keyword
stringclasses
7 values
repo_name
stringlengths
8
98
file_path
stringlengths
4
244
file_extension
stringclasses
29 values
file_size
int64
0
84.1M
line_count
int64
0
1.6M
content
stringlengths
1
84.1M
language
stringclasses
14 values
3D
OpenMS/OpenMS
src/topp/MSGFPlusAdapter.cpp
.cpp
42,577
907
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Dilek Dere, Mathias Walzer, Petra Gutenbrunner, Hendrik Weisser,...
C++
3D
OpenMS/OpenMS
src/topp/MRMTransitionGroupPicker.cpp
.cpp
9,948
287
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/RNPxlXICFilter.cpp
.cpp
9,056
278
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/SpectraFilterNLargest.cpp
.cpp
3,906
135
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer$ // $Authors: $ // -------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/XMLValidator.cpp
.cpp
5,318
170
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/SageAdapter.cpp
.cpp
39,805
882
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenNuXL.cpp
.cpp
276,667
6,622
// Copyright (c) 2002-present, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/Decharger.cpp
.cpp
6,876
187
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/QualityControl.cpp
.cpp
24,332
585
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Tom Waschischeck $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FalseDiscoveryRate.cpp
.cpp
15,078
329
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg, Andreas Bertsch $ // ------------------------...
C++
3D
OpenMS/OpenMS
src/topp/ConsensusID.cpp
.cpp
43,901
929
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Sven Nahnsen, Hendrik Weisser $ // -----------------------------...
C++
3D
OpenMS/OpenMS
src/topp/SequenceCoverageCalculator.cpp
.cpp
10,364
271
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Nico Pfeifer, Chris Bielow $ // -----------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FeatureLinkerUnlabeledKD.cpp
.cpp
4,482
124
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Johannes Veit $ // $Authors: Johannes Veit $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FileConverter.cpp
.cpp
30,337
728
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Andreas Bertsch, Chris Bielow $ // --------------------...
C++
3D
OpenMS/OpenMS
src/topp/Resampler.cpp
.cpp
4,744
159
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/IsobaricWorkflow.cpp
.cpp
41,526
914
// Copyright (c) 2002-2023, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Julianus Pfeuffer $ // --------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MascotAdapterOnline.cpp
.cpp
16,574
469
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch, Daniel Jameson, Chris Bielow $ // ------------...
C++
3D
OpenMS/OpenMS
src/topp/PSMFeatureExtractor.cpp
.cpp
12,860
310
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Authors: Andreas Simon, Mathias Walzer, Matthew The $ // -----------------...
C++
3D
OpenMS/OpenMS
src/topp/QCImporter.cpp
.cpp
9,380
247
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Author: Mathias Walzer $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MetaboliteSpectralMatcher.cpp
.cpp
6,035
178
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Erhan Kenar $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/SpectraSTSearchAdapter.cpp
.cpp
14,957
332
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // ----------------------------------------- // $Maintainer: Lukas Zimmermann $ // $Authors: Lukas Zimmermann $ // --------------------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathDIAPreScoring.cpp
.cpp
5,947
162
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Witold Wolski $ // --------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/ClusterMassTraces.cpp
.cpp
4,938
156
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/IDPosteriorErrorProbability.cpp
.cpp
12,119
285
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FeatureLinkerUnlabeled.cpp
.cpp
12,905
338
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Clemens Groepl, Steffen Sass $ // -----------------...
C++
3D
OpenMS/OpenMS
src/topp/IDDecoyProbability.cpp
.cpp
6,159
179
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/RNADigestor.cpp
.cpp
5,535
158
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Nico Pfeiffer, Chris Bielow, Hendrik Weisser $ // --------------...
C++
3D
OpenMS/OpenMS
src/topp/MSstatsConverter.cpp
.cpp
9,059
209
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Lukas Zimmermann $ // $Authors: Lukas Zimmermann $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/NovorAdapter.cpp
.cpp
16,248
371
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka $ // $Authors: Oliver Alka $ // ---------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathChromatogramExtractor.cpp
.cpp
13,610
315
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/InternalCalibration.cpp
.cpp
18,946
374
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenPepXL.cpp
.cpp
13,430
278
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Eugen Netz $ // $Authors: Timo Sachsenberg, Eugen Netz $ // -----------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/PeakPickerIM.cpp
.cpp
10,908
307
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Author: Mohammed Alhigaylan $ // $Maintainer: Timo Sachsenberg $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/DecoyDatabase.cpp
.cpp
24,815
512
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Sven Nahnsen $ // $Authors: Sven Nahnsen, Andreas Bertsch, Chris Bielow, Philipp Wang $ // ----...
C++
3D
OpenMS/OpenMS
src/topp/OpenMSInfo.cpp
.cpp
6,181
178
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/DigestorMotif.cpp
.cpp
16,071
365
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Sven Nahnsen $ // $Author: Sven Nahnsen $ // --------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FeatureFinderMultiplex.cpp
.cpp
14,820
390
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Lars Nilse $ // $Authors: Lars Nilse, Timo Sachsenberg, Samuel Wein, Mathias Walzer $ // ------...
C++
3D
OpenMS/OpenMS
src/topp/PercolatorAdapter.cpp
.cpp
52,459
1,209
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Authors: Andreas Simon, Mathias Walzer, Matthew The $ // -----------------...
C++
3D
OpenMS/OpenMS
src/topp/LuciphorAdapter.cpp
.cpp
26,861
675
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Petra Gutenbrunner, Oliver Alka $ // $Authors: Petra Gutenbrunner $ // ------------------------...
C++
3D
OpenMS/OpenMS
src/topp/ConsensusMapNormalizer.cpp
.cpp
7,332
150
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Lars Nilse $ // $Authors: Hendrik Brauer, Oliver Kohlbacher, Johannes Junker $ // -------------...
C++
3D
OpenMS/OpenMS
src/topp/DeMeanderize.cpp
.cpp
6,844
216
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MSFraggerAdapter.cpp
.cpp
62,002
1,078
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Lukas Zimmermann $ // $Authors: Lukas Zimmermann, Leon Bichmann $ // --------------------------...
C++
3D
OpenMS/OpenMS
src/topp/NucleicAcidSearchEngine.cpp
.cpp
59,292
1,439
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg, Samuel Wein, Hendrik Weisser $ // -----------...
C++
3D
OpenMS/OpenMS
src/topp/Epifany.cpp
.cpp
19,574
474
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Julianus Pfeuffer $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MapAlignerPoseClustering.cpp
.cpp
11,239
307
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Clemens Groepl, Chris Bielow $ // ---------------------...
C++
3D
OpenMS/OpenMS
src/topp/SpectraFilterThresholdMower.cpp
.cpp
3,932
135
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer$ // $Authors: $ // -------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathRewriteToFeatureXML.cpp
.cpp
6,443
209
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/IDFilter.cpp
.cpp
40,813
868
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Nico Pfeifer, Chris Bielow, Hendrik Weisser $ // ------------------...
C++
3D
OpenMS/OpenMS
src/topp/QuantmsIOConverter.cpp
.cpp
5,319
147
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka $ // $Authors: Oliver Alka $ // ---------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MaRaClusterAdapter.cpp
.cpp
18,793
492
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Leon Bichmann $ // $Authors: Mathew The, Leon Bichmann $ // -----------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathAssayGenerator.cpp
.cpp
21,038
437
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: George Rosenberger $ // $Authors: George Rosenberger $ // -------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/CometAdapter.cpp
.cpp
47,403
829
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Leon Bichmann, Timo Sachsenberg $ // ------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MzTabExporter.cpp
.cpp
7,558
218
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/TextExporter.cpp
.cpp
62,617
1,562
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: $ // $Authors: Clemens Groepl, Andreas Bertsch, Chris Bielow, Marc Sturm, Hendrik Weisser $ //...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathAnalyzer.cpp
.cpp
10,907
276
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathWorkflow.cpp
.cpp
68,746
1,364
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/SpectraFilterNormalizer.cpp
.cpp
3,665
130
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer$ // $Authors: $ // -------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/PeakPickerIterative.cpp
.cpp
3,604
123
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/MapAlignerTreeGuided.cpp
.cpp
11,260
250
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julia Thueringer $ // $Authors: Julia Thueringer $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/BaselineFilter.cpp
.cpp
6,098
164
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/INIUpdater.cpp
.cpp
12,754
399
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/NoiseFilterSGolay.cpp
.cpp
7,632
235
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Eva Lange $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/OpenSwathRTNormalizer.cpp
.cpp
14,276
304
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest, George Rosenberger $ // $Authors: Hannes Roest, George Rosenberger $ // --------...
C++
3D
OpenMS/OpenMS
src/topp/OpenMSDatabasesInfo.cpp
.cpp
2,518
80
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Julianus Pfeuffer $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/DatabaseFilter.cpp
.cpp
5,768
169
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka $ // $Authors: Oliver Alka $ // ---------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/AssayGeneratorMetabo.cpp
.cpp
22,417
458
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka, Axel Walter $ // $Authors: Oliver Alka $ // --------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FileMerger.cpp
.cpp
20,583
550
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow, Hendrik Weisser $ // --------------------...
C++
3D
OpenMS/OpenMS
src/topp/SpectraMerger.cpp
.cpp
5,523
177
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow, Andreas Bertsch, Lars Nilse $ // --------------------...
C++
3D
OpenMS/OpenMS
src/topp/SemanticValidator.cpp
.cpp
4,677
141
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Andreas Bertsch $ // ------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/QCShrinker.cpp
.cpp
5,524
155
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Author: Mathias Walzer $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/FeatureFinderIdentification.cpp
.cpp
14,339
289
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/SeedListGenerator.cpp
.cpp
9,177
205
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/ExternalCalibration.cpp
.cpp
5,059
152
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/topp/TriqlerConverter.cpp
.cpp
6,247
164
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/Plot2DCanvas.h
.h
9,166
263
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/LayerDataConsensus.h
.h
2,686
87
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h
.h
1,423
51
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h
.h
2,488
97
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h
.h
14,872
356
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Johannes Veit $ // $Authors: Johannes Junker, Chris Bielow $ // -------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h
.h
6,718
214
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm, Chris Bielow $ // ---------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h
.h
2,878
121
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/TreeView.h
.h
1,705
54
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/DIATreeTab.h
.h
2,902
90
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/Painter2DBase.h
.h
8,064
249
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/SequenceVisualizer.h
.h
1,580
65
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Dhanmoni Nath, Julianus Pfeuffer $ // ------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h
.h
1,675
65
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Johannes Veit $ // $Authors: Johannes Junker $ // ---------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h
.h
6,709
192
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h
.h
1,406
64
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/Plot1DCanvas.h
.h
27,189
757
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm, Timo Sachsenberg, Chris Bielow $ // ----------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/PainterBase.h
.h
2,902
81
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/TVIdentificationViewController.h
.h
4,114
107
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Timo Sachsenberg $ // ------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h
.h
1,778
60
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/Plot2DWidget.h
.h
5,143
147
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/Painter1DBase.h
.h
3,080
101
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h
.h
2,566
82
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // -----------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/ListEditor.h
.h
4,530
159
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar $ // ---------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/LayerDataBase.h
.h
19,006
463
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/PlotCanvas.h
.h
31,065
935
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/TOPPViewMenu.h
.h
3,879
111
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h
.h
2,459
82
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Johannes Veit $ // $Authors: Johannes Junker, Chris Bielow $ // -------------------------------...
Unknown