TabQueryBench commited on
Commit
bcab97e
·
verified ·
1 Parent(s): f108ab6

Resume SynthData0523 main/c6 batch 17

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. .gitattributes +30 -0
  2. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/pipeline.py +112 -0
  3. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/resample_privacy.py +257 -0
  4. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/sample.py +160 -0
  5. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/train.py +158 -0
  6. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/tune_ddpm.py +127 -0
  7. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/tune_evaluation_model.py +145 -0
  8. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/utils_train.py +89 -0
  9. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/smote/pipeline_smote.py +68 -0
  10. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/smote/sample_smote.py +210 -0
  11. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/smote/tune_smote.py +98 -0
  12. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__init__.py +2 -0
  13. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/__init__.cpython-311.pyc +0 -0
  14. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/gaussian_multinomial_diffsuion.cpython-311.pyc +0 -0
  15. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/modules.cpython-311.pyc +0 -0
  16. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/utils.cpython-311.pyc +0 -0
  17. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/gaussian_multinomial_diffsuion.py +993 -0
  18. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/modules.py +486 -0
  19. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/utils.py +174 -0
  20. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tools/convert_synth_to_csv.py +89 -0
  21. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tools/make_tabddpm_info.py +97 -0
  22. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/abalone_cv.json +3 -0
  23. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/adult_cv.json +3 -0
  24. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/buddy_cv.json +3 -0
  25. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/california_cv.json +3 -0
  26. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/cardio_cv.json +3 -0
  27. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/churn2_cv.json +3 -0
  28. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/default_cv.json +3 -0
  29. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/diabetes_cv.json +3 -0
  30. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/fb-comments_cv.json +3 -0
  31. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/gesture_cv.json +3 -0
  32. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/higgs-small_cv.json +3 -0
  33. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/house_cv.json +3 -0
  34. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/insurance_cv.json +3 -0
  35. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/king_cv.json +3 -0
  36. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/miniboone_cv.json +3 -0
  37. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/wilt_cv.json +3 -0
  38. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/abalone_cv.json +3 -0
  39. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/adult_cv.json +3 -0
  40. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/buddy_cv.json +3 -0
  41. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/california_cv.json +3 -0
  42. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/cardio_cv.json +3 -0
  43. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/churn2_cv.json +3 -0
  44. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/default_cv.json +3 -0
  45. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/diabetes_cv.json +3 -0
  46. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/gesture_cv.json +3 -0
  47. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/higgs-small_cv.json +3 -0
  48. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/house_cv.json +3 -0
  49. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/insurance_cv.json +3 -0
  50. SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/king_cv.json +3 -0
.gitattributes CHANGED
@@ -5271,3 +5271,33 @@ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wi
5271
  SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wilt/tvae/eval_catboost.json filter=lfs diff=lfs merge=lfs -text
5272
  SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wilt/tvae/eval_simple.json filter=lfs diff=lfs merge=lfs -text
5273
  SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wilt/tvae/info.json filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
5271
  SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wilt/tvae/eval_catboost.json filter=lfs diff=lfs merge=lfs -text
5272
  SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wilt/tvae/eval_simple.json filter=lfs diff=lfs merge=lfs -text
5273
  SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/exp/wilt/tvae/info.json filter=lfs diff=lfs merge=lfs -text
5274
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/abalone_cv.json filter=lfs diff=lfs merge=lfs -text
5275
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/adult_cv.json filter=lfs diff=lfs merge=lfs -text
5276
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/buddy_cv.json filter=lfs diff=lfs merge=lfs -text
5277
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/california_cv.json filter=lfs diff=lfs merge=lfs -text
5278
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/cardio_cv.json filter=lfs diff=lfs merge=lfs -text
5279
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/churn2_cv.json filter=lfs diff=lfs merge=lfs -text
5280
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/default_cv.json filter=lfs diff=lfs merge=lfs -text
5281
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/diabetes_cv.json filter=lfs diff=lfs merge=lfs -text
5282
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/fb-comments_cv.json filter=lfs diff=lfs merge=lfs -text
5283
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/gesture_cv.json filter=lfs diff=lfs merge=lfs -text
5284
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/higgs-small_cv.json filter=lfs diff=lfs merge=lfs -text
5285
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/house_cv.json filter=lfs diff=lfs merge=lfs -text
5286
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/insurance_cv.json filter=lfs diff=lfs merge=lfs -text
5287
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/king_cv.json filter=lfs diff=lfs merge=lfs -text
5288
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/miniboone_cv.json filter=lfs diff=lfs merge=lfs -text
5289
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/wilt_cv.json filter=lfs diff=lfs merge=lfs -text
5290
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/abalone_cv.json filter=lfs diff=lfs merge=lfs -text
5291
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/adult_cv.json filter=lfs diff=lfs merge=lfs -text
5292
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/buddy_cv.json filter=lfs diff=lfs merge=lfs -text
5293
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/california_cv.json filter=lfs diff=lfs merge=lfs -text
5294
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/cardio_cv.json filter=lfs diff=lfs merge=lfs -text
5295
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/churn2_cv.json filter=lfs diff=lfs merge=lfs -text
5296
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/default_cv.json filter=lfs diff=lfs merge=lfs -text
5297
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/diabetes_cv.json filter=lfs diff=lfs merge=lfs -text
5298
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/gesture_cv.json filter=lfs diff=lfs merge=lfs -text
5299
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/higgs-small_cv.json filter=lfs diff=lfs merge=lfs -text
5300
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/house_cv.json filter=lfs diff=lfs merge=lfs -text
5301
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/insurance_cv.json filter=lfs diff=lfs merge=lfs -text
5302
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/king_cv.json filter=lfs diff=lfs merge=lfs -text
5303
+ SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/miniboone_cv.json filter=lfs diff=lfs merge=lfs -text
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/pipeline.py ADDED
@@ -0,0 +1,112 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import tomli
2
+ import shutil
3
+ import os
4
+ import argparse
5
+ from scripts.train import train
6
+ from scripts.sample import sample
7
+ from scripts.eval_catboost import train_catboost
8
+ from scripts.eval_mlp import train_mlp
9
+ from scripts.eval_simple import train_simple
10
+ import pandas as pd
11
+ import matplotlib.pyplot as plt
12
+ import zero
13
+ import lib
14
+ import torch
15
+
16
+ def load_config(path) :
17
+ with open(path, 'rb') as f:
18
+ return tomli.load(f)
19
+
20
+ def save_file(parent_dir, config_path):
21
+ try:
22
+ dst = os.path.join(parent_dir)
23
+ os.makedirs(os.path.dirname(dst), exist_ok=True)
24
+ shutil.copyfile(os.path.abspath(config_path), dst)
25
+ except shutil.SameFileError:
26
+ pass
27
+
28
+ def main():
29
+ parser = argparse.ArgumentParser()
30
+ parser.add_argument('--config', metavar='FILE')
31
+ parser.add_argument('--train', action='store_true', default=False)
32
+ parser.add_argument('--sample', action='store_true', default=False)
33
+ parser.add_argument('--eval', action='store_true', default=False)
34
+ parser.add_argument('--change_val', action='store_true', default=False)
35
+
36
+ args = parser.parse_args()
37
+ raw_config = lib.load_config(args.config)
38
+ if 'device' in raw_config:
39
+ device = torch.device(raw_config['device'])
40
+ else:
41
+ device = torch.device('cuda:1')
42
+
43
+ timer = zero.Timer()
44
+ timer.run()
45
+ save_file(os.path.join(raw_config['parent_dir'], 'config.toml'), args.config)
46
+
47
+ if args.train:
48
+ train(
49
+ **raw_config['train']['main'],
50
+ **raw_config['diffusion_params'],
51
+ parent_dir=raw_config['parent_dir'],
52
+ real_data_path=raw_config['real_data_path'],
53
+ model_type=raw_config['model_type'],
54
+ model_params=raw_config['model_params'],
55
+ T_dict=raw_config['train']['T'],
56
+ num_numerical_features=raw_config['num_numerical_features'],
57
+ device=device,
58
+ change_val=args.change_val
59
+ )
60
+ if args.sample:
61
+ sample(
62
+ num_samples=raw_config['sample']['num_samples'],
63
+ batch_size=raw_config['sample']['batch_size'],
64
+ disbalance=raw_config['sample'].get('disbalance', None),
65
+ **raw_config['diffusion_params'],
66
+ parent_dir=raw_config['parent_dir'],
67
+ real_data_path=raw_config['real_data_path'],
68
+ model_path=os.path.join(raw_config['parent_dir'], 'model.pt'),
69
+ model_type=raw_config['model_type'],
70
+ model_params=raw_config['model_params'],
71
+ T_dict=raw_config['train']['T'],
72
+ num_numerical_features=raw_config['num_numerical_features'],
73
+ device=device,
74
+ seed=raw_config['sample'].get('seed', 0),
75
+ change_val=args.change_val
76
+ )
77
+
78
+ save_file(os.path.join(raw_config['parent_dir'], 'info.json'), os.path.join(raw_config['real_data_path'], 'info.json'))
79
+ if args.eval:
80
+ if raw_config['eval']['type']['eval_model'] == 'catboost':
81
+ train_catboost(
82
+ parent_dir=raw_config['parent_dir'],
83
+ real_data_path=raw_config['real_data_path'],
84
+ eval_type=raw_config['eval']['type']['eval_type'],
85
+ T_dict=raw_config['eval']['T'],
86
+ seed=raw_config['seed'],
87
+ change_val=args.change_val
88
+ )
89
+ elif raw_config['eval']['type']['eval_model'] == 'mlp':
90
+ train_mlp(
91
+ parent_dir=raw_config['parent_dir'],
92
+ real_data_path=raw_config['real_data_path'],
93
+ eval_type=raw_config['eval']['type']['eval_type'],
94
+ T_dict=raw_config['eval']['T'],
95
+ seed=raw_config['seed'],
96
+ change_val=args.change_val,
97
+ device=device
98
+ )
99
+ elif raw_config['eval']['type']['eval_model'] == 'simple':
100
+ train_simple(
101
+ parent_dir=raw_config['parent_dir'],
102
+ real_data_path=raw_config['real_data_path'],
103
+ eval_type=raw_config['eval']['type']['eval_type'],
104
+ T_dict=raw_config['eval']['T'],
105
+ seed=raw_config['seed'],
106
+ change_val=args.change_val
107
+ )
108
+
109
+ print(f'Elapsed time: {str(timer)}')
110
+
111
+ if __name__ == '__main__':
112
+ main()
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/resample_privacy.py ADDED
@@ -0,0 +1,257 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ """
2
+ Adapted from https://github.com/Team-TUD/CTAB-GAN/tree/main/model/eval
3
+ """
4
+
5
+ import argparse
6
+ import lib
7
+ import os
8
+ import shutil
9
+ import zero
10
+ from sample import sample
11
+ from smote.sample_smote import sample_smote
12
+ from sklearn.preprocessing import MinMaxScaler, OneHotEncoder
13
+ from sklearn.metrics import pairwise_distances
14
+ from pathlib import Path
15
+ import tempfile
16
+ from eval_seeds import eval_seeds
17
+ import numpy as np
18
+ import subprocess
19
+ import warnings
20
+ import torch
21
+
22
+ zero.improve_reproducibility(0)
23
+
24
+ warnings.filterwarnings("ignore", category=FutureWarning)
25
+
26
+
27
+ def privacy_metrics(real_path,fake_path, data_percent=15):
28
+
29
+ """
30
+ Returns privacy metrics
31
+
32
+ Inputs:
33
+ 1) real_path -> path to real data
34
+ 2) fake_path -> path to corresponding synthetic data
35
+ 3) data_percent -> percentage of data to be sampled from real and synthetic datasets for computing privacy metrics
36
+ Outputs:
37
+ 1) List containing the 5th percentile distance to closest record (DCR) between real and synthetic as well as within real and synthetic datasets
38
+ along with 5th percentile of nearest neighbour distance ratio (NNDR) between real and synthetic as well as within real and synthetic datasets
39
+
40
+ """
41
+ task_type = lib.load_json(real_path + "/info.json")["task_type"]
42
+ X_num_real, X_cat_real, y_real = lib.read_pure_data(real_path, 'train')
43
+ X_num_fake, X_cat_fake, y_fake = lib.read_pure_data(fake_path, 'train')
44
+
45
+ if task_type == 'regression':
46
+ X_num_real = np.concatenate([X_num_real, y_real[:, np.newaxis]], axis=1)
47
+ X_num_fake = np.concatenate([X_num_fake, y_fake[:, np.newaxis]], axis=1)
48
+ else:
49
+ if X_cat_fake is None:
50
+ X_cat_real = y_real[:, np.newaxis].astype(int).astype(str)
51
+ X_cat_fake = y_fake[:, np.newaxis].astype(int).astype(str)
52
+ else:
53
+ X_cat_real = np.concatenate([X_cat_real, y_real[:, np.newaxis].astype(int).astype(str)], axis=1)
54
+ X_cat_fake = np.concatenate([X_cat_fake, y_fake[:, np.newaxis].astype(int).astype(str)], axis=1)
55
+
56
+ if len(y_real) > 50000:
57
+ ixs = np.random.choice(len(y_real), 50000, replace=False)
58
+ X_num_real = X_num_real[ixs]
59
+ X_cat_real = X_cat_real[ixs] if X_cat_real is not None else None
60
+
61
+ if len(y_fake) > 50000:
62
+ ixs = np.random.choice(len(y_fake), 50000, replace=False)
63
+ X_num_fake = X_num_fake[ixs]
64
+ X_cat_fake = X_cat_fake[ixs] if X_cat_fake is not None else None
65
+
66
+
67
+ mm = MinMaxScaler().fit(X_num_real)
68
+ X_real = mm.transform(X_num_real)
69
+ X_fake = mm.transform(X_num_fake)
70
+ if X_cat_real is not None:
71
+ ohe = OneHotEncoder().fit(X_cat_real)
72
+ X_cat_real = ohe.transform(X_cat_real) / np.sqrt(2)
73
+ X_cat_fake = ohe.transform(X_cat_fake) / np.sqrt(2)
74
+
75
+ X_real = np.concatenate([X_real, X_cat_real.todense()], axis=1)
76
+ X_fake = np.concatenate([X_fake, X_cat_fake.todense()], axis=1)
77
+
78
+ # X_real = np.unique(X_real, axis=0)
79
+ # X_fake = np.unique(X_fake, axis=0)
80
+
81
+ # Computing pair-wise distances between real and synthetic
82
+ dist_rf = pairwise_distances(X_fake, Y=X_real, metric='l2', n_jobs=-1)
83
+ # Computing pair-wise distances within real
84
+ # dist_rr = pairwise_distances(X_real, Y=None, metric='l2', n_jobs=-1)
85
+ # Computing pair-wise distances within synthetic
86
+ # dist_ff = pairwise_distances(X_fake, Y=None, metric='l2', n_jobs=-1)
87
+
88
+
89
+ # Removes distances of data points to themselves to avoid 0s within real and synthetic
90
+ # rd_dist_rr = dist_rr[~np.eye(dist_rr.shape[0],dtype=bool)].reshape(dist_rr.shape[0],-1)
91
+ # rd_dist_ff = dist_ff[~np.eye(dist_ff.shape[0],dtype=bool)].reshape(dist_ff.shape[0],-1)
92
+
93
+ # Computing first and second smallest nearest neighbour distances between real and synthetic
94
+ smallest_two_indexes_rf = [dist_rf[i].argsort()[:2] for i in range(len(dist_rf))]
95
+ smallest_two_rf = [dist_rf[i][smallest_two_indexes_rf[i]] for i in range(len(dist_rf))]
96
+ # Computing first and second smallest nearest neighbour distances within real
97
+ # smallest_two_indexes_rr = [rd_dist_rr[i].argsort()[:2] for i in range(len(rd_dist_rr))]
98
+ # smallest_two_rr = [rd_dist_rr[i][smallest_two_indexes_rr[i]] for i in range(len(rd_dist_rr))]
99
+ # Computing first and second smallest nearest neighbour distances within synthetic
100
+ # smallest_two_indexes_ff = [rd_dist_ff[i].argsort()[:2] for i in range(len(rd_dist_ff))]
101
+ # smallest_two_ff = [rd_dist_ff[i][smallest_two_indexes_ff[i]] for i in range(len(rd_dist_ff))]
102
+
103
+
104
+ # Computing 5th percentiles for DCR and NNDR between and within real and synthetic datasets
105
+ min_dist_rf = np.array([i[0] for i in smallest_two_rf])
106
+ fifth_perc_rf = np.percentile(min_dist_rf,5)
107
+ # min_dist_rr = np.array([i[0] for i in smallest_two_rr])
108
+ # fifth_perc_rr = np.percentile(min_dist_rr,5)
109
+ # min_dist_ff = np.array([i[0] for i in smallest_two_ff])
110
+ # fifth_perc_ff = np.percentile(min_dist_ff,5)
111
+ # nn_ratio_rf = np.array([i[0]/i[1] for i in smallest_two_rf])
112
+ # nn_fifth_perc_rf = np.percentile(nn_ratio_rf,5)
113
+ # nn_ratio_rr = np.array([i[0]/i[1] for i in smallest_two_rr])
114
+ # nn_fifth_perc_rr = np.percentile(nn_ratio_rr,5)
115
+ # nn_ratio_ff = np.array([i[0]/i[1] for i in smallest_two_ff])
116
+ # nn_fifth_perc_ff = np.percentile(nn_ratio_ff,5)
117
+
118
+ # return np.array([fifth_perc_rf,fifth_perc_rr,fifth_perc_ff,nn_fifth_perc_rf,nn_fifth_perc_rr,nn_fifth_perc_ff]).reshape(1,6)
119
+ return min_dist_rf # , min_dist_rr
120
+
121
+ def sample_wrapper(method, config, num_samples=None, seed=0):
122
+ if method == "ddpm":
123
+ sample(
124
+ num_samples=num_samples,
125
+ batch_size=config['sample']['batch_size'],
126
+ disbalance=config['sample'].get('disbalance', None),
127
+ **config['diffusion_params'],
128
+ parent_dir=config['parent_dir'],
129
+ real_data_path=config['real_data_path'],
130
+ model_path=os.path.join(config['parent_dir'], 'model.pt'),
131
+ model_type=config['model_type'],
132
+ model_params=config['model_params'],
133
+ T_dict=config['train']['T'],
134
+ num_numerical_features=config['num_numerical_features'],
135
+ seed=seed,
136
+ change_val=False,
137
+ device=torch.device(config["device"])
138
+ )
139
+ elif method == "smote":
140
+ sample_smote(
141
+ parent_dir=config['parent_dir'],
142
+ real_data_path=config['real_data_path'],
143
+ **config['smote_params'],
144
+ seed=seed,
145
+ change_val=False
146
+ )
147
+
148
+ def resample_privacy(config_path, method, q):
149
+ with tempfile.TemporaryDirectory() as dir_:
150
+ config = lib.load_config(config_path)
151
+ if method == "ddpm":
152
+ shutil.copy2(os.path.join(config['parent_dir'], 'model.pt'), os.path.join(dir_, 'model.pt'))
153
+ config["parent_dir"] = str(dir_)
154
+ parent_dir = config["parent_dir"]
155
+
156
+ sample_wrapper(method, config, num_samples=config["sample"].get("num_samples", 0))
157
+
158
+ dists = privacy_metrics(config["real_data_path"], parent_dir)
159
+ old_privacy = np.median(dists)
160
+
161
+ q10 = np.quantile(dists, q=q)
162
+ print(f"Q: {q10}")
163
+ to_drop = np.where(dists < q10)
164
+
165
+ X_num, X_cat, y = lib.read_pure_data(parent_dir)
166
+ num_samples = len(y)
167
+ X_num = np.delete(X_num, to_drop, axis=0)
168
+ X_cat = np.delete(X_cat, to_drop, axis=0) if X_cat is not None else None
169
+ y = np.delete(y, to_drop, axis=0)
170
+ i = 1
171
+
172
+ while len(y) < num_samples and i <= 10:
173
+ print(f"{len(y)}/{num_samples}")
174
+
175
+ sample_wrapper(method, config, num_samples=config["sample"].get("batch_size", 0), seed=i)
176
+
177
+ i += 1
178
+
179
+ X_num_t, X_cat_t, y_t = lib.read_pure_data(parent_dir)
180
+ dists = privacy_metrics(config["real_data_path"], parent_dir)
181
+ to_drop = np.where(dists < q10)
182
+ X_num_t = np.delete(X_num_t, to_drop, axis=0)
183
+ X_cat_t = np.delete(X_cat_t, to_drop, axis=0) if X_cat is not None else None
184
+ y_t = np.delete(y_t, to_drop, axis=0)
185
+
186
+ X_num = np.concatenate([X_num, X_num_t], axis=0)[:num_samples]
187
+ X_cat = np.concatenate([X_cat, X_cat_t], axis=0)[:num_samples] if X_cat is not None else None
188
+ y = np.concatenate([y, y_t], axis=0)[:num_samples]
189
+
190
+ # np.save(os.path.join(parent_dir, 'X_num_train'), X_num)
191
+ # if X_cat is not None:
192
+ # np.save(os.path.join(parent_dir, 'X_cat_train'), X_cat)
193
+ # np.save(os.path.join(parent_dir, 'y_train'), y)
194
+
195
+ np.save(os.path.join(parent_dir, 'X_num_train'), X_num)
196
+ if X_cat is not None:
197
+ np.save(os.path.join(parent_dir, 'X_cat_train'), X_cat)
198
+ np.save(os.path.join(parent_dir, 'y_train'), y)
199
+
200
+ new_dists = privacy_metrics(config["real_data_path"], parent_dir)
201
+
202
+ res = eval_seeds(
203
+ config,
204
+ n_seeds=10,
205
+ eval_type="synthetic",
206
+ model_type="catboost",
207
+ n_datasets=1,
208
+ dump=False
209
+ )
210
+ print(f"Old: {old_privacy:.4f}, New: {np.median(new_dists):.4f}")
211
+
212
+ metric = "r2-mean" if "r2-mean" in res["test"] else "f1-mean"
213
+ return res["test"][metric], np.around(np.median(new_dists), 4)
214
+
215
+ def resample_privacy_qs(config_path, method):
216
+ config = lib.load_config(config_path)
217
+ scores = []
218
+ privacies = []
219
+
220
+ eval_res = lib.load_json(Path(config["parent_dir"]) / "eval_catboost.json")["synthetic"]["test"]
221
+ metric = "r2-mean" if "r2-mean" in eval_res else "f1-mean"
222
+ scores.append(eval_res[metric])
223
+ privacies.append(np.median(privacy_metrics(config["real_data_path"], config["parent_dir"])))
224
+
225
+ for q in [0.1, 0.2, 0.3, 0.4]:
226
+ score, privacy = resample_privacy(config_path, method, q)
227
+ scores.append(score)
228
+ privacies.append(privacy)
229
+
230
+ lib.dump_json(
231
+ {"scores": scores, "privacies": privacies},
232
+ Path(config["parent_dir"]) / "privacies.json"
233
+ )
234
+
235
+ def calc_privacy(config_path, method, seed=0):
236
+ config = lib.load_config(config_path)
237
+ sample_wrapper(method, config, num_samples=config["sample"]["num_samples"], seed=seed)
238
+ timer = zero.Timer()
239
+ timer.run()
240
+ dists = privacy_metrics(config["real_data_path"], config["parent_dir"])
241
+ privacy_val = np.median(dists)
242
+ lib.dump_json({"privacy": privacy_val}, os.path.join(config["parent_dir"], "privacy.json"))
243
+ print(f"Elapsed tine:{str(timer)}")
244
+
245
+ def main():
246
+ parser = argparse.ArgumentParser()
247
+ parser.add_argument('--config', metavar='FILE')
248
+ parser.add_argument('method', type=str)
249
+ args = parser.parse_args()
250
+
251
+ calc_privacy(
252
+ args.config,
253
+ args.method
254
+ )
255
+
256
+ if __name__ == "__main__":
257
+ main()
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/sample.py ADDED
@@ -0,0 +1,160 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import torch
2
+ import numpy as np
3
+ import zero
4
+ import os
5
+ from tab_ddpm.gaussian_multinomial_diffsuion import GaussianMultinomialDiffusion
6
+ from tab_ddpm.utils import FoundNANsError
7
+ from scripts.utils_train import get_model, make_dataset
8
+ from lib import round_columns
9
+ import lib
10
+
11
+ def to_good_ohe(ohe, X):
12
+ indices = np.cumsum([0] + ohe._n_features_outs)
13
+ Xres = []
14
+ for i in range(1, len(indices)):
15
+ x_ = np.max(X[:, indices[i - 1]:indices[i]], axis=1)
16
+ t = X[:, indices[i - 1]:indices[i]] - x_.reshape(-1, 1)
17
+ Xres.append(np.where(t >= 0, 1, 0))
18
+ return np.hstack(Xres)
19
+
20
+ def sample(
21
+ parent_dir,
22
+ real_data_path = 'data/higgs-small',
23
+ batch_size = 2000,
24
+ num_samples = 0,
25
+ model_type = 'mlp',
26
+ model_params = None,
27
+ model_path = None,
28
+ num_timesteps = 1000,
29
+ gaussian_loss_type = 'mse',
30
+ scheduler = 'cosine',
31
+ T_dict = None,
32
+ num_numerical_features = 0,
33
+ disbalance = None,
34
+ device = torch.device('cuda:1'),
35
+ seed = 0,
36
+ change_val = False
37
+ ):
38
+ zero.improve_reproducibility(seed)
39
+
40
+ T = lib.Transformations(**T_dict)
41
+ D = make_dataset(
42
+ real_data_path,
43
+ T,
44
+ num_classes=model_params['num_classes'],
45
+ is_y_cond=model_params['is_y_cond'],
46
+ change_val=change_val
47
+ )
48
+
49
+ K = np.array(D.get_category_sizes('train'))
50
+ if len(K) == 0 or T_dict['cat_encoding'] == 'one-hot':
51
+ K = np.array([0])
52
+
53
+ num_numerical_features_ = D.X_num['train'].shape[1] if D.X_num is not None else 0
54
+ d_in = np.sum(K) + num_numerical_features_
55
+ model_params['d_in'] = int(d_in)
56
+ model = get_model(
57
+ model_type,
58
+ model_params,
59
+ num_numerical_features_,
60
+ category_sizes=D.get_category_sizes('train')
61
+ )
62
+
63
+ model.load_state_dict(
64
+ torch.load(model_path, map_location="cpu")
65
+ )
66
+
67
+ diffusion = GaussianMultinomialDiffusion(
68
+ K,
69
+ num_numerical_features=num_numerical_features_,
70
+ denoise_fn=model, num_timesteps=num_timesteps,
71
+ gaussian_loss_type=gaussian_loss_type, scheduler=scheduler, device=device
72
+ )
73
+
74
+ diffusion.to(device)
75
+ diffusion.eval()
76
+
77
+ _, empirical_class_dist = torch.unique(torch.from_numpy(D.y['train']), return_counts=True)
78
+ # empirical_class_dist = empirical_class_dist.float() + torch.tensor([-5000., 10000.]).float()
79
+ if disbalance == 'fix':
80
+ empirical_class_dist[0], empirical_class_dist[1] = empirical_class_dist[1], empirical_class_dist[0]
81
+ x_gen, y_gen = diffusion.sample_all(num_samples, batch_size, empirical_class_dist.float(), ddim=False)
82
+
83
+ elif disbalance == 'fill':
84
+ ix_major = empirical_class_dist.argmax().item()
85
+ val_major = empirical_class_dist[ix_major].item()
86
+ x_gen, y_gen = [], []
87
+ for i in range(empirical_class_dist.shape[0]):
88
+ if i == ix_major:
89
+ continue
90
+ distrib = torch.zeros_like(empirical_class_dist)
91
+ distrib[i] = 1
92
+ num_samples = val_major - empirical_class_dist[i].item()
93
+ x_temp, y_temp = diffusion.sample_all(num_samples, batch_size, distrib.float(), ddim=False)
94
+ x_gen.append(x_temp)
95
+ y_gen.append(y_temp)
96
+
97
+ x_gen = torch.cat(x_gen, dim=0)
98
+ y_gen = torch.cat(y_gen, dim=0)
99
+
100
+ else:
101
+ x_gen, y_gen = diffusion.sample_all(num_samples, batch_size, empirical_class_dist.float(), ddim=False)
102
+
103
+
104
+ # try:
105
+ # except FoundNANsError as ex:
106
+ # print("Found NaNs during sampling!")
107
+ # loader = lib.prepare_fast_dataloader(D, 'train', 8)
108
+ # x_gen = next(loader)[0]
109
+ # y_gen = torch.multinomial(
110
+ # empirical_class_dist.float(),
111
+ # num_samples=8,
112
+ # replacement=True
113
+ # )
114
+ X_gen, y_gen = x_gen.numpy(), y_gen.numpy()
115
+
116
+ ###
117
+ # X_num_unnorm = X_gen[:, :num_numerical_features]
118
+ # lo = np.percentile(X_num_unnorm, 2.5, axis=0)
119
+ # hi = np.percentile(X_num_unnorm, 97.5, axis=0)
120
+ # idx = (lo < X_num_unnorm) & (hi > X_num_unnorm)
121
+ # X_gen = X_gen[np.all(idx, axis=1)]
122
+ # y_gen = y_gen[np.all(idx, axis=1)]
123
+ ###
124
+
125
+ num_numerical_features = num_numerical_features + int(D.is_regression and not model_params["is_y_cond"])
126
+
127
+ X_num_ = X_gen
128
+ if num_numerical_features < X_gen.shape[1]:
129
+ np.save(os.path.join(parent_dir, 'X_cat_unnorm'), X_gen[:, num_numerical_features:])
130
+ # _, _, cat_encoder = lib.cat_encode({'train': X_cat_real}, T_dict['cat_encoding'], y_real, T_dict['seed'], True)
131
+ if T_dict['cat_encoding'] == 'one-hot':
132
+ X_gen[:, num_numerical_features:] = to_good_ohe(D.cat_transform.steps[0][1], X_num_[:, num_numerical_features:])
133
+ X_cat = D.cat_transform.inverse_transform(X_gen[:, num_numerical_features:])
134
+
135
+ if num_numerical_features_ != 0:
136
+ # _, normalize = lib.normalize({'train' : X_num_real}, T_dict['normalization'], T_dict['seed'], True)
137
+ np.save(os.path.join(parent_dir, 'X_num_unnorm'), X_gen[:, :num_numerical_features])
138
+ X_num_ = D.num_transform.inverse_transform(X_gen[:, :num_numerical_features])
139
+ X_num = X_num_[:, :num_numerical_features]
140
+
141
+ X_num_real = np.load(os.path.join(real_data_path, "X_num_train.npy"), allow_pickle=True)
142
+ disc_cols = []
143
+ for col in range(X_num_real.shape[1]):
144
+ uniq_vals = np.unique(X_num_real[:, col])
145
+ if len(uniq_vals) <= 32 and ((uniq_vals - np.round(uniq_vals)) == 0).all():
146
+ disc_cols.append(col)
147
+ print("Discrete cols:", disc_cols)
148
+ # 仅当 regression 且 y 在 X_num 中(非 is_y_cond)时才提取 y;否则 y_gen 已由 sample_all 返回
149
+ if model_params['num_classes'] == 0 and not model_params.get('is_y_cond', True):
150
+ y_gen = X_num[:, 0]
151
+ X_num = X_num[:, 1:]
152
+ if len(disc_cols):
153
+ X_num = round_columns(X_num_real, X_num, disc_cols)
154
+
155
+ if num_numerical_features != 0:
156
+ print("Num shape: ", X_num.shape)
157
+ np.save(os.path.join(parent_dir, 'X_num_train'), X_num)
158
+ if num_numerical_features < X_gen.shape[1]:
159
+ np.save(os.path.join(parent_dir, 'X_cat_train'), X_cat)
160
+ np.save(os.path.join(parent_dir, 'y_train'), y_gen)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/train.py ADDED
@@ -0,0 +1,158 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ from copy import deepcopy
2
+ import torch
3
+ import os
4
+ import numpy as np
5
+ import zero
6
+ from tab_ddpm import GaussianMultinomialDiffusion
7
+ from scripts.utils_train import get_model, make_dataset, update_ema
8
+ import lib
9
+ import pandas as pd
10
+
11
+ class Trainer:
12
+ def __init__(self, diffusion, train_iter, lr, weight_decay, steps, device=torch.device('cuda:1')):
13
+ self.diffusion = diffusion
14
+ self.ema_model = deepcopy(self.diffusion._denoise_fn)
15
+ for param in self.ema_model.parameters():
16
+ param.detach_()
17
+
18
+ self.train_iter = train_iter
19
+ self.steps = steps
20
+ self.init_lr = lr
21
+ self.optimizer = torch.optim.AdamW(self.diffusion.parameters(), lr=lr, weight_decay=weight_decay)
22
+ self.device = device
23
+ self.loss_history = pd.DataFrame(columns=['step', 'mloss', 'gloss', 'loss'])
24
+ self.log_every = 100
25
+ self.print_every = 500
26
+ self.ema_every = 1000
27
+
28
+ def _anneal_lr(self, step):
29
+ frac_done = step / self.steps
30
+ lr = self.init_lr * (1 - frac_done)
31
+ for param_group in self.optimizer.param_groups:
32
+ param_group["lr"] = lr
33
+
34
+ def _run_step(self, x, out_dict):
35
+ x = x.to(self.device)
36
+ for k in out_dict:
37
+ out_dict[k] = out_dict[k].long().to(self.device)
38
+ self.optimizer.zero_grad()
39
+ loss_multi, loss_gauss = self.diffusion.mixed_loss(x, out_dict)
40
+ loss = loss_multi + loss_gauss
41
+ loss.backward()
42
+ self.optimizer.step()
43
+
44
+ return loss_multi, loss_gauss
45
+
46
+ def run_loop(self):
47
+ step = 0
48
+ curr_loss_multi = 0.0
49
+ curr_loss_gauss = 0.0
50
+
51
+ curr_count = 0
52
+ while step < self.steps:
53
+ x, out_dict = next(self.train_iter)
54
+ out_dict = {'y': out_dict}
55
+ batch_loss_multi, batch_loss_gauss = self._run_step(x, out_dict)
56
+
57
+ self._anneal_lr(step)
58
+
59
+ curr_count += len(x)
60
+ curr_loss_multi += batch_loss_multi.item() * len(x)
61
+ curr_loss_gauss += batch_loss_gauss.item() * len(x)
62
+
63
+ if (step + 1) % self.log_every == 0:
64
+ mloss = np.around(curr_loss_multi / curr_count, 4)
65
+ gloss = np.around(curr_loss_gauss / curr_count, 4)
66
+ if (step + 1) % self.print_every == 0:
67
+ print(f'Step {(step + 1)}/{self.steps} MLoss: {mloss} GLoss: {gloss} Sum: {mloss + gloss}')
68
+ self.loss_history.loc[len(self.loss_history)] =[step + 1, mloss, gloss, mloss + gloss]
69
+ curr_count = 0
70
+ curr_loss_gauss = 0.0
71
+ curr_loss_multi = 0.0
72
+
73
+ update_ema(self.ema_model.parameters(), self.diffusion._denoise_fn.parameters())
74
+
75
+ step += 1
76
+
77
+ def train(
78
+ parent_dir,
79
+ real_data_path = 'data/higgs-small',
80
+ steps = 1000,
81
+ lr = 0.002,
82
+ weight_decay = 1e-4,
83
+ batch_size = 1024,
84
+ model_type = 'mlp',
85
+ model_params = None,
86
+ num_timesteps = 1000,
87
+ gaussian_loss_type = 'mse',
88
+ scheduler = 'cosine',
89
+ T_dict = None,
90
+ num_numerical_features = 0,
91
+ device = torch.device('cuda:1'),
92
+ seed = 0,
93
+ change_val = False
94
+ ):
95
+ real_data_path = os.path.normpath(real_data_path)
96
+ parent_dir = os.path.normpath(parent_dir)
97
+
98
+ zero.improve_reproducibility(seed)
99
+
100
+ T = lib.Transformations(**T_dict)
101
+
102
+ dataset = make_dataset(
103
+ real_data_path,
104
+ T,
105
+ num_classes=model_params['num_classes'],
106
+ is_y_cond=model_params['is_y_cond'],
107
+ change_val=change_val
108
+ )
109
+
110
+ K = np.array(dataset.get_category_sizes('train'))
111
+ if len(K) == 0 or T_dict['cat_encoding'] == 'one-hot':
112
+ K = np.array([0])
113
+ print(K)
114
+
115
+ num_numerical_features = dataset.X_num['train'].shape[1] if dataset.X_num is not None else 0
116
+ d_in = np.sum(K) + num_numerical_features
117
+ model_params['d_in'] = d_in
118
+ print(d_in)
119
+
120
+ print(model_params)
121
+ model = get_model(
122
+ model_type,
123
+ model_params,
124
+ num_numerical_features,
125
+ category_sizes=dataset.get_category_sizes('train')
126
+ )
127
+ model.to(device)
128
+
129
+ # train_loader = lib.prepare_beton_loader(dataset, split='train', batch_size=batch_size)
130
+ train_loader = lib.prepare_fast_dataloader(dataset, split='train', batch_size=batch_size)
131
+
132
+
133
+
134
+ diffusion = GaussianMultinomialDiffusion(
135
+ num_classes=K,
136
+ num_numerical_features=num_numerical_features,
137
+ denoise_fn=model,
138
+ gaussian_loss_type=gaussian_loss_type,
139
+ num_timesteps=num_timesteps,
140
+ scheduler=scheduler,
141
+ device=device
142
+ )
143
+ diffusion.to(device)
144
+ diffusion.train()
145
+
146
+ trainer = Trainer(
147
+ diffusion,
148
+ train_loader,
149
+ lr=lr,
150
+ weight_decay=weight_decay,
151
+ steps=steps,
152
+ device=device
153
+ )
154
+ trainer.run_loop()
155
+
156
+ trainer.loss_history.to_csv(os.path.join(parent_dir, 'loss.csv'), index=False)
157
+ torch.save(diffusion._denoise_fn.state_dict(), os.path.join(parent_dir, 'model.pt'))
158
+ torch.save(trainer.ema_model.state_dict(), os.path.join(parent_dir, 'model_ema.pt'))
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/tune_ddpm.py ADDED
@@ -0,0 +1,127 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import subprocess
2
+ import lib
3
+ import os
4
+ import optuna
5
+ from copy import deepcopy
6
+ import shutil
7
+ import argparse
8
+ from pathlib import Path
9
+
10
+ parser = argparse.ArgumentParser()
11
+ parser.add_argument('ds_name', type=str)
12
+ parser.add_argument('train_size', type=int)
13
+ parser.add_argument('eval_type', type=str)
14
+ parser.add_argument('eval_model', type=str)
15
+ parser.add_argument('prefix', type=str)
16
+ parser.add_argument('--eval_seeds', action='store_true', default=False)
17
+
18
+ args = parser.parse_args()
19
+ train_size = args.train_size
20
+ ds_name = args.ds_name
21
+ eval_type = args.eval_type
22
+ assert eval_type in ('merged', 'synthetic')
23
+ prefix = str(args.prefix)
24
+
25
+ pipeline = f'scripts/pipeline.py'
26
+ base_config_path = f'exp/{ds_name}/config.toml'
27
+ parent_path = Path(f'exp/{ds_name}/')
28
+ exps_path = Path(f'exp/{ds_name}/many-exps/') # temporary dir. maybe will be replaced with tempdiвdr
29
+ eval_seeds = f'scripts/eval_seeds.py'
30
+
31
+ os.makedirs(exps_path, exist_ok=True)
32
+
33
+ def _suggest_mlp_layers(trial):
34
+ def suggest_dim(name):
35
+ t = trial.suggest_int(name, d_min, d_max)
36
+ return 2 ** t
37
+ min_n_layers, max_n_layers, d_min, d_max = 1, 4, 7, 10
38
+ n_layers = 2 * trial.suggest_int('n_layers', min_n_layers, max_n_layers)
39
+ d_first = [suggest_dim('d_first')] if n_layers else []
40
+ d_middle = (
41
+ [suggest_dim('d_middle')] * (n_layers - 2)
42
+ if n_layers > 2
43
+ else []
44
+ )
45
+ d_last = [suggest_dim('d_last')] if n_layers > 1 else []
46
+ d_layers = d_first + d_middle + d_last
47
+ return d_layers
48
+
49
+ def objective(trial):
50
+
51
+ lr = trial.suggest_loguniform('lr', 0.00001, 0.003)
52
+ d_layers = _suggest_mlp_layers(trial)
53
+ weight_decay = 0.0
54
+ batch_size = trial.suggest_categorical('batch_size', [256, 4096])
55
+ steps = trial.suggest_categorical('steps', [5000, 20000, 30000])
56
+ # steps = trial.suggest_categorical('steps', [500]) # for debug
57
+ gaussian_loss_type = 'mse'
58
+ # scheduler = trial.suggest_categorical('scheduler', ['cosine', 'linear'])
59
+ num_timesteps = trial.suggest_categorical('num_timesteps', [100, 1000])
60
+ num_samples = int(train_size * (2 ** trial.suggest_int('num_samples', -2, 1)))
61
+
62
+ base_config = lib.load_config(base_config_path)
63
+
64
+ base_config['train']['main']['lr'] = lr
65
+ base_config['train']['main']['steps'] = steps
66
+ base_config['train']['main']['batch_size'] = batch_size
67
+ base_config['train']['main']['weight_decay'] = weight_decay
68
+ base_config['model_params']['rtdl_params']['d_layers'] = d_layers
69
+ base_config['eval']['type']['eval_type'] = eval_type
70
+ base_config['sample']['num_samples'] = num_samples
71
+ base_config['diffusion_params']['gaussian_loss_type'] = gaussian_loss_type
72
+ base_config['diffusion_params']['num_timesteps'] = num_timesteps
73
+ # base_config['diffusion_params']['scheduler'] = scheduler
74
+
75
+ base_config['parent_dir'] = str(exps_path / f"{trial.number}")
76
+ base_config['eval']['type']['eval_model'] = args.eval_model
77
+ if args.eval_model == "mlp":
78
+ base_config['eval']['T']['normalization'] = "quantile"
79
+ base_config['eval']['T']['cat_encoding'] = "one-hot"
80
+
81
+ trial.set_user_attr("config", base_config)
82
+
83
+ lib.dump_config(base_config, exps_path / 'config.toml')
84
+
85
+ subprocess.run(['python3.9', f'{pipeline}', '--config', f'{exps_path / "config.toml"}', '--train', '--change_val'], check=True)
86
+
87
+ n_datasets = 5
88
+ score = 0.0
89
+
90
+ for sample_seed in range(n_datasets):
91
+ base_config['sample']['seed'] = sample_seed
92
+ lib.dump_config(base_config, exps_path / 'config.toml')
93
+
94
+ subprocess.run(['python3.9', f'{pipeline}', '--config', f'{exps_path / "config.toml"}', '--sample', '--eval', '--change_val'], check=True)
95
+
96
+ report_path = str(Path(base_config['parent_dir']) / f'results_{args.eval_model}.json')
97
+ report = lib.load_json(report_path)
98
+
99
+ if 'r2' in report['metrics']['val']:
100
+ score += report['metrics']['val']['r2']
101
+ else:
102
+ score += report['metrics']['val']['macro avg']['f1-score']
103
+
104
+ shutil.rmtree(exps_path / f"{trial.number}")
105
+
106
+ return score / n_datasets
107
+
108
+ study = optuna.create_study(
109
+ direction='maximize',
110
+ sampler=optuna.samplers.TPESampler(seed=0),
111
+ )
112
+
113
+ study.optimize(objective, n_trials=50, show_progress_bar=True)
114
+
115
+ best_config_path = parent_path / f'{prefix}_best/config.toml'
116
+ best_config = study.best_trial.user_attrs['config']
117
+ best_config["parent_dir"] = str(parent_path / f'{prefix}_best/')
118
+
119
+ os.makedirs(parent_path / f'{prefix}_best', exist_ok=True)
120
+ lib.dump_config(best_config, best_config_path)
121
+ lib.dump_json(optuna.importance.get_param_importances(study), parent_path / f'{prefix}_best/importance.json')
122
+
123
+ subprocess.run(['python3.9', f'{pipeline}', '--config', f'{best_config_path}', '--train', '--sample'], check=True)
124
+
125
+ if args.eval_seeds:
126
+ best_exp = str(parent_path / f'{prefix}_best/config.toml')
127
+ subprocess.run(['python3.9', f'{eval_seeds}', '--config', f'{best_exp}', '10', "ddpm", eval_type, args.eval_model, '5'], check=True)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/tune_evaluation_model.py ADDED
@@ -0,0 +1,145 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import optuna
2
+ import lib
3
+ import argparse
4
+ from eval_catboost import train_catboost
5
+ from eval_mlp import train_mlp
6
+ from pathlib import Path
7
+
8
+ parser = argparse.ArgumentParser()
9
+ parser.add_argument('ds_name', type=str)
10
+ parser.add_argument('model', type=str)
11
+ parser.add_argument('tune_type', type=str)
12
+ parser.add_argument('device', type=str)
13
+
14
+ args = parser.parse_args()
15
+ data_path = Path(f"data/{args.ds_name}")
16
+ best_params = None
17
+
18
+ assert args.tune_type in ("cv", "val")
19
+
20
+ def _suggest(trial: optuna.trial.Trial, distribution: str, label: str, *args):
21
+ return getattr(trial, f'suggest_{distribution}')(label, *args)
22
+
23
+ def _suggest_optional(trial: optuna.trial.Trial, distribution: str, label: str, *args):
24
+ if trial.suggest_categorical(f"optional_{label}", [True, False]):
25
+ return _suggest(trial, distribution, label, *args)
26
+ else:
27
+ return 0.0
28
+
29
+ def _suggest_mlp_layers(trial: optuna.trial.Trial, mlp_d_layers: list[int]):
30
+
31
+ min_n_layers, max_n_layers = mlp_d_layers[0], mlp_d_layers[1]
32
+ d_min, d_max = mlp_d_layers[2], mlp_d_layers[3]
33
+
34
+ def suggest_dim(name):
35
+ t = trial.suggest_int(name, d_min, d_max)
36
+ return 2 ** t
37
+
38
+
39
+ n_layers = trial.suggest_int('n_layers', min_n_layers, max_n_layers)
40
+ d_first = [suggest_dim('d_first')] if n_layers else []
41
+ d_middle = (
42
+ [suggest_dim('d_middle')] * (n_layers - 2)
43
+ if n_layers > 2
44
+ else []
45
+ )
46
+ d_last = [suggest_dim('d_last')] if n_layers > 1 else []
47
+ d_layers = d_first + d_middle + d_last
48
+
49
+ return d_layers
50
+
51
+ def suggest_mlp_params(trial):
52
+ params = {}
53
+ params["lr"] = trial.suggest_loguniform("lr", 5e-5, 0.005)
54
+ params["dropout"] = _suggest_optional(trial, "uniform", "dropout", 0.0, 0.5)
55
+ params["weight_decay"] = _suggest_optional(trial, "loguniform", "weight_decay", 1e-6, 1e-2)
56
+ params["d_layers"] = _suggest_mlp_layers(trial, [1, 8, 6, 10])
57
+
58
+ return params
59
+
60
+ def suggest_catboost_params(trial):
61
+ params = {}
62
+ params["learning_rate"] = trial.suggest_loguniform("learning_rate", 0.001, 1.0)
63
+ params["depth"] = trial.suggest_int("depth", 3, 10)
64
+ params["l2_leaf_reg"] = trial.suggest_uniform("l2_leaf_reg", 0.1, 10.0)
65
+ params["bagging_temperature"] = trial.suggest_uniform("bagging_temperature", 0.0, 1.0)
66
+ params["leaf_estimation_iterations"] = trial.suggest_int("leaf_estimation_iterations", 1, 10)
67
+
68
+ params = params | {
69
+ "iterations": 2000,
70
+ "early_stopping_rounds": 50,
71
+ "od_pval": 0.001,
72
+ "task_type": "CPU", # "GPU", may affect performance
73
+ "thread_count": 4,
74
+ # "devices": "0", # for GPU
75
+ }
76
+
77
+ return params
78
+
79
+ def objective(trial):
80
+ if args.model == "mlp":
81
+ params = suggest_mlp_params(trial)
82
+ train_func = train_mlp
83
+ T_dict = {
84
+ "seed": 0,
85
+ "normalization": "quantile",
86
+ "num_nan_policy": None,
87
+ "cat_nan_policy": None,
88
+ "cat_min_frequency": None,
89
+ "cat_encoding": "one-hot",
90
+ "y_policy": "default"
91
+ }
92
+ else:
93
+ params = suggest_catboost_params(trial)
94
+ train_func = train_catboost
95
+ T_dict = {
96
+ "seed": 0,
97
+ "normalization": None,
98
+ "num_nan_policy": None,
99
+ "cat_nan_policy": None,
100
+ "cat_min_frequency": None,
101
+ "cat_encoding": None,
102
+ "y_policy": "default"
103
+ }
104
+ trial.set_user_attr("params", params)
105
+ if args.tune_type == "cv":
106
+ score = 0.0
107
+ for fold in range(5):
108
+ metrics_report = train_func(
109
+ parent_dir=None,
110
+ real_data_path=data_path / f"kfolds/{fold}",
111
+ eval_type="real",
112
+ T_dict=T_dict,
113
+ params=params,
114
+ change_val=False,
115
+ device=args.device
116
+ )
117
+ score += metrics_report.get_val_score()
118
+ score /= 5
119
+
120
+ elif args.tune_type == "val":
121
+ metrics_report = train_func(
122
+ parent_dir=None,
123
+ real_data_path=data_path,
124
+ eval_type="real",
125
+ T_dict=T_dict,
126
+ params=params,
127
+ change_val=False,
128
+ device=args.device
129
+ )
130
+ score = metrics_report.get_val_score()
131
+
132
+ return score
133
+
134
+ study = optuna.create_study(
135
+ direction='maximize',
136
+ sampler=optuna.samplers.TPESampler(seed=0),
137
+ )
138
+
139
+ study.optimize(objective, n_trials=100, show_progress_bar=True)
140
+
141
+ bets_params = study.best_trial.user_attrs['params']
142
+
143
+ best_params_path = f"tuned_models/{args.model}/{args.ds_name}_{args.tune_type}.json"
144
+
145
+ lib.dump_json(bets_params, best_params_path)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/scripts/utils_train.py ADDED
@@ -0,0 +1,89 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import numpy as np
2
+ import os
3
+ import lib
4
+ from tab_ddpm.modules import MLPDiffusion, ResNetDiffusion
5
+
6
+ def get_model(
7
+ model_name,
8
+ model_params,
9
+ n_num_features,
10
+ category_sizes
11
+ ):
12
+ print(model_name)
13
+ if model_name == 'mlp':
14
+ model = MLPDiffusion(**model_params)
15
+ elif model_name == 'resnet':
16
+ model = ResNetDiffusion(**model_params)
17
+ else:
18
+ raise "Unknown model!"
19
+ return model
20
+
21
+ def update_ema(target_params, source_params, rate=0.999):
22
+ """
23
+ Update target parameters to be closer to those of source parameters using
24
+ an exponential moving average.
25
+ :param target_params: the target parameter sequence.
26
+ :param source_params: the source parameter sequence.
27
+ :param rate: the EMA rate (closer to 1 means slower).
28
+ """
29
+ for targ, src in zip(target_params, source_params):
30
+ targ.detach().mul_(rate).add_(src.detach(), alpha=1 - rate)
31
+
32
+ def concat_y_to_X(X, y):
33
+ if X is None:
34
+ return y.reshape(-1, 1)
35
+ return np.concatenate([y.reshape(-1, 1), X], axis=1)
36
+
37
+ def make_dataset(
38
+ data_path: str,
39
+ T: lib.Transformations,
40
+ num_classes: int,
41
+ is_y_cond: bool,
42
+ change_val: bool
43
+ ):
44
+ # classification
45
+ if num_classes > 0:
46
+ X_cat = {} if os.path.exists(os.path.join(data_path, 'X_cat_train.npy')) or not is_y_cond else None
47
+ X_num = {} if os.path.exists(os.path.join(data_path, 'X_num_train.npy')) else None
48
+ y = {}
49
+
50
+ for split in ['train']:
51
+ X_num_t, X_cat_t, y_t = lib.read_pure_data(data_path, split)
52
+ if X_num is not None:
53
+ X_num[split] = X_num_t
54
+ if not is_y_cond:
55
+ X_cat_t = concat_y_to_X(X_cat_t, y_t)
56
+ if X_cat is not None:
57
+ X_cat[split] = X_cat_t
58
+ y[split] = y_t
59
+ else:
60
+ # regression
61
+ X_cat = {} if os.path.exists(os.path.join(data_path, 'X_cat_train.npy')) else None
62
+ X_num = {} if os.path.exists(os.path.join(data_path, 'X_num_train.npy')) or not is_y_cond else None
63
+ y = {}
64
+
65
+ for split in ['train']:
66
+ X_num_t, X_cat_t, y_t = lib.read_pure_data(data_path, split)
67
+ if not is_y_cond:
68
+ X_num_t = concat_y_to_X(X_num_t, y_t)
69
+ if X_num is not None:
70
+ X_num[split] = X_num_t
71
+ if X_cat is not None:
72
+ X_cat[split] = X_cat_t
73
+ y[split] = y_t
74
+
75
+ info = lib.load_json(os.path.join(data_path, 'info.json'))
76
+
77
+ D = lib.Dataset(
78
+ X_num,
79
+ X_cat,
80
+ y,
81
+ y_info={},
82
+ task_type=lib.TaskType(info['task_type']),
83
+ n_classes=info.get('n_classes')
84
+ )
85
+
86
+ if change_val:
87
+ D = lib.change_val(D)
88
+
89
+ return lib.transform_dataset(D, T, None)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/smote/pipeline_smote.py ADDED
@@ -0,0 +1,68 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import tomli
2
+ import shutil
3
+ import os
4
+ import argparse
5
+ from sample_smote import sample_smote
6
+ from scripts.eval_catboost import train_catboost
7
+ # from scripts.eval_mlp import train_mlp
8
+ import zero
9
+ import lib
10
+
11
+ def load_config(path) :
12
+ with open(path, 'rb') as f:
13
+ return tomli.load(f)
14
+
15
+ def save_file(parent_dir, config_path):
16
+ try:
17
+ dst = os.path.join(parent_dir)
18
+ os.makedirs(os.path.dirname(dst), exist_ok=True)
19
+ shutil.copyfile(os.path.abspath(config_path), dst)
20
+ except shutil.SameFileError:
21
+ pass
22
+
23
+ def main():
24
+ parser = argparse.ArgumentParser()
25
+ parser.add_argument('--config', metavar='FILE')
26
+ parser.add_argument('--sample', action='store_true', default=False)
27
+ parser.add_argument('--eval', action='store_true', default=False)
28
+ parser.add_argument('--change_val', action='store_true', default=False)
29
+
30
+ args = parser.parse_args()
31
+ raw_config = lib.load_config(args.config)
32
+ timer = zero.Timer()
33
+ timer.run()
34
+ save_file(os.path.join(raw_config['parent_dir'], 'config.toml'), args.config)
35
+ if args.sample:
36
+ sample_smote(
37
+ parent_dir=raw_config['parent_dir'],
38
+ real_data_path=raw_config['real_data_path'],
39
+ **raw_config['smote_params'],
40
+ seed=raw_config['seed'],
41
+ change_val=args.change_val
42
+ )
43
+
44
+ save_file(os.path.join(raw_config['parent_dir'], 'info.json'), os.path.join(raw_config['real_data_path'], 'info.json'))
45
+ if args.eval:
46
+ if raw_config['eval']['type']['eval_model'] == 'catboost':
47
+ train_catboost(
48
+ parent_dir=raw_config['parent_dir'],
49
+ real_data_path=raw_config['real_data_path'],
50
+ eval_type=raw_config['eval']['type']['eval_type'],
51
+ T_dict=raw_config['eval']['T'],
52
+ seed=raw_config['seed'],
53
+ change_val=args.change_val
54
+ )
55
+ # elif raw_config['eval']['type']['eval_model'] == 'mlp':
56
+ # train_mlp(
57
+ # parent_dir=raw_config['parent_dir'],
58
+ # real_data_path=raw_config['real_data_path'],
59
+ # eval_type=raw_config['eval']['type']['eval_type'],
60
+ # T_dict=raw_config['eval']['T'],
61
+ # seed=raw_config['seed'],
62
+ # change_val=args.change_val
63
+ # )
64
+
65
+ print(f'Elapsed time: {str(timer)}')
66
+
67
+ if __name__ == '__main__':
68
+ main()
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/smote/sample_smote.py ADDED
@@ -0,0 +1,210 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import lib
3
+ import argparse
4
+ import numpy as np
5
+ from pathlib import Path
6
+ from typing import Union, Any
7
+ from imblearn.over_sampling import SMOTE, SMOTENC
8
+ from sklearn.model_selection import train_test_split
9
+ from sklearn.preprocessing import MinMaxScaler
10
+ from sklearn.utils import check_random_state
11
+
12
+ class MySMOTE(SMOTE):
13
+ def __init__(
14
+ self,
15
+ lam1=0.0,
16
+ lam2=1.0,
17
+ *,
18
+ sampling_strategy="auto",
19
+ random_state=None,
20
+ k_neighbors=5,
21
+ n_jobs=None,
22
+ ):
23
+ super().__init__(
24
+ sampling_strategy=sampling_strategy,
25
+ random_state=random_state,
26
+ k_neighbors=k_neighbors,
27
+ n_jobs=n_jobs,
28
+ )
29
+
30
+ self.lam1=lam1
31
+ self.lam2=lam2
32
+
33
+ def _make_samples(
34
+ self, X, y_dtype, y_type, nn_data, nn_num, n_samples, step_size=1.0
35
+ ):
36
+ random_state = check_random_state(self.random_state)
37
+ samples_indices = random_state.randint(low=0, high=nn_num.size, size=n_samples)
38
+
39
+ # np.newaxis for backwards compatability with random_state
40
+ steps = step_size * random_state.uniform(low=self.lam1, high=self.lam2, size=n_samples)[:, np.newaxis]
41
+ rows = np.floor_divide(samples_indices, nn_num.shape[1])
42
+ cols = np.mod(samples_indices, nn_num.shape[1])
43
+
44
+ X_new = self._generate_samples(X, nn_data, nn_num, rows, cols, steps)
45
+ y_new = np.full(n_samples, fill_value=y_type, dtype=y_dtype)
46
+ return X_new, y_new
47
+
48
+ class MySMOTENC(SMOTENC):
49
+ def __init__(
50
+ self,
51
+ lam1=0.0,
52
+ lam2=1.0,
53
+ *,
54
+ categorical_features,
55
+ sampling_strategy="auto",
56
+ random_state=None,
57
+ k_neighbors=5,
58
+ n_jobs=None
59
+ ):
60
+ super().__init__(
61
+ categorical_features=categorical_features,
62
+ sampling_strategy=sampling_strategy,
63
+ random_state=random_state,
64
+ k_neighbors=k_neighbors,
65
+ n_jobs=n_jobs,
66
+ )
67
+
68
+ self.lam1=0.0
69
+ self.lam2=1.0
70
+
71
+ def _make_samples(
72
+ self, X, y_dtype, y_type, nn_data, nn_num, n_samples, step_size=1.0, lam1=0.0, lam2=1.0
73
+ ):
74
+ random_state = check_random_state(self.random_state)
75
+ samples_indices = random_state.randint(low=0, high=nn_num.size, size=n_samples)
76
+
77
+ # np.newaxis for backwards compatability with random_state
78
+ steps = step_size * random_state.uniform(low=self.lam1, high=self.lam2, size=n_samples)[:, np.newaxis]
79
+ rows = np.floor_divide(samples_indices, nn_num.shape[1])
80
+ cols = np.mod(samples_indices, nn_num.shape[1])
81
+
82
+ X_new = self._generate_samples(X, nn_data, nn_num, rows, cols, steps)
83
+ y_new = np.full(n_samples, fill_value=y_type, dtype=y_dtype)
84
+ return X_new, y_new
85
+
86
+ def save_data(X, y, path, n_cat_features=0):
87
+ if n_cat_features > 0:
88
+ X_num = X[:, :-n_cat_features]
89
+ X_cat = X[:, -n_cat_features:]
90
+ else:
91
+ X_num = X
92
+ X_cat = None
93
+
94
+
95
+ np.save(path / "X_num_train", X_num.astype(float), allow_pickle=True)
96
+ np.save(path / "y_train", y, allow_pickle=True)
97
+ if X_cat is not None:
98
+ np.save(path / "X_cat_train", X_cat, allow_pickle=True)
99
+
100
+ def sample_smote(
101
+ parent_dir,
102
+ real_data_path,
103
+ eval_type = "synthetic",
104
+ k_neighbours = 5,
105
+ frac_samples = 1.0,
106
+ frac_lam_del = 0.0,
107
+ change_val = False,
108
+ save = True,
109
+ seed = 0
110
+ ):
111
+ lam1 = 0.0 + frac_lam_del / 2
112
+ lam2 = 1.0 - frac_lam_del / 2
113
+
114
+ real_data_path = Path(real_data_path)
115
+ info = lib.load_json(real_data_path / 'info.json')
116
+ is_regression = info['task_type'] == 'regression'
117
+
118
+ X_num = {}
119
+ X_cat = {}
120
+ y = {}
121
+
122
+ if change_val:
123
+ X_num['train'], X_cat['train'], y['train'], X_num['val'], X_cat['val'], y['val'] = lib.read_changed_val(real_data_path)
124
+ else:
125
+ X_num['train'], X_cat['train'], y['train'] = lib.read_pure_data(real_data_path, 'train')
126
+ X_num['val'], X_cat['val'], y['val'] = lib.read_pure_data(real_data_path, 'val')
127
+ X_num['test'], X_cat['test'], y['test'] = lib.read_pure_data(real_data_path, 'test')
128
+
129
+
130
+ X = {k: X_num[k] for k in X_num.keys()}
131
+
132
+ if is_regression:
133
+ X['train'] = np.concatenate([X["train"], y["train"].reshape(-1, 1)], axis=1, dtype=object)
134
+ y['train'] = np.where(y["train"] > np.median(y["train"]), 1, 0)
135
+
136
+ n_num_features = X['train'].shape[1]
137
+ n_cat_features = X_cat['train'].shape[1] if X_cat['train'] is not None else 0
138
+ cat_features = list(range(n_num_features, n_num_features+n_cat_features))
139
+ print(cat_features)
140
+
141
+ scaler = MinMaxScaler().fit(X["train"])
142
+ X["train"] = scaler.transform(X["train"]).astype(object)
143
+
144
+ if X_cat['train'] is not None:
145
+ for k in X_num.keys():
146
+ X[k] = np.concatenate([X[k], X_cat[k]], axis=1, dtype=object)
147
+
148
+ print("Before:", X['train'].shape)
149
+
150
+ if eval_type != 'real':
151
+ strat = {k: int((1 + frac_samples) * np.sum(y['train'] == k)) for k in np.unique(y['train'])}
152
+ print(strat)
153
+ if n_cat_features > 0:
154
+ sm = MySMOTENC(
155
+ lam1=lam1,
156
+ lam2=lam2,
157
+ random_state=seed,
158
+ k_neighbors=k_neighbours,
159
+ categorical_features=cat_features,
160
+ sampling_strategy=strat
161
+ )
162
+ else:
163
+ sm = MySMOTE(
164
+ lam1=lam1,
165
+ lam2=lam2,
166
+ random_state=seed,
167
+ k_neighbors=k_neighbours,
168
+ sampling_strategy=strat
169
+ )
170
+
171
+ X_res, y_res = sm.fit_resample(X['train'], y['train'])
172
+ if is_regression:
173
+ X_res[:, :X_num["train"].shape[1]+1] = scaler.inverse_transform(X_res[:, :X_num["train"].shape[1]+1])
174
+ y_res = X_res[:, X_num["train"].shape[1]]
175
+ X_res = np.delete(X_res, [X_num["train"].shape[1]], axis=1)
176
+ else:
177
+ X_res[:, :X_num["train"].shape[1]] = scaler.inverse_transform(X_res[:, :X_num["train"].shape[1]])
178
+ y_res = y_res.astype(int)
179
+
180
+ if eval_type == "synthetic":
181
+ X_res = X_res[X['train'].shape[0]:]
182
+ y_res = y_res[X['train'].shape[0]:]
183
+
184
+ disc_cols = []
185
+ for col in range(X_num["train"].shape[1]):
186
+ uniq_vals = np.unique(X_num["train"][:, col])
187
+ if len(uniq_vals) <= 32 and ((uniq_vals - np.round(uniq_vals)) == 0).all():
188
+ disc_cols.append(col)
189
+ if len(disc_cols):
190
+ X_res[:, :X_num["train"].shape[1]] = lib.round_columns(X_num["train"], X_res[:, :X_num["train"].shape[1]], disc_cols)
191
+
192
+ if save:
193
+ save_data(X_res, y_res, Path(parent_dir), n_cat_features)
194
+
195
+ X['train'] = X_res
196
+ y['train'] = y_res
197
+
198
+ return X, y
199
+
200
+ def main():
201
+ parser = argparse.ArgumentParser()
202
+ parser.add_argument('data_path', type=str)
203
+ parser.add_argument('method', type=str)
204
+
205
+ args = parser.parse_args()
206
+
207
+ sample_smote(args.data_path, args.method, save=False)
208
+
209
+ if __name__ == '__main__':
210
+ main()
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/smote/tune_smote.py ADDED
@@ -0,0 +1,98 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import optuna
2
+ import lib
3
+ from copy import deepcopy
4
+ import argparse
5
+ import tempfile
6
+ from pathlib import Path
7
+ import os
8
+ from scripts.eval_catboost import train_catboost
9
+ from sample_smote import sample_smote
10
+ import subprocess
11
+
12
+ parser = argparse.ArgumentParser()
13
+ parser.add_argument('data_path', type=str)
14
+ parser.add_argument('eval_type', type=str)
15
+
16
+ args = parser.parse_args()
17
+ real_data_path = args.data_path
18
+ eval_type = args.eval_type
19
+
20
+ def objective(trial):
21
+
22
+ k_neighbours = trial.suggest_int("k_neighbours", 5, 20)
23
+ frac_samples = 2 ** trial.suggest_int('frac_samples', -2, 3)
24
+
25
+ # z = \lam*x + (1 - \lam)*y, \lam ~ U[frac_lam_del/2, 1-frac_lam_del/2]
26
+ frac_lam_del = trial.suggest_float("frac_lam_del", 0.0, 0.95, step=0.05)
27
+
28
+ score = 0.0
29
+ with tempfile.TemporaryDirectory() as dir_:
30
+ dir_ = Path(dir_)
31
+ for seed in range(5):
32
+ sample_smote(
33
+ parent_dir=dir_,
34
+ real_data_path=real_data_path,
35
+ eval_type=eval_type,
36
+ frac_samples=frac_samples,
37
+ frac_lam_del=frac_lam_del,
38
+ k_neighbours=k_neighbours,
39
+ change_val=True,
40
+ seed=seed
41
+ )
42
+ T_dict = {
43
+ "seed": 0,
44
+ "normalization": None,
45
+ "num_nan_policy": None,
46
+ "cat_nan_policy": None,
47
+ "cat_min_frequency": None,
48
+ "cat_encoding": None,
49
+ "y_policy": "default"
50
+ }
51
+ metrics = train_catboost(
52
+ parent_dir=dir_,
53
+ real_data_path=real_data_path,
54
+ eval_type=eval_type,
55
+ T_dict=T_dict,
56
+ change_val=True,
57
+ seed = 0
58
+ )
59
+
60
+ score += metrics.get_val_score()
61
+
62
+ return score / 5
63
+
64
+ study = optuna.create_study(
65
+ direction='maximize',
66
+ sampler=optuna.samplers.TPESampler(seed=0),
67
+ )
68
+
69
+ study.optimize(objective, n_trials=5, show_progress_bar=True)
70
+
71
+ os.makedirs(f"exp/{Path(real_data_path).name}/smote/", exist_ok=True)
72
+ config = {
73
+ "parent_dir": f"exp/{Path(real_data_path).name}/smote/",
74
+ "real_data_path": real_data_path,
75
+ "seed": 0,
76
+ "smote_params": {},
77
+ "sample": {"seed": 0},
78
+ "eval": {
79
+ "type": {"eval_model": "catboost", "eval_type": eval_type},
80
+ "T": {
81
+ "seed": 0,
82
+ "normalization": None,
83
+ "num_nan_policy": None,
84
+ "cat_nan_policy": None,
85
+ "cat_min_frequency": None,
86
+ "cat_encoding": None,
87
+ "y_policy": "default"
88
+ },
89
+ }
90
+ }
91
+
92
+ config["smote_params"] = study.best_params
93
+ config["smote_params"]["frac_samples"] = 2 ** config["smote_params"]["frac_samples"]
94
+
95
+ lib.dump_config(config, config["parent_dir"]+"config.toml")
96
+
97
+ subprocess.run(['python3.9', "scripts/eval_seeds.py", '--config', f'{config["parent_dir"]+"config.toml"}',
98
+ '10', "smote", eval_type, "catboost", "5"], check=True)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__init__.py ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ from .gaussian_multinomial_diffsuion import * # noqa
2
+ from .modules import * # noqa
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/__init__.cpython-311.pyc ADDED
Binary file (304 Bytes). View file
 
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/gaussian_multinomial_diffsuion.cpython-311.pyc ADDED
Binary file (51 kB). View file
 
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/modules.cpython-311.pyc ADDED
Binary file (24.8 kB). View file
 
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/__pycache__/utils.cpython-311.pyc ADDED
Binary file (11.4 kB). View file
 
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/gaussian_multinomial_diffsuion.py ADDED
@@ -0,0 +1,993 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ """
2
+ Based on https://github.com/openai/guided-diffusion/blob/main/guided_diffusion
3
+ and https://github.com/ehoogeboom/multinomial_diffusion
4
+ """
5
+
6
+ import torch.nn.functional as F
7
+ import torch
8
+ import math
9
+
10
+ import numpy as np
11
+ from .utils import *
12
+
13
+ """
14
+ Based in part on: https://github.com/lucidrains/denoising-diffusion-pytorch/blob/5989f4c77eafcdc6be0fb4739f0f277a6dd7f7d8/denoising_diffusion_pytorch/denoising_diffusion_pytorch.py#L281
15
+ """
16
+ eps = 1e-8
17
+
18
+ def get_named_beta_schedule(schedule_name, num_diffusion_timesteps):
19
+ """
20
+ Get a pre-defined beta schedule for the given name.
21
+ The beta schedule library consists of beta schedules which remain similar
22
+ in the limit of num_diffusion_timesteps.
23
+ Beta schedules may be added, but should not be removed or changed once
24
+ they are committed to maintain backwards compatibility.
25
+ """
26
+ if schedule_name == "linear":
27
+ # Linear schedule from Ho et al, extended to work for any number of
28
+ # diffusion steps.
29
+ scale = 1000 / num_diffusion_timesteps
30
+ beta_start = scale * 0.0001
31
+ beta_end = scale * 0.02
32
+ return np.linspace(
33
+ beta_start, beta_end, num_diffusion_timesteps, dtype=np.float64
34
+ )
35
+ elif schedule_name == "cosine":
36
+ return betas_for_alpha_bar(
37
+ num_diffusion_timesteps,
38
+ lambda t: math.cos((t + 0.008) / 1.008 * math.pi / 2) ** 2,
39
+ )
40
+ else:
41
+ raise NotImplementedError(f"unknown beta schedule: {schedule_name}")
42
+
43
+
44
+ def betas_for_alpha_bar(num_diffusion_timesteps, alpha_bar, max_beta=0.999):
45
+ """
46
+ Create a beta schedule that discretizes the given alpha_t_bar function,
47
+ which defines the cumulative product of (1-beta) over time from t = [0,1].
48
+ :param num_diffusion_timesteps: the number of betas to produce.
49
+ :param alpha_bar: a lambda that takes an argument t from 0 to 1 and
50
+ produces the cumulative product of (1-beta) up to that
51
+ part of the diffusion process.
52
+ :param max_beta: the maximum beta to use; use values lower than 1 to
53
+ prevent singularities.
54
+ """
55
+ betas = []
56
+ for i in range(num_diffusion_timesteps):
57
+ t1 = i / num_diffusion_timesteps
58
+ t2 = (i + 1) / num_diffusion_timesteps
59
+ betas.append(min(1 - alpha_bar(t2) / alpha_bar(t1), max_beta))
60
+ return np.array(betas)
61
+
62
+ class GaussianMultinomialDiffusion(torch.nn.Module):
63
+ def __init__(
64
+ self,
65
+ num_classes: np.array,
66
+ num_numerical_features: int,
67
+ denoise_fn,
68
+ num_timesteps=1000,
69
+ gaussian_loss_type='mse',
70
+ gaussian_parametrization='eps',
71
+ multinomial_loss_type='vb_stochastic',
72
+ parametrization='x0',
73
+ scheduler='cosine',
74
+ device=torch.device('cpu')
75
+ ):
76
+
77
+ super(GaussianMultinomialDiffusion, self).__init__()
78
+ assert multinomial_loss_type in ('vb_stochastic', 'vb_all')
79
+ assert parametrization in ('x0', 'direct')
80
+
81
+ if multinomial_loss_type == 'vb_all':
82
+ print('Computing the loss using the bound on _all_ timesteps.'
83
+ ' This is expensive both in terms of memory and computation.')
84
+
85
+ self.num_numerical_features = num_numerical_features
86
+ self.num_classes = num_classes # it as a vector [K1, K2, ..., Km]
87
+ self.num_classes_expanded = torch.from_numpy(
88
+ np.concatenate([num_classes[i].repeat(num_classes[i]) for i in range(len(num_classes))])
89
+ ).to(device)
90
+
91
+ self.slices_for_classes = [np.arange(self.num_classes[0])]
92
+ offsets = np.cumsum(self.num_classes)
93
+ for i in range(1, len(offsets)):
94
+ self.slices_for_classes.append(np.arange(offsets[i - 1], offsets[i]))
95
+ self.offsets = torch.from_numpy(np.append([0], offsets)).to(device)
96
+
97
+ self._denoise_fn = denoise_fn
98
+ self.gaussian_loss_type = gaussian_loss_type
99
+ self.gaussian_parametrization = gaussian_parametrization
100
+ self.multinomial_loss_type = multinomial_loss_type
101
+ self.num_timesteps = num_timesteps
102
+ self.parametrization = parametrization
103
+ self.scheduler = scheduler
104
+
105
+ alphas = 1. - get_named_beta_schedule(scheduler, num_timesteps)
106
+ alphas = torch.tensor(alphas.astype('float64'))
107
+ betas = 1. - alphas
108
+
109
+ log_alpha = np.log(alphas)
110
+ log_cumprod_alpha = np.cumsum(log_alpha)
111
+
112
+ log_1_min_alpha = log_1_min_a(log_alpha)
113
+ log_1_min_cumprod_alpha = log_1_min_a(log_cumprod_alpha)
114
+
115
+ alphas_cumprod = np.cumprod(alphas, axis=0)
116
+ alphas_cumprod_prev = torch.tensor(np.append(1.0, alphas_cumprod[:-1]))
117
+ alphas_cumprod_next = torch.tensor(np.append(alphas_cumprod[1:], 0.0))
118
+ sqrt_alphas_cumprod = np.sqrt(alphas_cumprod)
119
+ sqrt_one_minus_alphas_cumprod = np.sqrt(1.0 - alphas_cumprod)
120
+ sqrt_recip_alphas_cumprod = np.sqrt(1.0 / alphas_cumprod)
121
+ sqrt_recipm1_alphas_cumprod = np.sqrt(1.0 / alphas_cumprod - 1)
122
+
123
+ # Gaussian diffusion
124
+
125
+ self.posterior_variance = (
126
+ betas * (1.0 - alphas_cumprod_prev) / (1.0 - alphas_cumprod)
127
+ )
128
+ self.posterior_log_variance_clipped = torch.from_numpy(
129
+ np.log(np.append(self.posterior_variance[1], self.posterior_variance[1:]))
130
+ ).float().to(device)
131
+ self.posterior_mean_coef1 = (
132
+ betas * np.sqrt(alphas_cumprod_prev) / (1.0 - alphas_cumprod)
133
+ ).float().to(device)
134
+ self.posterior_mean_coef2 = (
135
+ (1.0 - alphas_cumprod_prev)
136
+ * np.sqrt(alphas.numpy())
137
+ / (1.0 - alphas_cumprod)
138
+ ).float().to(device)
139
+
140
+ assert log_add_exp(log_alpha, log_1_min_alpha).abs().sum().item() < 1.e-5
141
+ assert log_add_exp(log_cumprod_alpha, log_1_min_cumprod_alpha).abs().sum().item() < 1e-5
142
+ assert (np.cumsum(log_alpha) - log_cumprod_alpha).abs().sum().item() < 1.e-5
143
+
144
+ # Convert to float32 and register buffers.
145
+ self.register_buffer('alphas', alphas.float().to(device))
146
+ self.register_buffer('log_alpha', log_alpha.float().to(device))
147
+ self.register_buffer('log_1_min_alpha', log_1_min_alpha.float().to(device))
148
+ self.register_buffer('log_1_min_cumprod_alpha', log_1_min_cumprod_alpha.float().to(device))
149
+ self.register_buffer('log_cumprod_alpha', log_cumprod_alpha.float().to(device))
150
+ self.register_buffer('alphas_cumprod', alphas_cumprod.float().to(device))
151
+ self.register_buffer('alphas_cumprod_prev', alphas_cumprod_prev.float().to(device))
152
+ self.register_buffer('alphas_cumprod_next', alphas_cumprod_next.float().to(device))
153
+ self.register_buffer('sqrt_alphas_cumprod', sqrt_alphas_cumprod.float().to(device))
154
+ self.register_buffer('sqrt_one_minus_alphas_cumprod', sqrt_one_minus_alphas_cumprod.float().to(device))
155
+ self.register_buffer('sqrt_recip_alphas_cumprod', sqrt_recip_alphas_cumprod.float().to(device))
156
+ self.register_buffer('sqrt_recipm1_alphas_cumprod', sqrt_recipm1_alphas_cumprod.float().to(device))
157
+
158
+ self.register_buffer('Lt_history', torch.zeros(num_timesteps))
159
+ self.register_buffer('Lt_count', torch.zeros(num_timesteps))
160
+
161
+ # Gaussian part
162
+ def gaussian_q_mean_variance(self, x_start, t):
163
+ mean = (
164
+ extract(self.sqrt_alphas_cumprod, t, x_start.shape) * x_start
165
+ )
166
+ variance = extract(1.0 - self.alphas_cumprod, t, x_start.shape)
167
+ log_variance = extract(
168
+ self.log_1_min_cumprod_alpha, t, x_start.shape
169
+ )
170
+ return mean, variance, log_variance
171
+
172
+ def gaussian_q_sample(self, x_start, t, noise=None):
173
+ if noise is None:
174
+ noise = torch.randn_like(x_start)
175
+ assert noise.shape == x_start.shape
176
+ return (
177
+ extract(self.sqrt_alphas_cumprod, t, x_start.shape) * x_start
178
+ + extract(self.sqrt_one_minus_alphas_cumprod, t, x_start.shape)
179
+ * noise
180
+ )
181
+
182
+ def gaussian_q_posterior_mean_variance(self, x_start, x_t, t):
183
+ assert x_start.shape == x_t.shape
184
+ posterior_mean = (
185
+ extract(self.posterior_mean_coef1, t, x_t.shape) * x_start
186
+ + extract(self.posterior_mean_coef2, t, x_t.shape) * x_t
187
+ )
188
+ posterior_variance = extract(self.posterior_variance, t, x_t.shape)
189
+ posterior_log_variance_clipped = extract(
190
+ self.posterior_log_variance_clipped, t, x_t.shape
191
+ )
192
+ assert (
193
+ posterior_mean.shape[0]
194
+ == posterior_variance.shape[0]
195
+ == posterior_log_variance_clipped.shape[0]
196
+ == x_start.shape[0]
197
+ )
198
+ return posterior_mean, posterior_variance, posterior_log_variance_clipped
199
+
200
+ def gaussian_p_mean_variance(
201
+ self, model_output, x, t, clip_denoised=False, denoised_fn=None, model_kwargs=None
202
+ ):
203
+ if model_kwargs is None:
204
+ model_kwargs = {}
205
+
206
+ B, C = x.shape[:2]
207
+ assert t.shape == (B,)
208
+
209
+ model_variance = torch.cat([self.posterior_variance[1].unsqueeze(0).to(x.device), (1. - self.alphas)[1:]], dim=0)
210
+ # model_variance = self.posterior_variance.to(x.device)
211
+ model_log_variance = torch.log(model_variance)
212
+
213
+ model_variance = extract(model_variance, t, x.shape)
214
+ model_log_variance = extract(model_log_variance, t, x.shape)
215
+
216
+
217
+ if self.gaussian_parametrization == 'eps':
218
+ pred_xstart = self._predict_xstart_from_eps(x_t=x, t=t, eps=model_output)
219
+ elif self.gaussian_parametrization == 'x0':
220
+ pred_xstart = model_output
221
+ else:
222
+ raise NotImplementedError
223
+
224
+ model_mean, _, _ = self.gaussian_q_posterior_mean_variance(
225
+ x_start=pred_xstart, x_t=x, t=t
226
+ )
227
+
228
+ assert (
229
+ model_mean.shape == model_log_variance.shape == pred_xstart.shape == x.shape
230
+ ), f'{model_mean.shape}, {model_log_variance.shape}, {pred_xstart.shape}, {x.shape}'
231
+
232
+ return {
233
+ "mean": model_mean,
234
+ "variance": model_variance,
235
+ "log_variance": model_log_variance,
236
+ "pred_xstart": pred_xstart,
237
+ }
238
+
239
+ def _vb_terms_bpd(
240
+ self, model_output, x_start, x_t, t, clip_denoised=False, model_kwargs=None
241
+ ):
242
+ true_mean, _, true_log_variance_clipped = self.gaussian_q_posterior_mean_variance(
243
+ x_start=x_start, x_t=x_t, t=t
244
+ )
245
+ out = self.gaussian_p_mean_variance(
246
+ model_output, x_t, t, clip_denoised=clip_denoised, model_kwargs=model_kwargs
247
+ )
248
+ kl = normal_kl(
249
+ true_mean, true_log_variance_clipped, out["mean"], out["log_variance"]
250
+ )
251
+ kl = mean_flat(kl) / np.log(2.0)
252
+
253
+ decoder_nll = -discretized_gaussian_log_likelihood(
254
+ x_start, means=out["mean"], log_scales=0.5 * out["log_variance"]
255
+ )
256
+ assert decoder_nll.shape == x_start.shape
257
+ decoder_nll = mean_flat(decoder_nll) / np.log(2.0)
258
+
259
+ # At the first timestep return the decoder NLL,
260
+ # otherwise return KL(q(x_{t-1}|x_t,x_0) || p(x_{t-1}|x_t))
261
+ output = torch.where((t == 0), decoder_nll, kl)
262
+ return {"output": output, "pred_xstart": out["pred_xstart"], "out_mean": out["mean"], "true_mean": true_mean}
263
+
264
+ def _prior_gaussian(self, x_start):
265
+ """
266
+ Get the prior KL term for the variational lower-bound, measured in
267
+ bits-per-dim.
268
+
269
+ This term can't be optimized, as it only depends on the encoder.
270
+
271
+ :param x_start: the [N x C x ...] tensor of inputs.
272
+ :return: a batch of [N] KL values (in bits), one per batch element.
273
+ """
274
+ batch_size = x_start.shape[0]
275
+ t = torch.tensor([self.num_timesteps - 1] * batch_size, device=x_start.device)
276
+ qt_mean, _, qt_log_variance = self.gaussian_q_mean_variance(x_start, t)
277
+ kl_prior = normal_kl(
278
+ mean1=qt_mean, logvar1=qt_log_variance, mean2=0.0, logvar2=0.0
279
+ )
280
+ return mean_flat(kl_prior) / np.log(2.0)
281
+
282
+ def _gaussian_loss(self, model_out, x_start, x_t, t, noise, model_kwargs=None):
283
+ if model_kwargs is None:
284
+ model_kwargs = {}
285
+
286
+ terms = {}
287
+ if self.gaussian_loss_type == 'mse':
288
+ terms["loss"] = mean_flat((noise - model_out) ** 2)
289
+ elif self.gaussian_loss_type == 'kl':
290
+ terms["loss"] = self._vb_terms_bpd(
291
+ model_output=model_out,
292
+ x_start=x_start,
293
+ x_t=x_t,
294
+ t=t,
295
+ clip_denoised=False,
296
+ model_kwargs=model_kwargs,
297
+ )["output"]
298
+
299
+
300
+ return terms['loss']
301
+
302
+ def _predict_xstart_from_eps(self, x_t, t, eps):
303
+ assert x_t.shape == eps.shape
304
+ return (
305
+ extract(self.sqrt_recip_alphas_cumprod, t, x_t.shape) * x_t
306
+ - extract(self.sqrt_recipm1_alphas_cumprod, t, x_t.shape) * eps
307
+ )
308
+
309
+ def _predict_eps_from_xstart(self, x_t, t, pred_xstart):
310
+ return (
311
+ extract(self.sqrt_recip_alphas_cumprod, t, x_t.shape) * x_t
312
+ - pred_xstart
313
+ ) / extract(self.sqrt_recipm1_alphas_cumprod, t, x_t.shape)
314
+
315
+ def gaussian_p_sample(
316
+ self,
317
+ model_out,
318
+ x,
319
+ t,
320
+ clip_denoised=False,
321
+ denoised_fn=None,
322
+ model_kwargs=None,
323
+ ):
324
+ out = self.gaussian_p_mean_variance(
325
+ model_out,
326
+ x,
327
+ t,
328
+ clip_denoised=clip_denoised,
329
+ denoised_fn=denoised_fn,
330
+ model_kwargs=model_kwargs,
331
+ )
332
+ noise = torch.randn_like(x)
333
+ nonzero_mask = (
334
+ (t != 0).float().view(-1, *([1] * (len(x.shape) - 1)))
335
+ ) # no noise when t == 0
336
+
337
+ sample = out["mean"] + nonzero_mask * torch.exp(0.5 * out["log_variance"]) * noise
338
+ return {"sample": sample, "pred_xstart": out["pred_xstart"]}
339
+
340
+ # Multinomial part
341
+
342
+ def multinomial_kl(self, log_prob1, log_prob2):
343
+ kl = (log_prob1.exp() * (log_prob1 - log_prob2)).sum(dim=1)
344
+ return kl
345
+
346
+ def q_pred_one_timestep(self, log_x_t, t):
347
+ log_alpha_t = extract(self.log_alpha, t, log_x_t.shape)
348
+ log_1_min_alpha_t = extract(self.log_1_min_alpha, t, log_x_t.shape)
349
+
350
+ # alpha_t * E[xt] + (1 - alpha_t) 1 / K
351
+ log_probs = log_add_exp(
352
+ log_x_t + log_alpha_t,
353
+ log_1_min_alpha_t - torch.log(self.num_classes_expanded)
354
+ )
355
+
356
+ return log_probs
357
+
358
+ def q_pred(self, log_x_start, t):
359
+ log_cumprod_alpha_t = extract(self.log_cumprod_alpha, t, log_x_start.shape)
360
+ log_1_min_cumprod_alpha = extract(self.log_1_min_cumprod_alpha, t, log_x_start.shape)
361
+
362
+ log_probs = log_add_exp(
363
+ log_x_start + log_cumprod_alpha_t,
364
+ log_1_min_cumprod_alpha - torch.log(self.num_classes_expanded)
365
+ )
366
+
367
+ return log_probs
368
+
369
+ def predict_start(self, model_out, log_x_t, t, out_dict):
370
+
371
+ # model_out = self._denoise_fn(x_t, t.to(x_t.device), **out_dict)
372
+
373
+ assert model_out.size(0) == log_x_t.size(0)
374
+ assert model_out.size(1) == self.num_classes.sum(), f'{model_out.size()}'
375
+
376
+ log_pred = torch.empty_like(model_out)
377
+ for ix in self.slices_for_classes:
378
+ log_pred[:, ix] = F.log_softmax(model_out[:, ix], dim=1)
379
+ return log_pred
380
+
381
+ def q_posterior(self, log_x_start, log_x_t, t):
382
+ # q(xt-1 | xt, x0) = q(xt | xt-1, x0) * q(xt-1 | x0) / q(xt | x0)
383
+ # where q(xt | xt-1, x0) = q(xt | xt-1).
384
+
385
+ # EV_log_qxt_x0 = self.q_pred(log_x_start, t)
386
+
387
+ # print('sum exp', EV_log_qxt_x0.exp().sum(1).mean())
388
+ # assert False
389
+
390
+ # log_qxt_x0 = (log_x_t.exp() * EV_log_qxt_x0).sum(dim=1)
391
+ t_minus_1 = t - 1
392
+ # Remove negative values, will not be used anyway for final decoder
393
+ t_minus_1 = torch.where(t_minus_1 < 0, torch.zeros_like(t_minus_1), t_minus_1)
394
+ log_EV_qxtmin_x0 = self.q_pred(log_x_start, t_minus_1)
395
+
396
+ num_axes = (1,) * (len(log_x_start.size()) - 1)
397
+ t_broadcast = t.to(log_x_start.device).view(-1, *num_axes) * torch.ones_like(log_x_start)
398
+ log_EV_qxtmin_x0 = torch.where(t_broadcast == 0, log_x_start, log_EV_qxtmin_x0.to(torch.float32))
399
+
400
+ # unnormed_logprobs = log_EV_qxtmin_x0 +
401
+ # log q_pred_one_timestep(x_t, t)
402
+ # Note: _NOT_ x_tmin1, which is how the formula is typically used!!!
403
+ # Not very easy to see why this is true. But it is :)
404
+ unnormed_logprobs = log_EV_qxtmin_x0 + self.q_pred_one_timestep(log_x_t, t)
405
+
406
+ log_EV_xtmin_given_xt_given_xstart = \
407
+ unnormed_logprobs \
408
+ - sliced_logsumexp(unnormed_logprobs, self.offsets)
409
+
410
+ return log_EV_xtmin_given_xt_given_xstart
411
+
412
+ def p_pred(self, model_out, log_x, t, out_dict):
413
+ if self.parametrization == 'x0':
414
+ log_x_recon = self.predict_start(model_out, log_x, t=t, out_dict=out_dict)
415
+ log_model_pred = self.q_posterior(
416
+ log_x_start=log_x_recon, log_x_t=log_x, t=t)
417
+ elif self.parametrization == 'direct':
418
+ log_model_pred = self.predict_start(model_out, log_x, t=t, out_dict=out_dict)
419
+ else:
420
+ raise ValueError
421
+ return log_model_pred
422
+
423
+ @torch.no_grad()
424
+ def p_sample(self, model_out, log_x, t, out_dict):
425
+ model_log_prob = self.p_pred(model_out, log_x=log_x, t=t, out_dict=out_dict)
426
+ out = self.log_sample_categorical(model_log_prob)
427
+ return out
428
+
429
+ @torch.no_grad()
430
+ def p_sample_loop(self, shape, out_dict):
431
+ device = self.log_alpha.device
432
+
433
+ b = shape[0]
434
+ # start with random normal image.
435
+ img = torch.randn(shape, device=device)
436
+
437
+ for i in reversed(range(1, self.num_timesteps)):
438
+ img = self.p_sample(img, torch.full((b,), i, device=device, dtype=torch.long), out_dict)
439
+ return img
440
+
441
+ @torch.no_grad()
442
+ def _sample(self, image_size, out_dict, batch_size = 16):
443
+ return self.p_sample_loop((batch_size, 3, image_size, image_size), out_dict)
444
+
445
+ @torch.no_grad()
446
+ def interpolate(self, x1, x2, t = None, lam = 0.5):
447
+ b, *_, device = *x1.shape, x1.device
448
+ t = default(t, self.num_timesteps - 1)
449
+
450
+ assert x1.shape == x2.shape
451
+
452
+ t_batched = torch.stack([torch.tensor(t, device=device)] * b)
453
+ xt1, xt2 = map(lambda x: self.q_sample(x, t=t_batched), (x1, x2))
454
+
455
+ img = (1 - lam) * xt1 + lam * xt2
456
+ for i in reversed(range(0, t)):
457
+ img = self.p_sample(img, torch.full((b,), i, device=device, dtype=torch.long))
458
+
459
+ return img
460
+
461
+ def log_sample_categorical(self, logits):
462
+ full_sample = []
463
+ for i in range(len(self.num_classes)):
464
+ one_class_logits = logits[:, self.slices_for_classes[i]]
465
+ uniform = torch.rand_like(one_class_logits)
466
+ gumbel_noise = -torch.log(-torch.log(uniform + 1e-30) + 1e-30)
467
+ sample = (gumbel_noise + one_class_logits).argmax(dim=1)
468
+ full_sample.append(sample.unsqueeze(1))
469
+ full_sample = torch.cat(full_sample, dim=1)
470
+ log_sample = index_to_log_onehot(full_sample, self.num_classes)
471
+ return log_sample
472
+
473
+ def q_sample(self, log_x_start, t):
474
+ log_EV_qxt_x0 = self.q_pred(log_x_start, t)
475
+
476
+ log_sample = self.log_sample_categorical(log_EV_qxt_x0)
477
+
478
+ return log_sample
479
+
480
+ def nll(self, log_x_start, out_dict):
481
+ b = log_x_start.size(0)
482
+ device = log_x_start.device
483
+ loss = 0
484
+ for t in range(0, self.num_timesteps):
485
+ t_array = (torch.ones(b, device=device) * t).long()
486
+
487
+ kl = self.compute_Lt(
488
+ log_x_start=log_x_start,
489
+ log_x_t=self.q_sample(log_x_start=log_x_start, t=t_array),
490
+ t=t_array,
491
+ out_dict=out_dict)
492
+
493
+ loss += kl
494
+
495
+ loss += self.kl_prior(log_x_start)
496
+
497
+ return loss
498
+
499
+ def kl_prior(self, log_x_start):
500
+ b = log_x_start.size(0)
501
+ device = log_x_start.device
502
+ ones = torch.ones(b, device=device).long()
503
+
504
+ log_qxT_prob = self.q_pred(log_x_start, t=(self.num_timesteps - 1) * ones)
505
+ log_half_prob = -torch.log(self.num_classes_expanded * torch.ones_like(log_qxT_prob))
506
+
507
+ kl_prior = self.multinomial_kl(log_qxT_prob, log_half_prob)
508
+ return sum_except_batch(kl_prior)
509
+
510
+ def compute_Lt(self, model_out, log_x_start, log_x_t, t, out_dict, detach_mean=False):
511
+ log_true_prob = self.q_posterior(
512
+ log_x_start=log_x_start, log_x_t=log_x_t, t=t)
513
+ log_model_prob = self.p_pred(model_out, log_x=log_x_t, t=t, out_dict=out_dict)
514
+
515
+ if detach_mean:
516
+ log_model_prob = log_model_prob.detach()
517
+
518
+ kl = self.multinomial_kl(log_true_prob, log_model_prob)
519
+ kl = sum_except_batch(kl)
520
+
521
+ decoder_nll = -log_categorical(log_x_start, log_model_prob)
522
+ decoder_nll = sum_except_batch(decoder_nll)
523
+
524
+ mask = (t == torch.zeros_like(t)).float()
525
+ loss = mask * decoder_nll + (1. - mask) * kl
526
+
527
+ return loss
528
+
529
+ def sample_time(self, b, device, method='uniform'):
530
+ if method == 'importance':
531
+ if not (self.Lt_count > 10).all():
532
+ return self.sample_time(b, device, method='uniform')
533
+
534
+ Lt_sqrt = torch.sqrt(self.Lt_history + 1e-10) + 0.0001
535
+ Lt_sqrt[0] = Lt_sqrt[1] # Overwrite decoder term with L1.
536
+ pt_all = (Lt_sqrt / Lt_sqrt.sum()).to(device)
537
+
538
+ t = torch.multinomial(pt_all, num_samples=b, replacement=True).to(device)
539
+
540
+ pt = pt_all.gather(dim=0, index=t)
541
+
542
+ return t, pt
543
+
544
+ elif method == 'uniform':
545
+ t = torch.randint(0, self.num_timesteps, (b,), device=device).long()
546
+
547
+ pt = torch.ones_like(t).float() / self.num_timesteps
548
+ return t, pt
549
+ else:
550
+ raise ValueError
551
+
552
+ def _multinomial_loss(self, model_out, log_x_start, log_x_t, t, pt, out_dict):
553
+
554
+ if self.multinomial_loss_type == 'vb_stochastic':
555
+ kl = self.compute_Lt(
556
+ model_out, log_x_start, log_x_t, t, out_dict
557
+ )
558
+ kl_prior = self.kl_prior(log_x_start)
559
+ # Upweigh loss term of the kl
560
+ vb_loss = kl / pt + kl_prior
561
+
562
+ return vb_loss
563
+
564
+ elif self.multinomial_loss_type == 'vb_all':
565
+ # Expensive, dont do it ;).
566
+ # DEPRECATED
567
+ return -self.nll(log_x_start)
568
+ else:
569
+ raise ValueError()
570
+
571
+ def log_prob(self, x, out_dict):
572
+ b, device = x.size(0), x.device
573
+ if self.training:
574
+ return self._multinomial_loss(x, out_dict)
575
+
576
+ else:
577
+ log_x_start = index_to_log_onehot(x, self.num_classes)
578
+
579
+ t, pt = self.sample_time(b, device, 'importance')
580
+
581
+ kl = self.compute_Lt(
582
+ log_x_start, self.q_sample(log_x_start=log_x_start, t=t), t, out_dict)
583
+
584
+ kl_prior = self.kl_prior(log_x_start)
585
+
586
+ # Upweigh loss term of the kl
587
+ loss = kl / pt + kl_prior
588
+
589
+ return -loss
590
+
591
+ def mixed_loss(self, x, out_dict):
592
+ b = x.shape[0]
593
+ device = x.device
594
+ t, pt = self.sample_time(b, device, 'uniform')
595
+
596
+ x_num = x[:, :self.num_numerical_features]
597
+ x_cat = x[:, self.num_numerical_features:]
598
+
599
+ x_num_t = x_num
600
+ log_x_cat_t = x_cat
601
+ if x_num.shape[1] > 0:
602
+ noise = torch.randn_like(x_num)
603
+ x_num_t = self.gaussian_q_sample(x_num, t, noise=noise)
604
+ if x_cat.shape[1] > 0:
605
+ log_x_cat = index_to_log_onehot(x_cat.long(), self.num_classes)
606
+ log_x_cat_t = self.q_sample(log_x_start=log_x_cat, t=t)
607
+
608
+ x_in = torch.cat([x_num_t, log_x_cat_t], dim=1)
609
+
610
+ model_out = self._denoise_fn(
611
+ x_in,
612
+ t,
613
+ **out_dict
614
+ )
615
+
616
+ model_out_num = model_out[:, :self.num_numerical_features]
617
+ model_out_cat = model_out[:, self.num_numerical_features:]
618
+
619
+ loss_multi = torch.zeros((1,)).float()
620
+ loss_gauss = torch.zeros((1,)).float()
621
+ if x_cat.shape[1] > 0:
622
+ loss_multi = self._multinomial_loss(model_out_cat, log_x_cat, log_x_cat_t, t, pt, out_dict) / len(self.num_classes)
623
+
624
+ if x_num.shape[1] > 0:
625
+ loss_gauss = self._gaussian_loss(model_out_num, x_num, x_num_t, t, noise)
626
+
627
+ # loss_multi = torch.where(out_dict['y'] == 1, loss_multi, 2 * loss_multi)
628
+ # loss_gauss = torch.where(out_dict['y'] == 1, loss_gauss, 2 * loss_gauss)
629
+
630
+ return loss_multi.mean(), loss_gauss.mean()
631
+
632
+ @torch.no_grad()
633
+ def mixed_elbo(self, x0, out_dict):
634
+ b = x0.size(0)
635
+ device = x0.device
636
+
637
+ x_num = x0[:, :self.num_numerical_features]
638
+ x_cat = x0[:, self.num_numerical_features:]
639
+ has_cat = x_cat.shape[1] > 0
640
+ if has_cat:
641
+ log_x_cat = index_to_log_onehot(x_cat.long(), self.num_classes).to(device)
642
+
643
+ gaussian_loss = []
644
+ xstart_mse = []
645
+ mse = []
646
+ mu_mse = []
647
+ out_mean = []
648
+ true_mean = []
649
+ multinomial_loss = []
650
+ for t in range(self.num_timesteps):
651
+ t_array = (torch.ones(b, device=device) * t).long()
652
+ noise = torch.randn_like(x_num)
653
+
654
+ x_num_t = self.gaussian_q_sample(x_start=x_num, t=t_array, noise=noise)
655
+ if has_cat:
656
+ log_x_cat_t = self.q_sample(log_x_start=log_x_cat, t=t_array)
657
+ else:
658
+ log_x_cat_t = x_cat
659
+
660
+ model_out = self._denoise_fn(
661
+ torch.cat([x_num_t, log_x_cat_t], dim=1),
662
+ t_array,
663
+ **out_dict
664
+ )
665
+
666
+ model_out_num = model_out[:, :self.num_numerical_features]
667
+ model_out_cat = model_out[:, self.num_numerical_features:]
668
+
669
+ kl = torch.tensor([0.0])
670
+ if has_cat:
671
+ kl = self.compute_Lt(
672
+ model_out=model_out_cat,
673
+ log_x_start=log_x_cat,
674
+ log_x_t=log_x_cat_t,
675
+ t=t_array,
676
+ out_dict=out_dict
677
+ )
678
+
679
+ out = self._vb_terms_bpd(
680
+ model_out_num,
681
+ x_start=x_num,
682
+ x_t=x_num_t,
683
+ t=t_array,
684
+ clip_denoised=False
685
+ )
686
+
687
+ multinomial_loss.append(kl)
688
+ gaussian_loss.append(out["output"])
689
+ xstart_mse.append(mean_flat((out["pred_xstart"] - x_num) ** 2))
690
+ # mu_mse.append(mean_flat(out["mean_mse"]))
691
+ out_mean.append(mean_flat(out["out_mean"]))
692
+ true_mean.append(mean_flat(out["true_mean"]))
693
+
694
+ eps = self._predict_eps_from_xstart(x_num_t, t_array, out["pred_xstart"])
695
+ mse.append(mean_flat((eps - noise) ** 2))
696
+
697
+ gaussian_loss = torch.stack(gaussian_loss, dim=1)
698
+ multinomial_loss = torch.stack(multinomial_loss, dim=1)
699
+ xstart_mse = torch.stack(xstart_mse, dim=1)
700
+ mse = torch.stack(mse, dim=1)
701
+ # mu_mse = torch.stack(mu_mse, dim=1)
702
+ out_mean = torch.stack(out_mean, dim=1)
703
+ true_mean = torch.stack(true_mean, dim=1)
704
+
705
+
706
+
707
+ prior_gauss = self._prior_gaussian(x_num)
708
+
709
+ prior_multin = torch.tensor([0.0])
710
+ if has_cat:
711
+ prior_multin = self.kl_prior(log_x_cat)
712
+
713
+ total_gauss = gaussian_loss.sum(dim=1) + prior_gauss
714
+ total_multin = multinomial_loss.sum(dim=1) + prior_multin
715
+ return {
716
+ "total_gaussian": total_gauss,
717
+ "total_multinomial": total_multin,
718
+ "losses_gaussian": gaussian_loss,
719
+ "losses_multinimial": multinomial_loss,
720
+ "xstart_mse": xstart_mse,
721
+ "mse": mse,
722
+ # "mu_mse": mu_mse
723
+ "out_mean": out_mean,
724
+ "true_mean": true_mean
725
+ }
726
+
727
+ @torch.no_grad()
728
+ def gaussian_ddim_step(
729
+ self,
730
+ model_out_num,
731
+ x,
732
+ t,
733
+ clip_denoised=False,
734
+ denoised_fn=None,
735
+ eta=0.0
736
+ ):
737
+ out = self.gaussian_p_mean_variance(
738
+ model_out_num,
739
+ x,
740
+ t,
741
+ clip_denoised=clip_denoised,
742
+ denoised_fn=denoised_fn,
743
+ model_kwargs=None,
744
+ )
745
+
746
+ eps = self._predict_eps_from_xstart(x, t, out["pred_xstart"])
747
+
748
+ alpha_bar = extract(self.alphas_cumprod, t, x.shape)
749
+ alpha_bar_prev = extract(self.alphas_cumprod_prev, t, x.shape)
750
+ sigma = (
751
+ eta
752
+ * torch.sqrt((1 - alpha_bar_prev) / (1 - alpha_bar))
753
+ * torch.sqrt(1 - alpha_bar / alpha_bar_prev)
754
+ )
755
+
756
+ noise = torch.randn_like(x)
757
+ mean_pred = (
758
+ out["pred_xstart"] * torch.sqrt(alpha_bar_prev)
759
+ + torch.sqrt(1 - alpha_bar_prev - sigma ** 2) * eps
760
+ )
761
+ nonzero_mask = (
762
+ (t != 0).float().view(-1, *([1] * (len(x.shape) - 1)))
763
+ ) # no noise when t == 0
764
+ sample = mean_pred + nonzero_mask * sigma * noise
765
+
766
+ return sample
767
+
768
+ @torch.no_grad()
769
+ def gaussian_ddim_sample(
770
+ self,
771
+ noise,
772
+ T,
773
+ out_dict,
774
+ eta=0.0
775
+ ):
776
+ x = noise
777
+ b = x.shape[0]
778
+ device = x.device
779
+ for t in reversed(range(T)):
780
+ print(f'Sample timestep {t:4d}', end='\r')
781
+ t_array = (torch.ones(b, device=device) * t).long()
782
+ out_num = self._denoise_fn(x, t_array, **out_dict)
783
+ x = self.gaussian_ddim_step(
784
+ out_num,
785
+ x,
786
+ t_array
787
+ )
788
+ print()
789
+ return x
790
+
791
+
792
+ @torch.no_grad()
793
+ def gaussian_ddim_reverse_step(
794
+ self,
795
+ model_out_num,
796
+ x,
797
+ t,
798
+ clip_denoised=False,
799
+ eta=0.0
800
+ ):
801
+ assert eta == 0.0, "Eta must be zero."
802
+ out = self.gaussian_p_mean_variance(
803
+ model_out_num,
804
+ x,
805
+ t,
806
+ clip_denoised=clip_denoised,
807
+ denoised_fn=None,
808
+ model_kwargs=None,
809
+ )
810
+
811
+ eps = (
812
+ extract(self.sqrt_recip_alphas_cumprod, t, x.shape) * x
813
+ - out["pred_xstart"]
814
+ ) / extract(self.sqrt_recipm1_alphas_cumprod, t, x.shape)
815
+ alpha_bar_next = extract(self.alphas_cumprod_next, t, x.shape)
816
+
817
+ mean_pred = (
818
+ out["pred_xstart"] * torch.sqrt(alpha_bar_next)
819
+ + torch.sqrt(1 - alpha_bar_next) * eps
820
+ )
821
+
822
+ return mean_pred
823
+
824
+ @torch.no_grad()
825
+ def gaussian_ddim_reverse_sample(
826
+ self,
827
+ x,
828
+ T,
829
+ out_dict,
830
+ ):
831
+ b = x.shape[0]
832
+ device = x.device
833
+ for t in range(T):
834
+ print(f'Reverse timestep {t:4d}', end='\r')
835
+ t_array = (torch.ones(b, device=device) * t).long()
836
+ out_num = self._denoise_fn(x, t_array, **out_dict)
837
+ x = self.gaussian_ddim_reverse_step(
838
+ out_num,
839
+ x,
840
+ t_array,
841
+ eta=0.0
842
+ )
843
+ print()
844
+
845
+ return x
846
+
847
+
848
+ @torch.no_grad()
849
+ def multinomial_ddim_step(
850
+ self,
851
+ model_out_cat,
852
+ log_x_t,
853
+ t,
854
+ out_dict,
855
+ eta=0.0
856
+ ):
857
+ # not ddim, essentially
858
+ log_x0 = self.predict_start(model_out_cat, log_x_t=log_x_t, t=t, out_dict=out_dict)
859
+
860
+ alpha_bar = extract(self.alphas_cumprod, t, log_x_t.shape)
861
+ alpha_bar_prev = extract(self.alphas_cumprod_prev, t, log_x_t.shape)
862
+ sigma = (
863
+ eta
864
+ * torch.sqrt((1 - alpha_bar_prev) / (1 - alpha_bar))
865
+ * torch.sqrt(1 - alpha_bar / alpha_bar_prev)
866
+ )
867
+
868
+ coef1 = sigma
869
+ coef2 = alpha_bar_prev - sigma * alpha_bar
870
+ coef3 = 1 - coef1 - coef2
871
+
872
+
873
+ log_ps = torch.stack([
874
+ torch.log(coef1) + log_x_t,
875
+ torch.log(coef2) + log_x0,
876
+ torch.log(coef3) - torch.log(self.num_classes_expanded)
877
+ ], dim=2)
878
+
879
+ log_prob = torch.logsumexp(log_ps, dim=2)
880
+
881
+ out = self.log_sample_categorical(log_prob)
882
+
883
+ return out
884
+
885
+ @torch.no_grad()
886
+ def sample_ddim(self, num_samples, y_dist):
887
+ b = num_samples
888
+ device = self.log_alpha.device
889
+ z_norm = torch.randn((b, self.num_numerical_features), device=device)
890
+
891
+ has_cat = self.num_classes[0] != 0
892
+ log_z = torch.zeros((b, 0), device=device).float()
893
+ if has_cat:
894
+ uniform_logits = torch.zeros((b, len(self.num_classes_expanded)), device=device)
895
+ log_z = self.log_sample_categorical(uniform_logits)
896
+
897
+ y = torch.multinomial(
898
+ y_dist,
899
+ num_samples=b,
900
+ replacement=True
901
+ )
902
+ out_dict = {'y': y.long().to(device)}
903
+ for i in reversed(range(0, self.num_timesteps)):
904
+ print(f'Sample timestep {i:4d}', end='\r')
905
+ t = torch.full((b,), i, device=device, dtype=torch.long)
906
+ model_out = self._denoise_fn(
907
+ torch.cat([z_norm, log_z], dim=1).float(),
908
+ t,
909
+ **out_dict
910
+ )
911
+ model_out_num = model_out[:, :self.num_numerical_features]
912
+ model_out_cat = model_out[:, self.num_numerical_features:]
913
+ z_norm = self.gaussian_ddim_step(model_out_num, z_norm, t, clip_denoised=False)
914
+ if has_cat:
915
+ log_z = self.multinomial_ddim_step(model_out_cat, log_z, t, out_dict)
916
+
917
+ print()
918
+ z_ohe = torch.exp(log_z).round()
919
+ z_cat = log_z
920
+ if has_cat:
921
+ z_cat = ohe_to_categories(z_ohe, self.num_classes)
922
+ sample = torch.cat([z_norm, z_cat], dim=1).cpu()
923
+ return sample, out_dict
924
+
925
+
926
+ @torch.no_grad()
927
+ def sample(self, num_samples, y_dist):
928
+ b = num_samples
929
+ device = self.log_alpha.device
930
+ z_norm = torch.randn((b, self.num_numerical_features), device=device)
931
+
932
+ has_cat = self.num_classes[0] != 0
933
+ log_z = torch.zeros((b, 0), device=device).float()
934
+ if has_cat:
935
+ uniform_logits = torch.zeros((b, len(self.num_classes_expanded)), device=device)
936
+ log_z = self.log_sample_categorical(uniform_logits)
937
+
938
+ y = torch.multinomial(
939
+ y_dist,
940
+ num_samples=b,
941
+ replacement=True
942
+ )
943
+ out_dict = {'y': y.long().to(device)}
944
+ for i in reversed(range(0, self.num_timesteps)):
945
+ print(f'Sample timestep {i:4d}', end='\r')
946
+ t = torch.full((b,), i, device=device, dtype=torch.long)
947
+ model_out = self._denoise_fn(
948
+ torch.cat([z_norm, log_z], dim=1).float(),
949
+ t,
950
+ **out_dict
951
+ )
952
+ model_out_num = model_out[:, :self.num_numerical_features]
953
+ model_out_cat = model_out[:, self.num_numerical_features:]
954
+ z_norm = self.gaussian_p_sample(model_out_num, z_norm, t, clip_denoised=False)['sample']
955
+ if has_cat:
956
+ log_z = self.p_sample(model_out_cat, log_z, t, out_dict)
957
+
958
+ print()
959
+ z_ohe = torch.exp(log_z).round()
960
+ z_cat = log_z
961
+ if has_cat:
962
+ z_cat = ohe_to_categories(z_ohe, self.num_classes)
963
+ sample = torch.cat([z_norm, z_cat], dim=1).cpu()
964
+ return sample, out_dict
965
+
966
+ def sample_all(self, num_samples, batch_size, y_dist, ddim=False):
967
+ if ddim:
968
+ print('Sample using DDIM.')
969
+ sample_fn = self.sample_ddim
970
+ else:
971
+ sample_fn = self.sample
972
+
973
+ b = batch_size
974
+
975
+ all_y = []
976
+ all_samples = []
977
+ num_generated = 0
978
+ while num_generated < num_samples:
979
+ sample, out_dict = sample_fn(b, y_dist)
980
+ mask_nan = torch.any(sample.isnan(), dim=1)
981
+ sample = sample[~mask_nan]
982
+ out_dict['y'] = out_dict['y'][~mask_nan]
983
+
984
+ all_samples.append(sample)
985
+ all_y.append(out_dict['y'].cpu())
986
+ if sample.shape[0] != b:
987
+ raise FoundNANsError
988
+ num_generated += sample.shape[0]
989
+
990
+ x_gen = torch.cat(all_samples, dim=0)[:num_samples]
991
+ y_gen = torch.cat(all_y, dim=0)[:num_samples]
992
+
993
+ return x_gen, y_gen
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/modules.py ADDED
@@ -0,0 +1,486 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ """
2
+ Code was adapted from https://github.com/Yura52/rtdl
3
+ """
4
+
5
+ import math
6
+ from typing import Any, Callable, Dict, List, Optional, Tuple, Type, Union, cast
7
+
8
+ import torch
9
+ import torch.nn as nn
10
+ import torch.nn.functional as F
11
+ import torch.optim
12
+ from torch import Tensor
13
+
14
+ ModuleType = Union[str, Callable[..., nn.Module]]
15
+
16
+ class SiLU(nn.Module):
17
+ def forward(self, x):
18
+ return x * torch.sigmoid(x)
19
+
20
+ def timestep_embedding(timesteps, dim, max_period=10000):
21
+ """
22
+ Create sinusoidal timestep embeddings.
23
+
24
+ :param timesteps: a 1-D Tensor of N indices, one per batch element.
25
+ These may be fractional.
26
+ :param dim: the dimension of the output.
27
+ :param max_period: controls the minimum frequency of the embeddings.
28
+ :return: an [N x dim] Tensor of positional embeddings.
29
+ """
30
+ half = dim // 2
31
+ freqs = torch.exp(
32
+ -math.log(max_period) * torch.arange(start=0, end=half, dtype=torch.float32) / half
33
+ ).to(device=timesteps.device)
34
+ args = timesteps[:, None].float() * freqs[None]
35
+ embedding = torch.cat([torch.cos(args), torch.sin(args)], dim=-1)
36
+ if dim % 2:
37
+ embedding = torch.cat([embedding, torch.zeros_like(embedding[:, :1])], dim=-1)
38
+ return embedding
39
+
40
+ def _is_glu_activation(activation: ModuleType):
41
+ return (
42
+ isinstance(activation, str)
43
+ and activation.endswith('GLU')
44
+ or activation in [ReGLU, GEGLU]
45
+ )
46
+
47
+
48
+ def _all_or_none(values):
49
+ assert all(x is None for x in values) or all(x is not None for x in values)
50
+
51
+ def reglu(x: Tensor) -> Tensor:
52
+ """The ReGLU activation function from [1].
53
+ References:
54
+ [1] Noam Shazeer, "GLU Variants Improve Transformer", 2020
55
+ """
56
+ assert x.shape[-1] % 2 == 0
57
+ a, b = x.chunk(2, dim=-1)
58
+ return a * F.relu(b)
59
+
60
+
61
+ def geglu(x: Tensor) -> Tensor:
62
+ """The GEGLU activation function from [1].
63
+ References:
64
+ [1] Noam Shazeer, "GLU Variants Improve Transformer", 2020
65
+ """
66
+ assert x.shape[-1] % 2 == 0
67
+ a, b = x.chunk(2, dim=-1)
68
+ return a * F.gelu(b)
69
+
70
+ class ReGLU(nn.Module):
71
+ """The ReGLU activation function from [shazeer2020glu].
72
+
73
+ Examples:
74
+ .. testcode::
75
+
76
+ module = ReGLU()
77
+ x = torch.randn(3, 4)
78
+ assert module(x).shape == (3, 2)
79
+
80
+ References:
81
+ * [shazeer2020glu] Noam Shazeer, "GLU Variants Improve Transformer", 2020
82
+ """
83
+
84
+ def forward(self, x: Tensor) -> Tensor:
85
+ return reglu(x)
86
+
87
+
88
+ class GEGLU(nn.Module):
89
+ """The GEGLU activation function from [shazeer2020glu].
90
+
91
+ Examples:
92
+ .. testcode::
93
+
94
+ module = GEGLU()
95
+ x = torch.randn(3, 4)
96
+ assert module(x).shape == (3, 2)
97
+
98
+ References:
99
+ * [shazeer2020glu] Noam Shazeer, "GLU Variants Improve Transformer", 2020
100
+ """
101
+
102
+ def forward(self, x: Tensor) -> Tensor:
103
+ return geglu(x)
104
+
105
+ def _make_nn_module(module_type: ModuleType, *args) -> nn.Module:
106
+ return (
107
+ (
108
+ ReGLU()
109
+ if module_type == 'ReGLU'
110
+ else GEGLU()
111
+ if module_type == 'GEGLU'
112
+ else getattr(nn, module_type)(*args)
113
+ )
114
+ if isinstance(module_type, str)
115
+ else module_type(*args)
116
+ )
117
+
118
+
119
+ class MLP(nn.Module):
120
+ """The MLP model used in [gorishniy2021revisiting].
121
+
122
+ The following scheme describes the architecture:
123
+
124
+ .. code-block:: text
125
+
126
+ MLP: (in) -> Block -> ... -> Block -> Linear -> (out)
127
+ Block: (in) -> Linear -> Activation -> Dropout -> (out)
128
+
129
+ Examples:
130
+ .. testcode::
131
+
132
+ x = torch.randn(4, 2)
133
+ module = MLP.make_baseline(x.shape[1], [3, 5], 0.1, 1)
134
+ assert module(x).shape == (len(x), 1)
135
+
136
+ References:
137
+ * [gorishniy2021revisiting] Yury Gorishniy, Ivan Rubachev, Valentin Khrulkov, Artem Babenko, "Revisiting Deep Learning Models for Tabular Data", 2021
138
+ """
139
+
140
+ class Block(nn.Module):
141
+ """The main building block of `MLP`."""
142
+
143
+ def __init__(
144
+ self,
145
+ *,
146
+ d_in: int,
147
+ d_out: int,
148
+ bias: bool,
149
+ activation: ModuleType,
150
+ dropout: float,
151
+ ) -> None:
152
+ super().__init__()
153
+ self.linear = nn.Linear(d_in, d_out, bias)
154
+ self.activation = _make_nn_module(activation)
155
+ self.dropout = nn.Dropout(dropout)
156
+
157
+ def forward(self, x: Tensor) -> Tensor:
158
+ return self.dropout(self.activation(self.linear(x)))
159
+
160
+ def __init__(
161
+ self,
162
+ *,
163
+ d_in: int,
164
+ d_layers: List[int],
165
+ dropouts: Union[float, List[float]],
166
+ activation: Union[str, Callable[[], nn.Module]],
167
+ d_out: int,
168
+ ) -> None:
169
+ """
170
+ Note:
171
+ `make_baseline` is the recommended constructor.
172
+ """
173
+ super().__init__()
174
+ if isinstance(dropouts, float):
175
+ dropouts = [dropouts] * len(d_layers)
176
+ assert len(d_layers) == len(dropouts)
177
+ assert activation not in ['ReGLU', 'GEGLU']
178
+
179
+ self.blocks = nn.ModuleList(
180
+ [
181
+ MLP.Block(
182
+ d_in=d_layers[i - 1] if i else d_in,
183
+ d_out=d,
184
+ bias=True,
185
+ activation=activation,
186
+ dropout=dropout,
187
+ )
188
+ for i, (d, dropout) in enumerate(zip(d_layers, dropouts))
189
+ ]
190
+ )
191
+ self.head = nn.Linear(d_layers[-1] if d_layers else d_in, d_out)
192
+
193
+ @classmethod
194
+ def make_baseline(
195
+ cls: Type['MLP'],
196
+ d_in: int,
197
+ d_layers: List[int],
198
+ dropout: float,
199
+ d_out: int,
200
+ ) -> 'MLP':
201
+ """Create a "baseline" `MLP`.
202
+
203
+ This variation of MLP was used in [gorishniy2021revisiting]. Features:
204
+
205
+ * :code:`Activation` = :code:`ReLU`
206
+ * all linear layers except for the first one and the last one are of the same dimension
207
+ * the dropout rate is the same for all dropout layers
208
+
209
+ Args:
210
+ d_in: the input size
211
+ d_layers: the dimensions of the linear layers. If there are more than two
212
+ layers, then all of them except for the first and the last ones must
213
+ have the same dimension. Valid examples: :code:`[]`, :code:`[8]`,
214
+ :code:`[8, 16]`, :code:`[2, 2, 2, 2]`, :code:`[1, 2, 2, 4]`. Invalid
215
+ example: :code:`[1, 2, 3, 4]`.
216
+ dropout: the dropout rate for all hidden layers
217
+ d_out: the output size
218
+ Returns:
219
+ MLP
220
+
221
+ References:
222
+ * [gorishniy2021revisiting] Yury Gorishniy, Ivan Rubachev, Valentin Khrulkov, Artem Babenko, "Revisiting Deep Learning Models for Tabular Data", 2021
223
+ """
224
+ assert isinstance(dropout, float)
225
+ if len(d_layers) > 2:
226
+ assert len(set(d_layers[1:-1])) == 1, (
227
+ 'if d_layers contains more than two elements, then'
228
+ ' all elements except for the first and the last ones must be equal.'
229
+ )
230
+ return MLP(
231
+ d_in=d_in,
232
+ d_layers=d_layers, # type: ignore
233
+ dropouts=dropout,
234
+ activation='ReLU',
235
+ d_out=d_out,
236
+ )
237
+
238
+ def forward(self, x: Tensor) -> Tensor:
239
+ x = x.float()
240
+ for block in self.blocks:
241
+ x = block(x)
242
+ x = self.head(x)
243
+ return x
244
+
245
+
246
+ class ResNet(nn.Module):
247
+ """The ResNet model used in [gorishniy2021revisiting].
248
+ The following scheme describes the architecture:
249
+ .. code-block:: text
250
+ ResNet: (in) -> Linear -> Block -> ... -> Block -> Head -> (out)
251
+ |-> Norm -> Linear -> Activation -> Dropout -> Linear -> Dropout ->|
252
+ | |
253
+ Block: (in) ------------------------------------------------------------> Add -> (out)
254
+ Head: (in) -> Norm -> Activation -> Linear -> (out)
255
+ Examples:
256
+ .. testcode::
257
+ x = torch.randn(4, 2)
258
+ module = ResNet.make_baseline(
259
+ d_in=x.shape[1],
260
+ n_blocks=2,
261
+ d_main=3,
262
+ d_hidden=4,
263
+ dropout_first=0.25,
264
+ dropout_second=0.0,
265
+ d_out=1
266
+ )
267
+ assert module(x).shape == (len(x), 1)
268
+ References:
269
+ * [gorishniy2021revisiting] Yury Gorishniy, Ivan Rubachev, Valentin Khrulkov, Artem Babenko, "Revisiting Deep Learning Models for Tabular Data", 2021
270
+ """
271
+
272
+ class Block(nn.Module):
273
+ """The main building block of `ResNet`."""
274
+
275
+ def __init__(
276
+ self,
277
+ *,
278
+ d_main: int,
279
+ d_hidden: int,
280
+ bias_first: bool,
281
+ bias_second: bool,
282
+ dropout_first: float,
283
+ dropout_second: float,
284
+ normalization: ModuleType,
285
+ activation: ModuleType,
286
+ skip_connection: bool,
287
+ ) -> None:
288
+ super().__init__()
289
+ self.normalization = _make_nn_module(normalization, d_main)
290
+ self.linear_first = nn.Linear(d_main, d_hidden, bias_first)
291
+ self.activation = _make_nn_module(activation)
292
+ self.dropout_first = nn.Dropout(dropout_first)
293
+ self.linear_second = nn.Linear(d_hidden, d_main, bias_second)
294
+ self.dropout_second = nn.Dropout(dropout_second)
295
+ self.skip_connection = skip_connection
296
+
297
+ def forward(self, x: Tensor) -> Tensor:
298
+ x_input = x
299
+ x = self.normalization(x)
300
+ x = self.linear_first(x)
301
+ x = self.activation(x)
302
+ x = self.dropout_first(x)
303
+ x = self.linear_second(x)
304
+ x = self.dropout_second(x)
305
+ if self.skip_connection:
306
+ x = x_input + x
307
+ return x
308
+
309
+ class Head(nn.Module):
310
+ """The final module of `ResNet`."""
311
+
312
+ def __init__(
313
+ self,
314
+ *,
315
+ d_in: int,
316
+ d_out: int,
317
+ bias: bool,
318
+ normalization: ModuleType,
319
+ activation: ModuleType,
320
+ ) -> None:
321
+ super().__init__()
322
+ self.normalization = _make_nn_module(normalization, d_in)
323
+ self.activation = _make_nn_module(activation)
324
+ self.linear = nn.Linear(d_in, d_out, bias)
325
+
326
+ def forward(self, x: Tensor) -> Tensor:
327
+ if self.normalization is not None:
328
+ x = self.normalization(x)
329
+ x = self.activation(x)
330
+ x = self.linear(x)
331
+ return x
332
+
333
+ def __init__(
334
+ self,
335
+ *,
336
+ d_in: int,
337
+ n_blocks: int,
338
+ d_main: int,
339
+ d_hidden: int,
340
+ dropout_first: float,
341
+ dropout_second: float,
342
+ normalization: ModuleType,
343
+ activation: ModuleType,
344
+ d_out: int,
345
+ ) -> None:
346
+ """
347
+ Note:
348
+ `make_baseline` is the recommended constructor.
349
+ """
350
+ super().__init__()
351
+
352
+ self.first_layer = nn.Linear(d_in, d_main)
353
+ if d_main is None:
354
+ d_main = d_in
355
+ self.blocks = nn.Sequential(
356
+ *[
357
+ ResNet.Block(
358
+ d_main=d_main,
359
+ d_hidden=d_hidden,
360
+ bias_first=True,
361
+ bias_second=True,
362
+ dropout_first=dropout_first,
363
+ dropout_second=dropout_second,
364
+ normalization=normalization,
365
+ activation=activation,
366
+ skip_connection=True,
367
+ )
368
+ for _ in range(n_blocks)
369
+ ]
370
+ )
371
+ self.head = ResNet.Head(
372
+ d_in=d_main,
373
+ d_out=d_out,
374
+ bias=True,
375
+ normalization=normalization,
376
+ activation=activation,
377
+ )
378
+
379
+ @classmethod
380
+ def make_baseline(
381
+ cls: Type['ResNet'],
382
+ *,
383
+ d_in: int,
384
+ n_blocks: int,
385
+ d_main: int,
386
+ d_hidden: int,
387
+ dropout_first: float,
388
+ dropout_second: float,
389
+ d_out: int,
390
+ ) -> 'ResNet':
391
+ """Create a "baseline" `ResNet`.
392
+ This variation of ResNet was used in [gorishniy2021revisiting]. Features:
393
+ * :code:`Activation` = :code:`ReLU`
394
+ * :code:`Norm` = :code:`BatchNorm1d`
395
+ Args:
396
+ d_in: the input size
397
+ n_blocks: the number of Blocks
398
+ d_main: the input size (or, equivalently, the output size) of each Block
399
+ d_hidden: the output size of the first linear layer in each Block
400
+ dropout_first: the dropout rate of the first dropout layer in each Block.
401
+ dropout_second: the dropout rate of the second dropout layer in each Block.
402
+ References:
403
+ * [gorishniy2021revisiting] Yury Gorishniy, Ivan Rubachev, Valentin Khrulkov, Artem Babenko, "Revisiting Deep Learning Models for Tabular Data", 2021
404
+ """
405
+ return cls(
406
+ d_in=d_in,
407
+ n_blocks=n_blocks,
408
+ d_main=d_main,
409
+ d_hidden=d_hidden,
410
+ dropout_first=dropout_first,
411
+ dropout_second=dropout_second,
412
+ normalization='BatchNorm1d',
413
+ activation='ReLU',
414
+ d_out=d_out,
415
+ )
416
+
417
+ def forward(self, x: Tensor) -> Tensor:
418
+ x = x.float()
419
+ x = self.first_layer(x)
420
+ x = self.blocks(x)
421
+ x = self.head(x)
422
+ return x
423
+ #### For diffusion
424
+
425
+ class MLPDiffusion(nn.Module):
426
+ def __init__(self, d_in, num_classes, is_y_cond, rtdl_params, dim_t = 128):
427
+ super().__init__()
428
+ self.dim_t = dim_t
429
+ self.num_classes = num_classes
430
+ self.is_y_cond = is_y_cond
431
+
432
+ # d0 = rtdl_params['d_layers'][0]
433
+
434
+ rtdl_params['d_in'] = dim_t
435
+ rtdl_params['d_out'] = d_in
436
+
437
+ self.mlp = MLP.make_baseline(**rtdl_params)
438
+
439
+ if self.num_classes > 0 and is_y_cond:
440
+ self.label_emb = nn.Embedding(self.num_classes, dim_t)
441
+ elif self.num_classes == 0 and is_y_cond:
442
+ self.label_emb = nn.Linear(1, dim_t)
443
+
444
+ self.proj = nn.Linear(d_in, dim_t)
445
+ self.time_embed = nn.Sequential(
446
+ nn.Linear(dim_t, dim_t),
447
+ nn.SiLU(),
448
+ nn.Linear(dim_t, dim_t)
449
+ )
450
+
451
+ def forward(self, x, timesteps, y=None):
452
+ emb = self.time_embed(timestep_embedding(timesteps, self.dim_t))
453
+ if self.is_y_cond and y is not None:
454
+ if self.num_classes > 0:
455
+ y = y.squeeze()
456
+ else:
457
+ y = y.resize(y.size(0), 1).float()
458
+ emb += F.silu(self.label_emb(y))
459
+ x = self.proj(x) + emb
460
+ return self.mlp(x)
461
+
462
+ class ResNetDiffusion(nn.Module):
463
+ def __init__(self, d_in, num_classes, rtdl_params, dim_t = 256):
464
+ super().__init__()
465
+ self.dim_t = dim_t
466
+ self.num_classes = num_classes
467
+
468
+ rtdl_params['d_in'] = d_in
469
+ rtdl_params['d_out'] = d_in
470
+ rtdl_params['emb_d'] = dim_t
471
+ self.resnet = ResNet.make_baseline(**rtdl_params)
472
+
473
+ if self.num_classes > 0:
474
+ self.label_emb = nn.Embedding(self.num_classes, dim_t)
475
+
476
+ self.time_embed = nn.Sequential(
477
+ nn.Linear(dim_t, dim_t),
478
+ nn.SiLU(),
479
+ nn.Linear(dim_t, dim_t)
480
+ )
481
+
482
+ def forward(self, x, timesteps, y=None):
483
+ emb = self.time_embed(timestep_embedding(timesteps, self.dim_t))
484
+ if y is not None and self.num_classes > 0:
485
+ emb += self.label_emb(y.squeeze())
486
+ return self.resnet(x, emb)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tab_ddpm/utils.py ADDED
@@ -0,0 +1,174 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import torch
2
+ import numpy as np
3
+ import torch.nn.functional as F
4
+ from torch.profiler import record_function
5
+ from inspect import isfunction
6
+
7
+ def normal_kl(mean1, logvar1, mean2, logvar2):
8
+ """
9
+ Compute the KL divergence between two gaussians.
10
+
11
+ Shapes are automatically broadcasted, so batches can be compared to
12
+ scalars, among other use cases.
13
+ """
14
+ tensor = None
15
+ for obj in (mean1, logvar1, mean2, logvar2):
16
+ if isinstance(obj, torch.Tensor):
17
+ tensor = obj
18
+ break
19
+ assert tensor is not None, "at least one argument must be a Tensor"
20
+
21
+ # Force variances to be Tensors. Broadcasting helps convert scalars to
22
+ # Tensors, but it does not work for torch.exp().
23
+ logvar1, logvar2 = [
24
+ x if isinstance(x, torch.Tensor) else torch.tensor(x).to(tensor)
25
+ for x in (logvar1, logvar2)
26
+ ]
27
+
28
+ return 0.5 * (
29
+ -1.0
30
+ + logvar2
31
+ - logvar1
32
+ + torch.exp(logvar1 - logvar2)
33
+ + ((mean1 - mean2) ** 2) * torch.exp(-logvar2)
34
+ )
35
+
36
+ def approx_standard_normal_cdf(x):
37
+ """
38
+ A fast approximation of the cumulative distribution function of the
39
+ standard normal.
40
+ """
41
+ return 0.5 * (1.0 + torch.tanh(np.sqrt(2.0 / np.pi) * (x + 0.044715 * torch.pow(x, 3))))
42
+
43
+
44
+ def discretized_gaussian_log_likelihood(x, *, means, log_scales):
45
+ """
46
+ Compute the log-likelihood of a Gaussian distribution discretizing to a
47
+ given image.
48
+
49
+ :param x: the target images. It is assumed that this was uint8 values,
50
+ rescaled to the range [-1, 1].
51
+ :param means: the Gaussian mean Tensor.
52
+ :param log_scales: the Gaussian log stddev Tensor.
53
+ :return: a tensor like x of log probabilities (in nats).
54
+ """
55
+ assert x.shape == means.shape == log_scales.shape
56
+ centered_x = x - means
57
+ inv_stdv = torch.exp(-log_scales)
58
+ plus_in = inv_stdv * (centered_x + 1.0 / 255.0)
59
+ cdf_plus = approx_standard_normal_cdf(plus_in)
60
+ min_in = inv_stdv * (centered_x - 1.0 / 255.0)
61
+ cdf_min = approx_standard_normal_cdf(min_in)
62
+ log_cdf_plus = torch.log(cdf_plus.clamp(min=1e-12))
63
+ log_one_minus_cdf_min = torch.log((1.0 - cdf_min).clamp(min=1e-12))
64
+ cdf_delta = cdf_plus - cdf_min
65
+ log_probs = torch.where(
66
+ x < -0.999,
67
+ log_cdf_plus,
68
+ torch.where(x > 0.999, log_one_minus_cdf_min, torch.log(cdf_delta.clamp(min=1e-12))),
69
+ )
70
+ assert log_probs.shape == x.shape
71
+ return log_probs
72
+
73
+ def sum_except_batch(x, num_dims=1):
74
+ '''
75
+ Sums all dimensions except the first.
76
+
77
+ Args:
78
+ x: Tensor, shape (batch_size, ...)
79
+ num_dims: int, number of batch dims (default=1)
80
+
81
+ Returns:
82
+ x_sum: Tensor, shape (batch_size,)
83
+ '''
84
+ return x.reshape(*x.shape[:num_dims], -1).sum(-1)
85
+
86
+ def mean_flat(tensor):
87
+ """
88
+ Take the mean over all non-batch dimensions.
89
+ """
90
+ return tensor.mean(dim=list(range(1, len(tensor.shape))))
91
+
92
+ def ohe_to_categories(ohe, K):
93
+ K = torch.from_numpy(K)
94
+ indices = torch.cat([torch.zeros((1,)), K.cumsum(dim=0)], dim=0).int().tolist()
95
+ res = []
96
+ for i in range(len(indices) - 1):
97
+ res.append(ohe[:, indices[i]:indices[i+1]].argmax(dim=1))
98
+ return torch.stack(res, dim=1)
99
+
100
+ def log_1_min_a(a):
101
+ return torch.log(1 - a.exp() + 1e-40)
102
+
103
+
104
+ def log_add_exp(a, b):
105
+ maximum = torch.max(a, b)
106
+ return maximum + torch.log(torch.exp(a - maximum) + torch.exp(b - maximum))
107
+
108
+ def exists(x):
109
+ return x is not None
110
+
111
+ def extract(a, t, x_shape):
112
+ b, *_ = t.shape
113
+ t = t.to(a.device)
114
+ out = a.gather(-1, t)
115
+ while len(out.shape) < len(x_shape):
116
+ out = out[..., None]
117
+ return out.expand(x_shape)
118
+
119
+ def default(val, d):
120
+ if exists(val):
121
+ return val
122
+ return d() if isfunction(d) else d
123
+
124
+ def log_categorical(log_x_start, log_prob):
125
+ return (log_x_start.exp() * log_prob).sum(dim=1)
126
+
127
+ def index_to_log_onehot(x, num_classes):
128
+ onehots = []
129
+ for i in range(len(num_classes)):
130
+ onehots.append(F.one_hot(x[:, i], num_classes[i]))
131
+
132
+ x_onehot = torch.cat(onehots, dim=1)
133
+ log_onehot = torch.log(x_onehot.float().clamp(min=1e-30))
134
+ return log_onehot
135
+
136
+ def log_sum_exp_by_classes(x, slices):
137
+ device = x.device
138
+ res = torch.zeros_like(x)
139
+ for ixs in slices:
140
+ res[:, ixs] = torch.logsumexp(x[:, ixs], dim=1, keepdim=True)
141
+
142
+ assert x.size() == res.size()
143
+
144
+ return res
145
+
146
+ @torch.jit.script
147
+ def log_sub_exp(a: torch.Tensor, b: torch.Tensor) -> torch.Tensor:
148
+ m = torch.maximum(a, b)
149
+ return torch.log(torch.exp(a - m) - torch.exp(b - m)) + m
150
+
151
+ @torch.jit.script
152
+ def sliced_logsumexp(x, slices):
153
+ lse = torch.logcumsumexp(
154
+ torch.nn.functional.pad(x, [1, 0, 0, 0], value=-float('inf')),
155
+ dim=-1)
156
+
157
+ slice_starts = slices[:-1]
158
+ slice_ends = slices[1:]
159
+
160
+ slice_lse = log_sub_exp(lse[:, slice_ends], lse[:, slice_starts])
161
+ slice_lse_repeated = torch.repeat_interleave(
162
+ slice_lse,
163
+ slice_ends - slice_starts,
164
+ dim=-1
165
+ )
166
+ return slice_lse_repeated
167
+
168
+ def log_onehot_to_index(log_x):
169
+ return log_x.argmax(1)
170
+
171
+ class FoundNANsError(BaseException):
172
+ """Found NANs during sampling"""
173
+ def __init__(self, message='Found NANs during sampling.'):
174
+ super(FoundNANsError, self).__init__(message)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tools/convert_synth_to_csv.py ADDED
@@ -0,0 +1,89 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ #!/usr/bin/env python3
2
+ """
3
+ Convert generated synthetic data from npy files to CSV format.
4
+ """
5
+ import os
6
+ import sys
7
+ import numpy as np
8
+ import pandas as pd
9
+ import argparse
10
+
11
+ def convert_to_csv(parent_dir, output_path=None):
12
+ """
13
+ Convert generated synthetic data to CSV.
14
+
15
+ Args:
16
+ parent_dir: Directory containing X_num_train.npy, X_cat_train.npy, y_train.npy
17
+ output_path: Output CSV file path (default: parent_dir/synth_train.csv)
18
+ """
19
+ parent_dir = os.path.abspath(parent_dir)
20
+
21
+ # Load npy files
22
+ x_num_path = os.path.join(parent_dir, 'X_num_train.npy')
23
+ x_cat_path = os.path.join(parent_dir, 'X_cat_train.npy')
24
+ y_path = os.path.join(parent_dir, 'y_train.npy')
25
+
26
+ data_parts = []
27
+ column_names = []
28
+
29
+ # Load numerical features
30
+ if os.path.exists(x_num_path):
31
+ X_num = np.load(x_num_path, allow_pickle=True)
32
+ print(f"Loaded X_num: shape {X_num.shape}")
33
+ data_parts.append(X_num)
34
+ # Create column names for numerical features
35
+ for i in range(X_num.shape[1]):
36
+ column_names.append(f'num_{i}')
37
+
38
+ # Load categorical features
39
+ if os.path.exists(x_cat_path):
40
+ X_cat = np.load(x_cat_path, allow_pickle=True)
41
+ print(f"Loaded X_cat: shape {X_cat.shape}")
42
+ data_parts.append(X_cat)
43
+ # Create column names for categorical features
44
+ for i in range(X_cat.shape[1]):
45
+ column_names.append(f'cat_{i}')
46
+
47
+ # Load target
48
+ if os.path.exists(y_path):
49
+ y = np.load(y_path, allow_pickle=True)
50
+ print(f"Loaded y: shape {y.shape}")
51
+ # Reshape if needed
52
+ if y.ndim == 1:
53
+ y = y.reshape(-1, 1)
54
+ data_parts.append(y)
55
+ column_names.append('y')
56
+
57
+ if not data_parts:
58
+ raise ValueError(f"No data files found in {parent_dir}")
59
+
60
+ # Concatenate all parts
61
+ data = np.hstack(data_parts)
62
+ print(f"Combined data shape: {data.shape}")
63
+ print(f"Number of columns: {len(column_names)}")
64
+
65
+ # Create DataFrame
66
+ df = pd.DataFrame(data, columns=column_names)
67
+
68
+ # Determine output path
69
+ if output_path is None:
70
+ output_path = os.path.join(parent_dir, 'synth_train.csv')
71
+
72
+ # Save to CSV
73
+ df.to_csv(output_path, index=False)
74
+ print(f"[OK] Saved synthetic data to: {output_path}")
75
+ print(f"[OK] Total samples: {len(df)}, Total columns: {len(df.columns)}")
76
+
77
+ # Print summary statistics
78
+ print("\n=== Data Summary ===")
79
+ print(df.describe())
80
+
81
+ return output_path
82
+
83
+ if __name__ == '__main__':
84
+ parser = argparse.ArgumentParser(description='Convert synthetic npy files to CSV')
85
+ parser.add_argument('parent_dir', type=str, help='Directory containing generated npy files')
86
+ parser.add_argument('--output', '-o', type=str, default=None, help='Output CSV file path (default: parent_dir/synth_train.csv)')
87
+
88
+ args = parser.parse_args()
89
+ convert_to_csv(args.parent_dir, args.output)
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tools/make_tabddpm_info.py ADDED
@@ -0,0 +1,97 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os, json
2
+ import numpy as np
3
+
4
+ def load(path):
5
+ return np.load(path, allow_pickle=True)
6
+
7
+ def main(data_dir: str):
8
+ # required files
9
+ req = [
10
+ "X_num_train.npy","X_num_val.npy","X_num_test.npy",
11
+ "X_cat_train.npy","X_cat_val.npy","X_cat_test.npy",
12
+ "y_train.npy","y_val.npy","y_test.npy"
13
+ ]
14
+ for f in req:
15
+ p = os.path.join(data_dir, f)
16
+ if not os.path.exists(p):
17
+ raise FileNotFoundError(p)
18
+
19
+ Xn_tr = load(os.path.join(data_dir,"X_num_train.npy"))
20
+ Xc_tr = load(os.path.join(data_dir,"X_cat_train.npy"))
21
+ y_tr = load(os.path.join(data_dir,"y_train.npy"))
22
+
23
+ # basic dims
24
+ n_num = 0 if Xn_tr.ndim < 2 else int(Xn_tr.shape[1])
25
+ n_cat = 0 if Xc_tr.ndim < 2 else int(Xc_tr.shape[1])
26
+
27
+ # infer task / y info
28
+ y_flat = y_tr.reshape(-1)
29
+ uniq = np.unique(y_flat)
30
+ # if y is integer and has few unique values, could be classification
31
+ is_int = np.issubdtype(y_flat.dtype, np.integer)
32
+ num_classes = int(len(uniq)) if is_int else 0
33
+
34
+ # determine task_type
35
+ if is_int and num_classes == 2:
36
+ task_type = "binclass"
37
+ elif is_int and num_classes > 2 and num_classes <= 100:
38
+ task_type = "multiclass"
39
+ else:
40
+ task_type = "regression"
41
+
42
+ # cat sizes (per categorical column)
43
+ cat_sizes = []
44
+ if n_cat > 0:
45
+ # compute max+1 per column (assume categories encoded 0..K-1)
46
+ for j in range(n_cat):
47
+ col = Xc_tr[:, j].reshape(-1)
48
+ if col.size == 0:
49
+ cat_sizes.append(0)
50
+ else:
51
+ mx = int(np.max(col))
52
+ cat_sizes.append(mx + 1)
53
+
54
+ # numeric stats (optional but useful)
55
+ num_stats = {}
56
+ if n_num > 0:
57
+ # mean/std/min/max over train numeric
58
+ num_stats = {
59
+ "mean": np.mean(Xn_tr, axis=0).tolist(),
60
+ "std": (np.std(Xn_tr, axis=0) + 1e-12).tolist(),
61
+ "min": np.min(Xn_tr, axis=0).tolist(),
62
+ "max": np.max(Xn_tr, axis=0).tolist(),
63
+ }
64
+
65
+ # This repo expects info.json. Keep fields simple & robust.
66
+ info = {
67
+ "task_type": task_type,
68
+ "n_num_features": n_num,
69
+ "n_cat_features": n_cat,
70
+ "cat_sizes": cat_sizes,
71
+ "y_dtype": str(y_flat.dtype),
72
+ "y_unique_count": int(len(uniq)),
73
+ "y_unique_head": uniq[:20].tolist(),
74
+ # heuristics: user can override in config.toml
75
+ "is_classification_like": bool(is_int and len(uniq) <= 100),
76
+ "num_classes_like": num_classes,
77
+ }
78
+
79
+ # write files
80
+ with open(os.path.join(data_dir, "info.json"), "w", encoding="utf-8") as f:
81
+ json.dump(info, f, ensure_ascii=False, indent=2)
82
+
83
+ # some codepaths may look for these (harmless if unused)
84
+ with open(os.path.join(data_dir, "cat_sizes.json"), "w", encoding="utf-8") as f:
85
+ json.dump({"cat_sizes": cat_sizes}, f, ensure_ascii=False, indent=2)
86
+
87
+ with open(os.path.join(data_dir, "num_stats.json"), "w", encoding="utf-8") as f:
88
+ json.dump(num_stats, f, ensure_ascii=False, indent=2)
89
+
90
+ print("[OK] wrote:", os.path.join(data_dir,"info.json"))
91
+ print("[OK] n_num =", n_num, "n_cat =", n_cat, "cat_sizes =", cat_sizes)
92
+ print("[OK] y unique count =", len(uniq), "head =", uniq[:20])
93
+
94
+ if __name__ == "__main__":
95
+ data_dir = "data/Tab-Cate-1"
96
+ main(data_dir)
97
+
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/abalone_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:aad08aabbf726ab65389e42c3a524f407e6bc791edcb5af304c31ba9037f6c10
3
+ size 351
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/adult_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:956a488f34e502db9975d86ef25b75cf5c01c08a3e5a47c7ade4f72cbf11374c
3
+ size 432
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/buddy_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d4577f6d2af34360bff6faf7a01af5501463e8b13ff0fc0c18bf2bfa67c6c63b
3
+ size 393
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/california_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0508cdc40c02386321976c9537fbe54a5f2b0fa0e8e7dde72a6d4d289ced862c
3
+ size 335
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/cardio_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a411285e39c4cb685233ec73375cfd023fb834897dd6b5a8f99cf7a7ec1c6656
3
+ size 403
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/churn2_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e4dea09bdea9006ce44f71eef0e1740f639eceff44dd021c351ece84a428a00a
3
+ size 380
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/default_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fb7ad47bb5b1c9fbe54cf14cc854581b22ed72f9dbc47f0a022e48fa572b5ffc
3
+ size 372
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/diabetes_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0d1265117a3d8688b7878c62656b6d85bb543e723b1f5f01a2ed5bd4b12878dc
3
+ size 335
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/fb-comments_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:18ccbc230cd0959834d3155e67c29d259af90720d29bc4284b3209df5374886e
3
+ size 519
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/gesture_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:efa67605a7699adf3cd46bb7d7d5512516ab3e5da3e01451004aadf9ee4f9d62
3
+ size 333
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/higgs-small_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d4c67d2f9937dc5548b3c3a1ae71846e5fccc66853b8067670b979ff2a4f0201
3
+ size 334
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/house_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:852eea0c2f88f7032cebc5dc7c9422be385d231f1ce8b5c9364a534d64fdf4f3
3
+ size 332
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/insurance_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2201078a643eb78c649a3d4a9e897ecf39c2d7f35c5a9fdb055c91251694b808
3
+ size 369
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/king_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a94473811e28035ef4781122c3da6e4f81b232b68a0042b64c30a1df648e02d3
3
+ size 374
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/miniboone_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:14dcf192aa15f491f147b30e2312b55889a146c546d72d89ee2d07ff26cc2103
3
+ size 334
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/catboost/wilt_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4f6989397bf0029ee07b2ca9ab9335645ea3402bd6b782f2cec4cb40ad70b2ed
3
+ size 334
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/abalone_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f99f28009311b8bb5413fbdbf72af25d1d384eec3c079c156e6a6eafa93e46bb
3
+ size 157
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/adult_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1d4d4e1b062e420ce1838117b872e1794a632ea7f1dd8220eb640b71f793cd3a
3
+ size 229
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/buddy_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bfe610df17eb46233b0dbba7fb71ea6117e9992763ae8ccd789159c296f3cc43
3
+ size 165
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/california_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b9970d5c42859dce6fded5b3fb285bba98181076d8db75b8ef78e5e0167c7b0c
3
+ size 163
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/cardio_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bc9642d070f056675cd4d004c0b446576eb162e2819dec052325fe7da59ce85d
3
+ size 148
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/churn2_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ebea18b44a2d33a6643f283adf68961099d44d7e4f11e29148b501ddabb5894a
3
+ size 152
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/default_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2d6082a82af0fb59906d778c57e4229eeff861066c1e24bea9c5e721f804214c
3
+ size 201
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/diabetes_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:243a914fe90215cab4867d415cb82078366b5d2472264c91ea46d3e0e3291534
3
+ size 147
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/gesture_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a3a819ad5093581e1b94eeddb0655b99cccce3bb121f405b0b7e3b230c3c1a11
3
+ size 190
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/higgs-small_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3520fe130d4570aa07a79031b6016f31a4f36cd5fdc9ff7167f0c7e1768a6697
3
+ size 230
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/house_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:22f1903d9a59e6cc1df1a643b9bc216392fbb3549cb6555482898d4a7ac936aa
3
+ size 164
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/insurance_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:381e76611b072a0fb5fa41a7c640740453293a6d0cda8210697d4b9833d715e4
3
+ size 171
SynthData0523/main/c6/tabddpm/tabddpm-c6-20260510_222430/_tabddpm_runtime/tuned_models/mlp/king_cv.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:afbbb1a2be60833c9468ded47ba78228e5a00c42bed93681e4e2aa0c6b68278d
3
+ size 163