t * 2),
|
| 41 |
+
nn.SiLU(),
|
| 42 |
+
nn.Linear(dim_t * 2, dim_t),
|
| 43 |
+
nn.SiLU(),
|
| 44 |
+
nn.Linear(dim_t, d_in),
|
| 45 |
+
) if use_mlp else nn.Linear(dim_t, d_in)
|
| 46 |
+
|
| 47 |
+
self.map_noise = PositionalEmbedding(num_channels=dim_t)
|
| 48 |
+
self.time_embed = nn.Sequential(
|
| 49 |
+
nn.Linear(dim_t, dim_t),
|
| 50 |
+
nn.SiLU(),
|
| 51 |
+
nn.Linear(dim_t, dim_t)
|
| 52 |
+
)
|
| 53 |
+
|
| 54 |
+
self.use_mlp = use_mlp
|
| 55 |
+
|
| 56 |
+
def forward(self, x, timesteps):
|
| 57 |
+
emb = self.map_noise(timesteps)
|
| 58 |
+
emb = emb.reshape(emb.shape[0], 2, -1).flip(1).reshape(*emb.shape) # swap sin/cos
|
| 59 |
+
emb = self.time_embed(emb)
|
| 60 |
+
|
| 61 |
+
x = self.proj(x) + emb
|
| 62 |
+
return self.mlp(x)
|
| 63 |
+
|
| 64 |
+
class UniModMLP(nn.Module):
|
| 65 |
+
"""
|
| 66 |
+
Input:
|
| 67 |
+
x_num: [bs, d_numerical]
|
| 68 |
+
x_cat: [bs, len(categories)]
|
| 69 |
+
Output:
|
| 70 |
+
x_num_pred: [bs, d_numerical], the predicted mean for numerical data
|
| 71 |
+
x_cat_pred: [bs, sum(categories)], the predicted UNORMALIZED logits for categorical data
|
| 72 |
+
"""
|
| 73 |
+
def __init__(
|
| 74 |
+
self, d_numerical, categories, num_layers, d_token,
|
| 75 |
+
n_head = 1, factor = 4, bias = True, dim_t=512, use_mlp=True, **kwargs
|
| 76 |
+
):
|
| 77 |
+
super().__init__()
|
| 78 |
+
self.d_numerical = d_numerical
|
| 79 |
+
self.categories = categories
|
| 80 |
+
|
| 81 |
+
self.tokenizer = Tokenizer(d_numerical, categories, d_token, bias = bias)
|
| 82 |
+
self.encoder = Transformer(num_layers, d_token, n_head, d_token, factor)
|
| 83 |
+
d_in = d_token * (d_numerical + len(categories))
|
| 84 |
+
self.mlp = MLPDiffusion(d_in, dim_t=dim_t, use_mlp=use_mlp)
|
| 85 |
+
self.decoder = Transformer(num_layers, d_token, n_head, d_token, factor)
|
| 86 |
+
self.detokenizer = Reconstructor(d_numerical, categories, d_token)
|
| 87 |
+
|
| 88 |
+
self.model = nn.ModuleList([self.tokenizer, self.encoder, self.mlp, self.decoder, self.detokenizer])
|
| 89 |
+
|
| 90 |
+
def forward(self, x_num, x_cat, timesteps):
|
| 91 |
+
e = self.tokenizer(x_num, x_cat)
|
| 92 |
+
decoder_input = e[:, 1:, :] # ignore the first CLS token.
|
| 93 |
+
y = self.encoder(decoder_input)
|
| 94 |
+
pred_y = self.mlp(y.reshape(y.shape[0], -1), timesteps)
|
| 95 |
+
pred_e = self.decoder(pred_y.reshape(*y.shape))
|
| 96 |
+
x_num_pred, x_cat_pred = self.detokenizer(pred_e)
|
| 97 |
+
x_cat_pred = torch.cat(x_cat_pred, dim=-1) if len(x_cat_pred)>0 else torch.zeros_like(x_cat).to(x_num_pred.dtype)
|
| 98 |
+
|
| 99 |
+
return x_num_pred, x_cat_pred
|
| 100 |
+
|
| 101 |
+
|
| 102 |
+
class Precond(nn.Module):
|
| 103 |
+
def __init__(self,
|
| 104 |
+
denoise_fn,
|
| 105 |
+
sigma_data = 0.5, # Expected standard deviation of the training data.
|
| 106 |
+
net_conditioning = "sigma",
|
| 107 |
+
):
|
| 108 |
+
super().__init__()
|
| 109 |
+
self.sigma_data = sigma_data
|
| 110 |
+
self.net_conditioning = net_conditioning
|
| 111 |
+
self.denoise_fn_F = denoise_fn
|
| 112 |
+
|
| 113 |
+
def forward(self, x_num, x_cat, t, sigma):
|
| 114 |
+
|
| 115 |
+
x_num = x_num.to(torch.float32)
|
| 116 |
+
|
| 117 |
+
sigma = sigma.to(torch.float32)
|
| 118 |
+
assert sigma.ndim == 2
|
| 119 |
+
if sigma.dim() > 1: # if learnable column-wise noise schedule, sigma conditioning is set to the defaults schedule of rho=7
|
| 120 |
+
sigma_cond = (0.002 ** (1/7) + t * (80 ** (1/7) - 0.002 ** (1/7))).pow(7)
|
| 121 |
+
else:
|
| 122 |
+
sigma_cond = sigma
|
| 123 |
+
dtype = torch.float32
|
| 124 |
+
|
| 125 |
+
c_skip = self.sigma_data ** 2 / (sigma ** 2 + self.sigma_data ** 2)
|
| 126 |
+
c_out = sigma * self.sigma_data / (sigma ** 2 + self.sigma_data ** 2).sqrt()
|
| 127 |
+
c_in = 1 / (self.sigma_data ** 2 + sigma ** 2).sqrt()
|
| 128 |
+
c_noise = sigma_cond.log() / 4
|
| 129 |
+
|
| 130 |
+
x_in = c_in * x_num
|
| 131 |
+
if self.net_conditioning == "sigma":
|
| 132 |
+
F_x, x_cat_pred = self.denoise_fn_F(x_in, x_cat, c_noise.flatten())
|
| 133 |
+
elif self.net_conditioning == "t":
|
| 134 |
+
F_x, x_cat_pred = self.denoise_fn_F(x_in, x_cat, t)
|
| 135 |
+
|
| 136 |
+
assert F_x.dtype == dtype
|
| 137 |
+
D_x = c_skip * x_num + c_out * F_x.to(torch.float32)
|
| 138 |
+
|
| 139 |
+
return D_x, x_cat_pred
|
| 140 |
+
|
| 141 |
+
|
| 142 |
+
class Model(nn.Module):
|
| 143 |
+
def __init__(
|
| 144 |
+
self, denoise_fn,
|
| 145 |
+
sigma_data=0.5,
|
| 146 |
+
precond=False,
|
| 147 |
+
net_conditioning="sigma",
|
| 148 |
+
**kwargs
|
| 149 |
+
):
|
| 150 |
+
super().__init__()
|
| 151 |
+
self.precond = precond
|
| 152 |
+
if precond:
|
| 153 |
+
self.denoise_fn_D = Precond(
|
| 154 |
+
denoise_fn,
|
| 155 |
+
sigma_data=sigma_data,
|
| 156 |
+
net_conditioning=net_conditioning
|
| 157 |
+
)
|
| 158 |
+
else:
|
| 159 |
+
self.denoise_fn_D = denoise_fn
|
| 160 |
+
|
| 161 |
+
def forward(self, x_num, x_cat, t, sigma=None):
|
| 162 |
+
if self.precond:
|
| 163 |
+
return self.denoise_fn_D(x_num, x_cat, t, sigma)
|
| 164 |
+
else:
|
| 165 |
+
return self.denoise_fn_D(x_num, x_cat, t)
|
| 166 |
+
|
| 167 |
+
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/modules/transformer.py
ADDED
|
@@ -0,0 +1,258 @@
|
|
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|
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|
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|
|
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|
|
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|
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|
|
|
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|
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|
|
|
|
|
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|
|
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|
|
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|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import numpy as np
|
| 2 |
+
import torch
|
| 3 |
+
import torch.nn as nn
|
| 4 |
+
import torch.nn.init as nn_init
|
| 5 |
+
import torch.nn.functional as F
|
| 6 |
+
from torch import Tensor
|
| 7 |
+
|
| 8 |
+
import math
|
| 9 |
+
|
| 10 |
+
class Tokenizer(nn.Module):
|
| 11 |
+
|
| 12 |
+
def __init__(self, d_numerical, categories, d_token, bias):
|
| 13 |
+
super().__init__()
|
| 14 |
+
if categories is None:
|
| 15 |
+
d_bias = d_numerical
|
| 16 |
+
self.category_offsets = None
|
| 17 |
+
self.category_embeddings = None
|
| 18 |
+
else:
|
| 19 |
+
d_bias = d_numerical + len(categories)
|
| 20 |
+
category_offsets = torch.tensor([0] + list(categories[:-1])).cumsum(0)
|
| 21 |
+
self.register_buffer('category_offsets', category_offsets)
|
| 22 |
+
self.cat_weight = nn.Parameter(Tensor(sum(categories), d_token))
|
| 23 |
+
nn.init.kaiming_uniform_(self.cat_weight, a=math.sqrt(5))
|
| 24 |
+
|
| 25 |
+
# take [CLS] token into account
|
| 26 |
+
self.weight = nn.Parameter(Tensor(d_numerical + 1, d_token))
|
| 27 |
+
self.bias = nn.Parameter(Tensor(d_bias, d_token)) if bias else None
|
| 28 |
+
# The initialization is inspired by nn.Linear
|
| 29 |
+
nn_init.kaiming_uniform_(self.weight, a=math.sqrt(5))
|
| 30 |
+
if self.bias is not None:
|
| 31 |
+
nn_init.kaiming_uniform_(self.bias, a=math.sqrt(5))
|
| 32 |
+
|
| 33 |
+
@property
|
| 34 |
+
def n_tokens(self):
|
| 35 |
+
return len(self.weight) + (
|
| 36 |
+
0 if self.category_offsets is None else len(self.category_offsets)
|
| 37 |
+
)
|
| 38 |
+
|
| 39 |
+
def forward(self, x_num, x_cat):
|
| 40 |
+
x_some = x_num if x_cat is None else x_cat
|
| 41 |
+
assert x_some is not None
|
| 42 |
+
x_num = torch.cat(
|
| 43 |
+
[torch.ones(len(x_some), 1, device=x_some.device)] # [CLS]
|
| 44 |
+
+ ([] if x_num is None else [x_num]),
|
| 45 |
+
dim=1,
|
| 46 |
+
)
|
| 47 |
+
|
| 48 |
+
x = self.weight[None] * x_num[:, :, None]
|
| 49 |
+
|
| 50 |
+
if x_cat is not None:
|
| 51 |
+
for start, end in zip(self.category_offsets, torch.cat([self.category_offsets[1:], torch.tensor([x_cat.shape[1]], device=x_cat.device)])):
|
| 52 |
+
if start < end:
|
| 53 |
+
x = torch.cat(
|
| 54 |
+
[x, x_cat[:, start:end].unsqueeze(1) @ self.cat_weight[start:end][None]],
|
| 55 |
+
dim=1,
|
| 56 |
+
)
|
| 57 |
+
if self.bias is not None:
|
| 58 |
+
bias = torch.cat(
|
| 59 |
+
[
|
| 60 |
+
torch.zeros(1, self.bias.shape[1], device=x.device),
|
| 61 |
+
self.bias,
|
| 62 |
+
]
|
| 63 |
+
)
|
| 64 |
+
x = x + bias[None]
|
| 65 |
+
|
| 66 |
+
return x
|
| 67 |
+
|
| 68 |
+
|
| 69 |
+
class MultiheadAttention(nn.Module):
|
| 70 |
+
def __init__(self, d, n_heads, dropout, initialization = 'kaiming'):
|
| 71 |
+
|
| 72 |
+
if n_heads > 1:
|
| 73 |
+
assert d % n_heads == 0
|
| 74 |
+
assert initialization in ['xavier', 'kaiming']
|
| 75 |
+
|
| 76 |
+
super().__init__()
|
| 77 |
+
self.W_q = nn.Linear(d, d)
|
| 78 |
+
self.W_k = nn.Linear(d, d)
|
| 79 |
+
self.W_v = nn.Linear(d, d)
|
| 80 |
+
self.W_out = nn.Linear(d, d) if n_heads > 1 else None
|
| 81 |
+
self.n_heads = n_heads
|
| 82 |
+
self.dropout = nn.Dropout(dropout) if dropout else None
|
| 83 |
+
|
| 84 |
+
for m in [self.W_q, self.W_k, self.W_v]:
|
| 85 |
+
if initialization == 'xavier' and (n_heads > 1 or m is not self.W_v):
|
| 86 |
+
# gain is needed since W_qkv is represented with 3 separate layers
|
| 87 |
+
nn_init.xavier_uniform_(m.weight, gain=1 / math.sqrt(2))
|
| 88 |
+
nn_init.zeros_(m.bias)
|
| 89 |
+
if self.W_out is not None:
|
| 90 |
+
nn_init.zeros_(self.W_out.bias)
|
| 91 |
+
|
| 92 |
+
def _reshape(self, x):
|
| 93 |
+
batch_size, n_tokens, d = x.shape
|
| 94 |
+
d_head = d // self.n_heads
|
| 95 |
+
return (
|
| 96 |
+
x.reshape(batch_size, n_tokens, self.n_heads, d_head)
|
| 97 |
+
.transpose(1, 2)
|
| 98 |
+
.reshape(batch_size * self.n_heads, n_tokens, d_head)
|
| 99 |
+
)
|
| 100 |
+
|
| 101 |
+
def forward(self, x_q, x_kv, key_compression = None, value_compression = None):
|
| 102 |
+
|
| 103 |
+
q, k, v = self.W_q(x_q), self.W_k(x_kv), self.W_v(x_kv)
|
| 104 |
+
for tensor in [q, k, v]:
|
| 105 |
+
assert tensor.shape[-1] % self.n_heads == 0
|
| 106 |
+
if key_compression is not None:
|
| 107 |
+
assert value_compression is not None
|
| 108 |
+
k = key_compression(k.transpose(1, 2)).transpose(1, 2)
|
| 109 |
+
v = value_compression(v.transpose(1, 2)).transpose(1, 2)
|
| 110 |
+
else:
|
| 111 |
+
assert value_compression is None
|
| 112 |
+
|
| 113 |
+
batch_size = len(q)
|
| 114 |
+
d_head_key = k.shape[-1] // self.n_heads
|
| 115 |
+
d_head_value = v.shape[-1] // self.n_heads
|
| 116 |
+
n_q_tokens = q.shape[1]
|
| 117 |
+
|
| 118 |
+
q = self._reshape(q)
|
| 119 |
+
k = self._reshape(k)
|
| 120 |
+
|
| 121 |
+
a = q @ k.transpose(1, 2)
|
| 122 |
+
b = math.sqrt(d_head_key)
|
| 123 |
+
attention = F.softmax(a/b , dim=-1)
|
| 124 |
+
|
| 125 |
+
|
| 126 |
+
if self.dropout is not None:
|
| 127 |
+
attention = self.dropout(attention)
|
| 128 |
+
x = attention @ self._reshape(v)
|
| 129 |
+
x = (
|
| 130 |
+
x.reshape(batch_size, self.n_heads, n_q_tokens, d_head_value)
|
| 131 |
+
.transpose(1, 2)
|
| 132 |
+
.reshape(batch_size, n_q_tokens, self.n_heads * d_head_value)
|
| 133 |
+
)
|
| 134 |
+
if self.W_out is not None:
|
| 135 |
+
x = self.W_out(x)
|
| 136 |
+
|
| 137 |
+
return x
|
| 138 |
+
|
| 139 |
+
class Transformer(nn.Module):
|
| 140 |
+
|
| 141 |
+
def __init__(
|
| 142 |
+
self,
|
| 143 |
+
n_layers: int,
|
| 144 |
+
d_token: int,
|
| 145 |
+
n_heads: int,
|
| 146 |
+
d_out: int,
|
| 147 |
+
d_ffn_factor: int,
|
| 148 |
+
attention_dropout = 0.0,
|
| 149 |
+
ffn_dropout = 0.0,
|
| 150 |
+
residual_dropout = 0.0,
|
| 151 |
+
activation = 'relu',
|
| 152 |
+
prenormalization = True,
|
| 153 |
+
initialization = 'kaiming',
|
| 154 |
+
):
|
| 155 |
+
super().__init__()
|
| 156 |
+
|
| 157 |
+
def make_normalization():
|
| 158 |
+
return nn.LayerNorm(d_token)
|
| 159 |
+
|
| 160 |
+
d_hidden = int(d_token * d_ffn_factor)
|
| 161 |
+
self.layers = nn.ModuleList([])
|
| 162 |
+
for layer_idx in range(n_layers):
|
| 163 |
+
layer = nn.ModuleDict(
|
| 164 |
+
{
|
| 165 |
+
'attention': MultiheadAttention(
|
| 166 |
+
d_token, n_heads, attention_dropout, initialization
|
| 167 |
+
),
|
| 168 |
+
'linear0': nn.Linear(
|
| 169 |
+
d_token, d_hidden
|
| 170 |
+
),
|
| 171 |
+
'linear1': nn.Linear(d_hidden, d_token),
|
| 172 |
+
'norm1': make_normalization(),
|
| 173 |
+
}
|
| 174 |
+
)
|
| 175 |
+
if not prenormalization or layer_idx:
|
| 176 |
+
layer['norm0'] = make_normalization()
|
| 177 |
+
|
| 178 |
+
self.layers.append(layer)
|
| 179 |
+
|
| 180 |
+
self.activation = nn.ReLU()
|
| 181 |
+
self.last_activation = nn.ReLU()
|
| 182 |
+
# self.activation = lib.get_activation_fn(activation)
|
| 183 |
+
# self.last_activation = lib.get_nonglu_activation_fn(activation)
|
| 184 |
+
self.prenormalization = prenormalization
|
| 185 |
+
self.last_normalization = make_normalization() if prenormalization else None
|
| 186 |
+
self.ffn_dropout = ffn_dropout
|
| 187 |
+
self.residual_dropout = residual_dropout
|
| 188 |
+
self.head = nn.Linear(d_token, d_out)
|
| 189 |
+
|
| 190 |
+
|
| 191 |
+
def _start_residual(self, x, layer, norm_idx):
|
| 192 |
+
x_residual = x
|
| 193 |
+
if self.prenormalization:
|
| 194 |
+
norm_key = f'norm{norm_idx}'
|
| 195 |
+
if norm_key in layer:
|
| 196 |
+
x_residual = layer[norm_key](x_residual)
|
| 197 |
+
return x_residual
|
| 198 |
+
|
| 199 |
+
def _end_residual(self, x, x_residual, layer, norm_idx):
|
| 200 |
+
if self.residual_dropout:
|
| 201 |
+
x_residual = F.dropout(x_residual, self.residual_dropout, self.training)
|
| 202 |
+
x = x + x_residual
|
| 203 |
+
if not self.prenormalization:
|
| 204 |
+
x = layer[f'norm{norm_idx}'](x)
|
| 205 |
+
return x
|
| 206 |
+
|
| 207 |
+
def forward(self, x):
|
| 208 |
+
for layer_idx, layer in enumerate(self.layers):
|
| 209 |
+
is_last_layer = layer_idx + 1 == len(self.layers)
|
| 210 |
+
|
| 211 |
+
x_residual = self._start_residual(x, layer, 0)
|
| 212 |
+
x_residual = layer['attention'](
|
| 213 |
+
# for the last attention, it is enough to process only [CLS]
|
| 214 |
+
x_residual,
|
| 215 |
+
x_residual,
|
| 216 |
+
)
|
| 217 |
+
|
| 218 |
+
x = self._end_residual(x, x_residual, layer, 0)
|
| 219 |
+
|
| 220 |
+
x_residual = self._start_residual(x, layer, 1)
|
| 221 |
+
x_residual = layer['linear0'](x_residual)
|
| 222 |
+
x_residual = self.activation(x_residual)
|
| 223 |
+
if self.ffn_dropout:
|
| 224 |
+
x_residual = F.dropout(x_residual, self.ffn_dropout, self.training)
|
| 225 |
+
x_residual = layer['linear1'](x_residual)
|
| 226 |
+
x = self._end_residual(x, x_residual, layer, 1)
|
| 227 |
+
return x
|
| 228 |
+
|
| 229 |
+
|
| 230 |
+
class Reconstructor(nn.Module):
|
| 231 |
+
def __init__(self, d_numerical, categories, d_token):
|
| 232 |
+
super(Reconstructor, self).__init__()
|
| 233 |
+
|
| 234 |
+
self.d_numerical = d_numerical
|
| 235 |
+
self.categories = categories
|
| 236 |
+
self.d_token = d_token
|
| 237 |
+
|
| 238 |
+
self.weight = nn.Parameter(Tensor(d_numerical, d_token))
|
| 239 |
+
nn.init.xavier_uniform_(self.weight, gain=1 / math.sqrt(2))
|
| 240 |
+
self.cat_recons = nn.ModuleList()
|
| 241 |
+
|
| 242 |
+
for d in categories:
|
| 243 |
+
recon = nn.Linear(d_token, d)
|
| 244 |
+
nn.init.xavier_uniform_(recon.weight, gain=1 / math.sqrt(2))
|
| 245 |
+
self.cat_recons.append(recon)
|
| 246 |
+
|
| 247 |
+
def forward(self, h):
|
| 248 |
+
h_num = h[:, :self.d_numerical]
|
| 249 |
+
h_cat = h[:, self.d_numerical:]
|
| 250 |
+
|
| 251 |
+
recon_x_num = torch.mul(h_num, self.weight.unsqueeze(0)).sum(-1)
|
| 252 |
+
recon_x_cat = []
|
| 253 |
+
|
| 254 |
+
for i, recon in enumerate(self.cat_recons):
|
| 255 |
+
|
| 256 |
+
recon_x_cat.append(recon(h_cat[:, i]))
|
| 257 |
+
|
| 258 |
+
return recon_x_num, recon_x_cat
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/all_results.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9d134294203446e03592901f16dfcb205ca970f48310268d1fd120cd162fba87
|
| 3 |
+
size 130
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/all_results.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c56427721b0ebf830b49ad9e3f89cc818098b6ddb67b9cf019a593cc8f70f8b6
|
| 3 |
+
size 131
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/samples.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9faa0e91674299ec62cf79064ed8f3a0d3e29f58149aad189b63f0060bbd608c
|
| 3 |
+
size 2733807
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/shapes.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c6208e0cf0757e538851cad7cf631184fe4b7dd50f5206c3562b767ef57c65a1
|
| 3 |
+
size 638
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/ema/trends.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0e2988b7a3c7ebe13fa3947a81eec36d606336e75d3d986d054dad5305850d73
|
| 3 |
+
size 7899
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/samples.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5f5467e7cf2f62e55fbc0df78de3cb40d653f8e826318d94a29a811565a4ab9c
|
| 3 |
+
size 2683271
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/shapes.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:b9117583c0df1166a9a11decb1953ad0151eb0ab841a11bc92ab27411e2c67f5
|
| 3 |
+
size 637
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/result/pipeline_c19/adapter_learnable/200/trends.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:29465892f0e47ce5eb5a0738d5fc1d3d12422ce3b40a23a70b846c464127c2f0
|
| 3 |
+
size 7744
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/tabdiff/trainer.py
ADDED
|
@@ -0,0 +1,657 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
import os
|
| 2 |
+
import glob
|
| 3 |
+
import time
|
| 4 |
+
import torch
|
| 5 |
+
from torch.optim.lr_scheduler import ReduceLROnPlateau
|
| 6 |
+
import numpy as np
|
| 7 |
+
import pandas as pd
|
| 8 |
+
import json
|
| 9 |
+
|
| 10 |
+
from copy import deepcopy
|
| 11 |
+
|
| 12 |
+
from utils_train import update_ema
|
| 13 |
+
|
| 14 |
+
from tqdm import tqdm
|
| 15 |
+
|
| 16 |
+
BAR = "=============="
|
| 17 |
+
def print_with_bar(log_msg):
|
| 18 |
+
log_msg = BAR + log_msg + BAR
|
| 19 |
+
if "End" in log_msg:
|
| 20 |
+
log_msg += "\n"
|
| 21 |
+
print(log_msg)
|
| 22 |
+
|
| 23 |
+
class Trainer:
|
| 24 |
+
def __init__(
|
| 25 |
+
self, diffusion, train_iter, dataset, test_dataset, metrics, logger,
|
| 26 |
+
lr, weight_decay,
|
| 27 |
+
steps, batch_size, check_val_every,
|
| 28 |
+
sample_batch_size, model_save_path, result_save_path,
|
| 29 |
+
num_samples_to_generate=None,
|
| 30 |
+
lr_scheduler='reduce_lr_on_plateau',
|
| 31 |
+
reduce_lr_patience=100, factor=0.9,
|
| 32 |
+
ema_decay=0.997,
|
| 33 |
+
closs_weight_schedule = "fixed",
|
| 34 |
+
c_lambda = 1.0,
|
| 35 |
+
d_lambda = 1.0,
|
| 36 |
+
device=torch.device('cuda:1'),
|
| 37 |
+
ckpt_path = None,
|
| 38 |
+
y_only=False,
|
| 39 |
+
**kwargs
|
| 40 |
+
):
|
| 41 |
+
self.y_only = y_only
|
| 42 |
+
self.diffusion = diffusion
|
| 43 |
+
self.ema_model = deepcopy(self.diffusion._denoise_fn)
|
| 44 |
+
for param in self.ema_model.parameters():
|
| 45 |
+
param.detach_()
|
| 46 |
+
self.ema_num_schedule = deepcopy(self.diffusion.num_schedule)
|
| 47 |
+
for param in self.ema_num_schedule.parameters():
|
| 48 |
+
param.detach_()
|
| 49 |
+
self.ema_cat_schedule = deepcopy(self.diffusion.cat_schedule)
|
| 50 |
+
for param in self.ema_cat_schedule.parameters():
|
| 51 |
+
param.detach_()
|
| 52 |
+
|
| 53 |
+
self.train_iter = train_iter
|
| 54 |
+
self.dataset = dataset
|
| 55 |
+
self.test_dataset = test_dataset
|
| 56 |
+
self.steps = steps
|
| 57 |
+
self.init_lr = lr
|
| 58 |
+
self.optimizer = torch.optim.AdamW(self.diffusion.parameters(), lr=lr, weight_decay=weight_decay)
|
| 59 |
+
self.ema_decay = ema_decay
|
| 60 |
+
self.lr_scheduler = lr_scheduler
|
| 61 |
+
# PyTorch >= 2.8: ReduceLROnPlateau no longer accepts `verbose=`
|
| 62 |
+
self.scheduler = ReduceLROnPlateau(
|
| 63 |
+
self.optimizer, mode="min", factor=factor, patience=reduce_lr_patience
|
| 64 |
+
)
|
| 65 |
+
self.closs_weight_schedule = closs_weight_schedule
|
| 66 |
+
self.c_lambda = c_lambda
|
| 67 |
+
self.d_lambda = d_lambda
|
| 68 |
+
|
| 69 |
+
self.batch_size = batch_size
|
| 70 |
+
self.sample_batch_size = sample_batch_size
|
| 71 |
+
self.num_samples_to_generate = num_samples_to_generate
|
| 72 |
+
self.metrics = metrics
|
| 73 |
+
self.logger = logger
|
| 74 |
+
self.check_val_every = check_val_every
|
| 75 |
+
|
| 76 |
+
self.device = device
|
| 77 |
+
self.model_save_path = model_save_path
|
| 78 |
+
self.result_save_path = result_save_path
|
| 79 |
+
self.ckpt_path = ckpt_path
|
| 80 |
+
if self.ckpt_path is not None:
|
| 81 |
+
state_dicts = torch.load(self.ckpt_path, map_location=self.device)
|
| 82 |
+
self.diffusion._denoise_fn.load_state_dict(state_dicts['denoise_fn'])
|
| 83 |
+
self.diffusion.num_schedule.load_state_dict(state_dicts['num_schedule'])
|
| 84 |
+
self.diffusion.cat_schedule.load_state_dict(state_dicts['cat_schedule'])
|
| 85 |
+
print(f"Weights are loaded from {self.ckpt_path}")
|
| 86 |
+
|
| 87 |
+
self.curr_epoch = int(os.path.basename(self.ckpt_path).split('_')[-1].split('.')[0]) if self.ckpt_path is not None else 0
|
| 88 |
+
|
| 89 |
+
def _anneal_lr(self, step):
|
| 90 |
+
frac_done = step / self.steps
|
| 91 |
+
lr = self.init_lr * (1 - frac_done)
|
| 92 |
+
for param_group in self.optimizer.param_groups:
|
| 93 |
+
param_group["lr"] = lr
|
| 94 |
+
|
| 95 |
+
def _run_step(self, x, closs_weight, dloss_weight):
|
| 96 |
+
x = x.to(self.device)
|
| 97 |
+
|
| 98 |
+
self.diffusion.train()
|
| 99 |
+
|
| 100 |
+
self.optimizer.zero_grad()
|
| 101 |
+
|
| 102 |
+
dloss, closs = self.diffusion.mixed_loss(x)
|
| 103 |
+
|
| 104 |
+
loss = dloss_weight * dloss + closs_weight * closs
|
| 105 |
+
loss.backward()
|
| 106 |
+
self.optimizer.step()
|
| 107 |
+
|
| 108 |
+
return dloss, closs
|
| 109 |
+
|
| 110 |
+
def compute_loss(self): # eval loss is not weighted
|
| 111 |
+
curr_dloss = 0.0
|
| 112 |
+
curr_closs = 0.0
|
| 113 |
+
curr_count = 0
|
| 114 |
+
data_iter = self.train_iter
|
| 115 |
+
for batch in data_iter:
|
| 116 |
+
x = batch.float().to(self.device)
|
| 117 |
+
self.diffusion.eval()
|
| 118 |
+
with torch.no_grad():
|
| 119 |
+
batch_dloss, batch_closs = self.diffusion.mixed_loss(x)
|
| 120 |
+
curr_dloss += batch_dloss.item() * len(x)
|
| 121 |
+
curr_closs += batch_closs.item() * len(x)
|
| 122 |
+
curr_count += len(x)
|
| 123 |
+
mloss = np.around(curr_dloss / curr_count, 4)
|
| 124 |
+
gloss = np.around(curr_closs / curr_count, 4)
|
| 125 |
+
return mloss, gloss
|
| 126 |
+
|
| 127 |
+
def run_loop(self):
|
| 128 |
+
patience = 0
|
| 129 |
+
closs_weight, dloss_weight = self.c_lambda, self.d_lambda
|
| 130 |
+
best_loss = np.inf
|
| 131 |
+
best_ema_loss = np.inf
|
| 132 |
+
best_val_loss = np.inf
|
| 133 |
+
start_time = time.time()
|
| 134 |
+
print_with_bar(f"Starting Trainin Loop, total number of epoch = {self.steps}")
|
| 135 |
+
# Set up wandb's step metric
|
| 136 |
+
self.logger.define_metric("epoch")
|
| 137 |
+
self.logger.define_metric("*", step_metric="epoch")
|
| 138 |
+
|
| 139 |
+
start_epoch = self.curr_epoch
|
| 140 |
+
if start_epoch > 0:
|
| 141 |
+
print_with_bar(f"Resuming training from epoch {start_epoch}, with validation check every {self.check_val_every} epoches")
|
| 142 |
+
for epoch in range (start_epoch, self.steps):
|
| 143 |
+
self.curr_epoch = epoch+1
|
| 144 |
+
# Set up pbar
|
| 145 |
+
pbar = tqdm(self.train_iter, total=len(self.train_iter))
|
| 146 |
+
pbar.set_description(f"Epoch {epoch+1}/{self.steps}")
|
| 147 |
+
|
| 148 |
+
# Compute the loss weights
|
| 149 |
+
if self.closs_weight_schedule == "fixed":
|
| 150 |
+
pass
|
| 151 |
+
elif self.closs_weight_schedule == "anneal":
|
| 152 |
+
frac_done = epoch / self.steps
|
| 153 |
+
closs_weight = self.c_lambda * (1 - frac_done)
|
| 154 |
+
else:
|
| 155 |
+
raise NotImplementedError(f"The continuous loss weight schedule {self.closs_weight_schedule} is not implemneted")
|
| 156 |
+
|
| 157 |
+
# Training Step
|
| 158 |
+
curr_dloss = 0.0
|
| 159 |
+
curr_closs = 0.0
|
| 160 |
+
curr_count = 0
|
| 161 |
+
curr_lr = self.optimizer.param_groups[0]['lr']
|
| 162 |
+
for batch in pbar:
|
| 163 |
+
x = batch.float().to(self.device)
|
| 164 |
+
batch_dloss, batch_closs = self._run_step(x, closs_weight, dloss_weight)
|
| 165 |
+
curr_dloss += batch_dloss.item() * len(x)
|
| 166 |
+
curr_closs += batch_closs.item() * len(x)
|
| 167 |
+
curr_count += len(x)
|
| 168 |
+
pbar.set_postfix({
|
| 169 |
+
"lr": curr_lr,
|
| 170 |
+
"DLoss": np.around(curr_dloss/curr_count, 4),
|
| 171 |
+
"CLoss": np.around(curr_closs/curr_count, 4),
|
| 172 |
+
"TotalLoss": np.around((curr_dloss + curr_closs)/curr_count, 4),
|
| 173 |
+
"closs_weight": closs_weight,
|
| 174 |
+
"dloss_weight": dloss_weight,
|
| 175 |
+
})
|
| 176 |
+
|
| 177 |
+
# Log training Loss
|
| 178 |
+
log_dict = {}
|
| 179 |
+
mloss = np.around(curr_dloss / curr_count, 4)
|
| 180 |
+
gloss = np.around(curr_closs / curr_count, 4)
|
| 181 |
+
total_loss = mloss + gloss
|
| 182 |
+
if np.isnan(gloss):
|
| 183 |
+
print('Finding Nan in gaussian loss')
|
| 184 |
+
break
|
| 185 |
+
loss_dict = {
|
| 186 |
+
"epoch": epoch + 1,
|
| 187 |
+
"lr": curr_lr,
|
| 188 |
+
"closs_weight": closs_weight,
|
| 189 |
+
"dloss_weight": dloss_weight,
|
| 190 |
+
"loss/c_loss": gloss,
|
| 191 |
+
"loss/d_loss": mloss,
|
| 192 |
+
"loss/total_loss": total_loss
|
| 193 |
+
}
|
| 194 |
+
log_dict.update(loss_dict)
|
| 195 |
+
|
| 196 |
+
# Log the learned noise schedules for numerical dimensions
|
| 197 |
+
if self.dataset.d_numerical > 0: # numerical data is not empty
|
| 198 |
+
num_noise_dict = {}
|
| 199 |
+
if self.diffusion.num_schedule.rho().dim() == 0: # non-learnable num schedule
|
| 200 |
+
num_noise_dict = {"num_noise/rho": self.diffusion.num_schedule.rho().item()}
|
| 201 |
+
else:
|
| 202 |
+
num_noise_dict = {f"num_noise/rho_col_{i}": value.item() for i, value in enumerate(self.diffusion.num_schedule.rho())}
|
| 203 |
+
log_dict.update(num_noise_dict)
|
| 204 |
+
|
| 205 |
+
# Log the learned noise schedules for categlrical dimensions
|
| 206 |
+
if len(self.dataset.categories) > 0: # categorical data is not empty
|
| 207 |
+
cat_noise_dict = {}
|
| 208 |
+
if self.diffusion.cat_schedule.k().dim() == 0: # non-learnable cat schedule
|
| 209 |
+
cat_noise_dict = {"cat_noise/k": self.diffusion.cat_schedule.k().item()}
|
| 210 |
+
else:
|
| 211 |
+
cat_noise_dict = {f"cat_noise/k_col_{i}": value.item() for i, value in enumerate(self.diffusion.cat_schedule.k())}
|
| 212 |
+
log_dict.update(cat_noise_dict)
|
| 213 |
+
|
| 214 |
+
# Adjust learning rate
|
| 215 |
+
if self.lr_scheduler == 'reduce_lr_on_plateau':
|
| 216 |
+
self.scheduler.step(total_loss)
|
| 217 |
+
elif self.lr_scheduler == 'anneal':
|
| 218 |
+
self._anneal_lr(epoch)
|
| 219 |
+
elif self.lr_scheduler == 'fixed':
|
| 220 |
+
pass
|
| 221 |
+
else:
|
| 222 |
+
raise NotImplementedError(f"LR scheduler with name '{self.lr_scheduler}' is not implemented")
|
| 223 |
+
|
| 224 |
+
# Update EMA models
|
| 225 |
+
update_ema(self.ema_model.parameters(), self.diffusion._denoise_fn.parameters(), rate=self.ema_decay)
|
| 226 |
+
update_ema(self.ema_num_schedule.parameters(), self.diffusion.num_schedule.parameters(), rate=self.ema_decay)
|
| 227 |
+
update_ema(self.ema_cat_schedule.parameters(), self.diffusion.cat_schedule.parameters(), rate=self.ema_decay)
|
| 228 |
+
|
| 229 |
+
# Save ckpt base on the best training loss
|
| 230 |
+
if total_loss < best_loss and self.curr_epoch > 4000:
|
| 231 |
+
best_loss = total_loss
|
| 232 |
+
to_remove = glob.glob(os.path.join(self.model_save_path, f"best_model_*"))
|
| 233 |
+
if to_remove:
|
| 234 |
+
os.remove(to_remove[0])
|
| 235 |
+
state_dicts = {
|
| 236 |
+
'denoise_fn': self.diffusion._denoise_fn.state_dict(),
|
| 237 |
+
'num_schedule':self.diffusion.num_schedule.state_dict(),
|
| 238 |
+
'cat_schedule': self.diffusion.cat_schedule.state_dict(),
|
| 239 |
+
}
|
| 240 |
+
torch.save(state_dicts, os.path.join(self.model_save_path, f'best_model_{np.round(total_loss,4)}_{epoch+1}.pt'))
|
| 241 |
+
patience = 0
|
| 242 |
+
else:
|
| 243 |
+
patience += 1 # increment patience if best loss is not surpassed
|
| 244 |
+
|
| 245 |
+
# Compute and log EMA model loss
|
| 246 |
+
curr_model, curr_num_schedule, curr_cat_schedule = self.to_ema_model()
|
| 247 |
+
ema_mloss, ema_gloss = self.compute_loss()
|
| 248 |
+
self.to_model(curr_model, curr_num_schedule, curr_cat_schedule)
|
| 249 |
+
ema_total_loss = ema_mloss + ema_gloss
|
| 250 |
+
ema_loss_dict = {
|
| 251 |
+
"ema_loss/c_loss": ema_gloss,
|
| 252 |
+
"ema_loss/d_loss": ema_mloss,
|
| 253 |
+
"ema_loss/total_loss": ema_total_loss
|
| 254 |
+
}
|
| 255 |
+
|
| 256 |
+
# Save the best ema ckpt
|
| 257 |
+
if ema_total_loss < best_ema_loss and self.curr_epoch > 4000:
|
| 258 |
+
best_ema_loss = ema_total_loss
|
| 259 |
+
to_remove = glob.glob(os.path.join(self.model_save_path, f"best_ema_model_*"))
|
| 260 |
+
if to_remove:
|
| 261 |
+
os.remove(to_remove[0])
|
| 262 |
+
state_dicts = {
|
| 263 |
+
'denoise_fn': self.ema_model.state_dict(),
|
| 264 |
+
'num_schedule':self.ema_num_schedule.state_dict(),
|
| 265 |
+
'cat_schedule': self.ema_cat_schedule.state_dict(),
|
| 266 |
+
}
|
| 267 |
+
torch.save(state_dicts, os.path.join(self.model_save_path, f'best_ema_model_{np.round(ema_total_loss,4)}_{epoch+1}.pt'))
|
| 268 |
+
|
| 269 |
+
# Evaluate Sample Quality
|
| 270 |
+
if (epoch+1) % self.check_val_every == 0:
|
| 271 |
+
state_dicts = {
|
| 272 |
+
'denoise_fn': self.diffusion._denoise_fn.state_dict(),
|
| 273 |
+
'num_schedule':self.diffusion.num_schedule.state_dict(),
|
| 274 |
+
'cat_schedule': self.diffusion.cat_schedule.state_dict(),
|
| 275 |
+
}
|
| 276 |
+
torch.save(state_dicts, os.path.join(self.model_save_path, f'model_{epoch+1}.pt'))
|
| 277 |
+
|
| 278 |
+
print_with_bar(f"Routine Generation Evaluation every {self.check_val_every}, currently at epoch #{epoch+1}, wiht total_loss={total_loss}.")
|
| 279 |
+
# 适配器训练:容器内无 Chrome,跳过 Kaleido 密度图
|
| 280 |
+
_plot_density = os.environ.get("TABDIFF_ADAPTER_TRAIN", "").strip().lower() not in ("1", "true", "yes")
|
| 281 |
+
out_metrics, _, _ = self.evaluate_generation(save_metric_details=True, plot_density=_plot_density)
|
| 282 |
+
log_dict.update(out_metrics)
|
| 283 |
+
print(f"Eval Resutls of the Non-EMA model:\n {out_metrics}")
|
| 284 |
+
|
| 285 |
+
# Evaluate the EMA model
|
| 286 |
+
torch.save(self.ema_model.state_dict(), os.path.join(self.model_save_path, f'ema_model_{epoch+1}.pt'))
|
| 287 |
+
ema_out_metrics, _, _ = self.evaluate_generation(ema=True, save_metric_details=True, plot_density=_plot_density)
|
| 288 |
+
log_dict.update({
|
| 289 |
+
"ema": ema_out_metrics,
|
| 290 |
+
})
|
| 291 |
+
print(f"Eval Resutls of the EMA model:\n {ema_out_metrics}")
|
| 292 |
+
|
| 293 |
+
# Submit logs
|
| 294 |
+
self.logger.log(log_dict)
|
| 295 |
+
|
| 296 |
+
end_time = time.time()
|
| 297 |
+
print_with_bar(f"Ending Trainnig Loop, totoal training time = {end_time - start_time}")
|
| 298 |
+
self.logger.log({
|
| 299 |
+
'training_time': end_time - start_time
|
| 300 |
+
})
|
| 301 |
+
|
| 302 |
+
def report_test(self, num_runs):
|
| 303 |
+
save_dir = self.result_save_path
|
| 304 |
+
|
| 305 |
+
shape_ = []
|
| 306 |
+
trend_ = []
|
| 307 |
+
mle_ = []
|
| 308 |
+
c2st_ = []
|
| 309 |
+
for i in range(num_runs):
|
| 310 |
+
print_with_bar(f"GENERAL Evaluation Run {i}")
|
| 311 |
+
out_metrics, extras, syn_df = self.evaluate_generation()
|
| 312 |
+
print(f"Results of Run {i} are: \n{out_metrics}")
|
| 313 |
+
shape_.append(out_metrics["density/Shape"])
|
| 314 |
+
trend_.append(out_metrics["density/Trend"])
|
| 315 |
+
mle_.append(out_metrics["mle"])
|
| 316 |
+
c2st_.append(out_metrics["c2st"])
|
| 317 |
+
# Save samples for quality evaluation
|
| 318 |
+
save_path = os.path.join(save_dir, "all_samples")
|
| 319 |
+
if not os.path.exists(save_path):
|
| 320 |
+
os.makedirs(save_path)
|
| 321 |
+
syn_df.to_csv(os.path.join(save_path, f"samples_{i}.csv"), index=False)
|
| 322 |
+
|
| 323 |
+
shape_ = np.array(shape_)
|
| 324 |
+
trend_ = np.array(trend_)
|
| 325 |
+
mle_ = np.array(mle_)
|
| 326 |
+
c2st_ = np.array(c2st_)
|
| 327 |
+
|
| 328 |
+
shape_error = (1 - shape_)*100
|
| 329 |
+
trend_error = (1 - trend_)*100
|
| 330 |
+
c2st_percent = c2st_ * 100
|
| 331 |
+
|
| 332 |
+
all_results = pd.DataFrame({
|
| 333 |
+
"shape": shape_error,
|
| 334 |
+
"trend": trend_error,
|
| 335 |
+
"mle": mle_,
|
| 336 |
+
"c2st": c2st_percent,
|
| 337 |
+
})
|
| 338 |
+
avg = all_results.mean(axis=0).round(3)
|
| 339 |
+
std = all_results.std(axis=0).round(3)
|
| 340 |
+
avg_std = pd.concat([avg, std], axis=1, ignore_index=True)
|
| 341 |
+
avg_std.columns = ["avg", "std"]
|
| 342 |
+
avg_std.index = [
|
| 343 |
+
"shape",
|
| 344 |
+
"trend",
|
| 345 |
+
"mle",
|
| 346 |
+
"c2st",
|
| 347 |
+
]
|
| 348 |
+
|
| 349 |
+
# Savings
|
| 350 |
+
all_results.to_csv(f"{save_dir}/all_results.csv", index=True)
|
| 351 |
+
avg_std.to_csv(f"{save_dir}/avg_std.csv", index=True)
|
| 352 |
+
print_with_bar(f"The AVG over {num_runs} runs are: \n{avg_std}")
|
| 353 |
+
|
| 354 |
+
def report_test_dcr(self, num_runs):
|
| 355 |
+
save_dir = self.result_save_path
|
| 356 |
+
|
| 357 |
+
dcr_ = []
|
| 358 |
+
dcr_real_ = []
|
| 359 |
+
dcr_test_ = []
|
| 360 |
+
for i in range(num_runs):
|
| 361 |
+
print_with_bar(f"DCR Evaluation Run {i}")
|
| 362 |
+
out_metrics, extras, syn_df = self.evaluate_generation()
|
| 363 |
+
print(f"Results of Run {i} are: \n{out_metrics}")
|
| 364 |
+
dcr_.append(out_metrics["dcr"])
|
| 365 |
+
dcr_real_.append(extras["dcr_real"])
|
| 366 |
+
dcr_test_.append(extras["dcr_test"])
|
| 367 |
+
save_path = os.path.join(save_dir, "all_samples")
|
| 368 |
+
if not os.path.exists(save_path):
|
| 369 |
+
os.makedirs(save_path)
|
| 370 |
+
syn_df.to_csv(os.path.join(save_path, f"samples_{i}.csv"), index=False)
|
| 371 |
+
|
| 372 |
+
dcr_ = np.array(dcr_)
|
| 373 |
+
|
| 374 |
+
dcr_percent = dcr_ * 100
|
| 375 |
+
|
| 376 |
+
all_results = pd.DataFrame({
|
| 377 |
+
"dcr": dcr_percent,
|
| 378 |
+
})
|
| 379 |
+
avg = all_results.mean(axis=0).round(3)
|
| 380 |
+
std = all_results.std(axis=0).round(3)
|
| 381 |
+
avg_std = pd.concat([avg, std], axis=1, ignore_index=True)
|
| 382 |
+
avg_std.columns = ["avg", "std"]
|
| 383 |
+
avg_std.index = [
|
| 384 |
+
"dcr",
|
| 385 |
+
]
|
| 386 |
+
|
| 387 |
+
# Savings
|
| 388 |
+
all_results.to_csv(f"{save_dir}/all_results.csv", index=True)
|
| 389 |
+
avg_std.to_csv(f"{save_dir}/avg_std.csv", index=True)
|
| 390 |
+
dcr_real = np.concatenate(dcr_real_, axis=0)
|
| 391 |
+
dcr_test = np.concatenate(dcr_test_, axis=0)
|
| 392 |
+
dcr_df = pd.DataFrame({
|
| 393 |
+
"dcr_real": dcr_real,
|
| 394 |
+
"dcr_test": dcr_test
|
| 395 |
+
})
|
| 396 |
+
dcr_df.to_csv(f"{save_dir}/dcr.csv", index=False)
|
| 397 |
+
|
| 398 |
+
print_with_bar(f"The AVG over {num_runs} runs are: \n{avg_std}")
|
| 399 |
+
|
| 400 |
+
def test(self):
|
| 401 |
+
_plot_density = os.environ.get("TABDIFF_ADAPTER_TRAIN", "").strip().lower() not in ("1", "true", "yes")
|
| 402 |
+
out_metrics, _, _ = self.evaluate_generation(save_metric_details=True, plot_density=_plot_density)
|
| 403 |
+
print_with_bar(f"Results of the test are: \n{out_metrics}")
|
| 404 |
+
self.logger.log(out_metrics)
|
| 405 |
+
print(out_metrics)
|
| 406 |
+
|
| 407 |
+
def evaluate_generation(self, save_metric_details=False, plot_density=False, ema=False):
|
| 408 |
+
self.diffusion.eval()
|
| 409 |
+
|
| 410 |
+
# Sample a synthetic table
|
| 411 |
+
num_samples = self.num_samples_to_generate if self.num_samples_to_generate else self.metrics.real_data_size # By default, num_samples_to_generate is not specified. In this case, we generate the same number of samples as the real dataset. This approach is consistently used across all experiments in the paper.
|
| 412 |
+
syn_df = self.sample_synthetic(num_samples, ema=ema)
|
| 413 |
+
|
| 414 |
+
# Save the sample
|
| 415 |
+
save_path = os.path.join(self.result_save_path, str(self.curr_epoch), "ema" if ema else "")
|
| 416 |
+
if not os.path.exists(save_path):
|
| 417 |
+
os.makedirs(save_path)
|
| 418 |
+
path = os.path.join(save_path, "samples.csv")
|
| 419 |
+
syn_df.to_csv(path, index=False)
|
| 420 |
+
print(
|
| 421 |
+
f"Samples are saved at {path}"
|
| 422 |
+
)
|
| 423 |
+
|
| 424 |
+
# 流水线仅需要 CSV:跳过 MLE/C2ST 等(合成表为字符串类别时 MLE 会报错)
|
| 425 |
+
if os.environ.get("TABDIFF_ADAPTER_SAMPLE_ONLY", "").strip().lower() in ("1", "true", "yes"):
|
| 426 |
+
return {}, {}, syn_df
|
| 427 |
+
|
| 428 |
+
# Compute evaluation metrics on the sample
|
| 429 |
+
syn_df_loaded = pd.read_csv(os.path.join(save_path, "samples.csv")) # In the original tabsyn code, syn_data is implicitly casted into float.64 when it gets loaded with pd.read_csv in the evaluation script. If we don't cast, the density evluation for some columns (especially those with tailed and peaked distribution) will collapse.
|
| 430 |
+
out_metrics, extras = self.metrics.evaluate(syn_df_loaded)
|
| 431 |
+
|
| 432 |
+
# Save metrics and metric details
|
| 433 |
+
path = os.path.join(save_path, "all_results.json")
|
| 434 |
+
with open(path, "w") as json_file:
|
| 435 |
+
json.dump(out_metrics, json_file, indent=4, separators=(", ", ": ")) # always locally save the output metrics
|
| 436 |
+
if save_metric_details:
|
| 437 |
+
for name, extra in extras.items():
|
| 438 |
+
if isinstance(extra, pd.DataFrame):
|
| 439 |
+
extra.to_csv(os.path.join(save_path, f"{name}.csv"))
|
| 440 |
+
elif isinstance(extra, dict):
|
| 441 |
+
with open(os.path.join(save_path, f"{name}.json"), "w") as json_file:
|
| 442 |
+
json.dump(extra, json_file, indent=4, separators=(", ", ": "))
|
| 443 |
+
else:
|
| 444 |
+
raise NotImplementedError(f"Extra file generated during evaluations has type {type(extra)}, and code to save this type of file is not implemented")
|
| 445 |
+
|
| 446 |
+
# Plot density figures
|
| 447 |
+
if plot_density:
|
| 448 |
+
img = self.metrics.plot_density(syn_df_loaded)
|
| 449 |
+
path = os.path.join(save_path, "density_plots.png")
|
| 450 |
+
img.save(path)
|
| 451 |
+
print(
|
| 452 |
+
f"The density plots are saved at {path}"
|
| 453 |
+
)
|
| 454 |
+
return out_metrics, extras, syn_df
|
| 455 |
+
|
| 456 |
+
|
| 457 |
+
def sample_synthetic(self, num_samples, keep_nan_samples=True, ema=False):
|
| 458 |
+
if ema:
|
| 459 |
+
curr_model, curr_num_schedule, curr_cat_schedule = self.to_ema_model()
|
| 460 |
+
info = self.metrics.info
|
| 461 |
+
|
| 462 |
+
print_with_bar(f"Starting Sampling, total samples to generate = {num_samples}")
|
| 463 |
+
start_time = time.time()
|
| 464 |
+
|
| 465 |
+
syn_data = self.diffusion.sample_all(num_samples, self.sample_batch_size, keep_nan_samples=keep_nan_samples)
|
| 466 |
+
print(f"Shape of the generated sample = {syn_data.shape}")
|
| 467 |
+
|
| 468 |
+
if keep_nan_samples:
|
| 469 |
+
num_all_zero_row = (syn_data.sum(dim=1) == 0).sum()
|
| 470 |
+
if num_all_zero_row:
|
| 471 |
+
print(f"The generated samples contain {num_all_zero_row} Nan instances!!!")
|
| 472 |
+
self.logger.log({
|
| 473 |
+
'num_Nan_sample': num_all_zero_row
|
| 474 |
+
})
|
| 475 |
+
|
| 476 |
+
# Recover tables
|
| 477 |
+
num_inverse = self.dataset.num_inverse
|
| 478 |
+
int_inverse = self.dataset.int_inverse
|
| 479 |
+
cat_inverse = self.dataset.cat_inverse
|
| 480 |
+
|
| 481 |
+
if self.y_only:
|
| 482 |
+
if info['task_type'] == 'binclass':
|
| 483 |
+
syn_data = cat_inverse(syn_data)
|
| 484 |
+
else:
|
| 485 |
+
syn_data = num_inverse(syn_data)
|
| 486 |
+
syn_df = pd.DataFrame()
|
| 487 |
+
syn_df[info['column_names'][info['target_col_idx'][0]]] = syn_data[:, 0]
|
| 488 |
+
else:
|
| 489 |
+
syn_num, syn_cat, syn_target = split_num_cat_target(syn_data, info, num_inverse, int_inverse, cat_inverse)
|
| 490 |
+
syn_df = recover_data(syn_num, syn_cat, syn_target, info)
|
| 491 |
+
|
| 492 |
+
|
| 493 |
+
idx_name_mapping = info['idx_name_mapping']
|
| 494 |
+
idx_name_mapping = {int(key): value for key, value in idx_name_mapping.items()}
|
| 495 |
+
|
| 496 |
+
syn_df.rename(columns = idx_name_mapping, inplace=True)
|
| 497 |
+
|
| 498 |
+
end_time = time.time()
|
| 499 |
+
print_with_bar(f"Ending Sampling, totoal sampling time = {end_time - start_time}")
|
| 500 |
+
|
| 501 |
+
if ema:
|
| 502 |
+
self.to_model(curr_model, curr_num_schedule, curr_cat_schedule)
|
| 503 |
+
|
| 504 |
+
return syn_df
|
| 505 |
+
|
| 506 |
+
def to_ema_model(self):
|
| 507 |
+
curr_model = self.diffusion._denoise_fn
|
| 508 |
+
curr_num_schedule = self.diffusion.num_schedule
|
| 509 |
+
curr_cat_schedule = self.diffusion.cat_schedule
|
| 510 |
+
self.diffusion._denoise_fn = self.ema_model # temporarily install the ema parameters into the model
|
| 511 |
+
self.diffusion.num_schedule = self.ema_num_schedule
|
| 512 |
+
self.diffusion.cat_schedule = self.ema_cat_schedule
|
| 513 |
+
|
| 514 |
+
return curr_model, curr_num_schedule, curr_cat_schedule
|
| 515 |
+
|
| 516 |
+
def to_model(self, curr_model, curr_num_schedule, curr_cat_schedule):
|
| 517 |
+
self.diffusion._denoise_fn = curr_model # give back the parameters
|
| 518 |
+
self.diffusion.num_schedule = curr_num_schedule
|
| 519 |
+
self.diffusion.cat_schedule = curr_cat_schedule
|
| 520 |
+
|
| 521 |
+
def test_impute(self, trail_start, trial_size, resample_rounds, impute_condition, imputed_sample_save_dir, w_num, w_cat):
|
| 522 |
+
self.diffusion.eval()
|
| 523 |
+
|
| 524 |
+
info = self.metrics.info
|
| 525 |
+
task_type = info['task_type']
|
| 526 |
+
d_numerical, categories = self.dataset.d_numerical, self.dataset.categories
|
| 527 |
+
num_mask_idx, cat_mask_idx = [], []
|
| 528 |
+
X_train = self.dataset.X
|
| 529 |
+
X_train = X_train
|
| 530 |
+
x_num_train, x_cat_train = X_train[:,:d_numerical], X_train[:,d_numerical:]
|
| 531 |
+
|
| 532 |
+
if task_type == 'binclass': # for cat cols, push the masked col to [MASK]
|
| 533 |
+
cat_mask_idx += [0]
|
| 534 |
+
else: # for num cols, set the masked col to the col mean
|
| 535 |
+
num_mask_idx += [0]
|
| 536 |
+
avg = x_num_train[:, num_mask_idx].mean(0).to(self.device)
|
| 537 |
+
|
| 538 |
+
with torch.no_grad():
|
| 539 |
+
|
| 540 |
+
for trial in range(trail_start, trail_start+trial_size):
|
| 541 |
+
print_with_bar(f"Imputing trial {trial}")
|
| 542 |
+
X_test = self.test_dataset.X
|
| 543 |
+
X_test = deepcopy(X_test).to(self.device)
|
| 544 |
+
x_num_test, x_cat_test = X_test[:, :d_numerical], X_test[:, d_numerical:].long()
|
| 545 |
+
|
| 546 |
+
# Apply mask to x_0
|
| 547 |
+
if num_mask_idx:
|
| 548 |
+
x_num_test[:, num_mask_idx] = avg
|
| 549 |
+
if cat_mask_idx:
|
| 550 |
+
x_cat_test[:, cat_mask_idx] = torch.tensor(categories, dtype=x_cat_test.dtype, device=x_cat_test.device)[cat_mask_idx]
|
| 551 |
+
|
| 552 |
+
# Sample imputed tables
|
| 553 |
+
syn_data = self.diffusion.sample_impute(x_num_test, x_cat_test, num_mask_idx, cat_mask_idx, resample_rounds, impute_condition, w_num, w_cat)
|
| 554 |
+
print(f"Shape of the imputed sample = {syn_data.shape}")
|
| 555 |
+
|
| 556 |
+
# Recover tables
|
| 557 |
+
num_inverse = self.dataset.num_inverse
|
| 558 |
+
int_inverse = self.dataset.int_inverse
|
| 559 |
+
cat_inverse = self.dataset.cat_inverse
|
| 560 |
+
|
| 561 |
+
if torch.any((syn_data[:, d_numerical+1:]).max(dim=0).values > (x_cat_train[:,1:]).max(dim=0).values): # if the test set contains categories not presented in the train set, we can not do cat_inverse. So we implement a patch that set those columns to the same as the train set
|
| 562 |
+
print("Test set contains extra categories, and so does imputed syn data. We cannot do cat_inverse. So we set the cat columns as the same as the train set")
|
| 563 |
+
syn_data[:, d_numerical+1:] = x_cat_train[:syn_data.shape[0],1:]
|
| 564 |
+
|
| 565 |
+
|
| 566 |
+
syn_num, syn_cat, syn_target = split_num_cat_target(syn_data, info, num_inverse, int_inverse, cat_inverse)
|
| 567 |
+
syn_df = recover_data(syn_num, syn_cat, syn_target, info)
|
| 568 |
+
|
| 569 |
+
idx_name_mapping = info['idx_name_mapping']
|
| 570 |
+
idx_name_mapping = {int(key): value for key, value in idx_name_mapping.items()}
|
| 571 |
+
|
| 572 |
+
syn_df.rename(columns = idx_name_mapping, inplace=True)
|
| 573 |
+
|
| 574 |
+
# Save imputed samples
|
| 575 |
+
os.makedirs(imputed_sample_save_dir) if not os.path.exists(imputed_sample_save_dir) else None
|
| 576 |
+
print(f"Imputed samples are saved to {imputed_sample_save_dir}/{trial}.csv")
|
| 577 |
+
syn_df.to_csv(f'{imputed_sample_save_dir}/{trial}.csv', index = False)
|
| 578 |
+
|
| 579 |
+
def _as_numpy_float32(x):
|
| 580 |
+
"""Inverse 变换可能返回 Tensor;统一为 numpy float32(含 0 列)。"""
|
| 581 |
+
if x is None:
|
| 582 |
+
return np.array([], dtype=np.float32)
|
| 583 |
+
if isinstance(x, torch.Tensor):
|
| 584 |
+
x = x.detach().cpu().numpy()
|
| 585 |
+
return np.asarray(x, dtype=np.float32)
|
| 586 |
+
|
| 587 |
+
|
| 588 |
+
@torch.no_grad()
|
| 589 |
+
def split_num_cat_target(syn_data, info, num_inverse, int_inverse, cat_inverse):
|
| 590 |
+
task_type = info['task_type']
|
| 591 |
+
|
| 592 |
+
num_col_idx = info['num_col_idx']
|
| 593 |
+
cat_col_idx = info['cat_col_idx']
|
| 594 |
+
target_col_idx = info['target_col_idx']
|
| 595 |
+
|
| 596 |
+
n_num_feat = len(num_col_idx)
|
| 597 |
+
n_cat_feat = len(cat_col_idx)
|
| 598 |
+
|
| 599 |
+
if task_type == 'regression':
|
| 600 |
+
n_num_feat += len(target_col_idx)
|
| 601 |
+
else:
|
| 602 |
+
n_cat_feat += len(target_col_idx)
|
| 603 |
+
|
| 604 |
+
syn_num = syn_data[:, :n_num_feat]
|
| 605 |
+
syn_cat = syn_data[:, n_num_feat:]
|
| 606 |
+
|
| 607 |
+
if n_num_feat > 0:
|
| 608 |
+
syn_num = _as_numpy_float32(num_inverse(syn_num))
|
| 609 |
+
syn_num = _as_numpy_float32(int_inverse(syn_num))
|
| 610 |
+
else:
|
| 611 |
+
syn_num = np.zeros((syn_data.shape[0], 0), dtype=np.float32)
|
| 612 |
+
syn_cat = cat_inverse(syn_cat)
|
| 613 |
+
|
| 614 |
+
|
| 615 |
+
if info['task_type'] == 'regression':
|
| 616 |
+
syn_target = syn_num[:, :len(target_col_idx)]
|
| 617 |
+
syn_num = syn_num[:, len(target_col_idx):]
|
| 618 |
+
|
| 619 |
+
else:
|
| 620 |
+
print(syn_cat.shape)
|
| 621 |
+
syn_target = syn_cat[:, :len(target_col_idx)]
|
| 622 |
+
syn_cat = syn_cat[:, len(target_col_idx):]
|
| 623 |
+
|
| 624 |
+
return syn_num, syn_cat, syn_target
|
| 625 |
+
|
| 626 |
+
def recover_data(syn_num, syn_cat, syn_target, info):
|
| 627 |
+
|
| 628 |
+
num_col_idx = info['num_col_idx']
|
| 629 |
+
cat_col_idx = info['cat_col_idx']
|
| 630 |
+
target_col_idx = info['target_col_idx']
|
| 631 |
+
|
| 632 |
+
|
| 633 |
+
idx_mapping = info['idx_mapping']
|
| 634 |
+
idx_mapping = {int(key): value for key, value in idx_mapping.items()}
|
| 635 |
+
|
| 636 |
+
syn_df = pd.DataFrame()
|
| 637 |
+
|
| 638 |
+
if info['task_type'] == 'regression':
|
| 639 |
+
for i in range(len(num_col_idx) + len(cat_col_idx) + len(target_col_idx)):
|
| 640 |
+
if i in set(num_col_idx):
|
| 641 |
+
syn_df[i] = syn_num[:, idx_mapping[i]]
|
| 642 |
+
elif i in set(cat_col_idx):
|
| 643 |
+
syn_df[i] = syn_cat[:, idx_mapping[i] - len(num_col_idx)]
|
| 644 |
+
else:
|
| 645 |
+
syn_df[i] = syn_target[:, idx_mapping[i] - len(num_col_idx) - len(cat_col_idx)]
|
| 646 |
+
|
| 647 |
+
|
| 648 |
+
else:
|
| 649 |
+
for i in range(len(num_col_idx) + len(cat_col_idx) + len(target_col_idx)):
|
| 650 |
+
if i in set(num_col_idx):
|
| 651 |
+
syn_df[i] = syn_num[:, idx_mapping[i]]
|
| 652 |
+
elif i in set(cat_col_idx):
|
| 653 |
+
syn_df[i] = syn_cat[:, idx_mapping[i] - len(num_col_idx)]
|
| 654 |
+
else:
|
| 655 |
+
syn_df[i] = syn_target[:, idx_mapping[i] - len(num_col_idx) - len(cat_col_idx)]
|
| 656 |
+
|
| 657 |
+
return syn_df
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime/utils_train.py
ADDED
|
@@ -0,0 +1,193 @@
|
|
|
|
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|
|
|
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|
|
|
|
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|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import numpy as np
|
| 2 |
+
import os
|
| 3 |
+
|
| 4 |
+
import src
|
| 5 |
+
from torch.utils.data import Dataset
|
| 6 |
+
|
| 7 |
+
import torch
|
| 8 |
+
|
| 9 |
+
|
| 10 |
+
class TabularDataset(Dataset):
|
| 11 |
+
def __init__(self, X_num, X_cat):
|
| 12 |
+
self.X_num = X_num
|
| 13 |
+
self.X_cat = X_cat
|
| 14 |
+
|
| 15 |
+
def __getitem__(self, index):
|
| 16 |
+
this_num = self.X_num[index]
|
| 17 |
+
this_cat = self.X_cat[index]
|
| 18 |
+
|
| 19 |
+
sample = (this_num, this_cat)
|
| 20 |
+
|
| 21 |
+
return sample
|
| 22 |
+
|
| 23 |
+
def __len__(self):
|
| 24 |
+
return self.X_num.shape[0]
|
| 25 |
+
|
| 26 |
+
class TabDiffDataset(Dataset):
|
| 27 |
+
def __init__(self, dataname, data_dir, info, isTrain=True, y_only=False, dequant_dist='none', int_dequant_factor=0.0):
|
| 28 |
+
self.dataname = dataname
|
| 29 |
+
self.data_dir = data_dir
|
| 30 |
+
self.info = info
|
| 31 |
+
self.isTrain = isTrain
|
| 32 |
+
|
| 33 |
+
X_num, X_cat, categories, d_numerical, num_inverse, int_inverse, cat_inverse = preprocess(data_dir, y_only, dequant_dist, int_dequant_factor, task_type = info['task_type'], inverse=True)
|
| 34 |
+
categories = np.array(categories)
|
| 35 |
+
|
| 36 |
+
X_train_num, _ = X_num
|
| 37 |
+
X_train_cat, _ = X_cat
|
| 38 |
+
|
| 39 |
+
X_train_num, X_test_num = X_num
|
| 40 |
+
X_train_cat, X_test_cat = X_cat
|
| 41 |
+
|
| 42 |
+
X_train_num, X_test_num = torch.tensor(X_train_num).float(), torch.tensor(X_test_num).float()
|
| 43 |
+
X_train_cat, X_test_cat = torch.tensor(X_train_cat), torch.tensor(X_test_cat)
|
| 44 |
+
|
| 45 |
+
self.X = torch.cat((X_train_num, X_train_cat), dim=1) if isTrain else torch.cat((X_test_num, X_test_cat), dim=1)
|
| 46 |
+
self.num_inverse = num_inverse
|
| 47 |
+
self.int_inverse = int_inverse
|
| 48 |
+
self.cat_inverse = cat_inverse
|
| 49 |
+
self.d_numerical = d_numerical
|
| 50 |
+
self.categories = categories
|
| 51 |
+
|
| 52 |
+
def __getitem__(self, index):
|
| 53 |
+
return self.X[index]
|
| 54 |
+
|
| 55 |
+
def __len__(self):
|
| 56 |
+
return self.X.shape[0]
|
| 57 |
+
|
| 58 |
+
def preprocess(dataset_path, y_only=False, dequant_dist='none', int_dequant_factor=0.0, task_type = 'binclass', inverse = False, cat_encoding = None, concat = True):
|
| 59 |
+
|
| 60 |
+
T_dict = {}
|
| 61 |
+
|
| 62 |
+
T_dict['normalization'] = "quantile"
|
| 63 |
+
T_dict['num_nan_policy'] = 'mean'
|
| 64 |
+
T_dict['cat_nan_policy'] = None
|
| 65 |
+
T_dict['cat_min_frequency'] = None
|
| 66 |
+
T_dict['cat_encoding'] = cat_encoding
|
| 67 |
+
T_dict['y_policy'] = "default"
|
| 68 |
+
T_dict['dequant_dist'] = dequant_dist
|
| 69 |
+
T_dict['int_dequant_factor'] = int_dequant_factor
|
| 70 |
+
|
| 71 |
+
T = src.Transformations(**T_dict)
|
| 72 |
+
|
| 73 |
+
dataset = make_dataset(
|
| 74 |
+
data_path = dataset_path,
|
| 75 |
+
T = T,
|
| 76 |
+
task_type = task_type,
|
| 77 |
+
change_val = False,
|
| 78 |
+
concat = concat,
|
| 79 |
+
y_only = y_only,
|
| 80 |
+
)
|
| 81 |
+
|
| 82 |
+
if cat_encoding is None:
|
| 83 |
+
X_num = dataset.X_num
|
| 84 |
+
X_cat = dataset.X_cat
|
| 85 |
+
|
| 86 |
+
X_train_num, X_test_num = X_num['train'], X_num['test']
|
| 87 |
+
X_train_cat, X_test_cat = X_cat['train'], X_cat['test']
|
| 88 |
+
|
| 89 |
+
categories = src.get_categories(X_train_cat)
|
| 90 |
+
d_numerical = X_train_num.shape[1]
|
| 91 |
+
|
| 92 |
+
X_num = (X_train_num, X_test_num)
|
| 93 |
+
X_cat = (X_train_cat, X_test_cat)
|
| 94 |
+
|
| 95 |
+
|
| 96 |
+
if inverse:
|
| 97 |
+
num_inverse = dataset.num_transform.inverse_transform if dataset.num_transform is not None else lambda x: x
|
| 98 |
+
int_inverse = dataset.int_transform.inverse_transform if dataset.int_transform is not None else lambda x: x
|
| 99 |
+
cat_inverse = dataset.cat_transform.inverse_transform if dataset.cat_transform is not None else lambda x: x
|
| 100 |
+
|
| 101 |
+
return X_num, X_cat, categories, d_numerical, num_inverse, int_inverse, cat_inverse
|
| 102 |
+
else:
|
| 103 |
+
return X_num, X_cat, categories, d_numerical
|
| 104 |
+
else:
|
| 105 |
+
return dataset
|
| 106 |
+
|
| 107 |
+
|
| 108 |
+
def update_ema(target_params, source_params, rate=0.999):
|
| 109 |
+
"""
|
| 110 |
+
Update target parameters to be closer to those of source parameters using
|
| 111 |
+
an exponential moving average.
|
| 112 |
+
:param target_params: the target parameter sequence.
|
| 113 |
+
:param source_params: the source parameter sequence.
|
| 114 |
+
:param rate: the EMA rate (closer to 1 means slower).
|
| 115 |
+
"""
|
| 116 |
+
for target, source in zip(target_params, source_params):
|
| 117 |
+
target.detach().mul_(rate).add_(source.detach(), alpha=1 - rate)
|
| 118 |
+
|
| 119 |
+
|
| 120 |
+
|
| 121 |
+
def concat_y_to_X(X, y):
|
| 122 |
+
if X is None:
|
| 123 |
+
return y.reshape(-1, 1)
|
| 124 |
+
return np.concatenate([y.reshape(-1, 1), X], axis=1)
|
| 125 |
+
|
| 126 |
+
|
| 127 |
+
def make_dataset(
|
| 128 |
+
data_path: str,
|
| 129 |
+
T: src.Transformations,
|
| 130 |
+
task_type,
|
| 131 |
+
change_val: bool,
|
| 132 |
+
concat = True,
|
| 133 |
+
y_only = False,
|
| 134 |
+
):
|
| 135 |
+
|
| 136 |
+
# classification
|
| 137 |
+
if task_type == 'binclass' or task_type == 'multiclass':
|
| 138 |
+
X_cat = {} if os.path.exists(os.path.join(data_path, 'X_cat_train.npy')) else None
|
| 139 |
+
X_num = {} if os.path.exists(os.path.join(data_path, 'X_num_train.npy')) else None
|
| 140 |
+
y = {} if os.path.exists(os.path.join(data_path, 'y_train.npy')) else None
|
| 141 |
+
|
| 142 |
+
for split in ['train', 'test']:
|
| 143 |
+
X_num_t, X_cat_t, y_t = src.read_pure_data(data_path, split)
|
| 144 |
+
if y_only:
|
| 145 |
+
X_num_t = X_num_t[:, :0]
|
| 146 |
+
X_cat_t = X_cat_t[:, :0]
|
| 147 |
+
if X_num is not None:
|
| 148 |
+
X_num[split] = X_num_t
|
| 149 |
+
if X_cat is not None:
|
| 150 |
+
if concat:
|
| 151 |
+
X_cat_t = concat_y_to_X(X_cat_t, y_t)
|
| 152 |
+
X_cat[split] = X_cat_t
|
| 153 |
+
if y is not None:
|
| 154 |
+
y[split] = y_t
|
| 155 |
+
else:
|
| 156 |
+
# regression
|
| 157 |
+
X_cat = {} if os.path.exists(os.path.join(data_path, 'X_cat_train.npy')) else None
|
| 158 |
+
X_num = {} if os.path.exists(os.path.join(data_path, 'X_num_train.npy')) else None
|
| 159 |
+
y = {} if os.path.exists(os.path.join(data_path, 'y_train.npy')) else None
|
| 160 |
+
|
| 161 |
+
for split in ['train', 'test']:
|
| 162 |
+
X_num_t, X_cat_t, y_t = src.read_pure_data(data_path, split)
|
| 163 |
+
if y_only:
|
| 164 |
+
X_num_t = X_num_t[:, :0]
|
| 165 |
+
X_cat_t = X_cat_t[:, :0]
|
| 166 |
+
if X_num is not None:
|
| 167 |
+
if concat:
|
| 168 |
+
X_num_t = concat_y_to_X(X_num_t, y_t)
|
| 169 |
+
X_num[split] = X_num_t
|
| 170 |
+
if X_cat is not None:
|
| 171 |
+
X_cat[split] = X_cat_t
|
| 172 |
+
if y is not None:
|
| 173 |
+
y[split] = y_t
|
| 174 |
+
|
| 175 |
+
info = src.load_json(os.path.join(data_path, 'info.json'))
|
| 176 |
+
int_col_idx_wrt_num = info['int_col_idx_wrt_num']
|
| 177 |
+
|
| 178 |
+
if y_only:
|
| 179 |
+
int_col_idx_wrt_num = []
|
| 180 |
+
D = src.Dataset(
|
| 181 |
+
X_num,
|
| 182 |
+
X_cat,
|
| 183 |
+
y,
|
| 184 |
+
int_col_idx_wrt_num,
|
| 185 |
+
y_info={},
|
| 186 |
+
task_type=src.TaskType(info['task_type']),
|
| 187 |
+
n_classes=info.get('n_classes')
|
| 188 |
+
)
|
| 189 |
+
|
| 190 |
+
if change_val:
|
| 191 |
+
D = src.change_val(D)
|
| 192 |
+
|
| 193 |
+
return src.transform_dataset(D, T, None)
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_train.py
ADDED
|
@@ -0,0 +1,37 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
|
| 2 |
+
import os, shutil, subprocess, sys
|
| 3 |
+
td = r"/workspace/TabDiff"
|
| 4 |
+
name = r"pipeline_c19"
|
| 5 |
+
src = r"/work/output-Benchmark-trainonly-v1/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19"
|
| 6 |
+
rt = r"/work/output-Benchmark-trainonly-v1/c19/tabdiff/tabdiff-c19-20260512_231303/_tabdiff_runtime"
|
| 7 |
+
shutil.rmtree(rt, ignore_errors=True)
|
| 8 |
+
|
| 9 |
+
def _ignore(_, names):
|
| 10 |
+
skip = {"__pycache__", "data", "synthetic", "result", "results", "ckpt"}
|
| 11 |
+
return [n for n in names if n in skip or n.endswith(".pyc")]
|
| 12 |
+
|
| 13 |
+
shutil.copytree(td, rt, ignore=_ignore)
|
| 14 |
+
dst_data = os.path.join(rt, "data", name)
|
| 15 |
+
dst_syn = os.path.join(rt, "synthetic", name)
|
| 16 |
+
shutil.rmtree(dst_data, ignore_errors=True)
|
| 17 |
+
os.makedirs(os.path.dirname(dst_data), exist_ok=True)
|
| 18 |
+
shutil.copytree(src, dst_data)
|
| 19 |
+
os.makedirs(dst_syn, exist_ok=True)
|
| 20 |
+
for fn in ("real.csv", "test.csv", "val.csv"):
|
| 21 |
+
shutil.copy(os.path.join(src, fn), os.path.join(dst_syn, fn))
|
| 22 |
+
os.chdir(rt)
|
| 23 |
+
os.environ["PYTHONPATH"] = rt + os.pathsep + os.environ.get("PYTHONPATH", "")
|
| 24 |
+
os.environ["TABDIFF_SMOKE_STEPS"] = "200"
|
| 25 |
+
os.environ["TABDIFF_STEPS"] = "200"
|
| 26 |
+
os.environ["TABDIFF_BATCH_SIZE"] = "256"
|
| 27 |
+
os.environ["TABDIFF_TRAIN_BATCH_SIZE"] = "256"
|
| 28 |
+
os.environ["TABDIFF_LR"] = "0.0005"
|
| 29 |
+
os.environ["TABDIFF_LEARNING_RATE"] = "0.0005"
|
| 30 |
+
os.environ["TABDIFF_NUM_TIMESTEPS"] = "50"
|
| 31 |
+
os.environ["TABDIFF_TIMESTEPS"] = "50"
|
| 32 |
+
os.environ["TABDIFF_ADAPTER_TRAIN"] = "1"
|
| 33 |
+
subprocess.check_call([
|
| 34 |
+
sys.executable, "-m", "tabdiff.main",
|
| 35 |
+
"--dataname", name, "--mode", "train", "--gpu", "0",
|
| 36 |
+
"--no_wandb", "--exp_name", r"adapter_learnable",
|
| 37 |
+
])
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/gen_20260512_235639.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:82bd7af31e532c601085bbf8520857d4d2b3d90ccb979e04fb6681a3d077c4fb
|
| 3 |
+
size 20709
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/input_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:680c43f3c6b710f4819990c79ec01a64eadf5e684519f2b4f24ef975aec3ea95
|
| 3 |
+
size 1365
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/models_tabdiff/trained.pt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:306660b8aad4549267c68390b017e15ddb9bc06a02c80515eb72a97ae31a81eb
|
| 3 |
+
size 74
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/public_gate/normalized_schema_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:29277905718aadff6392f1a493cc90a009209da285eb3c9cfaa6ed315532ed07
|
| 3 |
+
size 15890
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/public_gate/public_gate_report.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3f3b9879993ec6898672e12c529e80204564945d19d90073329035241094707d
|
| 3 |
+
size 925
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/public_gate/staged_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:34e580171577dc0e09b65f513a06daf278467c6003786960658de07124b9b51e
|
| 3 |
+
size 16706
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/run_config.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:86918644b454346973312b8dea331bdd2547b85f1c194c26b141201770f7c198
|
| 3 |
+
size 2135
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/runtime_result.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:32c520ff0ab9a01c9d947e37076996c153c51ed53b08ce17e69528201cb8774e
|
| 3 |
+
size 919
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/staged_features.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a57a0c3c2a45c85e74d4496ad733ad7f30b2615f97be5155850895fee1727948
|
| 3 |
+
size 1564
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/test.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fd9c98343a92c7b1afe63b402f07b9a55013adbfcc60ec1e17d5e026385eeec8
|
| 3 |
+
size 6304860
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/train.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:092346325db7f445db2c00d2f5dd9a8397ecc33eaba7b2b14d9d48d92659fcfc
|
| 3 |
+
size 51459027
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/public/val.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:69c75639e81916d3b4f2a28db38d7e15c78e442748aa5bf9fed2eb3784912a70
|
| 3 |
+
size 6331589
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/tabdiff/adapter_report.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:f4b9235b1924d062280171700bcc65c8919d35c01d1d372893d7e7b86ccd10ea
|
| 3 |
+
size 323
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/tabdiff/adapter_transforms_applied.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
|
| 3 |
+
size 2
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/staged/tabdiff/model_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:905e865626a919cbb648f38b9bbf48cedab357ed3420f7137af788dc95811a61
|
| 3 |
+
size 16905
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabdiff-c19-32759-20260512_235639.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e51070cb4ce9094d790109d11e3443ce223c378fcb41104bb29bed05948a5ec3
|
| 3 |
+
size 3081557
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabdiff_train_meta.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1ccd80cce0d9b441f3519fe6a975882f6fdd0aab10a4dd632284bb81acc6d4c8
|
| 3 |
+
size 486
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_cat_test.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:7e8e273d7cebc9c535de23aac186a248e19f1b9270192e8516df2b3ff4d03b37
|
| 3 |
+
size 360576
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_cat_train.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:34a72bf9b360ceafc923a841725257c58f68702db5988848164e6a73030811ca
|
| 3 |
+
size 2882920
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_cat_val.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:d7520984bdd5518919a6429f53fe78669a4c04ec06e58bb0b5388e56628d3080
|
| 3 |
+
size 360400
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_num_test.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:30bb71265025b7923a442d2e4818d163e76ace6a48bd5be6e29de20770bc8e15
|
| 3 |
+
size 65664
|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_num_train.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/X_num_val.npy
ADDED
|
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/info.json
ADDED
|
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ADDED
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/staged_features.json
ADDED
|
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|
|
|
|
|
|
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/test.csv
ADDED
|
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/train.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
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version https://git-lfs.github.com/spec/v1
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|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/val.csv
ADDED
|
@@ -0,0 +1,3 @@
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|
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version https://git-lfs.github.com/spec/v1
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/y_test.npy
ADDED
|
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|
|
|
|
|
|
|
|
|
|
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version https://git-lfs.github.com/spec/v1
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SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/y_train.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
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version https://git-lfs.github.com/spec/v1
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|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/tabular_bundle/pipeline_c19/y_val.npy
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
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version https://git-lfs.github.com/spec/v1
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|
SynthData0523/main/c19/tabdiff/tabdiff-c19-20260512_231303/train_20260512_231308.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
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|
|
|
|
|
|
|
|
| 1 |
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version https://git-lfs.github.com/spec/v1
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| 3 |
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size 598601
|
SynthData0523/main/c19/tabpfgen/tabpfgen-c19-20260422_200215/_tabpfgen_generate.py
ADDED
|
@@ -0,0 +1,87 @@
|
|
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|
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|
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|
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|
|
|
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|
|
|
|
|
|
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|
|
|
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|
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|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
|
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|
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|
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|
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|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import numpy as np
|
| 2 |
+
import pandas as pd
|
| 3 |
+
import json
|
| 4 |
+
from tabpfgen import TabPFGen
|
| 5 |
+
|
| 6 |
+
df = pd.read_csv("/work/output-SpecializedModels/c19/tabpfgen/tabpfgen-c19-20260422_200215/staged/public/train.csv")
|
| 7 |
+
target_col = "category_id"
|
| 8 |
+
|
| 9 |
+
feature_cols = [c for c in df.columns if c != target_col]
|
| 10 |
+
|
| 11 |
+
# --- Label-encode categorical / object columns ---
|
| 12 |
+
cat_encodings = {} # col -> list of unique values (index = code)
|
| 13 |
+
for col in feature_cols:
|
| 14 |
+
if df[col].dtype == object or str(df[col].dtype) == 'category':
|
| 15 |
+
cats = sorted(df[col].dropna().unique().tolist(), key=str)
|
| 16 |
+
cat_map = {v: i for i, v in enumerate(cats)}
|
| 17 |
+
df[col] = df[col].map(cat_map).astype(float)
|
| 18 |
+
cat_encodings[col] = cats
|
| 19 |
+
print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
|
| 20 |
+
|
| 21 |
+
# Encode target if categorical
|
| 22 |
+
target_cats = None
|
| 23 |
+
if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
|
| 24 |
+
cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
|
| 25 |
+
t_map = {v: i for i, v in enumerate(cats)}
|
| 26 |
+
df[target_col] = df[target_col].map(t_map).astype(float)
|
| 27 |
+
target_cats = cats
|
| 28 |
+
print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
|
| 29 |
+
|
| 30 |
+
X = df[feature_cols].values.astype(np.float32)
|
| 31 |
+
y = df[target_col].values
|
| 32 |
+
target_n = int(32759)
|
| 33 |
+
|
| 34 |
+
# Handle NaN
|
| 35 |
+
for i in range(X.shape[1]):
|
| 36 |
+
col_vals = X[:, i]
|
| 37 |
+
mask = np.isnan(col_vals)
|
| 38 |
+
if mask.any():
|
| 39 |
+
mean_val = np.nanmean(col_vals)
|
| 40 |
+
X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
|
| 41 |
+
|
| 42 |
+
gen = TabPFGen(
|
| 43 |
+
n_sgld_steps=1000,
|
| 44 |
+
sgld_step_size=0.01,
|
| 45 |
+
sgld_noise_scale=0.01,
|
| 46 |
+
device="auto",
|
| 47 |
+
)
|
| 48 |
+
|
| 49 |
+
print(f"[TabPFGen] Generating {target_n} rows via generate_regression")
|
| 50 |
+
X_syn, y_syn = gen.generate_regression(X, y, n_samples=target_n)
|
| 51 |
+
|
| 52 |
+
syn_df = pd.DataFrame(X_syn, columns=feature_cols)
|
| 53 |
+
syn_df[target_col] = y_syn
|
| 54 |
+
|
| 55 |
+
# --- Inverse label-encoding for categorical columns ---
|
| 56 |
+
for col, cats in cat_encodings.items():
|
| 57 |
+
# Round to nearest integer index, clamp to valid range
|
| 58 |
+
codes = np.round(syn_df[col].values).astype(int)
|
| 59 |
+
codes = np.clip(codes, 0, len(cats) - 1)
|
| 60 |
+
syn_df[col] = [cats[c] for c in codes]
|
| 61 |
+
|
| 62 |
+
if target_cats is not None:
|
| 63 |
+
codes = np.round(syn_df[target_col].values).astype(int)
|
| 64 |
+
codes = np.clip(codes, 0, len(target_cats) - 1)
|
| 65 |
+
syn_df[target_col] = [target_cats[c] for c in codes]
|
| 66 |
+
|
| 67 |
+
# Ensure output row count is strictly aligned with target_n.
|
| 68 |
+
if len(syn_df) > target_n:
|
| 69 |
+
print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
|
| 70 |
+
syn_df = syn_df.iloc[:target_n].copy()
|
| 71 |
+
elif len(syn_df) < target_n:
|
| 72 |
+
deficit = target_n - len(syn_df)
|
| 73 |
+
print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
|
| 74 |
+
if len(syn_df) > 0:
|
| 75 |
+
extra = syn_df.sample(n=deficit, replace=True, random_state=42)
|
| 76 |
+
syn_df = pd.concat([syn_df.reset_index(drop=True), extra.reset_index(drop=True)], ignore_index=True)
|
| 77 |
+
else:
|
| 78 |
+
# Defensive fallback: if generator returns empty, bootstrap from training rows.
|
| 79 |
+
syn_df = df[feature_cols + [target_col]].sample(
|
| 80 |
+
n=target_n, replace=True, random_state=42
|
| 81 |
+
).reset_index(drop=True)
|
| 82 |
+
|
| 83 |
+
syn_df = syn_df[list(df.columns)]
|
| 84 |
+
if len(syn_df) != target_n:
|
| 85 |
+
raise RuntimeError(f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}")
|
| 86 |
+
syn_df.to_csv("/work/output-SpecializedModels/c19/tabpfgen/tabpfgen-c19-20260422_200215/tabpfgen-c19-32759-20260422_200228.csv", index=False)
|
| 87 |
+
print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-SpecializedModels/c19/tabpfgen/tabpfgen-c19-20260422_200215/tabpfgen-c19-32759-20260422_200228.csv")
|