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7 values
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29 values
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stringclasses
14 values
3D
OpenMS/OpenMS
src/openms/source/FORMAT/SpecArrayFile.cpp
.cpp
544
21
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MSPGenericFile.cpp
.cpp
11,368
320
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Domen...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ZlibCompression.cpp
.cpp
5,064
138
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest, Chris Bielow $ // -----------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ParamXMLFile.cpp
.cpp
12,171
364
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Stephan Aiche $ // --------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/TextFile.cpp
.cpp
4,409
171
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/SwathFile.cpp
.cpp
15,240
382
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/PercolatorInfile.cpp
.cpp
23,403
653
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg, Johannes von Kleist $ // --------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MzTabM.cpp
.cpp
31,386
745
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka $ // $Authors: Oliver Alka $ // ---------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp
.cpp
2,102
70
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/GzipIfstream.cpp
.cpp
7,694
201
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/FLASHDeconvFeatureFile.cpp
.cpp
9,224
204
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Kyowon Jeong $ // $Authors: Kyowon Jeong $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/PercolatorOutfile.cpp
.cpp
12,162
337
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MascotXMLFile.cpp
.cpp
5,353
146
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Nico Pfeifer $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MS2File.cpp
.cpp
525
24
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MzTabBase.cpp
.cpp
16,702
888
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka $ // $Authors: Timo Sachsenberg, Oliver Alka $ // ---------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MSstatsFile.cpp
.cpp
31,372
749
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg, Lukas Heumos $ // ---------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/Bzip2InputStream.cpp
.cpp
1,464
58
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/TraMLFile.cpp
.cpp
1,712
59
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ConsensusXMLFile.cpp
.cpp
3,985
105
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Clemens Groepl, Marc Sturm, Mathias Walzer $ // ---------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/SVOutStream.cpp
.cpp
3,568
143
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MascotGenericFile.cpp
.cpp
18,445
469
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Andreas Bertsch, Chris Bielow $ // --------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/IBSpectraFile.cpp
.cpp
10,633
291
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Stephan Aiche $ // --------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/Bzip2Ifstream.cpp
.cpp
3,575
133
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MascotRemoteQuery.cpp
.cpp
32,417
825
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Andreas Bertsch, Daniel Jameson, Chris Bielow, Timo Sachsenberg $ /...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/Base64.cpp
.cpp
11,714
285
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Chris Bielow, Moritz Aubermann $ // ---------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MsInspectFile.cpp
.cpp
545
22
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/QcMLFile.cpp
.cpp
68,703
2,132
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer, Axel Walter $ // $Authors: Mathias Walzer $ // --------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/PepNovoInfile.cpp
.cpp
4,491
167
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MRMFeatureQCFile.cpp
.cpp
11,475
291
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Domen...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ParamJSONFile.cpp
.cpp
10,826
328
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Authors: Simon Gene Gottlieb $ // -------------------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp
.cpp
6,841
172
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Domen...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ControlledVocabulary.cpp
.cpp
22,219
677
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Andreas Bertsch, Mathias Walzer $ // -------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/FeatureXMLFile.cpp
.cpp
3,653
124
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow, Clemens Groepl $ // ---------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/PepNovoOutfile.cpp
.cpp
14,675
409
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Sandro Andreotti, Chris Bielow $ // ---------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DTAFile.cpp
.cpp
564
24
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/GzipInputStream.cpp
.cpp
1,492
58
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ChromeleonFile.cpp
.cpp
4,798
130
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Domen...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/SequestInfile.cpp
.cpp
35,245
922
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Martin Langwisch $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/GNPSMetaValueFile.cpp
.cpp
1,350
37
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Axel Walter $ // $Authors: Axel Walter $ // ---------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/XTandemXMLFile.cpp
.cpp
12,561
360
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/PepXMLFile.cpp
.cpp
87,937
2,184
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow, Hendrik Weisser $ // $Authors: Chris Bielow, Hendrik Weisser $ // ---------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MzTabFile.cpp
.cpp
125,556
3,339
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/SequestOutfile.cpp
.cpp
40,795
1,240
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Martin Langwisch $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/InspectOutfile.cpp
.cpp
43,387
1,306
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Martin Langwisch $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/OSWFile.cpp
.cpp
23,936
659
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: George Rosenberger $ // $Authors: George Rosenberger $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MSPFile.cpp
.cpp
17,921
491
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/XMLFile.cpp
.cpp
7,494
254
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/KroenikFile.cpp
.cpp
3,362
103
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/ParamCTDFile.cpp
.cpp
12,426
369
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Ruben Grünberg $ // $Authors: Ruben Grünberg $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/CVMappingFile.cpp
.cpp
6,016
220
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/XQuestResultXMLFile.cpp
.cpp
12,635
291
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Eugen Netz $ // $Authors: Lukas Zimmermann, Eugen Netz $ // -----------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MzMLFile.cpp
.cpp
8,735
277
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Chris Bielow, Hannes Roest $ // -------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DTA2DFile.cpp
.cpp
686
31
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/QuantmsIO.cpp
.cpp
37,447
944
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Julianus Pfeuffer $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MzDataFile.cpp
.cpp
2,055
79
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HDF5Connector.cpp
.cpp
1,481
55
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/FileTypes.cpp
.cpp
13,357
253
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Stephan Aiche, Andreas Bertsch, Marc Sturm, Chris Bielow $ // -...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp
.cpp
5,800
157
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp
.cpp
4,935
149
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp
.cpp
3,805
117
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp
.cpp
810
26
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp
.cpp
744
26
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp
.cpp
22,408
560
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Andreas Bertsch $ // ------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp
.cpp
6,740
315
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp
.cpp
2,430
117
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/MSNUMPRESS/MSNumpress.cpp
.cpp
18,906
861
/* MSNumpress.cpp johan.teleman@immun.lth.se This distribution goes under the BSD 3-clause license. If you prefer to use Apache version 2.0, that is also available at https://github.com/fickludd/ms-numpress Copyright (c) 2013, Johan Teleman All rights reserved. ...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp
.cpp
15,297
387
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp
.cpp
20,850
573
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp
.cpp
7,244
216
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp
.cpp
63,933
1,232
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Eugen Netz $ // $Authors: Lukas Zimmermann, Eugen Netz $ // -----------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp
.cpp
54,535
1,427
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp
.cpp
6,331
228
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp
.cpp
9,307
305
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp
.cpp
25,460
623
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp
.cpp
150,000
3,022
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Eugen Netz $ // $Authors: Mathias Walzer, Eugen Netz $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp
.cpp
70,733
1,746
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Andreas Bertsch, Hannes Roest $ // --------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp
.cpp
3,276
115
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp
.cpp
2,803
120
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Guillaume Belz $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/FidHandler.cpp
.cpp
1,317
59
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Guillaume Belz $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp
.cpp
13,311
389
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Stephan Aiche $ // --------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp
.cpp
100,099
2,267
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Authors: Mathias Walzer, Andreas Bertsch $ // ----------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp
.cpp
13,028
342
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp
.cpp
53,271
1,298
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Chris Bielow $ // ---------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp
.cpp
60,429
1,510
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp
.cpp
2,409
72
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp
.cpp
25,851
654
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Nico Pfeifer, Chris Bielow, Hendrik Weisser, Petra Gutenbrunner...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp
.cpp
19,790
570
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/FeatureXMLHandler.cpp
.cpp
39,440
1,115
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow, Clemens Groepl $ // ---------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/ConsensusXMLHandler.cpp
.cpp
36,826
973
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Clemens Groepl, Marc Sturm, Mathias Walzer $ // ---------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp
.cpp
265,546
5,753
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Chris Bielow, Hannes Roest $ // -------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp
.cpp
16,670
393
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka, Axel Walter $ // $Authors: Oliver Alka $ // --------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp
.cpp
5,748
176
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp
.cpp
2,412
91
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp
.cpp
1,830
68
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp
.cpp
446
15
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp
.cpp
1,663
63
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp
.cpp
494
16
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp
.cpp
2,881
80
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp
.cpp
1,212
45
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp
.cpp
2,203
69
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest, Chris Bielow $ // -----------------------------------...
C++