text stringlengths 1 927k |
|---|
import pandas as pd
from taxonomic import ncbi
n = ncbi.NCBI()
taxonomic = pd.read_table('/g/bork1/coelho/DD_DeCaF/genecats.cold/GMGC10.taxonomic.map', index_col=0, engine='c')
species = pd.read_table('/g/bork1/coelho/DD_DeCaF/genecats.cold/GMGC10.species.match.map', header=None, usecols=[1,2], index_col=0, squeeze=Tr... |
# Copyright (c) 2020, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by appli... |
import asyncio
import logging
log = logging.getLogger(__name__)
class Inbound:
def __init__(self, loop, settings):
self.loop = loop
self.settings = settings
self.inbox = asyncio.Queue(loop=self.loop)
self.stop_event = asyncio.Event()
def stop(self):
self.stop_event.se... |
# coding=utf-8
# Copyright (c) 2020, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless re... |
from .function_arg_capture import capture_args
from .serializable import Serializable
__all__ = ["capture_args", "Serializable"] |
#!/usr/bin/env python3
# This script updates icons from the SVG file
import os
import subprocess
import sys
BASEDIR = os.path.abspath(os.path.dirname(__file__))
inkscape_path = 'inkscape'
if sys.platform == 'darwin':
inkscape_app_path = '/Applications/Inkscape.app/Contents/Resources/script'
if os.path.exist... |
# -*- coding: utf-8 -*-
import re
from time import time
from cachelib._compat import iteritems, to_native
from cachelib.base import BaseCache, _items
_test_memcached_key = re.compile(r'[^\x00-\x21\xff]{1,250}$').match
class MemcachedCache(BaseCache):
"""A cache that uses memcached as backend.
The first a... |
import imageio
import numpy as np
import zengl
from skimage.filters import gaussian
import assets
from window import Window
imageio.plugins.freeimage.download()
img = imageio.imread(assets.get('Terrain002.exr')) # https://ambientcg.com/view?id=Terrain002
normals = np.zeros((512, 512, 3))
normals[:, 1:-1, 0] = img[:... |
"""
Root system data for type A
"""
#*****************************************************************************
# Copyright (C) 2008-2009 Daniel Bump
# Copyright (C) 2008-2009 Justin Walker
# Copyright (C) 2008-2009 Nicolas M. Thiery <nthiery at users.sf.net>,
#
# Distributed under the terms of th... |
#!/usr/bin/env python
"""Some corpus statistics"""
import random
import litcorpt
corpusdb = litcorpt.corpus_load()
corpus = litcorpt.corpus(corpusdb)
# Naive counting
corpus_documents = len(corpus)
# Expected: 5222 (in version 0.0.6)
corpus_words = sum(True for document in corpus for word in document.split())
# E... |
# -*- coding: utf-8 -*-
'''
Management of package repos
===========================
Package repositories can be managed with the pkgrepo state:
.. code-block:: yaml
base:
pkgrepo.managed:
- humanname: CentOS-$releasever - Base
- mirrorlist: http://mirrorlist.centos.org/?release=$releasever&... |
# Generated by the protocol buffer compiler. DO NOT EDIT!
# source: POGOProtos/Enums/Platform.proto
import sys
_b=sys.version_info[0]<3 and (lambda x:x) or (lambda x:x.encode('latin1'))
from google.protobuf.internal import enum_type_wrapper
from google.protobuf import descriptor as _descriptor
from google.protobuf im... |
# src/openprocurement.tender.belowthreshold/openprocurement/tender/belowthreshold/models.py:246
from openprocurement.api.adapters import Serializable
class SerializableTenderMultilotValue(Serializable):
serialized_name = "value"
serialize_when_none = False
def __call__(self, obj, *args, **kwargs):
... |
from django.http import JsonResponse, StreamingHttpResponse
from django.shortcuts import get_object_or_404
from django.utils.datastructures import MultiValueDictKeyError
from django.utils.decorators import method_decorator
from django.views.decorators.http import condition
from django.views.generic import ListView
fro... |
"""
sphinx.builders.html
~~~~~~~~~~~~~~~~~~~~
Several HTML builders.
:copyright: Copyright 2007-2020 by the Sphinx team, see AUTHORS.
:license: BSD, see LICENSE for details.
"""
import html
import posixpath
import re
import sys
import warnings
from hashlib import md5
from os import path
from typi... |
import logging
import shlex
from rrmngmnt.service import Service
logger = logging.getLogger(__name__)
LV_CHANGE_CMD = 'lvchange -a %s %s/%s'
class NFSService(Service):
"""
Storage management class to maintain NFS services
"""
def mount(self, source, target=None, opts=None):
"""
Moun... |
from mock import patch
import pytest
import yaml
# When switch to new version change EnvironmentPathNotFoundError to:
# from sceptre.exceptions import InvalidSceptreDirectoryError
from sceptre.exceptions import EnvironmentPathNotFoundError
from sceptre_template_fetcher.template_fetcher import TemplateFetcher
class ... |
from app.models import User, Poll
from app import db
from flask import render_template, flash, redirect, url_for, Markup, current_app
from flask_login import login_required, current_user, login_user, logout_user
from sqlalchemy.orm.attributes import flag_modified
import sys
from datetime import datetime
import operator... |
# -*- coding: UTF-8 -*-
"""
Define public APIs that are used by users here.
"""
import os
import warnings
from copy import copy
from typing import Union
import regex
from chicksexer import PACKAGE_ROOT
from ._encoder import UnseenCharacterException
from .constant import POSITIVE_CLASS, NEGATIVE_CLASS, NEUTRAL_CLASS, ... |
""" License manager module. Define a license key and a license manager classes.
"""
from __future__ import print_function
import datetime
import hashlib
from os.path import isfile, join
import logging
from six import PY3
from six import string_types
from traits.api import Any, Bool, Date, HasStrictTraits, Instance, L... |
obj0 = SystemBusNode()
obj1 = SystemBusDeviceNode(
qom_type = "TYPE_INTERRUPT_CONTROLLER",
system_bus = obj0,
var_base = "interrupt_controller"
)
obj2 = SystemBusDeviceNode(
qom_type = "TYPE_UART",
system_bus = obj0,
var_base = "uart"
)
obj3 = DeviceNode(
qom_type = "TYPE_CPU",
var_ba... |
# -*- coding: utf-8 -*-
# Copyright 2015 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Un... |
from datetime import datetime
import pandas as pd
import pytz
from nowcasting_dataset.data_sources.gsp.pvlive import (
get_installed_capacity,
load_pv_gsp_raw_data_from_pvlive,
)
def test_load_gsp_raw_data_from_pvlive_one_gsp_one_day():
"""
Test that one gsp system data can be loaded, just for one d... |
import _plotly_utils.basevalidators
class VolumeValidator(_plotly_utils.basevalidators.CompoundValidator):
def __init__(self, plotly_name="volume", parent_name="", **kwargs):
super(VolumeValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
data_c... |
import enum
from app import db
from app.models.user import User
class OrganizationRank(enum.Enum):
owner = 1
admin = 2
active_member = 3
inactive_member = 4
applicant = 5
class OrganizationStatus(enum.Enum):
pending = 1
approved = 2
denied = 3
unverified = 4
class OrganizationUser... |
from unittest import TestCase
from collective.solr.parser import SolrFlare
from collective.solr.flare import PloneFlare
class FlareTests(TestCase):
def testRelevanceFormatting(self):
def score(**kw):
return PloneFlare(SolrFlare(**kw)).data_record_normalized_score_
self.assertEqual(sc... |
#!/usr/bin/env python
import numpy
class Point:
"""Represents a point in 2D."""
def __init__(self, x, y):
self.x = x
self.y = y
def euclidean_dist(p1, p2):
"""Euclidean distance of two 2D points."""
from math import sqrt
return sqrt((p1.x-p2.x)**2 + (p1.y-p2.y)**2)
def get_min... |
"""
Tests for emitting junit xml
"""
from junit2htmlreport import parser, merge
def test_case_tojunit_failed():
"""
Test coverting a failed case to xml
:return:
"""
testclass = parser.Class()
testclass.name = "myclass"
testcase = parser.Case()
testcase.name = "mytest"
testcase.tes... |
# -*- coding:utf-8 -*-
#!/usr/bin/env python
"""
Date: 2019/9/30 13:58
Desc: 奇货可查网站目前已经商业化运营, 特提供奇货可查-指数数据接口, 方便您程序化调用
注：期货价格为收盘价; 现货价格来自网络; 基差=现货价格-期货价格; 基差率=(现货价格-期货价格)/现货价格 * 100 %.
"""
from typing import AnyStr
import pandas as pd
import requests
from akshare.futures.cons import (
QHKC_INDEX_URL,
QHKC_IND... |
from absl.testing import absltest
from pylox.parser import scanner
Token = scanner.Token
TokenType = scanner.TokenType
scan = scanner.scan
class ScannerTest(absltest.TestCase):
def test_eof(self):
assert list(scan('')) == [Token(TokenType.EOF, '', None, 1)]
if __name__ == '__main__':
absltest.main() |
import os
import torch
from torch import nn
from torch.autograd import Function
from torch.utils.cpp_extension import load
module_path = os.path.dirname(__file__)
fused = load(
'fused',
sources=[
os.path.join(module_path, 'fused_bias_act.cpp'),
os.path.join(module_path, 'fused_bias_act_kernel... |
# noinspection PyShadowingBuiltins,PyUnusedLocal
def compute(x, y):
return x + y |
from functools import reduce, wraps, partial
from itertools import product
from operator import mul
import collections
import operator
import random
import torch
import numpy as np
from torch._six import inf
from torch.autograd import Variable
import collections.abc
from typing import List, Sequence, Tuple, Dict, Any... |
from zeeguu.core.test.rules.article_rule import ArticleRule
from zeeguu.core.test.rules.base_rule import BaseRule
from zeeguu.core.test.rules.language_rule import LanguageRule
from zeeguu.core.test.rules.url_rule import UrlRule
from zeeguu.core.model.text import Text
class TextRule(BaseRule):
"""A Rule testing cl... |
# 19 July 2014
# in case any of this upsets Python purists it has been converted from an equivalent JRuby program
# this is designed to work with ... ArduinoPC2.ino ...
# the purpose of this program and the associated Arduino program is to demonstrate a system for sending
# and receiving data between a PC and an ... |
"""
WSGI config for epixdeploy project.
It exposes the WSGI callable as a module-level variable named ``application``.
For more information on this file, see
https://docs.djangoproject.com/en/2.1/howto/deployment/wsgi/
"""
import os
from django.core.wsgi import get_wsgi_application
os.environ.setdefault('DJANGO_SE... |
#!/usr/bin/python
################################################################################
#
# File: wiimode_node.py
# RCS: $Header: $
# Description: Top level ROS node that publishes Wiimote data
# and allows Wiimote rumble/LED setting.
# Author: Andreas Paepcke
# Created:... |
# coding=utf-8
# --------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License. See License.txt in the project root for
# license information.
#
# Code generated by Microsoft (R) AutoRest Code Generator.
# Changes ... |
# Copyright 2019 Extreme Networks, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to i... |
#! /usr/bin/env python3
"""A program to verify output of prophyle-assembler.
Author: Karel Brinda <kbrinda@hsph.harvard.edu>
Licence: MIT
"""
import sys
import re
from Bio import SeqIO
in1_fn = sys.argv[1]
in2_fn = sys.argv[2]
out1_fn = sys.argv[3]
out2_fn = sys.argv[4]
inter_fn = sys.argv[5]
k = int(sys.argv[6])
... |
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import pycocotools.coco as coco
from pycocotools.cocoeval import COCOeval
import numpy as np
import json
import os
import torch.utils.data as data
import src.config as cf
sensor = 'fir'
class FIR(data.Datase... |
# Copyright 2021 the authors.
# This file is part of Hy, which is free software licensed under the Expat
# license. See the LICENSE.
from __future__ import unicode_literals
from contextlib import contextmanager
from math import isnan, isinf
from hy import _initialize_env_var
from hy.errors import HyWrapperError
from f... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
import sys
import os
import lib
import api
import inspect
from glob import glob
from core.alert import messages
from core.alert import info
from core.alert import warn
from core._die import __die_failure
from core.compatible import is_windows
from core.config import _core_... |
#!/usr/bin/env python
# Copyright 2014 The Chromium Authors. All rights reserved.
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.
"""
Enhances `git log --graph` view with information on commit branches + tags that
point to them. Items are colorized as follows:
*... |
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... |
import unittest
from onmt.translate.random_sampling import RandomSampling
import torch
class TestRandomSampling(unittest.TestCase):
BATCH_SZ = 3
INP_SEQ_LEN = 53
DEAD_SCORE = -1e20
BLOCKED_SCORE = -10e20
def test_advance_with_repeats_gets_blocked(self):
n_words = 100
repeat_idx ... |
import os
import zipfile
import tarfile
import io
from collections import defaultdict, namedtuple
import pytest
import mock
from chalice.config import Config
from chalice import Chalice
from chalice import package
from chalice.deploy.packager import PipRunner
from chalice.deploy.packager import DependencyBuilder
from... |
# -*- coding: utf-8 -*-
"""Setup module for BioKEEN."""
import setuptools
if __name__ == '__main__':
setuptools.setup() |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
__author__ = "Larissa Triess"
__email__ = "mail@triess.eu"
from typing import List
import tensorflow as tf
from my_tf_ops.knn_op import k_nearest_neighbor_op as get_knn
from ..layers.sample_and_group import group
class FeaturePropagationModule(tf.keras.models.Model)... |
import torch
import torch.nn as nn
class ComplexResGate(nn.Module):
def __init__(self, embedding_size):
super(ComplexResGate, self).__init__()
self.fc1 = nn.Linear(2*embedding_size, 2*embedding_size)
self.fc2 = nn.Linear(2*embedding_size, embedding_size)
self.sigmoid = nn.Sigmoid()... |
class DrawTree(object):
def __init__(self, tree, depth=-1):
self.x = -1
self.y = depth
self.tree = tree
self.children = [DrawTree(t) for t in tree]
self.thread = None
self.offset = 0
def left(self):
return self.thread or len(self.children) and self.child... |
from pydantic import BaseModel
from src.User.InterfaceAdapters.Payloads.UserAssignRolePayload import UserAssignRolePayload
from typing import List
class UserAssignRoleRequest(UserAssignRolePayload, BaseModel):
rolesId: List[str] = []
def getRolesId(self):
return self.rolesId |
"""
Copyright 2020 The Magma Authors.
This source code is licensed under the BSD-style license found in the
LICENSE file in the root directory of this source tree.
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES O... |
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under t... |
# Copyright 2010-2011 OpenStack Foundation
# Copyright (c) 2013 Hewlett-Packard Development Company, L.P.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licens... |
""" submit failure or test session information to a pastebin service. """
import pytest
import py, sys
import tempfile
def pytest_addoption(parser):
group = parser.getgroup("terminal reporting")
group._addoption('--pastebin', metavar="mode",
action='store', dest="pastebin", default=None,
choic... |
import torch
import torch.nn as nn
import torch.nn.functional as F
def initial_bounds(x0, epsilon):
'''
x0 = input, b x c x h x w
'''
upper = x0+epsilon
lower = x0-epsilon
return upper, lower
def weighted_bound(layer, prev_upper, prev_lower):
prev_mu = (prev_upper + prev_lower)/2
prev_... |
"""
Note:
This script is imported from scikit-learn 0.20.X,
because scikit-learn 0.21.0 is no longer supported these functions
"""
"""
Randomized Lasso/Logistic: feature selection based on Lasso and
sparse Logistic Regression
"""
# Author: Gael Varoquaux, Alexandre Gramfort
#
# License: BSD 3 clause
import itertools... |
import warnings
from leapp.exceptions import StopActorExecutionError
from leapp.libraries.stdlib import api
from leapp.libraries.common import rpms
from leapp.models import InstalledRPM, RPM
no_yum = False
no_yum_warning_msg = "package `yum` is unavailable"
try:
import yum
except ImportError:
no_yum = True
... |
"""
Disclaimer
All investment strategies and investments involve risk of loss.
Nothing contained in this program, scripts, code or repositoy should be
construed as investment advice.Any reference to an investment's past or
potential performance is not, and should not be construed as, a recommendation
or as a guarantee... |
# -*- coding: utf-8 -*-
"""
har2lilua Tests
"""
from __future__ import unicode_literals
from io import open
import unittest
from har2lilua import har2lilua
def _read_testfiles():
with open("test.har", "r", encoding="utf-8") as fil:
harstring = fil.read()
with open("test.lua", "r", encoding="utf-8") as... |
#!/usr/bin/env python
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, sof... |
import torch
import torch.nn as nn
class MNIST(nn.Module):
def __init__(self):
super(MNIST, self).__init__()
self.shared_encoder = torch.nn.Sequential(
nn.Conv2d(in_channels=1, out_channels=32, kernel_size=5, padding=2),
nn.ReLU(inplace=True),
nn.MaxPool2d(2, 2)... |
# -*- coding: utf-8 -*-
import os
import sys
import idcmanager_sdk.model.idcmanager.user_setting_pb2
import google.protobuf.empty_pb2
import idcmanager_sdk.api.idcrack.list_pb2
import idcmanager_sdk.api.idcrack.list_device_type_pb2
import idcmanager_sdk.api.idcrack.list_user_setting_pb2
import idcmanager_sdk.api... |
# coding: utf-8
"""
SCORM Cloud Rest API
REST API used for SCORM Cloud integrations. # noqa: E501
OpenAPI spec version: 2.0
Contact: systems@rusticisoftware.com
Generated by: https://github.com/swagger-api/swagger-codegen.git
"""
import pprint
import re # noqa: F401
import six
class UserIn... |
# Copyright 2017 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or a... |
"""Adds a discoverable field to terms.
Revision ID: 85bff3e51dc4
Revises: ab9879051d6c
Create Date: 2020-07-09 09:54:09.343487
"""
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision = "85bff3e51dc4"
down_revision = "ab9879051d6c"
branch_labels = None
depends_on = None
... |
# Generated from STIXPattern.g4 by ANTLR 4.8
# encoding: utf-8
from __future__ import print_function
from antlr4 import *
from io import StringIO
import sys
def serializedATN():
with StringIO() as buf:
buf.write(u"\3\u608b\ua72a\u8133\ub9ed\u417c\u3be7\u7786\u5964\3")
buf.write(u"8\u00eb\4\2\t\2\4... |
"""
ASGI config for danniesMovies project.
It exposes the ASGI callable as a module-level variable named ``application``.
For more information on this file, see
https://docs.djangoproject.com/en/3.2/howto/deployment/asgi/
"""
import os
from django.core.asgi import get_asgi_application
os.environ.setdefault('DJANGO... |
#!/usr/bin/env python
# coding: utf8
#
# Copyright (c) 2020 Centre National d'Etudes Spatiales (CNES).
#
# This file is part of CARS
# (see https://github.com/CNES/cars).
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obta... |
import theano.tensor as TT
import theano
from rllab.misc import logger
from rllab.misc.overrides import overrides
from rllab.misc import ext
from rllab.algos.batch_polopt import BatchPolopt
from rllab.optimizers.first_order_optimizer import FirstOrderOptimizer
from rllab.core.serializable import Serializable
class VP... |
class Group(object):
def __init__(self, _name):
self.name = _name
self.groups = []
self.users = []
def add_group(self, group):
self.groups.append(group)
def add_user(self, user):
self.users.append(user)
def get_groups(self):
return self.groups
def ... |
#!/usr/bin/env python
# Copyright (c) 2015-2016 The Bitcoin Core developers
# Distributed under the MIT software license, see the accompanying
# file COPYING or http://www.opensource.org/licenses/mit-license.php.
'''
This checks if all command line args are documented.
Return value is 0 to indicate no error.
Author: @... |
# Generated by Django 3.1.7 on 2021-03-04 07:55
from django.db import migrations, models
import django.utils.timezone
class Migration(migrations.Migration):
dependencies = [
('notification', '0003_notifications_tweeter'),
]
operations = [
migrations.AddField(
model_name='not... |
# -------------------------------------------------
# IMPORTS
# -------------------------------------------------
import numpy as np
from tensorflow import set_random_seed
seed = 1
np.random.seed(seed)
set_random_seed(seed)
import keras
import tempfile
import keras.models
from keras import backend as K
from shift_d... |
def printTime(remtime):
hrs = int(remtime)/3600
mins = int((remtime/60-hrs*60))
secs = int(remtime-mins*60-hrs*3600)
timedisp="Time remaining : "
if hrs>0:
timedisp+=str(hrs)+"Hrs "
if mins>0:
timedisp+=str(mins)+"Mins "
timedisp += str(secs)+"Secs"
print(timedisp) |
"""
Regression tasks estimate a numeric variable, such as the price of a house or voter
turnout.
This example is adapted from a
[notebook](https://gist.github.com/mapmeld/98d1e9839f2d1f9c4ee197953661ed07) which
estimates a person's age from their image, trained on the
[IMDB-WIKI](https://data.vision.ee.ethz.ch/cvl/rro... |
"""Check behaviors of ``Line2D``.
"""
import numpy as np
import matplotlib.pyplot as plt
from figpptx.comparer import Comparer
class Line2DCheck:
"""Line2DCheck.
"""
@classmethod
def run(cls, ax):
cls.various_line2d(ax)
Comparer().compare(ax.figure)
@classmethod
def various_l... |
import unittest
from context import parser
class TVShowFileParserTests(unittest.TestCase):
def setUp(self):
self.filename = parser.Parser("S.W.A.T.s01E01.1080p.avi")
def tearDown(self):
self.filename = None
def testObjValuesSet(self):
self.assertEqual(self.filename._showName, "S... |
"""
This module runs octave modules
copyright (c) P-O Quirion
Centre de recherche de l'institut de Gériatrie de Montréal
Université de Montréal, 2015-2016
Maintainer : poq@criugm.qc.ca
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (th... |
# tagging those table rows in new-north-shore-network.md still doesn't work
# warn for single space indent in a few places (generic block and tag)
from . import regexshim as _re
from . import errors
from .blocks import FakeFormatStdBlocks
from .elements import *
from .lineparser import *
_IN_PARAGRAPH = Sentinel("I... |
import os
import git
import shutil
import tempfile
import yaml
from distutils import dir_util
import mock
import pytest
import mlflow
from mlflow.entities import RunStatus, ViewType, Experiment, SourceType
from mlflow.exceptions import ExecutionException, MlflowException
from mlflow.store.file_store import FileStor... |
from __future__ import print_function
import FWCore.ParameterSet.Config as cms
import sys
import six
## Helpers to perform some technically boring tasks like looking for all modules with a given parameter
## and replacing that to a given value
# Next two lines are for backward compatibility, the imported functions an... |
import numpy as np
import cv2
import socket
#define
#Curryのしきい値
Edge_min = 100
Edge_max = 200
lazer_on_message='lazer_on'
lazer_off_message='lazer_off'
frame_start_message='frame_start'
def send_udp_message(message):
try:
udp.sendto(message.encode(), address) #文字列をバイトデータに変換してaddress宛に送信
except Keyboard... |
from pyinfra import host
from pyinfra.operations import files
# Note: This requires files in the files/ directory.
SUDO = True
if host.fact.linux_name in ['CentOS', 'RedHat']:
files.download(
{'Download the Docker repo file'},
'https://download.docker.com/linux/centos/docker-ce.repo',
'/e... |
# -*- coding: utf-8 -*-
import os
import json
import pickle
from datetime import datetime, timedelta
import numpy as np
import pandas as pd
from utils import day_of_month
def is_first_day(shop_timeline, seq, dt):
'''Jude whether a day is the first day of the sequence
'''
timeline = shop_timeline[seq]
... |
import io
import sys
import time
import gzip
import random
import pandas as pd
def parse_vcf(vcf_path: str, tumor_normal: bool = False, ploidy: int = 2,
include_homs: bool = False, include_fail: bool = False, debug: bool = False,
choose_random_ploid_if_no_gt_found: bool = True):
tt = ... |
#!/usr/bin/env python
"""Django's command-line utility for administrative tasks."""
import os
import sys
def main():
os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'mylib.settings')
try:
from django.core.management import execute_from_command_line
except ImportError as exc:
raise ImportEr... |
# -*- coding: utf-8 -*-
"""**DOCSTRING**.
description
Routing Listings
----------------
"""
###############################################################################
# IMPORTS
# GENERAL
import numpy as np
import astropy.units as u
import matplotlib.pyplot as plt
from matplotlib import rcParams
import seab... |
import os
import logging
from abc import ABCMeta, abstractmethod
from six import add_metaclass
import requests
from util.abchelpers import nooper
from util.repomirror.validator import RepoMirrorConfigValidator
from _init import CONF_DIR
TOKEN_VALIDITY_LIFETIME_S = 60 # Amount of time the repo mirror has to call the... |
"""Process simulation results."""
import sys
import os
import pathlib
import mmap
import numpy
import pandas
timesteps = (1e-2, 1e-3, 1e-4, 1e-5)
def save_results_csv(results):
"""Save results to seperate CSV files."""
with open("results-IP.csv", "w", newline="") as f:
scene_names = sorted(list(res... |
import os
import uuid
import base64
import multiprocessing
import traceback
import tr
from flask import Flask, request, jsonify
from flask_cors import CORS
app = Flask(__name__)
CORS(app)
def tr_run(path, return_dict):
try:
return_dict['ret'] = tr.run(path)
except:
return_dict['ret'] = None
... |
# -*- coding: utf-8 -*-
###########################################################################
# Copyright (c), The AiiDA team. All rights reserved. #
# This file is part of the AiiDA code. #
# ... |
# -*- coding: utf-8 -*-
#
# Copyright (C) 2012-2020 Edgewall Software
# All rights reserved.
#
# This software is licensed as described in the file COPYING, which
# you should have received as part of this distribution. The terms
# are also available at https://trac.edgewall.org/wiki/TracLicense.
#
# This software cons... |
"""Create and save random price data"""
from random import random
import os
from datetime import datetime, timedelta
import pandas as pd # type: ignore
def random_walker(data_length: int):
"""Create a random walk data list"""
# seed(1)
random_walk = list()
random_walk.append(-1 if random() < 0.5 else... |
from abc import ABC, abstractmethod
class AbstractStatistcs(ABC):
@abstractmethod
def __init__(self, *args):
# Args can be used for building from dumped strings.
# Init needs to implement load from string.
pass
@abstractmethod
def __str__(self):
pass
@abstractmeth... |
import sys
mass_file=open('integer_mass_table.txt')
mass_table = {}
for line in mass_file:
aa, mass = line.rstrip().split(' ')
mass_table[int(mass)] = aa
def SpectrumGraph(spectrum):
adj_list = []
for i in range(len(spectrum)):
for j in range(i, len(spectrum)):
if spectrum[j] - sp... |
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT license.
import unittest
import ast
from textwrap import dedent
import inspect
from typing import List, Tuple
from pyis.onnx.transpiler.passes.type_infer import TypeInfer
from pyis.onnx.transpiler.ast_printer import pformat_ast
class... |
# Code in this file is copied and adapted from
# https://github.com/openai/evolution-strategies-starter and from
# https://github.com/modestyachts/ARS
from collections import namedtuple
import logging
import numpy as np
import random
import time
import ray
from ray.rllib.agents import Trainer, with_common_config
from... |
from PySide2.QtCore import Qt, QCoreApplication
from PySide2.QtGui import QShowEvent
from PySide2.QtWidgets import QDialog, QDialogButtonBox, QVBoxLayout, QFormLayout, QLabel, QComboBox, \
QWidget, QSizePolicy
from livia.input.DeviceFrameInput import Device
from livia_ui.gui.views.utils.DevicePanel import DevicePa... |
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