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def find_ge(self, item): 'Return first item with a key >= equal to item. Raise ValueError if not found' k = self._key(item) i = bisect_left(self._keys, k) if i != len(self): return self._items[i] raise ValueError('No item found with key at or above: %r' % (k,))
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Return first item with a key >= equal to item. Raise ValueError if not found
def stdin_to_vobject(self, lines): cal = iCalendar() for event in self._parse_remind('-', lines)['-'].values(): self._gen_vevent(event, cal.add('vevent')) return cal
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Return iCal object of the Remind commands in lines
def filter_contour(imageFile, opFile): im = Image.open(imageFile) im1 = im.filter(ImageFilter.CONTOUR) im1.save(opFile)
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convert an image by applying a contour
def _parse_attribute( self, element, attribute, state ): parsed_value = self._default attribute_value = element.get(attribute, None) if attribute_value is not None: parsed_value = self._parser_func(attribute_value, state) el...
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Parse the primitive value within the XML element's attribute.
def create_option_pool(self): return OptionPool( self.networkapi_url, self.user, self.password, self.user_ldap)
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Get an instance of option_pool services facade.
def export(self, out_filename): with zipfile.ZipFile(out_filename, 'w', zipfile.ZIP_DEFLATED) as arc: id_list = list(self.get_thread_info()) for num, my_info in enumerate(id_list): logging.info('Working on item %i : %s', num, my_info['number']) my_thread =...
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Export desired threads as a zipfile to out_filename.
def documents(cls, filter=None, **kwargs): documents = [cls(document) for document in cls.find(filter, **kwargs)] return [document for document in documents if document.document]
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Returns a list of Documents if any document is filtered
def handle_purge(environ, start_response): from utils import is_valid_security, get_cached_files from settings import DEBUG server = environ['SERVER_NAME'] try: request_uri = get_path(environ) path_and_query = request_uri.lstrip("/") query_string = environ.get('QUERY_STRING', '')...
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Handle a PURGE request.
def disconnect(self): self.__stop_timer() for event in self.__in_flight.values(): event.set() self.__mqtt.disconnect() thread = threading.Thread(target=self.__mqtt.loop_stop) thread.daemon = True thread.start() thread.join(4)
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Disconnects from the MQTT server
async def run_checks(self): async for check in self.fsm.health_check(): yield check async for check in self.self_check(): yield check for check in MiddlewareManager.health_check(): yield check
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Run checks on itself and on the FSM
def cublasZtpsv(handle, uplo, trans, diag, n, AP, x, incx): status = _libcublas.cublasZtpsv_v2(handle, _CUBLAS_FILL_MODE[uplo], _CUBLAS_OP[trans], _CUBLAS_DIAG[diag], ...
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Solve complex triangular-packed system with one right-hand size.
def run_with_werkzeug(self, **options): threaded = self.threads is not None and (self.threads > 0) self.app.run( host=self.host, port=self.port, debug=self.debug, threaded=threaded, **options )
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Run with werkzeug simple wsgi container.
def staking_leaderboard(round_num=0, tournament=1): click.echo(prettify(napi.get_staking_leaderboard(tournament=tournament, round_num=round_num)))
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Retrieves the staking competition leaderboard for the given round.
def pubmed_citation(args=sys.argv[1:], out=sys.stdout): parser = argparse.ArgumentParser( description='Get a citation using a PubMed ID or PubMed URL') parser.add_argument('query', help='PubMed ID or PubMed URL') parser.add_argument( '-m', '--mini', action='store_true', help='get mini citati...
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Get a citation via the command line using a PubMed ID or PubMed URL
def newest(self): if self._order_by == 'newest': return self.first if self._order_by == 'oldest': return self.last return max(self.entries, key=lambda x: (x.date, x.id))
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Gets the newest entry in the view, regardless of sort order
def _fit_bmr_model(self, X, y): self.f_bmr = BayesMinimumRiskClassifier() X_bmr = self.predict_proba(X) self.f_bmr.fit(y, X_bmr) return self
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Private function used to fit the BayesMinimumRisk model.
def to_match(self): self.validate() mark_name, field_name = self.location.get_location_name() validate_safe_string(mark_name) validate_safe_string(field_name) return u'%s.%s' % (mark_name, field_name)
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Return a unicode object with the MATCH representation of this GlobalContextField.
def V_(x, requires_grad=False, volatile=False): return create_variable(x, volatile=volatile, requires_grad=requires_grad)
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equivalent to create_variable, which creates a pytorch tensor
def disbatch(self): ret = [] for low in self.lowstate: if not self._verify_client(low): return if self.token is not None and 'token' not in low: low['token'] = self.token if not (('token' in low) or ('username' in lo...
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Disbatch all lowstates to the appropriate clients
def create_api_deployment(self): try: self.client.create_deployment(restApiId=self.api_id, stageName=self.env) self.log.info('Created a deployment resource.') except botocore.exceptions.ClientError as error: error_code = error.response['Error']['Code'] if ...
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Create API deployment of ENV name.
def thumbnail_source_for_display_item(self, ui, display_item: DisplayItem.DisplayItem) -> ThumbnailSource: with self.__lock: thumbnail_source = self.__thumbnail_sources.get(display_item) if not thumbnail_source: thumbnail_source = ThumbnailSource(ui, display_item) ...
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Returned ThumbnailSource must be closed.
def _create_union_types_specification(schema_graph, graphql_types, hidden_classes, base_name): def types_spec(): return [ graphql_types[x] for x in sorted(list(schema_graph.get_subclass_set(base_name))) if x not in hidden_classes ] return types_spec
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Return a function that gives the types in the union type rooted at base_name.
def Parse(self, stat, file_object, knowledge_base): _, _ = stat, knowledge_base field_parser = NtpdFieldParser() for line in field_parser.ParseEntries( utils.ReadFileBytesAsUnicode(file_object)): field_parser.ParseLine(line) yield rdf_config_file.NtpConfig( config=field_parser.conf...
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Parse a ntp config into rdf.
def sky2px(wcs,ra,dec,dra,ddec,cell, beam): dra = beam if dra<beam else dra ddec = beam if ddec<beam else ddec offsetDec = int((ddec/2.)/cell) offsetRA = int((dra/2.)/cell) if offsetDec%2==1: offsetDec += 1 if offsetRA%2==1: offsetRA += 1 raPix,decPix = map(int, wcs.wcs2pix(r...
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convert a sky region to pixel positions
def recordlookup(table, key, dictionary=None): if dictionary is None: dictionary = dict() it = iter(table) hdr = next(it) flds = list(map(text_type, hdr)) keyindices = asindices(hdr, key) assert len(keyindices) > 0, 'no key selected' getkey = operator.itemgetter(*keyindices) for ...
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Load a dictionary with data from the given table, mapping to record objects.
def _normalize_batch(b:Tuple[Tensor,Tensor], mean:FloatTensor, std:FloatTensor, do_x:bool=True, do_y:bool=False)->Tuple[Tensor,Tensor]: "`b` = `x`,`y` - normalize `x` array of imgs and `do_y` optionally `y`." x,y = b mean,std = mean.to(x.device),std.to(x.device) if do_x: x = normalize(x,mean,std) if...
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`b` = `x`,`y` - normalize `x` array of imgs and `do_y` optionally `y`.
def _geom_points(geom): if geom['type'] == 'Point': yield tuple(geom['coordinates']) elif geom['type'] in ('MultiPoint', 'LineString'): for position in geom['coordinates']: yield tuple(position) else: raise InvalidFeatureError( "Unsupported geometry type:{0}"....
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GeoJSON geometry to a sequence of point tuples
def printSequences(x, formatString="%d"): [seqLen, numElements] = x.shape for i in range(seqLen): s = "" for j in range(numElements): s += formatString % x[i][j] print s
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Print a bunch of sequences stored in a 2D numpy array.
async def _get_tshark_process(self, packet_count=None, stdin=None): if self.use_json: output_type = 'json' if not tshark_supports_json(self.tshark_path): raise TSharkVersionException("JSON only supported on Wireshark >= 2.2.0") else: output_type = 'psm...
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Returns a new tshark process with previously-set parameters.
def partition(self, ref=None, **kwargs): from .exc import NotFoundError from six import text_type if ref: for p in self.partitions: if (text_type(ref) == text_type(p.name) or text_type(ref) == text_type(p.id) or text_type(ref) == text_type(...
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Returns partition by ref.
def _validate_func_args(func, kwargs): args, varargs, varkw, defaults = inspect.getargspec(func) if set(kwargs.keys()) != set(args[1:]): raise TypeError("decorator kwargs do not match %s()'s kwargs" % func.__name__)
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Validate decorator args when used to decorate a function.
def detect_port(port): socket_test = socket.socket(socket.AF_INET,socket.SOCK_STREAM) try: socket_test.connect(('127.0.0.1', int(port))) socket_test.close() return True except: return False
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Detect if the port is used
def _pwr_optfcn(df, loc): I = _lambertw_i_from_v(df['r_sh'], df['r_s'], df['nNsVth'], df[loc], df['i_0'], df['i_l']) return I * df[loc]
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Function to find power from ``i_from_v``.
def retrieve_layers(self, *args, **options): queryset = Q() if len(args) < 1: all_layers = Layer.objects.published().external() if options['exclude']: exclude_list = options['exclude'].replace(' ', '').split(',') return all_layers.exclude(slug__in=...
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Retrieve specified layers or all external layers if no layer specified.
def _set_line_indent(src, line, indent): if not indent: return line idt = [] for c in src: if c not in ['\t', ' ']: break idt.append(c) return ''.join(idt) + line.lstrip()
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Indent the line with the source line.
def _call_mount(self, volume, mountpoint, type=None, opts=""): if opts and not opts.endswith(','): opts += "," opts += 'loop,offset=' + str(volume.offset) + ',sizelimit=' + str(volume.size) cmd = ['mount', volume.get_raw_path(), mountpoint, '-o', opts] if not volume.disk.read...
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Calls the mount command, specifying the mount type and mount options.
def draw_text(self, text:str, x:float, y:float, *, font_name:str, font_size:float, fill:Color) -> None: pass
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Draws the given text at x,y.
def summary(self): return "\n".join([ "Transaction:", " When: " + self.date.strftime("%a %d %b %Y"), " Description: " + self.desc.replace('\n', ' '), " For amount: {}".format(self.amount), " From: {}".format( ", ".joi...
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Return a string summary of transaction
def clear(self): self.log(u"Clearing cache...") for file_handler, file_info in self.cache.values(): self.log([u" Removing file '%s'", file_info]) gf.delete_file(file_handler, file_info) self._initialize_cache() self.log(u"Clearing cache... done")
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Clear the cache and remove all the files from disk.
def update_grid(self): info_map = self.ms_game.get_info_map() for i in xrange(self.ms_game.board_height): for j in xrange(self.ms_game.board_width): self.grid_wgs[(i, j)].info_label(info_map[i, j]) self.ctrl_wg.move_counter.display(self.ms_game.num_moves) if s...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'update_grid'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'...
Update grid according to info map.
def commentmap(self, cache=True): if self.__commentmap is not None and cache==True: return self.__commentmap else: x = self.xml(src='word/comments.xml') d = Dict() if x is None: return d for comment in x.root.xpath("w:comment", namespaces=self....
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'commentmap'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 's...
return the comments from the docx, keyed to string id.
def browse_path(self, window): text = self.gui_helper.create_file_chooser_dialog("Choose project directory", self.path_window, name="Select") if text is not None: self.dir_name.set_text(text)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'browse_path'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': '...
Function opens the file chooser dialog for settings project dir
def GetUcsMethodMeta(classId, key): if classId in _MethodFactoryMeta: if key in _MethodFactoryMeta[classId]: return _MethodFactoryMeta[classId][key] return None
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'GetUcsMethodMeta'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'valu...
Methods returns the method meta of the ExternalMethod.
def to_code_array(self): state = None first_line = True self.pys_file.seek(0) for line in self.pys_file: if first_line: if line == "[Pyspread save file version]\n": first_line = False else: raise ValueErr...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'to_code_array'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel...
Replaces everything in code_array from pys_file
def rootChild_resetPassword(self, req, webViewer): from xmantissa.signup import PasswordResetResource return PasswordResetResource(self.store)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'rootChild_resetPassword'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children...
Return a page which will allow the user to re-set their password.
def _list_format(self, occur): if self.keys: self.attr["nma:key"] = " ".join(self.keys) keys = ''.join([self.keymap[k].serialize(occur=2) for k in self.keys]) else: keys = "" if self.maxEl: self.attr["nma:max-elements"] ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_list_format'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': ...
Return the serialization format for a _list_ node.
def add_size_info (self): if self.is_directory(): return filename = self.get_os_filename() self.size = fileutil.get_size(filename) self.modified = datetime.utcfromtimestamp(fileutil.get_mtime(filename))
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'add_size_info'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'sel...
Get size of file content and modification time from filename path.
def validate_empty_attributes(fully_qualified_name: str, spec: Dict[str, Any], *attributes: str) -> List[EmptyAttributeError]: return [ EmptyAttributeError(fully_qualified_name, spec, attribute) for attribute in attributes if not spec.get(attribute, None) ]
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '23', '29']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'validate_empty_attributes'}; {'id': '3', 'type': 'parameters', 'children': ['4', '8', '18']}; {'id': '4', 'type': 'typed_parame...
Validates to ensure that a set of attributes do not contain empty values
def normalize(s, replace_spaces=True): whitelist = (' -' + string.ascii_letters + string.digits) if type(s) == six.binary_type: s = six.text_type(s, 'utf-8', 'ignore') table = {} for ch in [ch for ch in s if ch not in whitelist]: if ch not in table: try: repla...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'normalize'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 's'...
Normalize non-ascii characters to their closest ascii counterparts
def content_break(self, el): should_break = False if self.type == 'odp': if el.name == 'page' and el.namespace and el.namespace == self.namespaces['draw']: should_break = True return should_break
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'content_break'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':...
Break on specified boundaries.
def listen_dataset_events(self, owner_id, project_id, dataset_id): if not self._user_id: raise AmigoCloudError(self.error_msg['logged_in_websockets']) url = '/users/%s/projects/%s/datasets/%s/start_websocket_session' response = self.get(url % (owner_id, project_id, dataset_id)) ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'listen_dataset_events'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'child...
Authenticate to start using dataset events.
def _process_version_lines(self): if len(self._lines_seen["version"]) > 1: self._add_error(_("Multiple version lines appeared.")) elif self._lines_seen["version"][0] != 1: self._add_error(_("The version must be on the first line."))
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_process_version_lines'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'val...
Process version line rules.
async def create(self, **kwargs): try: obj = self._meta.object_class() self.data.update(kwargs) await obj.deserialize(self.data) await obj.insert(db=self.db) return await obj.serialize() except Exception as ex: logger.exception(ex) ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'create'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'...
Corresponds to POST request without a resource identifier, inserting a document into the database
def dispatch(self, *args, **kwargs): return super(GetAppListJsonView, self).dispatch(*args, **kwargs)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'dispatch'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':...
Only staff members can access this view
def read_record(self, dtype, shape=1, byteorder=None): rec = numpy.rec try: record = rec.fromfile(self._fh, dtype, shape, byteorder=byteorder) except Exception: dtype = numpy.dtype(dtype) if shape is None: shape = self._size // dtype.itemsize ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'read_record'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '9']}; {'id': '4', 'type': 'identifier', 'children': [],...
Return numpy record from file.
def webdriver_assert(self, assertion, failure_message='Failed Assertion'): try: assert assertion() is True except AssertionError: raise WebDriverAssertionException.WebDriverAssertionException(self.driver_wrapper, failure_message) return True
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'webdriver_assert'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], ...
Assert the assertion, but throw a WebDriverAssertionException if assertion fails
def save_loop(self): last_hash = hash(repr(self.hosts)) while self.running: eventlet.sleep(self.save_interval) next_hash = hash(repr(self.hosts)) if next_hash != last_hash: self.save() last_hash = next_hash
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'save_loop'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'};...
Saves the state if it has changed.
def pull(self): for item in self.input_stream: print('%s -' % item['timestamp'], end='') if item['transport']: print(item['transport']['type'], end='') packet_type = item['packet']['type'] print(packet_type, end='') packet = item['packe...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'pull'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {'id...
Print out summary information about each packet from the input_stream
def ability(cls, id_, name, function_type, ability_id, general_id=0): assert function_type in ABILITY_FUNCTIONS return cls(id_, name, ability_id, general_id, function_type, FUNCTION_TYPES[function_type], None)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '12']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ability'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '8', '9']}; {'id': '4', 'type': 'identifier', 'children...
Define a function represented as a game ability.
def secret_loader(self, callback): if not callback or not callable(callback): raise Exception("Please pass in a callable that loads secret keys") self.secret_loader_callback = callback return callback
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'secret_loader'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':...
Decorate a method that receives a key id and returns a secret key
def _check_mapper(self, mapper): if not hasattr(mapper, 'parse') or not callable(mapper.parse): raise ValueError('mapper must implement parse()') if not hasattr(mapper, 'format') or not callable(mapper.format): raise ValueError('mapper must implement format()')
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_check_mapper'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value':...
Check that the mapper has valid signature.
def _filter_messages(messages, products=None, levels=None): if products is None: products = [] if levels is None: levels = [] segments = [] bounds = len(messages) for i, message in enumerate(messages): if (message[3] in products or len(products) == 0) and \ (m...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_filter_messages'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8']}; {'id': '4', 'type': 'identifier', 'children': [],...
filter messages for desired products and levels.
def backup(path, name=None): from PyHardLinkBackup.phlb.phlb_main import backup backup(path, name)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'backup'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'path'...
Start a Backup run
def info(self, callback=None, **kwargs): self.client.fetch( self.mk_req('', method='GET', **kwargs), callback = callback )
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'info'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 's...
Get the basic info from the current cluster.
def crud_url_name(model, action, prefix=None): if prefix is None: prefix = "" app_label = model._meta.app_label model_lower = model.__name__.lower() return '%s%s_%s_%s' % (prefix, app_label, model_lower, action)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'crud_url_name'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'va...
Returns url name for given model and action.
def _format_params(self, type_, params): if 'initial_state' in params: initial_state = params['initial_state'] if isinstance(initial_state, Mapping): initial_state_list = [3]*self.properties['num_qubits'] low = -1 if type_ == 'ising' else 0 ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_format_params'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'v...
Reformat some of the parameters for sapi.
def root_dataset(self): ds = self.dataset(ROOT_CONFIG_NAME_V) ds._database = self return ds
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Return the root dataset, which hold configuration values for the library
def can(self, event): return [t.new_state for t in self._transitions if t.event.equals(event)]
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'can'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; ...
returns a list of states that can result from processing this event
def create(spellchecker_cache_path): user_dictionary = os.path.join(os.getcwd(), "DICTIONARY") user_words = read_dictionary_file(user_dictionary) valid_words = Dictionary(valid_words_set(user_dictionary, user_words), "valid_words", [user_dictionary],...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'create'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'spellcheck...
Create a Dictionary at spellchecker_cache_path with valid words.
def ExceptionHook(exctype, value, tb): for line in traceback.format_exception_only(exctype, value): log.error(line.replace('\n', '')) for line in traceback.format_tb(tb): log.error(line.replace('\n', '')) sys.__excepthook__(exctype, value, tb)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ExceptionHook'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'va...
A custom exception handler that logs errors to file.
def add(self, value): if self._disposed: raise ValueError( 'Cannot add value: this _WatchStore instance is already disposed') self._data.append(value) if hasattr(value, 'nbytes'): self._in_mem_bytes += value.nbytes self._ensure_bytes_limits()
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'add'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; ...
Add a tensor the watch store.
def base_url(klass, space_id='', resource_id=None, environment_id=None, **kwargs): url = "spaces/{0}".format( space_id) if environment_id is not None: url = url = "{0}/environments/{1}".format(url, environment_id) url = "{0}/{1}".format( url, base_...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '16']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'base_url'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11', '14']}; {'id': '4', 'type': 'identifier', 'children':...
Returns the URI for the resource.
def exit_with_error(message): click.secho(message, err=True, bg='red', fg='white') sys.exit(0)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'exit_with_error'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'm...
Display formatted error message and exit call
def add_build_configuration_to_set( set_id=None, set_name=None, config_id=None, config_name=None): content = add_build_configuration_to_set_raw(set_id, set_name, config_id, config_name) if content: return utils.format_json(content)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '16']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'add_build_configuration_to_set'}; {'id': '3', 'type': 'parameters', 'children': ['4', '7', '10', '13']}; {'id': '4', 'type': 'default...
Add a build configuration to an existing BuildConfigurationSet
def prepare_data_loader(args, dataset, vocab, test=False): dataset = dataset.transform(lambda s1, s2, label: (vocab(s1), vocab(s2), label), lazy=False) batchify_fn = btf.Tuple(btf.Pad(), btf.Pad(), btf.Stack(dtype='int32')) data_lengths = [max(len(d[0]), len(d[1])) for d in d...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '10']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'prepare_data_loader'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'childr...
Read data and build data loader.
def AddNoiseToLatLng(lat, lng): m_per_tenth_lat = Distance(lat, lng, lat + 0.1, lng) m_per_tenth_lng = Distance(lat, lng, lat, lng + 0.1) lat_per_100m = 1 / m_per_tenth_lat * 10 lng_per_100m = 1 / m_per_tenth_lng * 10 return (lat + (lat_per_100m * 5 * (random.random() * 2 - 1)), lng + (lng_per_100m ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'AddNoiseToLatLng'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'valu...
Add up to 500m of error to each coordinate of lat, lng.
def wait(self, log_file): "Wait until the process is ready." lines = map(self.log_line, self.filter_lines(self.get_lines(log_file))) return any( std.re.search(self.pattern, line) for line in lines )
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'wait'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'};...
Wait until the process is ready.
def ExpireRules(self): rules = self.Get(self.Schema.RULES) new_rules = self.Schema.RULES() now = time.time() * 1e6 expired_session_ids = set() for rule in rules: if rule.expires > now: new_rules.Append(rule) else: for action in rule.actions: if action.hunt_id: ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ExpireRules'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'...
Removes any rules with an expiration date in the past.
def encode(self, s): sentence = s tokens = sentence.strip().split() if self._replace_oov is not None: tokens = [t if t in self._token_to_id else self._replace_oov for t in tokens] ret = [self._token_to_id[tok] for tok in tokens] return ret[::-1] if self._reverse else ret
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'encode'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'...
Converts a space-separated string of tokens to a list of ids.
def ast_to_headings(node): Heading = namedtuple('Heading', ['level', 'title']) level = None walker = node.walker() headings = [] event = walker.nxt() while event is not None: entering = event['entering'] node = event['node'] if node.t == 'Heading': if entering...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ast_to_headings'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'n...
Walks AST and returns a list of headings
def _format_help_dicts(help_dicts, display_defaults=False): help_strs = [] for help_dict in help_dicts: help_str = "%s (%s" % ( help_dict["var_name"], "Required" if help_dict["required"] else "Optional", ) if help_dict.get("default") and display_defaults: ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_format_help_dicts'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'va...
Format the output of _generate_help_dicts into a str
def text_from_affiliation_elements(department, institution, city, country): "format an author affiliation from details" return ', '.join(element for element in [department, institution, city, country] if element)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'text_from_affiliation_elements'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier...
format an author affiliation from details
def run_with_pmids(model_path, pmids): from indra.tools.machine.machine import run_with_pmids_helper run_with_pmids_helper(model_path, pmids)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'run_with_pmids'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'...
Run with given list of PMIDs.
def annotate_gemini(data, retriever=None): r = dd.get_variation_resources(data) return all([r.get(k) and objectstore.file_exists_or_remote(r[k]) for k in ["exac", "gnomad_exome"]])
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '8']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'annotate_gemini'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value...
Annotate with population calls if have data installed.
def _null_date(self): try: return self.__null_date except AttributeError: number_settings = self._target.getNumberFormatSettings() d = number_settings.getPropertyValue('NullDate') self.__null_date = datetime.datetime(d.Year, d.Month, d.Day) return ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_null_date'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}...
Returns date which is represented by a integer 0.
def checkConfig(): config_file_dir = os.path.join(cwd, "config.py") if os.path.exists(config_file_dir): print("Making a backup of your config file!") config_file_dir2 = os.path.join(cwd, "config.py.oldbak") copyfile(config_file_dir, config_file_dir2)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '4']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'checkConfig'}; {'id': '3', 'type': 'parameters', 'children': []}; {'id': '4', 'type': 'block', 'children': ['5', '17']}; {'id': '5', '...
If the config.py file exists, back it up
def join(tokens, start, result): texts = [] if len(result) > 0: for e in result: for child in e.iter(): if child.text is not None: texts.append(child.text) return [E(result[0].tag, ' '.join(texts))]
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'join'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'to...
Join tokens into a single string with spaces between.
def date_from_quarter(base_date, ordinal, year): interval = 3 month_start = interval * (ordinal - 1) if month_start < 0: month_start = 9 month_end = month_start + interval if month_start == 0: month_start = 1 return [ datetime(year, month_start, 1), datetime(year,...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'date_from_quarter'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [],...
Extract date from quarter of a year
def ret_list_minions(self): tgt = _tgt_set(self.tgt) return self._ret_minions(tgt.intersection)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'ret_list_minions'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': '...
Return minions that match via list
def visit_Starred(self, node: AST, dfltChaining: bool = True) -> str: with self.op_man(node): return f"*{self.visit(node.value)}"
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '14', '16']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'visit_Starred'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '9']}; {'id': '4', 'type': 'identifier', 'children': ...
Return representation of starred expresssion.
def to_dict(self): return {name: {'value': self._process_value(str, value)} for name, value in self._ea_dict.items() if not (value is None or value == "" or value == [])}
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'to_dict'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; {...
Converts extensible attributes into the format suitable for NIOS.
def handle_set_row(self): row = self.reader.int() logger.info(" -> row: %s", row) self.controller.row = row
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'handle_set_row'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'se...
Read incoming row change from server
def url(self, key): return urlunparse((self.protocol, '%s:%s' % (self.domain, self.port), '%s/api/v1%s' % (self.prefix, URLS[key]), '', '', ''))
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'url'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'}; ...
Creates a full URL to the API using urls dict
def wr_tsv(self, fout_tsv, goea_results, **kws): prt_flds = kws.get('prt_flds', self.get_prtflds_default(goea_results)) tsv_data = MgrNtGOEAs(goea_results).get_goea_nts_prt(prt_flds, **kws) RPT.wr_tsv(fout_tsv, tsv_data, **kws)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '9']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'wr_tsv'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7']}; {'id': '4', 'type': 'identifier', 'children': [], 'valu...
Write tab-separated table data to file
def upload_hub(hub, host, remote_dir, user=None, port=22, rsync_options=RSYNC_OPTIONS, staging=None): hub.render() if staging is None: staging = tempfile.mkdtemp() staging, linknames = stage_hub(hub, staging=staging) local_dir = os.path.join(staging) upload(host, user, local_dir=local_dir, r...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '19']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'upload_hub'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6', '7', '10', '13', '16']}; {'id': '4', 'type': 'identifier'...
Renders, stages, and uploads a hub.
def _check_type(name, obj, expected_type): if not isinstance(obj, expected_type): raise TypeError( '"%s" must be an a %s' % (name, expected_type.__name__) )
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '7']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_check_type'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '6']}; {'id': '4', 'type': 'identifier', 'children': [], 'valu...
Raise a TypeError if object is not of expected type
def duration(label, stop_it=True, stop_at=None): if label not in labels: return None if "duration" in labels[label]: return Duration(labels[label]["duration"]) if stop_it: return stop(label, at=stop_at) else: return None
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '11']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'duration'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8']}; {'id': '4', 'type': 'identifier', 'children': [], 'value'...
Returns duration in seconds for label
def call(cmd, shell=True, cwd=None, universal_newlines=True, stderr=STDOUT): return Shell._run(call, cmd, shell=shell, cwd=cwd, stderr=stderr, universal_newlines=universal_newlines)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '17']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'call'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5', '8', '11', '14']}; {'id': '4', 'type': 'identifier', 'children': [],...
Just execute a specific command.
def _create_penwidth_combo(self): choices = map(unicode, xrange(12)) self.pen_width_combo = \ _widgets.PenWidthComboBox(self, choices=choices, style=wx.CB_READONLY, size=(50, -1)) self.pen_width_combo.SetToolTipString(_(u"Border width")) ...
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '5']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': '_create_penwidth_combo'}; {'id': '3', 'type': 'parameters', 'children': ['4']}; {'id': '4', 'type': 'identifier', 'children': [], 'val...
Create pen width combo box
def append(self, item): if len(self) == 0: self.index = 0 self.items.append(item)
{'id': '0', 'type': 'module', 'children': ['1']}; {'id': '1', 'type': 'function_definition', 'children': ['2', '3', '6']}; {'id': '2', 'type': 'function_name', 'children': [], 'value': 'append'}; {'id': '3', 'type': 'parameters', 'children': ['4', '5']}; {'id': '4', 'type': 'identifier', 'children': [], 'value': 'self'...
Adds a new item to the end of the collection.