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Code Sample 1: public static boolean isSameHttpContent(final String url, final File localFile, UsernamePasswordCredentials creds) throws IOException { if (localFile.isFile()) { long localContentLength = localFile.length(); long localLastModified = localFile.lastModified() / 1000; long contentLength = -1; long lastModif...
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Code Sample 1: @Override protected void doGet(HttpServletRequest req, HttpServletResponse resp) throws ServletException, IOException { String contentType = req.getParameter("type"); String arg = req.getParameter("file"); if (arg == null) { resp.sendError(404, "Missing File Arg"); return; } File f = new File(arg); if (!...
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Code Sample 1: public void testHttpPostsWithExpectContinue() throws Exception { int reqNo = 20; Random rnd = new Random(); List testData = new ArrayList(reqNo); for (int i = 0; i < reqNo; i++) { int size = rnd.nextInt(5000); byte[] data = new byte[size]; rnd.nextBytes(data); testData.add(data); } this.server.registerHa...
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Code Sample 1: public static final String enctrypt(String password) { MessageDigest md = null; byte[] byteHash = null; StringBuffer resultString = new StringBuffer(); try { md = MessageDigest.getInstance("SHA1"); } catch (NoSuchAlgorithmException e) { System.out.println("NoSuchAlgorithmException caught!"); throw new Ru...
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Code Sample 1: public File extractID3v2TagDataIntoFile(File outputFile) throws TagNotFoundException, IOException { int startByte = (int) ((MP3AudioHeader) audioHeader).getMp3StartByte(); if (startByte >= 0) { FileInputStream fis = new FileInputStream(file); FileChannel fc = fis.getChannel(); ByteBuffer bb = ByteBuffer....
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Code Sample 1: public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFo...
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Code Sample 1: private static String retrieveVersion(InputStream is) throws RepositoryException { ByteArrayOutputStream buffer = new ByteArrayOutputStream(); try { IOUtils.copy(is, buffer); } catch (IOException e) { throw new RepositoryException(exceptionLocalizer.format("device-repository-file-missing", DeviceReposito...
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Code Sample 1: public static String encodeByMd5(String str) { try { if (str == null) { str = ""; } MessageDigest md5 = MessageDigest.getInstance("MD5"); md5.update(str.getBytes("utf-8")); byte[] b = md5.digest(); int i; StringBuffer buff = new StringBuffer(""); for (int offset = 0; offset < b.length; offset++) { i = b[...
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Code Sample 1: public void copyFile(File sourceFile, String toDir, boolean create, boolean overwrite) throws FileNotFoundException, IOException { FileInputStream source = null; FileOutputStream destination = null; byte[] buffer; int bytes_read; File toFile = new File(toDir); if (create && !toFile.exists()) toFile.mkdir...
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Code Sample 1: @Override public Collection<IAuthor> doImport() throws Exception { progress.initialize(2, "Ściągam autorów amerykańskich"); String url = "http://pl.wikipedia.org/wiki/Kategoria:Ameryka%C5%84scy_autorzy_fantastyki"; UrlResource resource = new UrlResource(url); InputStream urlInputStream = resource.getInpu...
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Code Sample 1: private static URL downloadFile(URL url, File destFile) throws Exception { try { URLConnection urlConnection = url.openConnection(); File tmpFile = null; try { tmpFile = File.createTempFile("remoteLib_", null); InputStream in = null; FileOutputStream out = null; try { in = urlConnection.getInputStream();...
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Code Sample 1: private static void backupFile(File file) { FileChannel in = null, out = null; try { if (!file.getName().endsWith(".bak")) { in = new FileInputStream(file).getChannel(); out = new FileOutputStream(new File(file.toString() + ".bak")).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileC...
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Code Sample 1: public void writeTo(File f) throws IOException { if (state != STATE_OK) throw new IllegalStateException("Upload failed"); if (tempLocation == null) throw new IllegalStateException("File already saved"); if (f.isDirectory()) f = new File(f, filename); FileInputStream fis = new FileInputStream(tempLocation...
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Code Sample 1: public static void copy(File source, File destination) { try { FileInputStream fileInputStream = new FileInputStream(source); FileOutputStream fileOutputStream = new FileOutputStream(destination); FileChannel inputChannel = fileInputStream.getChannel(); FileChannel outputChannel = fileOutputStream.getCha...
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Code Sample 1: @SuppressWarnings("unchecked") protected void processTransformAction(HttpServletRequest request, HttpServletResponse response, String action) throws Exception { File transformationFile = null; String tr = request.getParameter(Definitions.REQUEST_PARAMNAME_XSLT); if (StringUtils.isNotBlank(tr)) { transfor...
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Code Sample 1: public synchronized String encrypt(String plaintext) { if (plaintext == null || plaintext.equals("")) { return plaintext; } String hash = null; MessageDigest md = null; try { md = MessageDigest.getInstance("SHA"); } catch (NoSuchAlgorithmException e) { throw new RuntimeException(e.getMessage()); } try { ...
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Code Sample 1: public static String getImportFileBody(String fileName, HttpSession session) { FTPClient ftp = new FTPClient(); CofaxToolsUser user = (CofaxToolsUser) session.getAttribute("user"); String fileTransferFolder = CofaxToolsServlet.fileTransferFolder; String importFTPServer = (String) user.workingPubConfigEle...
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Code Sample 1: private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance...
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Code Sample 1: public ActionForward saveImageMap(ActionMapping mapping, ActionForm form, HttpServletRequest request, HttpServletResponse response) throws Exception { log.debug("MapAction saveImageMap()"); String imageURL = RequestUtil.getRequest(request, "imgUrl"); DataInputStream di = null; FileOutputStream fo = null;...
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Code Sample 1: private String endcodePassword(String password) throws UnsupportedEncodingException, NoSuchAlgorithmException { MessageDigest md = MessageDigest.getInstance("SHA"); md.update(password.getBytes("UTF-8")); byte raw[] = md.digest(); Base64 base64 = new Base64(); String hash = new String(base64.encode(raw));...
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Code Sample 1: public static void main(String[] args) throws Exception { File rootDir = new File("C:\\dev\\workspace_fgd\\gouvqc_crggid\\WebContent\\WEB-INF\\upload"); File storeDir = new File(rootDir, "storeDir"); File workDir = new File(rootDir, "workDir"); LoggerFacade loggerFacade = new CommonsLoggingLogger(logger)...
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Code Sample 1: private boolean writeResource(PluginProxy eclipseInstallPlugin, ResourceProxy translation, LocaleProxy locale) throws Exception { String translationResourceName = determineTranslatedResourceName(translation, locale); String pluginNameInDirFormat = eclipseInstallPlugin.getName().replace(Messages.getString...
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Code Sample 1: private CachedQuery loadQuery(String path) throws CacheException, IOException, XQueryException { final URL url; final long lastModified; final InputStream is; try { url = getServletContext().getResource(path); assert (url != null); lastModified = url.openConnection().getLastModified(); is = url.openStrea...
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Code Sample 1: private byte[] hash(String data, HashAlg alg) { try { MessageDigest digest = MessageDigest.getInstance(alg.toString()); digest.update(data.getBytes()); byte[] hash = digest.digest(); return hash; } catch (NoSuchAlgorithmException e) { } return null; } Code Sample 2: public boolean authenticate(String us...
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Code Sample 1: public static String CreateHash(String s) { String str = s.toString(); if (str == null || str.length() == 0) { throw new IllegalArgumentException("String cannot be null or empty"); } StringBuffer hexString = new StringBuffer(); try { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(str.getB...
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Code Sample 1: public static void zip(String destination, String folder) { File fdir = new File(folder); File[] files = fdir.listFiles(); PrintWriter stdout = new PrintWriter(System.out, true); int read = 0; FileInputStream in; byte[] data = new byte[1024]; try { ZipOutputStream out = new ZipOutputStream(new FileOutput...
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Code Sample 1: private void zip(FileHolder fileHolder, int zipCompressionLevel) { byte[] buffer = new byte[BUFFER_SIZE]; int bytes_read; if (fileHolder.selectedFileList.size() == 0) { return; } File zipDestFile = new File(fileHolder.destFiles[0]); try { ZipOutputStream outStream = new ZipOutputStream(new FileOutputStre...
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Code Sample 1: public static void copyFiles(String strPath, String dstPath) throws IOException { File src = new File(strPath); File dest = new File(dstPath); if (src.isDirectory()) { dest.mkdirs(); String list[] = src.list(); for (int i = 0; i < list.length; i++) { String dest1 = dest.getAbsolutePath() + File.separator...
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Code Sample 1: private static void init() { try { ClassLoader cl = Thread.currentThread().getContextClassLoader(); Enumeration<URL> enumeration = cl.getResources("extension-services.properties"); do { if (!enumeration.hasMoreElements()) break; URL url = (URL) enumeration.nextElement(); System.out.println(" - " + url); ...
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Code Sample 1: public void copyFileFromLocalMachineToRemoteMachine(InputStream source, File destination) throws Exception { String fileName = destination.getPath(); File f = new File(getFtpServerHome(), "" + System.currentTimeMillis()); f.deleteOnExit(); org.apache.commons.io.IOUtils.copy(source, new FileOutputStream(f...
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Code Sample 1: public boolean check(int timeout) { StringBuilder result = null; java.net.URL url; java.io.InputStream in = null; try { url = new java.net.URL(location + "/prisms?method=test"); java.net.URLConnection conn = url.openConnection(); conn.setConnectTimeout(timeout); in = conn.getInputStream(); java.io.Reader...
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Code Sample 1: private void fetchAvailable(ProgressObserver po) { if (po == null) throw new IllegalArgumentException("the progress observer can't be null"); if (availables == null) availables = new ArrayList<Dictionary>(); else availables.clear(); if (installed == null) initInstalled(); File home = SpellCheckPlugin.get...
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Code Sample 1: public void run() { try { if (netLoadAccount.loginsuccessful) { host = netLoadAccount.username + " | Netload.in"; } else { host = "Netload.in"; } status = UploadStatus.INITIALISING; initialize(); HttpClient httpclient = new DefaultHttpClient(); HttpPost httppost = new HttpPost(postURL); if (netLoadAccoun...
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Code Sample 1: public void initialize(AtomPropsMenu menu) { propertiesMenu = menu; if (shieldings == null) { try { URL url = this.getClass().getClassLoader().getResource(RF); InputStreamReader isr = new InputStreamReader(url.openStream()); BufferedReader br = new BufferedReader(isr); SharcReader sr1 = new SharcReader(b...
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Code Sample 1: private Document getXMLDoc(Region region) { Document doc; try { InputStream stream; URL url = new URL("http://eve-central.com/api/marketstat?hours=" + HOURS + "&" + getTypes() + "&regionlimit=" + region.getTypeID()); System.out.println(url.toString()); stream = url.openStream(); DocumentBuilderFactory fa...
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Code Sample 1: public static void proxyRequest(IPageContext context, Writer writer, String proxyPath) throws IOException { URLConnection connection = new URL(proxyPath).openConnection(); connection.setDoInput(true); connection.setDoOutput(false); connection.setUseCaches(false); connection.setRequestProperty("Content-Ty...
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Code Sample 1: protected void shutdown(final boolean unexpected) { ControlerState oldState = this.state; this.state = ControlerState.Shutdown; if (oldState == ControlerState.Running) { if (unexpected) { log.warn("S H U T D O W N --- received unexpected shutdown request."); } else { log.info("S H U T D O W N --- start r...
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Code Sample 1: public static boolean copyFile(File soureFile, File destFile) { boolean copySuccess = false; if (soureFile != null && destFile != null && soureFile.exists()) { try { new File(destFile.getParent()).mkdirs(); BufferedOutputStream out = new BufferedOutputStream(new FileOutputStream(destFile)); BufferedInput...
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Code Sample 1: public In(String s) { try { File file = new File(s); if (file.exists()) { scanner = new Scanner(file, charsetName); scanner.useLocale(usLocale); return; } URL url = getClass().getResource(s); if (url == null) { url = new URL(s); } URLConnection site = url.openConnection(); InputStream is = site.getInputS...
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Code Sample 1: public static void _he3Decode(String in_file) { try { File out = new File(in_file + dec_extension); File in = new File(in_file); int file_size = (int) in.length(); FileInputStream in_stream = new FileInputStream(in_file); out.createNewFile(); FileOutputStream out_stream = new FileOutputStream(out.getName...
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Code Sample 1: private void load(Runestone stone) throws RunesExceptionRuneExecution, RunesExceptionNoSuchContent { final Tokeniser tokeniser = stone.<Tokeniser>getContent("tokeniser").iterator().next(); rules = new HashMap<Node, List<GazRule>>(); System.out.println("Loading Gaz from: " + _url); if (_url == null) retur...
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Code Sample 1: private void copyPhoto(final IPhoto photo, final Map.Entry<String, Integer> size) { final File fileIn = new File(storageService.getPhotoPath(photo, storageService.getOriginalDir())); final File fileOut = new File(storageService.getPhotoPath(photo, size.getKey())); InputStream fileInputStream; OutputStrea...
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Code Sample 1: private void createJarArchive(File archiveFile, List<File> filesToBeJared, File base) throws Exception { FileOutputStream stream = new FileOutputStream(archiveFile); JarOutputStream out = new JarOutputStream(stream); for (File tobeJared : filesToBeJared) { if (tobeJared == null || !tobeJared.exists() || ...
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Code Sample 1: private Collection<URL> doSearch(final URL url) throws IOException { final Collection<URL> result = new ArrayList<URL>(); final InputStream is = url.openStream(); final ReadHTML parse = new ReadHTML(is); final StringBuilder buffer = new StringBuilder(); boolean capture = false; int ch; while ((ch = parse...
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Code Sample 1: protected BufferedImage handleICCException() { if (params.uri.startsWith("http://vacani.icc.cat") || params.uri.startsWith("http://louisdl.louislibraries.org")) try { params.uri = params.uri.replace("cdm4/item_viewer.php", "cgi-bin/getimage.exe") + "&DMSCALE=3"; params.uri = params.uri.replace("/u?", "cg...
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Code Sample 1: public synchronized List<AnidbSearchResult> getAnimeTitles() throws Exception { URL url = new URL("http", host, "/api/animetitles.dat.gz"); ResultCache cache = getCache(); @SuppressWarnings("unchecked") List<AnidbSearchResult> anime = (List) cache.getSearchResult(null, Locale.ROOT); if (anime != null) { ...
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Code Sample 1: public static String readRss(String feed, int num) { InputStream stream = null; try { feed = appendParam(feed, "num", "" + num); System.out.println("feed=" + feed); URL url = new URL(feed); URLConnection connection = url.openConnection(); connection.setRequestProperty("User-Agent", RSS_USER_AGENT); strea...
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Code Sample 1: private Document saveFile(Document document, File file) throws Exception { List<Preference> preferences = prefService.findAll(); if (preferences != null && !preferences.isEmpty()) { preference = preferences.get(0); } SimpleDateFormat sdf = new SimpleDateFormat(Constants.DATEFORMAT_YYYYMMDD); String repo ...
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Code Sample 1: public static void Sample2(String myField, String condition1, String condition2) throws SQLException { Connection connection = DriverManager.getConnection("jdbc:postgresql://localhost/test", "user", "password"); connection.setAutoCommit(false); Statement st = connection.createStatement(); String sql = "U...
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Code Sample 1: public static void main(String args[]) throws Exception { FileInputStream fin = new FileInputStream("D:/work/test.txt"); FileOutputStream fout = new FileOutputStream("D:/work/output.txt"); FileChannel inChannel = fin.getChannel(); FileChannel outChannel = fout.getChannel(); ByteBuffer buffer = ByteBuffer...
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Code Sample 1: @Override public EntrySet read(EntrySet set) throws ReadFailedException { if (!SourceCache.contains(url)) { SSL.certify(url); try { super.setParser(Parser.detectParser(url.openStream(), url)); final PipedInputStream in = new PipedInputStream(); final PipedOutputStream forParser = new PipedOutputStream(in...
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Code Sample 1: private Map<String, DomAttr> getAttributesFor(final BaseFrame frame) throws IOException { final Map<String, DomAttr> map = createAttributesCopyWithClonedAttribute(frame, "src"); final DomAttr srcAttr = map.get("src"); if (srcAttr == null) { return map; } final Page enclosedPage = frame.getEnclosedPage();...
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Code Sample 1: public void readMESHDescriptorFileIntoFiles(String outfiledir) { String inputLine, ins; String filename = getMESHdescriptorfilename(); String uid = ""; String name = ""; String description = ""; String element_of = ""; Vector treenr = new Vector(); Vector related = new Vector(); Vector synonyms = new Vec...
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Code Sample 1: protected URL[][] getImageLinks(final URL url) { Lexer lexer; URL[][] ret; if (null != url) { try { lexer = new Lexer(url.openConnection()); ret = extractImageLinks(lexer, url); } catch (Throwable t) { System.out.println(t.getMessage()); ret = NONE; } } else ret = NONE; return (ret); } Code Sample 2: pu...
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Code Sample 1: private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance...
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Code Sample 1: public static void doVersionCheck(View view) { view.showWaitCursor(); try { URL url = new URL(jEdit.getProperty("version-check.url")); InputStream in = url.openStream(); BufferedReader bin = new BufferedReader(new InputStreamReader(in)); String line; String version = null; String build = null; while ((li...
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Code Sample 1: private static String getDigestPassword(String streamId, String password) { MessageDigest md = null; try { md = MessageDigest.getInstance("SHA"); } catch (NoSuchAlgorithmException e) { throw (RuntimeException) new IllegalStateException().initCause(e); } md.update((streamId + password).getBytes()); byte[]...
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Code Sample 1: void shutdown(final boolean unexpected) { if (unexpected) { log.warn("S H U T D O W N --- received unexpected shutdown request."); } else { log.info("S H U T D O W N --- start regular shutdown."); } if (this.uncaughtException != null) { log.warn("Shutdown probably caused by the following Exception.", thi...
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Code Sample 1: public ProgramMessageSymbol deleteProgramMessageSymbol(int id) throws AdaptationException { ProgramMessageSymbol pmt = null; Connection connection = null; Statement statement = null; ResultSet resultSet = null; try { String query = "SELECT * FROM ProgramMessageSymbols " + "WHERE id = " + id; connection =...
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Code Sample 1: public static void kopirujSoubor(File vstup, File vystup) throws IOException { FileChannel sourceChannel = new FileInputStream(vstup).getChannel(); FileChannel destinationChannel = new FileOutputStream(vystup).getChannel(); sourceChannel.transferTo(0, sourceChannel.size(), destinationChannel); sourceChan...
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Code Sample 1: public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.Buffer...
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Code Sample 1: private void work(String[] args) throws Exception { String dictLocation = CONTENT_URL; String cpeContentDirName = CONTENT_DIR; String fn = dictLocation.substring(dictLocation.lastIndexOf("/") + 1); File destFile = new File(cpeContentDirName + File.separator + fn); URL url = new URL(dictLocation); URLConn...
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Code Sample 1: public Controller(String m_hostname, String team, boolean m_shouldexit) throws InternalException { m_received_messages = new ConcurrentLinkedQueue<ReceivedMessage>(); m_fragmsgs = new ArrayList<String>(); m_customizedtaunts = new HashMap<Integer, String>(); m_nethandler = new CachingNetHandler(); m_drawi...
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Code Sample 1: public static void main(String[] args) { String inFile = "test_data/blobs.png"; String outFile = "ReadWriteTest.png"; itkImageFileReaderUC2_Pointer reader = itkImageFileReaderUC2.itkImageFileReaderUC2_New(); itkImageFileWriterUC2_Pointer writer = itkImageFileWriterUC2.itkImageFileWriterUC2_New(); reader....
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Code Sample 1: public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFo...
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Code Sample 1: public synchronized String encrypt(String password) { try { MessageDigest md = null; md = MessageDigest.getInstance("SHA-1"); md.update(password.getBytes("UTF-8")); byte raw[] = md.digest(); byte[] hash = (new Base64()).encode(raw); return new String(hash); } catch (NoSuchAlgorithmException e) { System.o...
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Code Sample 1: private void simulate() throws Exception { BufferedWriter out = null; out = new BufferedWriter(new FileWriter(outFile)); out.write("#Thread\tReputation\tAction\n"); out.flush(); System.out.println("Simulate..."); File file = new File(trsDemoSimulationfile); ObtainUserReputation obtainUserReputationReques...
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Code Sample 1: public void close() { try { if (writer != null) { BufferedReader reader; writer.close(); writer = new BufferedWriter(new FileWriter(fileName)); for (int i = 0; i < headers.size(); i++) writer.write(headers.get(i) + ","); writer.write("\n"); reader = new BufferedReader(new FileReader(file)); while (reader...
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Code Sample 1: public SOCTradeOffer makeOffer(SOCPossiblePiece targetPiece) { D.ebugPrintln("***** MAKE OFFER *****"); if (targetPiece == null) { return null; } SOCTradeOffer offer = null; SOCResourceSet targetResources = null; switch(targetPiece.getType()) { case SOCPossiblePiece.CARD: targetResources = SOCGame.CARD_S...
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Code Sample 1: public static void main(String[] args) throws IOException { File inputFile = new File("D:/farrago.txt"); File outputFile = new File("D:/outagain.txt"); FileReader in = new FileReader(inputFile); FileWriter out = new FileWriter(outputFile); int c; while ((c = in.read()) != -1) out.write(c); in.close(); ou...
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Code Sample 1: public void write(HttpServletRequest req, HttpServletResponse res, Object bean) throws IntrospectionException, IllegalAccessException, NoSuchMethodException, InvocationTargetException, IOException { res.setContentType(contentType); final Object r; if (HttpRpcServer.HttpRpcOutput.class.isAssignableFrom(be...
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Code Sample 1: public boolean setDeleteCliente(int IDcliente) { boolean delete = false; try { stm = conexion.prepareStatement("delete clientes where IDcliente='" + IDcliente + "'"); stm.executeUpdate(); conexion.commit(); delete = true; } catch (SQLException e) { System.out.println("Error en la eliminacion del registro...
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Code Sample 1: public void saveProjectFile(File aFile) { SimpleDateFormat sdf = new SimpleDateFormat("yyMMddHHmmss"); File destDir = new File(theProjectsDirectory, sdf.format(Calendar.getInstance().getTime())); if (destDir.mkdirs()) { File outFile = new File(destDir, "project.xml"); try { FileChannel sourceChannel = ne...
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Code Sample 1: public static void main(String arg[]) { try { String readFile = arg[0]; String writeFile = arg[1]; java.io.FileInputStream ss = new java.io.FileInputStream(readFile); ManagedMemoryDataSource ms = new ManagedMemoryDataSource(ss, 1024 * 1024, "foo/data", true); javax.activation.DataHandler dh = new javax.a...
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Code Sample 1: @Override public void run() { long timeout = 10 * 1000L; long start = (new Date()).getTime(); try { InputStream is = socket.getInputStream(); boolean available = false; while (!available && !socket.isClosed()) { try { if (is.available() != 0) { available = true; } else { Thread.sleep(100); } } catch (Exc...
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Code Sample 1: public static String md5EncodeString(String s) throws UnsupportedEncodingException, NoSuchAlgorithmException { if (s == null) return null; if (StringUtils.isBlank(s)) return ""; MessageDigest algorithm = MessageDigest.getInstance("MD5"); algorithm.reset(); algorithm.update(s.getBytes("UTF-8")); byte mess...
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Code Sample 1: public static String[] retrieveFasta(String id) throws Exception { URL url = new URL("http://www.uniprot.org/uniprot/" + id + ".fasta"); BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); String header = reader.readLine(); StringBuffer seq = new StringBuffer(); String li...
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Code Sample 1: private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance...
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Code Sample 1: private void generateArchetype(final IProject project, final IDataModel model, final IProgressMonitor monitor, final boolean offline) throws CoreException, InterruptedException, IOException { if (getArchetypeArtifactId(model) != null) { final Properties properties = new Properties(); properties.put("arch...
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Code Sample 1: public static String hashString(String sPassword) { if (sPassword == null || sPassword.equals("")) { return "empty:"; } else { try { MessageDigest md = MessageDigest.getInstance("SHA-1"); md.update(sPassword.getBytes("UTF-8")); byte[] res = md.digest(); return "sha1:" + byte2hex(res); } catch (NoSuchAlgo...
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Code Sample 1: private byte[] _generate() throws NoSuchAlgorithmException { if (host == null) { try { seed = InetAddress.getLocalHost().toString(); } catch (UnknownHostException e) { seed = "localhost/127.0.0.1"; } catch (SecurityException e) { seed = "localhost/127.0.0.1"; } host = seed; } else { seed = host; } seed =...
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Code Sample 1: public static String encryptMd5(String plaintext) { String hashtext = ""; try { MessageDigest m; m = MessageDigest.getInstance("MD5"); m.reset(); m.update(plaintext.getBytes()); byte[] digest = m.digest(); BigInteger bigInt = new BigInteger(1, digest); hashtext = bigInt.toString(16); while (hashtext.leng...
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Code Sample 1: public void generateReport(AllTestsResult atr, AllConvsResult acr, File nwbConvGraph) { ConvResult[] convs = acr.getConvResults(); BufferedReader reader = null; BufferedWriter writer = null; try { reader = new BufferedReader(new FileReader(nwbConvGraph)); writer = new BufferedWriter(new FileWriter(this.a...
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Code Sample 1: public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFo...
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Code Sample 1: public void updateDb(int scriptNumber) throws SQLException, IOException { String pathName = updatesPackage.replace(".", "/"); InputStream in = getClass().getClassLoader().getResourceAsStream(pathName + "/" + scriptNumber + ".sql"); ByteArrayOutputStream out = new ByteArrayOutputStream(); IOUtils.copy(in,...
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Code Sample 1: private static String completeGet(String encodedURLStr) throws IOException { URL url = new URL(encodedURLStr); HttpURLConnection connection = initConnection(url); String result = getReply(url.openStream()); connection.disconnect(); return result; } Code Sample 2: public String getpage(String leurl) thro...
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Code Sample 1: @HttpAction(name = "map.saveOrUpdate", method = { HttpAction.Method.post }, responseType = "text/plain") @HttpAuthentication(method = { HttpAuthentication.Method.WSSE }) public String saveOrUpdate(FileItem file, User user, MapOriginal map) throws HttpRpcException { File tmpFile; GenericDAO<MapOriginal> m...
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Code Sample 1: public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFo...
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Code Sample 1: private static String hashWithDigest(String in, String digest) { try { MessageDigest Digester = MessageDigest.getInstance(digest); Digester.update(in.getBytes("UTF-8"), 0, in.length()); byte[] sha1Hash = Digester.digest(); return toSimpleHexString(sha1Hash); } catch (NoSuchAlgorithmException ex) { throw ...
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Code Sample 1: public static boolean copy(File source, File dest) { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); if (in ...
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Code Sample 1: public static void decompressFile(File f) throws IOException { File target = new File(f.toString().substring(0, f.toString().length() - 3)); System.out.print("Decompressing: " + f.getName() + ".. "); long initialSize = f.length(); GZIPInputStream in = new GZIPInputStream(new FileInputStream(f)); FileOutp...
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Code Sample 1: private boolean doStudentCreditUpdate(Double dblCAmnt, String stuID) throws Exception { Connection conn = null; Statement stmt = null; ResultSet rs = null; Boolean blOk = false; String strMessage = ""; try { conn = dbMan.getPOSConnection(); conn.setAutoCommit(false); stmt = conn.createStatement(); String...
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Code Sample 1: public static void copy(File source, File dest) throws IOException { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.wri...
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Code Sample 1: public File getFile(String file) { DirProperties dp; List files = new ArrayList(); for (int i = 0; i < locs.size(); i++) { dp = (DirProperties) locs.get(i); if (dp.isReadable()) { File g = new File(dp.getLocation() + slash() + file); if (g.exists()) files.add(g); } } if (files.size() == 0) { throw new Un...
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Code Sample 1: public boolean renameTo(Folder f) throws MessagingException, StoreClosedException, NullPointerException { String[] aLabels = new String[] { "en", "es", "fr", "de", "it", "pt", "ca", "ja", "cn", "tw", "fi", "ru", "pl", "nl", "xx" }; PreparedStatement oUpdt = null; if (!((DBStore) getStore()).isConnected()...
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Code Sample 1: private void processAlignmentsFromAlignmentSource(String name, Alignment reference, String alignmentSource) throws AlignmentParserException, IllegalArgumentException, KADMOSCMDException, IOException { if (alignmentSource == null) throw new IllegalArgumentException("alignmentSource is null"); URL url; Str...
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Code Sample 1: static String fetchURLComposeExternPackageList(String urlpath, String pkglisturlpath) { String link = pkglisturlpath + "package-list"; try { boolean relative = isRelativePath(urlpath); readPackageList((new URL(link)).openStream(), urlpath, relative); } catch (MalformedURLException exc) { return getText("...
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Code Sample 1: private String transferWSDL(String usernameAndPassword) throws WiseConnectionException { String filePath = null; try { URL endpoint = new URL(wsdlURL); HttpURLConnection conn = (HttpURLConnection) endpoint.openConnection(); conn.setDoOutput(false); conn.setDoInput(true); conn.setUseCaches(false); conn.se...
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Code Sample 1: private String SHA1(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("SHA-1"); byte[] sha1hash = new byte[40]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); sha1hash = md.digest(); return convertToHex(sha1hash); } C...
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Code Sample 1: public static String getEncodedHex(String text) { MessageDigest md = null; String encodedString = null; try { md = MessageDigest.getInstance("MD5"); md.update(text.getBytes()); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } Hex hex = new Hex(); encodedString = new String(hex.encode(md.dige...