code stringlengths 51 2.34k | sequence stringlengths 1.16k 13.1k | docstring stringlengths 11 171 |
|---|---|---|
def list_names(cls):
ret = dict([(item['id'], item['name'])
for item in cls.list({'items_per_page': 500})])
return ret | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'list_names'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cls'};... | Retrieve paas id and names. |
def datetime_to_nanos(dt):
if isinstance(dt, pd.Timestamp):
return dt.value
elif isinstance(dt, str):
return pd.Timestamp(dt).value
elif isinstance(dt, long):
return dt
elif isinstance(dt, datetime):
return long(dt.strftime("%s%f")) * 1000
raise ValueError | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'datetime_to_nanos'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': ... | Accepts a string, Pandas Timestamp, or long, and returns nanos since the epoch. |
def list_cab (archive, compression, cmd, verbosity, interactive):
cmdlist = [cmd, '-l']
if verbosity > 0:
cmdlist.append('-v')
cmdlist.append(archive)
return cmdlist | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'list_cab'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8']}; {'id': '4', 'type': 'identifier', 'children': []... | List a CAB archive. |
def _create_subset_file(in_file, het_region_bed, work_dir, data):
cnv_regions = shared.get_base_cnv_regions(data, work_dir)
region_bed = bedutils.intersect_two(het_region_bed, cnv_regions, work_dir, data)
out_file = os.path.join(work_dir, "%s-origsubset.bcf" % utils.splitext_plus(os.path.basename(in_file))[... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_create_subset_file'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'childre... | Subset the VCF to a set of pre-calculated smaller regions. |
def UNTL_to_encodedUNTL(subject):
subject = normalize_UNTL(subject)
subject = subject.replace(' ', '_')
subject = subject.replace('_-_', '/')
return subject | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'UNTL_to_encodedUNTL'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Normalize a UNTL subject heading to be used in SOLR. |
def _infodict(cls, name):
info = cls._dataset_info.get(name, None)
if info is None:
raise ValueError('No such dataset {0} exists, '
'use list_datasets() to get a list '
'of available datasets.'.format(name))
return info | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_infodict'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cl... | load the info dictionary for the given name |
def _id_map(minion_id, dns_name):
bank = 'digicert/minions'
cache = salt.cache.Cache(__opts__, syspaths.CACHE_DIR)
dns_names = cache.fetch(bank, minion_id)
if not isinstance(dns_names, list):
dns_names = []
if dns_name not in dns_names:
dns_names.append(dns_name)
cache.store(bank... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_id_map'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'mini... | Maintain a relationship between a minion and a dns name |
def keyPressEvent(self, event):
if self._process.state() != self._process.Running:
return
tc = self.textCursor()
sel_start = tc.selectionStart()
sel_end = tc.selectionEnd()
tc.setPosition(self._formatter._last_cursor_pos)
self.setTextCursor(tc)
if self... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'keyPressEvent'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':... | Handle key press event using the defined input handler. |
def exclude_from_all(self, exclude_regex):
try:
re.compile(exclude_regex)
except re.error:
raise ZAPError('Invalid regex "{0}" provided'.format(exclude_regex))
self.logger.debug('Excluding {0} from proxy, spider and active scanner.'.format(exclude_regex))
self.zap... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'exclude_from_all'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'valu... | Exclude a pattern from proxy, spider and active scanner. |
def _get_binary_replacement(first, second, cls):
expr = ProtoExpr([first, second], {})
if LOG:
logger = logging.getLogger('QNET.create')
for key, rule in cls._binary_rules.items():
pat, replacement = rule
match_dict = match_pattern(pat, expr)
if match_dict:
try:
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_get_binary_replacement'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children... | Helper function for match_replace_binary |
def create_api_network_ipv6(self):
return ApiNetworkIPv6(
self.networkapi_url,
self.user,
self.password,
self.user_ldap) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'create_api_network_ipv6'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'va... | Get an instance of Api Networkv6 services facade. |
def _extract_hidden_data(dom):
input_tags = dom.find_all('input', attrs={'type': 'hidden'})
data = {}
for input_tag in input_tags:
data[input_tag['name']] = input_tag['value']
return data | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_extract_hidden_data'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value... | Extracts hidden input data from DOM and returns the data as dictionary. |
def extract_tar (archive, compression, cmd, verbosity, interactive, outdir):
try:
with tarfile.open(archive) as tfile:
tfile.extractall(path=outdir)
except Exception as err:
msg = "error extracting %s: %s" % (archive, err)
raise util.PatoolError(msg)
return None | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'extract_tar'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8', '9']}; {'id': '4', 'type': 'identifier', 'chil... | Extract a TAR archive with the tarfile Python module. |
def WriteFile(self, printer):
self.Validate()
extended_descriptor.WritePythonFile(
self.__file_descriptor, self.__package, self.__client_info.version,
printer) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'WriteFile'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'se... | Write the messages file to out. |
def doc_to_html(doc, doc_format="ROBOT"):
from robot.libdocpkg.htmlwriter import DocToHtml
return DocToHtml(doc_format)(doc) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'doc_to_html'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': '... | Convert documentation to HTML |
def finger(self, match, hash_type=None):
if hash_type is None:
hash_type = __opts__['hash_type']
matches = self.name_match(match, True)
ret = {}
for status, keys in six.iteritems(matches):
ret[status] = {}
for key in keys:
if status == ... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'finger'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': '... | Return the fingerprint for a specified key |
def _destroy(self):
self.unuse_region()
if self._rlist is not None:
try:
if len(self._rlist) == 0:
self._manager._fdict.pop(self._rlist.path_or_fd())
except (TypeError, KeyError):
pass | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_destroy'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; ... | Destruction code to decrement counters |
def install_from_zip(pkgpath, install_path, register_func, delete_after_install=False):
logger.debug("%s is a file, attempting to load zip", pkgpath)
pkgtempdir = tempfile.mkdtemp(prefix="honeycomb_")
try:
with zipfile.ZipFile(pkgpath) as pkgzip:
pkgzip.extractall(pkgtempdir)
except ... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'install_from_zip'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children'... | Install plugin from zipfile. |
def ParseMultiple(self, result_dicts):
for result_dict in result_dicts:
kb_user = rdf_client.User()
for wmi_key, kb_key in iteritems(self.account_mapping):
try:
kb_user.Set(kb_key, result_dict[wmi_key])
except KeyError:
pass
if kb_user.sid or kb_user.username:
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ParseMultiple'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':... | Parse the WMI Win32_UserAccount output. |
def posted(self):
for who, record in self.logs:
if record["field_name"] == "status" and record["added"] == "POST":
return True
return False | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'posted'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'... | True if bug was moved to POST in given time frame |
def _view_removed(self):
print("\nPackages with name matching [ {0}{1}{2} ]\n".format(
self.meta.color["CYAN"], ", ".join(self.binary),
self.meta.color["ENDC"]))
removed, packages = self._get_removed()
if packages and "--checklist" in self.extra:
removed = []
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_view_removed'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel... | View packages before removed |
def upload(name):
storage = fs.by_name(name)
return jsonify(success=True, **handle_upload(storage)) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'upload'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'name'}; {'... | Handle upload on POST if authorized. |
def scan_index(content_dir):
def scan_directory(root, files):
try:
for file in files:
fullpath = os.path.join(root, file)
relpath = os.path.relpath(fullpath, content_dir)
fingerprint = utils.file_fingerprint(fullpath)
last_fingerpri... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'scan_index'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'conten... | Scan all files in a content directory |
def prompt_for_new_password():
while True:
passw = getpass.getpass()
passw2 = getpass.getpass()
if passw == passw2: return passw
print 'Passwords do not match' | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '4']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'prompt_for_new_password'}; {'id': '3', 'type': 'parameters', 'children': []}; {'id': '4', 'type': 'block', 'children': ['5']}; {'id': ... | Prompt the user to enter a new password, with confirmation |
def fetchUrls(cls, url, data, urlSearch):
searchUrls = []
if cls.css:
searchFun = data.cssselect
else:
searchFun = data.xpath
searches = makeSequence(urlSearch)
for search in searches:
for match in searchFun(search):
try:
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'fetchUrls'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'v... | Search all entries for given XPath in a HTML page. |
def encode_collection(collection, encoding='utf-8'):
if isinstance(collection, dict):
return dict((encode_collection(key), encode_collection(value)) for key, value in collection.iteritems())
elif isinstance(collection, list):
return [encode_collection(element) for element in input]
elif isin... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'encode_collection'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'val... | Encodes all the string keys and values in a collection with specified encoding |
def _wrap_response(request, data=None, metadata=None, status=200):
envelope = metadata or {}
if data is not None:
envelope['data'] = data
return web.Response(
status=status,
content_type='application/json',
text=json.dumps(
envelope... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '14']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_wrap_response'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11']}; {'id': '4', 'type': 'identifier', 'children':... | Creates the JSON response envelope to be sent back to the client. |
def _assignRootname(self, chip):
extname=self._image[self.scienceExt,chip].header["EXTNAME"].lower()
extver=self._image[self.scienceExt,chip].header["EXTVER"]
expname = self._rootname
self._image[self.scienceExt,chip].rootname=expname + "_" + extname + str(extver)
self._image[sel... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_assignRootname'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value... | Assign a unique rootname for the image based in the expname. |
def add_detector(self, detector_cls):
if not issubclass(detector_cls, detectors.base.Detector):
raise TypeError((
'"%(detector_cls)s" is not a subclass of Detector'
) % locals())
name = detector_cls.filth_cls.type
if name in self._detectors:
ra... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'add_detector'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': ... | Add a ``Detector`` to scrubadub |
def expand_block(self, feat):
chrom_end = self._ref_sizes.get(feat.chrom)
if chrom_end:
if feat.start < self._end_buffer:
feat.start = 0
if feat.stop >= chrom_end - self._end_buffer:
feat.stop = chrom_end
return feat | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'expand_block'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': ... | Expand any blocks which are near the start or end of a contig. |
def output(self, attrs=None, header="Set-Cookie:", sep="\015\012"):
result = []
items = sorted(self.items())
for key, value in items:
result.append(value.output(attrs, header))
return sep.join(result) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '14']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'output'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11']}; {'id': '4', 'type': 'identifier', 'children': [], 'va... | Return a string suitable for HTTP. |
def ftp_walk(ftpconn: FTP, rootpath=''):
current_directory = rootpath
try:
directories, files = directory_listing(ftpconn, current_directory)
except ftplib.error_perm:
return
yield current_directory, directories, files
for name in directories:
new_path = os.path.join(current_... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ftp_walk'}; {'id': '3', 'type': 'parameters', 'children': ['4', '8']}; {'id': '4', 'type': 'typed_parameter', 'children': ['5', '6']}... | Recursively traverse an ftp directory to discovery directory listing. |
def im_history(self, room_id, **kwargs):
return self.__call_api_get('im.history', roomId=room_id, kwargs=kwargs) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'im_history'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value... | Retrieves the history for a private im chat |
def _fast_write(self, outfile, value):
outfile.truncate(0)
outfile.write(str(int(value)))
outfile.flush() | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_fast_write'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'valu... | Function for fast writing to motor files. |
def showKeyboard(self, eInputMode, eLineInputMode, pchDescription, unCharMax, pchExistingText, bUseMinimalMode, uUserValue):
fn = self.function_table.showKeyboard
result = fn(eInputMode, eLineInputMode, pchDescription, unCharMax, pchExistingText, bUseMinimalMode, uUserValue)
return result | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'showKeyboard'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8', '9', '10', '11']}; {'id': '4', 'type': 'ident... | Show the virtual keyboard to accept input |
def _region_code_for_number_from_list(numobj, regions):
national_number = national_significant_number(numobj)
for region_code in regions:
metadata = PhoneMetadata.metadata_for_region(region_code.upper(), None)
if metadata is None:
continue
if metadata.leading_digits is not No... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_region_code_for_number_from_list'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'chi... | Find the region in a list that matches a number |
def unique_authors(self, limit):
seen = set()
if limit == 0:
limit = None
seen_add = seen.add
return [x.author for x in self.sorted_commits[:limit]
if not (x.author in seen or seen_add(x.author))] | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'unique_authors'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Unique list of authors, but preserving order. |
def pop_cell(self, idy=None, idx=None, tags=False):
idy = idy if idy is not None else len(self.body) - 1
idx = idx if idx is not None else len(self.body[idy]) - 1
cell = self.body[idy].pop(idx)
return cell if tags else cell.childs[0] | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '14']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'pop_cell'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11']}; {'id': '4', 'type': 'identifier', 'children': [], '... | Pops a cell, default the last of the last row |
def informed_consent(self):
if self.typeable_handle is None:
consent_url = [self.config['server']['server_url'],
"/get_initial_consent?username="]
consent_url.append(urlsafe_b64encode(self.username))
consent_url.append("&password=")
cons... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'informed_consent'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': '... | Create a URL for the user to give their consent through |
def add_non_hs_service(self, info, address):
if self.protocol and self.protocol != PROTOCOL_DMAP:
return
name = info.properties[b'CtlN'].decode('utf-8')
self._handle_service(
address, name, conf.DmapService(None, port=info.port)) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'add_non_hs_service'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': []... | Add a new device without Home Sharing to discovered list. |
def dump(self, msg, fn_):
if six.PY2:
fn_.write(self.dumps(msg))
else:
fn_.write(self.dumps(msg, use_bin_type=True))
fn_.close() | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'dump'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'se... | Serialize the correct data into the named file object |
def _make_ssh_forward_handler_class(self, remote_address_):
class Handler(_ForwardHandler):
remote_address = remote_address_
ssh_transport = self._transport
logger = self.logger
return Handler | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_make_ssh_forward_handler_class'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'child... | Make SSH Handler class |
def send_request(req=None, method=None, requires_response=True):
if req is None:
return functools.partial(send_request, method=method,
requires_response=requires_response)
@functools.wraps(req)
def wrapper(self, *args, **kwargs):
params = req(self, *args, **k... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '13']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'send_request'}; {'id': '3', 'type': 'parameters', 'children': ['4', '7', '10']}; {'id': '4', 'type': 'default_parameter', 'children':... | Call function req and then send its results via ZMQ. |
def gettext(self, string, domain=None, **variables):
t = self.get_translations(domain)
return t.ugettext(string) % variables | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'gettext'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '9']}; {'id': '4', 'type': 'identifier', 'children': [], 'va... | Translate a string with the current locale. |
def _onOffset(self, dt, businesshours):
if self.n >= 0:
op = self._prev_opening_time(dt)
else:
op = self._next_opening_time(dt)
span = (dt - op).total_seconds()
if span <= businesshours:
return True
else:
return False | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_onOffset'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Slight speedups using calculated values. |
def getLong(t):
i = c_long()
if PL_get_long(t, byref(i)):
return i.value
else:
raise InvalidTypeError("long") | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'getLong'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 't'}; {'id... | If t is of type long, return it, otherwise raise InvalidTypeError. |
def update_file(finfo, sample_info, config, pass_uptodate=False):
storage_dir = utils.safe_makedir(_get_storage_dir(finfo, config))
if finfo.get("type") == "directory":
return _copy_finfo_directory(finfo, storage_dir)
else:
return _copy_finfo(finfo, storage_dir, pass_uptodate=pass_uptodate) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'update_file'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [],... | Update the file in local filesystem storage. |
def build_metadata_class(specfile):
with open(specfile) as f:
spec = json.load(f)
name = os.path.basename(specfile).split('.')[0]
spec['name'] = name
env = get_jinja_env()
metadata_template = env.get_template('metadata.py.jinja2')
with open('pycanvas/meta/{}.py... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'build_metadata_class'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value... | Generate a metadata class for the specified specfile. |
def info(self):
if self._resources is None:
self.__init()
url = self._url + "/info"
return _info.Info(url=url,
securityHandler=self._securityHandler,
proxy_url=self._proxy_url,
proxy_port=self._proxy_port,
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'info'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id... | A read-only resource that returns meta information about the server |
def DeleteOldRuns(self, cutoff_timestamp=None):
if cutoff_timestamp is None:
raise ValueError("cutoff_timestamp can't be None")
return data_store.REL_DB.DeleteOldCronJobRuns(
cutoff_timestamp=cutoff_timestamp) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'DeleteOldRuns'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':... | Deletes runs that were started before the timestamp given. |
def collection(cls, cid):
url = urljoin(config.API_URL, 'collections/%s' % cid)
return Collection(cls.query(url=url)) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'collection'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'c... | Get a Collection record |
def fix_e302(self, result):
add_linenum = 2 - int(result['info'].split()[-1])
cr = '\n' * add_linenum
self.source[result['line'] - 1] = cr + self.source[result['line'] - 1] | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'fix_e302'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel... | Add missing 2 blank lines. |
def snapshot(self):
snap = connState(connection_end=self.connection_end,
read_or_write=self.row,
seq_num=self.seq_num,
compression_alg=type(self.compression),
ciphersuite=type(self.ciphersuite),
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'snapshot'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; ... | This is used mostly as a way to keep the cipher state and the seq_num. |
def FindAnomalies(self):
for grp_name, group in iteritems(self.entry):
shadow = self.shadow.get(grp_name)
gshadows = self.gshadow_members.get(grp_name, [])
if shadow is not None:
diff = self.MemberDiff(group.members, "group", gshadows, "gshadow")
if diff:
msg = "Group/gsh... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'FindAnomalies'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel... | Identify any anomalous group attributes or memberships. |
def subclass(cls, t):
t.doc = None
t.terms = []
t.__class__ = SectionTerm
return t | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'subclass'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cls... | Change a term into a Section Term |
def _number_parser(str_to_number_func):
def _parse_number_value(element_text, state):
value = None
try:
value = str_to_number_func(element_text)
except (ValueError, TypeError):
state.raise_error(InvalidPrimitiveValue,
'Invalid numeric val... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_number_parser'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'st... | Return a function to parse numbers. |
def sets(self):
sets = {}
for x in self._parents:
sets.setdefault(self[x], set()).add(x)
return frozenset(frozenset(v) for v in six.viewvalues(sets)) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'sets'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id... | Returns the equivalence classes as a set of sets. |
def keys(self, pattern, *, encoding=_NOTSET):
return self.execute(b'KEYS', pattern, encoding=encoding) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'keys'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'value... | Returns all keys matching pattern. |
def step_a_new_working_directory(context):
command_util.ensure_context_attribute_exists(context, "workdir", None)
command_util.ensure_workdir_exists(context)
shutil.rmtree(context.workdir, ignore_errors=True) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'step_a_new_working_directory'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': []... | Creates a new, empty working directory |
def ensure_valid_environment_config(module_name, config):
if not config.get('namespace'):
LOGGER.fatal("staticsite: module %s's environment configuration is "
"missing a namespace definition!",
module_name)
sys.exit(1) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ensure_valid_environment_config'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'child... | Exit if config is invalid. |
def _check_lr(name, optimizer, lr):
n = len(optimizer.param_groups)
if not isinstance(lr, (list, tuple)):
return lr * np.ones(n)
if len(lr) != n:
raise ValueError("{} lr values were passed for {} but there are "
"{} param groups.".format(n, name, len(lr)))
return... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_check_lr'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Return one learning rate for each param group. |
def __WaitForVolume(volume, desired_state):
print 'Waiting for volume %s to be %s...' % (volume.id, desired_state)
while True:
volume.update()
sys.stdout.write('.')
sys.stdout.flush()
if volume.status == desired_state:
break
time.sleep(5)
return | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '__WaitForVolume'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value... | Blocks until EBS volume is in desired state. |
def remove_timedim(self, var):
if self.pps and var.dims[0] == 'time':
data = var[0, :, :]
data.attrs = var.attrs
var = data
return var | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'remove_timedim'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Remove time dimension from dataset |
def ip2hex(ip):
parts = ip.split(".")
if len(parts) != 4: return None
ipv = 0
for part in parts:
try:
p = int(part)
if p < 0 or p > 255: return None
ipv = (ipv << 8) + p
except:
return None
return ipv | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ip2hex'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'ip'}; {'id... | Converts an ip to a hex value that can be used with a hex bit mask |
def build(check, sdist):
if check in get_valid_checks():
check_dir = os.path.join(get_root(), check)
else:
check_dir = resolve_path(check)
if not dir_exists(check_dir):
abort('`{}` is not an Agent-based Integration or Python package'.format(check))
check = basepath(ch... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'build'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'check'... | Build a wheel for a check as it is on the repo HEAD |
def calendars(self):
today = datetime.today()
first_day, last_day = monthrange(today.year, today.month)
from_dt = datetime(today.year, today.month, first_day)
to_dt = datetime(today.year, today.month, last_day)
params = dict(self.params)
params.update({
'lang'... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'calendars'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'};... | Retrieves calendars for this month |
def handle(self):
data = cPickle.load(self.rfile)
method = data.pop('method')
try:
retval = getattr(self, 'do_{0}'.format(method))(**data)
except Exception as e:
retval = e
cPickle.dump(retval, self.wfile,
cPickle.HIGHEST_PROTOCOL) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'handle'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'... | Parse the RPC, make the call, and pickle up the return value. |
def createElement(self, tag: str) -> Node:
return create_element(tag, base=self._default_class) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'createElement'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'v... | Create new element whose tag name is ``tag``. |
def service_start(name):
r = salt.utils.http.query(DETAILS['url']+'service/start/'+name, decode_type='json', decode=True)
return r['dict'] | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'service_start'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'nam... | Start a "service" on the REST server |
def as_command(self):
try:
params = self.unbound_func.__click_params__
params.reverse()
del self.unbound_func.__click_params__
except AttributeError:
params = []
help = inspect.getdoc(self.real_func)
if isinstance(help, bytes):
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'as_command'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}... | Creates the click command wrapping the function |
def _visual_width(line):
return len(re.sub(colorama.ansitowin32.AnsiToWin32.ANSI_CSI_RE, "", line)) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_visual_width'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'lin... | Get the the number of columns required to display a string |
def __getSequenceVariants(self, x1, polyStart, polyStop, listSequence) :
if polyStart < len(self.polymorphisms) and polyStart < polyStop:
sequence = copy.copy(listSequence)
ret = []
pk = self.polymorphisms[polyStart]
posInSequence = pk[0]-x1
if posInSequence < len(listSequence) :
for allele in pk... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '__getSequenceVariants'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8']}; {'id': '4', 'type': 'identifier', '... | polyStop, is the polymorphisme at wixh number where the calcul of combinaisons stops |
def update_security_group(self, security_group, body=None):
return self.put(self.security_group_path %
security_group, body=body) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'update_security_group'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children':... | Updates a security group. |
def __DeclareMessageAlias(self, schema, alias_for):
message = extended_descriptor.ExtendedMessageDescriptor()
message.name = self.__names.ClassName(schema['id'])
message.alias_for = alias_for
self.__DeclareDescriptor(message.name)
self.__AddImport('from %s import extra_types' %
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '__DeclareMessageAlias'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children':... | Declare schema as an alias for alias_for. |
def update_version_records(self):
from .__init__ import __version__ as version
with self.connection(commit=True) as connection:
for vrec in self.get_version_records():
if (vrec.rash_version == version and
vrec.schema_version == schema_version):
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'update_version_records'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'val... | Update rash_info table if necessary. |
def _insert_new_layers(self, new_layers, start_node_id, end_node_id):
new_node_id = self._add_node(deepcopy(self.node_list[end_node_id]))
temp_output_id = new_node_id
for layer in new_layers[:-1]:
temp_output_id = self.add_layer(layer, temp_output_id)
self._add_edge(new_layer... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_insert_new_layers'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children... | Insert the new_layers after the node with start_node_id. |
def init(self):
if hasattr(self, 'data'):
return
if isinstance(self.dstore, str):
self.dstore = hdf5.File(self.dstore, 'r')
else:
self.dstore.open('r')
if self.sids is None:
self.sids = self.dstore['sitecol'].sids
oq = self.dstore['... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'init'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id... | Read the poes and set the .data attribute with the hazard curves |
def touch_object(self, objects: Set[Object]) -> Set[Object]:
objects_per_box = self._separate_objects_by_boxes(objects)
return_set = set()
for box, box_objects in objects_per_box.items():
candidate_objects = box.objects
for object_ in box_objects:
for cand... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '13', '19']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'touch_object'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'v... | Returns all objects that touch the given set of objects. |
def register(cls):
registry_entry = RegistryEntry(category = cls.category, namespace = cls.namespace, name = cls.name, cls=cls)
if registry_entry not in registry and not exists_in_registry(cls.category, cls.namespace, cls.name):
registry.append(registry_entry)
else:
log.warn("Class {0} alrea... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'register'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'cls'}; {... | Register a given model in the registry |
def _checkSize(self):
if self._item_height is not None:
sz = min(self._max_height_items, self.count()) * self._item_height + 5
sz = max(sz, 20)
self.setMinimumSize(0, sz)
self.setMaximumSize(1000000, sz)
self.resize(self.width(), sz) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_checkSize'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}... | Automatically resizes widget to display at most max_height_items items |
def non_increasing(values):
return all(x >= y for x, y in zip(values, values[1:])) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'non_increasing'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'va... | True if values are not increasing. |
def trainOn(self, dstream):
self._validate(dstream)
def update(rdd):
self._model.update(rdd, self._decayFactor, self._timeUnit)
dstream.foreachRDD(update) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'trainOn'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self... | Train the model on the incoming dstream. |
def add_def(self, def_item):
self.defs.append(def_item)
for other in self.others:
other.add_def(def_item) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'add_def'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self... | Adds a def universally. |
def clear_threads(self):
for aThread in compat.itervalues(self.__threadDict):
aThread.clear()
self.__threadDict = dict() | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'clear_threads'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel... | Clears the threads snapshot. |
def copy_any(src, dst, only_missing=False):
if not only_missing:
remove_if_exist(dst)
if os.path.exists(src):
if os.path.isdir(src):
if not only_missing:
shutil.copytree(src, dst, symlinks=False, ignore=None)
else:
for dirpath, filepath in ... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'copy_any'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':... | Copy a file or a directory tree, deleting the destination before processing |
def getInstruments(self):
query = {"portal_type": "Instrument", "is_active": True}
if self.getRestrictToMethod():
query.update({
"getMethodUIDs": {
"query": api.get_uid(self.getRestrictToMethod()),
"operator": "or",
}
... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'getInstruments'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'se... | Get the allowed instruments |
def on_step_end(self, **kwargs:Any)->None:
"Update the params from master to model and zero grad."
self.learn.model.zero_grad()
master2model(self.model_params, self.master_params, self.flat_master) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'on_step_end'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'va... | Update the params from master to model and zero grad. |
def _process_table(self, cache=True):
table = self.source()
assert not isinstance(table, None.__class__), \
"{}.source needs to return something, not None".format(self.__class__.__name__)
table = post_process(table, self.post_processors())
if cache:
self.to_cache(... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_process_table'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Applies the post processors |
def locale_first_weekday():
first_weekday = 6
try:
process = os.popen("locale first_weekday week-1stday")
week_offset, week_start = process.read().split('\n')[:2]
process.close()
week_start = dt.date(*time.strptime(week_start, "%Y%m%d")[:3])
week_offset = dt.timedelta(int... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '4']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'locale_first_weekday'}; {'id': '3', 'type': 'parameters', 'children': []}; {'id': '4', 'type': 'block', 'children': ['5', '9', '106']}... | figure if week starts on monday or sunday |
def list_domains(self):
domains = []
for cookie in iter(self):
if cookie.domain not in domains:
domains.append(cookie.domain)
return domains | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'list_domains'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self... | Utility method to list all the domains in the jar. |
def run():
args = parse_args()
if args.verbose:
log_level = logging.DEBUG
else:
log_level = logging.INFO
logging.basicConfig(
level=log_level,
format='%(asctime)s %(levelname)s %(name)s: %(message)s')
if not args.verbose:
req_logger = logging.getLogger('reques... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '4']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'run'}; {'id': '3', 'type': 'parameters', 'children': []}; {'id': '4', 'type': 'block', 'children': ['5', '11', '30', '42', '66', '75',... | Command line entrypoint for the ``refresh-lsst-bib`` program. |
def raise_for_missing_namespace(self, line: str, position: int, namespace: str, name: str) -> None:
if not self.has_namespace(namespace):
raise UndefinedNamespaceWarning(self.get_line_number(), line, position, namespace, name) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '21', '23']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'raise_for_missing_namespace'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '9', '13', '17']}; {'id': '4', 'type': ... | Raise an exception if the namespace is not defined. |
def fit(self, X, y):
self.glm_model = self.glm_partial(y, X)
self.glm_results = self.glm_model.fit()
return self | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'fit'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel... | Pretend to be a sklearn estimator, fit is called on creation |
def parse(binary, **params):
encoding = params.get('charset', 'UTF-8')
return json.loads(binary, encoding=encoding) | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'parse'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'binary... | Turns a JSON structure into a python object. |
def _set_condition(self, condition):
assert isinstance(condition, CodeExpression.TYPES)
self.condition = condition | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_set_condition'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'... | Set the condition for this control flow structure. |
def retrieve(self, request, _id):
_id = deserialize(_id)
retrieved = self.collection.find_one({'_id': _id})
if retrieved:
return Response(serialize(retrieved))
else:
return Response(
response=serialize(
DocumentNotFoundError(sel... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'retrieve'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':... | Returns the document containing the given _id or 404 |
def insertContinuousSet(self, continuousSet):
try:
models.ContinuousSet.create(
id=continuousSet.getId(),
datasetid=continuousSet.getParentContainer().getId(),
referencesetid=continuousSet.getReferenceSet().getId(),
name=continuousSet.g... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'insertContinuousSet'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'v... | Inserts a the specified continuousSet into this repository. |
def owner(self):
if self._owner:
return self._owner
elif not self.abstract:
return self.read_meta()._owner
raise EmptyDocumentException() | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'owner'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'i... | Username of document creator |
def enforce_versioning(force=False):
connect_str, repo_url = get_version_data()
LOG.warning("Your database uses an unversioned benchbuild schema.")
if not force and not ui.ask(
"Should I enforce version control on your schema?"):
LOG.error("User declined schema versioning.")
retu... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'enforce_versioning'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'default_parameter', 'children': ['5',... | Install versioning on the db. |
def find_diff_violations(self, patch):
violations = collections.defaultdict(list)
for line in patch.changed_lines:
file_violations = self._all_violations.get(line['file_name'])
if not file_violations:
continue
line_violations = [v for v in file_violati... | {'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'find_diff_violations'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], '... | Uses the diff for this build to find changed lines that also have violations. |
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