rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
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Style.MAP_RULES_PROP ); | IStyleModel.MAP_RULES_PROP ); | private void writeStyleProps( DesignElement obj ) { // Background property( obj, Style.BACKGROUND_ATTACHMENT_PROP ); property( obj, Style.BACKGROUND_COLOR_PROP ); property( obj, Style.BACKGROUND_IMAGE_PROP ); property( obj, Style.BACKGROUND_POSITION_X_PROP ); property( obj, Style.BACKGROUND_POSITION_Y_PROP ); p... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/d802c33711e0d111551ae23575895cd060f085b6/ModuleWriter.java/buggy/model/org.eclipse.birt.report.model/src/org/eclipse/birt/report/model/writer/ModuleWriter.java | [
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if (this.currentTxID != null) | if (sessionState.getCurrentTxId() != null) | public void start(Xid xid, int flags) throws XAException { if (log.isTraceEnabled()) log.trace("Start xid=" + xid + ", flags=" + flags + " " + this); boolean convertTx = false; if (this.currentTxID != null) { if (flags == TMNOFLAGS && this.currentTxID instanceof LocalTxXid... | 3806 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3806/90e4b161b21b8aef910dbc6f515ceceadf11bf49/JBossXAResource.java/clean/src/main/org/jboss/jms/client/JBossXAResource.java | [
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ProteinFileParser protInfoParser = new ProteinFileParser( ProteinFileParser.PERSIST_CONCURRENTLY, cli.geneDao, cli.gpDao ); | ProteinFileParser protInfoParser = new ProteinFileParser( cli.geneDao, cli.gpDao ); | public static void main( String args[] ) throws IOException { ProteinLoaderCLI cli = null; try { /* OPTIONS STAGE */ /* help */ OptionBuilder.withDescription( "Print help for this application" ); Option helpOpt = OptionBuilder.create( 'h' ); /* us... | 4335 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4335/29794625b905f79d0383dd51bb5cf76e80f8045b/ProteinLoaderCLI.java/buggy/src/impl/edu/columbia/gemma/loader/genome/gene/ProteinLoaderCLI.java | [
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String stringPattern = RubyString.stringValue(args[0]).getValue(); | String stringPattern = RubyString.stringValue(args[0]).toString(); | private RubyRegexp getPattern(IRubyObject[] args) { if (args.length == 0) { isWhitespace = true; return RubyRegexp.newRegexp(runtime, "\\s+", 0, null); } if (args[0] instanceof RubyRegexp) { // Even if we have whitespace-only explicit regexp we do not ... | 46454 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46454/9f2efc63a858fa0507245b207025eab027840a04/Split.java/clean/src/org/jruby/util/Split.java | [
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parsePluginList = PARSE_PLUGIN_LIST.getPluginList(DEFAULT_PLUGIN); | parsePluginList = this.parsePluginList.getPluginList(DEFAULT_PLUGIN); | private static List findExtensions(String contentType){ Extension[] extensions = X_POINT.getExtensions(); // Look for a preferred plugin. List parsePluginList = PARSE_PLUGIN_LIST.getPluginList(contentType); List extensionList = matchExtensions(parsePluginList, extensions, contentType); if (exte... | 1316 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1316/329ff64e9d7295aff108f85e9a8103f5e5f8f398/ParserFactory.java/clean/src/java/org/apache/nutch/parse/ParserFactory.java | [
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transports.put("aim", new TransportInstance(TransportType.aim, "AIM Transport", "org.jivesoftware.wildfire.gateway.protocols.oscar.OSCARGateway", componentManager)); | transports.put("aim", new TransportInstance(TransportType.aim, "AIM Transport", "org.jivesoftware.wildfire.gateway.protocols.oscar.OSCARTransport", componentManager)); | public void initializePlugin(PluginManager manager, File pluginDirectory) { picoContainer.start(); transports = new Hashtable<String,TransportInstance>(); componentManager = ComponentManagerFactory.getComponentManager(); /* Set up AIM transport. */ transports.put("aim", new Transp... | 51636 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51636/386a666102a779cc8417bb3558f6569cb225ee82/GatewayPlugin.java/clean/src/plugins/gateway/src/java/org/jivesoftware/wildfire/gateway/GatewayPlugin.java | [
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public Mapper createMapper() | public void createMapper( final FileNameMapper mapper ) | public Mapper createMapper() throws TaskException { if( m_mapper != null ) { throw new TaskException( "Cannot define more than one mapper" ); } m_mapper = new Mapper(); return m_mapper; } | 639 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/639/2afc643a3ea676cc68f2f010ea3a7560b7a0a3af/Native2Ascii.java/buggy/proposal/myrmidon/src/todo/org/apache/tools/ant/taskdefs/text/Native2Ascii.java | [
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protected void genArrayCreate(Context ctx, Primitive prim, Tree size) { | protected void genArrayCreate(Context ctx, Primitive prim, Tree size) throws JCode.OffsetTooBigException { | protected void genArrayCreate(Context ctx, Primitive prim, Tree size) { genLoad(ctx, size, JType.INT); JType type; switch (prim) { case NEW_ZARRAY : type = JType.BOOLEAN; break; case NEW_BARRAY : type = JType.BYTE; break; case NEW_SARRAY : type = JType.SHORT; break; ... | 10130 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10130/17d738fccbb3f04a9f884ecae15b6300c41501cf/GenJVM.java/clean/sources/scalac/backend/jvm/GenJVM.java | [
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flush(); | _printer.flush(); | public void endDocument() throws SAXException { // Print all the elements accumulated outside of // the root element. serializePreRoot(); // Flush the output, this is necessary for buffered output. flush(); // If an exception was thrown during serializing, this wo... | 1831 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1831/6a9b22474c21af7de8c770f415756a79307aa72e/BaseMarkupSerializer.java/clean/src/org/apache/xml/serialize/BaseMarkupSerializer.java | [
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throw new CoreException(new Status(IStatus.ERROR, BugzillaCorePlugin.PLUGIN_ID, IStatus.OK, "could not update repository configuration", e)); | throw new CoreException(new Status(IStatus.ERROR, BugzillaCorePlugin.PLUGIN_ID, IStatus.OK, "could not update repository configuration", e)); | public void updateAttributes(final TaskRepository repository, Proxy proxySettings, IProgressMonitor monitor) throws CoreException { try { BugzillaCorePlugin.getRepositoryConfiguration(true, repository.getUrl(), proxySettings, repository.getUserName(), repository.getPassword(), repository.getCharacterEncoding()); }... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/871dc4e66481486437f88d74914ef5aa35903f35/BugzillaRepositoryConnector.java/buggy/org.eclipse.mylyn.bugzilla.core/src/org/eclipse/mylyn/internal/bugzilla/core/BugzillaRepositoryConnector.java | [
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assertFalse(root.hasEntry(p("dir"))); | assertFalse(root.hasEntry(p("/dir"))); | public void testCeatingDirectory() { assertFalse(root.hasEntry(p("dir"))); root.doCreateDirectory(null, p("dir")); assertTrue(root.hasEntry(p("dir"))); assertEquals(DirectoryEntry.class, root.getEntry(p("dir")).getClass()); assertTrue(root.getEntry(p("dir")).getChildren().isEmpty()); } | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/8a6fdbc15b3cd4aaa232cf2026aa4a60418c162a/RootEntryDirectoriesTest.java/clean/LocalVcs/test/com/intellij/localvcs/RootEntryDirectoriesTest.java | [
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sb.append(x); sb.append("="); sb.append(i); sb.append('\n'); | if(realLength > 100*1000) Logger.normal(this, "["+realLength+"] = "+i+" (prev="+i.getPrev()+")"); | protected synchronized void checkList() { // FIXME once satisfied that this works, make it only happen occasionally int statedLength = list.size(); int realLength = 0; sb.setLength(0); int x = 0; for(Enumeration e = list.elements();e.hasMoreElements();) { UpdatableSortedLinkedListItem i... | 45341 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45341/b4ecaa4055b5835413830d4125c72de27d68e306/UpdatableSortedLinkedList.java/clean/src/freenet/support/UpdatableSortedLinkedList.java | [
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DebuggerThread() { makeDaemon(true); } | DebuggerThread() { makeDaemon(true); } | DebuggerThread() { makeDaemon(true); } | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/adc94596e6496781a4e0763b29a52be3daab1a7a/DebuggerThread.java/buggy/rvm/src/vm/scheduler/DebuggerThread.java | [
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statusLabel.setText("Starting to load " + currentURL); urlField.setText(currentURL); | if (null != statusLabel && null != urlField) { statusLabel.setText("Starting to load " + currentURL); urlField.setText(currentURL); } | public void eventDispatched(WebclientEvent event){ boolean enabledState; String status; if (event instanceof DocumentLoadEvent) { switch ((int) event.getType()) { case ((int) DocumentLoadEvent.START_DOCUMENT_LOAD_EVENT_MASK): stopButton.setEnabled(true); refreshButton.setEna... | 7555 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7555/636945d6cae7057bcd6b97b497339ba9a9435bd3/EMWindow.java/buggy/java/webclient/classes_spec/org/mozilla/webclient/test/EMWindow.java | [
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} | } | public Hashtable getExportpoints() { if((m_exportpoints == null) || (m_exportpoints.size() == 0)){ m_exportpoints = new Hashtable(); try { NodeList exportpointsList = m_xmlReg.getElementsByTagName("exportpoint"); for (int x = 0; x < exportpointsList.getLength(); x++) { ... | 8585 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8585/5c27bc595df503fc5e3629ec92d99ba38b58a0e9/CmsRegistry.java/clean/src/com/opencms/file/CmsRegistry.java | [
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bindingColumn.setAggregrateOn( ( (GroupHandle) DEUtil.getGroups( (DesignElementHandle) target ) | bindingColumn.setAggregateOn( ( (GroupHandle) DEUtil.getGroups( (DesignElementHandle) target ) | protected static DataItemHandle performInsertDataSetColumn( ResultSetColumnHandle model, Object target, Object targetParent ) throws SemanticException { /* * search the target container, if container has the same dataset, add * the column binding if it does not exist in the container. If the * container's d... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/25925f18944f0667bd8c9a5e0179d4a86fc250ba/InsertInLayoutUtil.java/buggy/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/internal/ui/dnd/InsertInLayoutUtil.java | [
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}catch (org.omg.CORBA.SystemException _sysex) | } catch (org.omg.CORBA.SystemException _sysex) | protected void invoke(Interceptor interceptor) throws UserException { info.caller_op = op; try { Debug.output( Debug.DEBUG1 | Debug.INTERCEPTOR, "Invoking CI " + interceptor.name()); switch (op) { case SEND_REQUEST : ((ClientRequestInterceptor... | 46355 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46355/1dfba0b8b47c2634b0b6ce9d9cf75ada49b78f37/ClientInterceptorIterator.java/buggy/src/org/jacorb/orb/portableInterceptor/ClientInterceptorIterator.java | [
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if (yy_r) { | if (yyFlexR) { | public Symbol next_token() throws java.io.IOException { int yy_input; int yy_action; int [] yytrans_l = yytrans; int [] yy_rowMap_l = yy_rowMap; byte [] yy_attr_l = YY_ATTRIBUTE; int yy_pushbackPos_l = yy_pushbackPos = -1; boolean yy_was_pushback; while (true) { // cached fields: int... | 6220 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6220/c5b664099369e6ab7a60ec6354a7dd4322f53873/LexScan.java/clean/jflex/src/JFlex/LexScan.java | [
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} catch (Exception e) | } catch (Exception e) | public void sendMessage(RequestMessage requestMessage) { if (!connected()) createConnection(); ResponseMessage responseMessage = null; boolean transactionComplete = false; int badTransmissionCount = 0; while (!transactionComplete) { String requestMe... | 51914 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51914/e3af0ac6dc29032be374466553b7374a4fbc7374/ServicesClient.java/buggy/ecologylab/services/distributed/legacy/ServicesClient.java | [
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offsets = (int) in.getFilePointer(); | offsets = (int) (fileLength - in.available()); | protected void initFile(String id) throws FormatException, IOException { super.initFile(id); in = new RandomAccessFile(id, "r"); little = true; location = 0; // some DICOM files have a 128 byte header followed by a 4 byte identifier byte[] four = new byte[4]; in.seek(128); in.read(four); if... | 55303 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55303/91859a26506b8a1d312b398da2c3ecd94e02fa60/DicomReader.java/clean/loci/formats/DicomReader.java | [
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x = -x; | bits &= 0x7fffffffffffffffL; x = Double.longBitsToDouble(bits); | public static Object abs (Object value) { if (value == null || value == Values.empty) return value; value = numberCast(value); if (value instanceof Double) { Double d = (Double) value; double x = d.doubleValue(); if (x >= 0) return d; x = -x; /* #ifdef J... | 36870 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/36870/c6abdf4f35134d717a6c609763ba2ffb329a5e9b/NumberValue.java/buggy/gnu/xquery/util/NumberValue.java | [
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Mounted m = (Mounted)equipmentList.elementAt(cs.getIndex()); | Mounted m = (Mounted)equipmentList.get(cs.getIndex()); | public EquipmentType getEquipmentType(CriticalSlot cs) { if (cs.getType() != CriticalSlot.TYPE_EQUIPMENT) return null; Mounted m = (Mounted)equipmentList.elementAt(cs.getIndex()); return m.getType(); } | 4135 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4135/cbe74d020e74a85c0e3b8ebf32d1ebc85c1ba62f/Entity.java/clean/megamek/src/megamek/common/Entity.java | [
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if (procedureNamePattern == null) procedureNamePattern = "%"; if (columnNamePattern == null) columnNamePattern = "%"; | public java.sql.ResultSet getProcedureColumns(String catalog, String schemaPattern, String procedureNamePattern, String columnNamePattern) throws SQLException { if (procedureNamePattern == null) procedureNamePattern = "%"; if (columnNamePattern == null) columnNamePattern = "%"; // for now, this returns an empty... | 11803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11803/7c553901d7ab010ad1cb5bf44f9ca2fdae83909a/AbstractJdbc1DatabaseMetaData.java/clean/src/interfaces/jdbc/org/postgresql/jdbc1/AbstractJdbc1DatabaseMetaData.java | [
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usedMemCol = new Color(display, 255, 255, 175); | usedMemCol = display.getSystemColor(SWT.COLOR_INFO_BACKGROUND); | public HeapStatus(Composite parent, IPreferenceStore prefStore) { super(parent, SWT.NONE); maxMem = getMaxMem(); maxMemKnown = maxMem != Long.MAX_VALUE; this.prefStore = prefStore; prefStore.addPropertyChangeListener(prefListener); setUpdateIntervalInMS(prefStore.getInt(IHeapStatusConst... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/8fb6039a25cd362736c55942c574a206e62facca/HeapStatus.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/HeapStatus.java | [
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if (bufferPosition + window < cepstraBufferSize) { Arrays.fill(cepstraBuffer, bufferPosition, bufferPosition + window, last); bufferPosition += window; } else { for (int i = 0; i < window; i++) { addCepstrumData(last); } | for (int i = 0; i < window; i++) { addCepstrumData(last); | private int replicateLastCepstrum() { float[] last = null; if (bufferPosition > 0) { last = this.cepstraBuffer[bufferPosition - 1]; } else if (bufferPosition == 0) { last = cepstraBuffer[cepstraBuffer.length - 1]; } else { throw new Error("BufferPosition ... | 8321 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8321/95b0c224eabe18249590c45d72f37aa525597dc9/LiveFeatureExtractor.java/clean/sphinx4/edu/cmu/sphinx/frontend/LiveFeatureExtractor.java | [
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public org.quickfix.field.OrderQty2 getOrderQty2() throws FieldNotFound { org.quickfix.field.OrderQty2 value = new org.quickfix.field.OrderQty2(); | public quickfix.field.OrderQty2 getOrderQty2() throws FieldNotFound { quickfix.field.OrderQty2 value = new quickfix.field.OrderQty2(); | public org.quickfix.field.OrderQty2 getOrderQty2() throws FieldNotFound { org.quickfix.field.OrderQty2 value = new org.quickfix.field.OrderQty2(); getField(value); return value; } | 8803 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8803/fecc27f98261270772ff182a1d4dfd94b5daa73d/OrderCancelReplaceRequest.java/buggy/src/java/src/quickfix/fix41/OrderCancelReplaceRequest.java | [
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verifyFieldsForClass(anObject, aClass.getSuperclass(), alreadyProcessed); try { alreadyProcessed.addElement(anObject); | verifyFieldsForClass(anObject, aClass.getSuperclass(), alreadyProcessed); try { alreadyProcessed.addElement(anObject); | static private void verifyFieldsForClass( Object anObject, Class aClass, Vector alreadyProcessed ) { if (alreadyProcessed.contains(anObject) || isBaseObjectClass(aClass)) { return; } verifyFieldsForClass(anObject, aClass.getSuperclass(), alreadyProcessed); try { alreadyProcessed.addElement(anObject); Field[]... | 57371 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57371/c26c57f3ac4851e6bc9c5df8515ac73f4045eebf/Verifier.java/clean/jmock/core/src/org/jmock/util/Verifier.java | [
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return RubyString.newString(getRuntime(), "" + getValue()); | return getRuntime().newString("" + getValue()); | public RubyString to_s() { return RubyString.newString(getRuntime(), "" + getValue()); } | 45298 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45298/870e1da9b41bfdbae259e1fc5f18fc8b76686998/RubyFloat.java/clean/src/org/jruby/RubyFloat.java | [
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ruby.getRubyFrame().tmpPush(); ruby.getScope().push(); CRefNode lRefValue = getRefValue(); if (lRefValue != null) { savedCRef = ruby.getCRef(); ruby.setCRef(lRefValue); ruby.getRubyFrame().setCbase(lRefValue); } | ruby.getRubyFrame().tmpPush(); ruby.getScope().push(); CRefNode lRefValue = getRefValue(); if (lRefValue != null) { savedCRef = ruby.getCRef(); ruby.setCRef(lRefValue); ruby.getRubyFrame().setCbase(lRefValue); } | public RubyObject eval(Ruby ruby, RubyObject self) { CRefNode savedCRef = null; ruby.getRubyFrame().tmpPush(); ruby.getScope().push(); CRefNode lRefValue = getRefValue(); if (lRefValue != null) { savedCRef = ruby.getCRef(); ruby.setCRef(lRefValue); ruby.getRubyFrame().setCbase(lRefValue); } if (getTable()... | 52337 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52337/7798138390a306a202dcec9bde45928dae2e852e/ScopeNode.java/clean/org/jruby/nodes/ScopeNode.java | [
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CommentPK pk = (CommentPK)entityContext.getPrimaryKey(); | CommentPK pk = (CommentPK) entityContext.getPrimaryKey(); | public void ejbLoad() throws RemoteException { PreparedStatement stmt= null; Connection conn = null; try { CommentPK pk = (CommentPK)entityContext.getPrimaryKey(); id = pk.getId(); conn = getConnection(); stmt = conn.prepareStatement("SELECT * FROM comments WHERE id=?"); stmt.set... | 5750 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5750/3d57ae5a342bc10d6c418636c07193a0289ffd6b/CommentBean.java/buggy/EJB_EntityBean_id_BMP/edu/rice/rubis/beans/CommentBean.java | [
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return new BugCodeMatcher(element.valueOf("@name")); | return new BugMatcher(element.valueOf("@name"), ""); | private Matcher getMatcher(Element element) throws FilterException { // These will be either BugCode, Priority, Class, Method, Field, or Or elements. String name = element.getName(); if (name.equals("BugCode")) { return new BugCodeMatcher(element.valueOf("@name")); } else if (name.equals("BugPattern")) { retur... | 7352 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7352/3d4a2cdaca5ad0cc03498808071324c8df15b3b3/Filter.java/clean/findbugs/src/java/edu/umd/cs/findbugs/filter/Filter.java | [
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return jjStopAtPos(0, 28); | return jjStopAtPos(0, 29); | private final int jjMoveStringLiteralDfa0_0(){ switch(curChar) { case 33: jjmatchedKind = 37; return jjMoveStringLiteralDfa1_0(0x1000000000L); case 35: jjmatchedKind = 11; return jjMoveStringLiteralDfa1_0(0x500L); case 36: jjmatchedKind = 6; return jjMo... | 55820 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55820/b827d0bf89e728dc8324fc63c2ad3662c9d19cd3/ParserTokenManager.java/clean/src/java/org/apache/velocity/runtime/parser/ParserTokenManager.java | [
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saveEntry(entry); | entry.container.saveDockableWindow(entry.win); | public void removeDockableWindow(String name) { Entry entry = (Entry)windows.get(name); if(entry == null) throw new IllegalArgumentException("This DockableWindowManager" + " does not have a window named " + name); saveEntry(entry); entry.container.removeDockableWindow(entry.win); windows.remove(name); } | 6564 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6564/4322e592a252b85bde544e44b3b1592ffc24ec52/DockableWindowManager.java/buggy/org/gjt/sp/jedit/gui/DockableWindowManager.java | [
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return super.getName(methodName); } | return super.getName(methodName); } | protected Object getName(String methodName) { return super.getName(methodName); } | 6462 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6462/3566e1a7ad8b593e1e164b778b867ec924da1894/MarkupBuilder.java/clean/src/main/groovy/xml/MarkupBuilder.java | [
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protected synchronized void swapBuffers() throws GLException { | public synchronized void swapBuffers() throws GLException { | protected synchronized void swapBuffers() throws GLException { } | 46813 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46813/f90ab644c419486f7894fda3725a9c81de8bb283/WindowsOffscreenGLContext.java/clean/src/net/java/games/jogl/impl/windows/WindowsOffscreenGLContext.java | [
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log.error("-- GetStateEvent, cnt=" + cnt); | System.err.println("-- GetStateEvent, cnt=" + cnt); | public void recvLoop() throws Exception { Thread task = new Thread(new Runnable() { public void run() { Object tmp; while (! closed) { try { tmp = channel.receive(0); if (tmp instanceof ExitEvent) { ... | 3550 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3550/13de68466e3cf7fde6ee0bde0cee09a33e837e89/STATE_TRANSFER_Test.java/buggy/tests/junit/org/jgroups/protocols/STATE_TRANSFER_Test.java | [
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Iterator strings = os.iterator(runtime.getClasses().getStringClass()); | Iterator strings = os.iterator(runtime.getClass("String")); | public void testObjectSpace() { ObjectSpace os = new ObjectSpace(); IRubyObject o1 = runtime.newFixnum(10); IRubyObject o2 = runtime.newFixnum(20); IRubyObject o3 = runtime.newFixnum(30); IRubyObject o4 = runtime.newString("hello"); os.add(o1); os.add(o2); os.... | 50993 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50993/ca6b16e996ea9af83ce593594b9c69b9364a9924/TestObjectSpace.java/clean/test/org/jruby/test/TestObjectSpace.java | [
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if (orderedHaplos[i][j].getPercentage()*100 > dt){ | if (orderedHaplos[i][j].getPercentage()*100 > Options.getHaplotypeDisplayThreshold()){ | public void adjustDisplay(int dt){ //this is called when the controller wants to change the haps //displayed, instead of directly repainting so that none of this math //is done when the screen repaints for other reasons (resizing, focus change, etc) //first filter haps on displaythresh ... | 51222 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51222/f8f34aa4f0ace8092ba1fa18efb4d719ba00759a/HaplotypeDisplay.java/buggy/edu/mit/wi/haploview/HaplotypeDisplay.java | [
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out.println("rc += tightMarshalThrowable1(wireFormat, " + getter + ", bs);"); | out.println(" rc += tightMarshalThrowable1(wireFormat, " + getter + ", bs);"); | protected int generateTightMarshal1Body(PrintWriter out) { List properties = getProperties(); int baseSize = 0; for (Iterator iter = properties.iterator(); iter.hasNext();) { JProperty property = (JProperty) iter.next(); JAnnotation annotation = property.getAnnotation("ope... | 17032 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17032/cd0fb615deb6accf8dfdc07fbe58b53cf6b972a2/OpenWireJavaMarshallingScript.java/clean/activemq-core/src/gram/java/org/apache/activemq/openwire/tool/OpenWireJavaMarshallingScript.java | [
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System.setOut(console); System.setErr(console); | System.setOut(console); System.setErr(console); | public static void open(String consolePath) throws IOException { String pluginHome = System.getProperty("netscape.oji.plugin.home"); Properties props = loadProperties(pluginHome); boolean append = Boolean.valueOf(props.getProperty("netscape.oji.plugin.console.append")).booleanValue(); ... | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/d13cda72a38dba7f0427de2b0f79b81d41d9e273/MRJSession.java/buggy/plugin/oji/MRJCarbon/plugin/Source/MRJSession.java | [
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public FrameBodyTDRC(byte textEncoding, String text) | public FrameBodyTDRC() | public FrameBodyTDRC(byte textEncoding, String text) { super(textEncoding, text); this.setYear("2010"); } | 40452 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/40452/8e6062659057068b4b85fb7b41c567e179db6f7c/FrameBodyTDRC.java/buggy/src/org/jaudiotagger/tag/id3/framebody/FrameBodyTDRC.java | [
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((Axis) axes.get(i)).setPercent(true); | series.setStacked(true); | private Chart getConvertedChart(Chart currentChart, String sNewSubType, Orientation newOrientation, String sNewDimension) { Chart helperModel = (Chart) EcoreUtil.copy(currentChart); if((currentChart instanceof ChartWithAxes)) // Chart is ChartWithAxes { if(currentChart.getType().e... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/6bb323f181d48ff09735e3426faa8c503d1d7457/BarChart.java/buggy/chart/org.eclipse.birt.chart.ui.extension/src/org/eclipse/birt/chart/ui/swt/type/BarChart.java | [
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WorkbenchPlugin.log("Unable to create editor contributor: " + id, e.getStatus()); | IStatus status = StatusUtil.newStatus(e.getStatus(), "Unable to create editor contributor."); StatusManager.getManager().handle(status); | public IEditorActionBarContributor createActionBarContributor() { // Handle case for predefined editor descriptors, like the // one for IEditorRegistry.SYSTEM_INPLACE_EDITOR_ID, which // don't have a configuration element. if (configurationElement == null) { return null; ... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/35492165b8206aabe441da70f8f0c8802b959190/EditorDescriptor.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/registry/EditorDescriptor.java | [
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ParserRule rule = context.parent.rules.getEscapeRule(); | rule = context.parent.rules.getEscapeRule(); | private boolean checkDelegateEnd() { LineContext tempContext = context; context = context.parent; keywords = context.rules.getKeywords(); boolean tempEscaped = escaped; boolean b = handleRule(context.inRule,true); context = tempContext; keywords = context.rules.getKeywords(); if(b && !tempEscaped) { markKey... | 8690 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8690/d008ade0ae33b8d328650ef60052d224965f19b3/TokenMarker.java/clean/org/gjt/sp/jedit/syntax/TokenMarker.java | [
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throws IOException { final long offset; final PackedObjectReader objReader; | throws IOException { final long offset; final PackedObjectReader objReader; | public synchronized PackedObjectReader get(final ObjectId id) throws IOException { final long offset; final PackedObjectReader objReader; offset = findOffset(id); if (offset == -1) { return null; } packStream.position(offset); objReader = ... | 45532 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45532/a4e486719ce78b8050373e6534dfaf4a1572b269/PackReader.java/clean/org.spearce.jgit/src/org/spearce/jgit/lib/PackReader.java | [
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bugReporter.reportBug(new BugInstance(bugType, priority) | bugReporter.reportBug(new BugInstance(this, bugType, priority) | public void inspectResult(JavaClass javaClass, MethodGen methodGen, CFG cfg, Dataflow<ResourceValueFrame, ResourceValueAnalysis<Lock>> dataflow, Lock resource) { ResourceValueFrame exitFrame = dataflow.getResultFact(cfg.getExit()); int exitStatus = exitFrame.getStatus(); if (exitStatus == ... | 10715 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10715/471821a5392b2c785504cd8da1e82a1014496f4c/FindUnreleasedLock.java/buggy/findbugs/src/java/edu/umd/cs/findbugs/detect/FindUnreleasedLock.java | [
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case Wavelet.BIGPACKDATA: | case CompassMote.BIGPACKDATA: | public void messageReceived(int to, Message m) { UnicastPack pack = (UnicastPack) m; int id = pack.get_data_src(); if (id != owner.getID()) return; switch (pack.get_data_type()) { case Wavelet.BIGPACKHEADER: // If true, this is the initial request, else an ACK. if (!busy && pack.get_data_data_bpHeader_packT... | 52796 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52796/e4b1dd13d7bb52d8759a2c5fe719f1d893aa4897/Packer.java/clean/java/edu/rice/compass/bigpack/Packer.java | [
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private void analyzeMethod(ClassContext classContext, Method method) { try { PostDominatorsAnalysis postDominators = classContext.getNonImplicitExceptionDominatorsAnalysis(method); ValueNumberDataflow vnaDataflow = classContext.getValueNumberDataflow(method); CFG cfg = classContext.getCFG(method); Map<ValueNu... | 7352 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7352/13144ac671697df2b3df3012d7d9f8ecd00397cc/TrainUnconditionalDerefParams.java/clean/findbugs/src/java/edu/umd/cs/findbugs/detect/TrainUnconditionalDerefParams.java | [
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public ServerGame(GameData data, Set localPlayers, IServerMessenger messenger, Map remotePlayerMapping, IChannelMessenger channelMessenger, IRemoteMessenger remoteMessenger, IMessageManager messageManager) | public ServerGame(GameData data, Set localPlayers, IServerMessenger messenger, Map remotePlayerMapping, IChannelMessenger channelMessenger, IRemoteMessenger remoteMessenger) | public ServerGame(GameData data, Set localPlayers, IServerMessenger messenger, Map remotePlayerMapping, IChannelMessenger channelMessenger, IRemoteMessenger remoteMessenger, IMessageManager messageManager) { m_data = data; m_messenger = messenger; m_messageManager = messageManager; ... | 8339 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8339/94dcbc456ee416c732facb9e512450d43ee98531/ServerGame.java/clean/src/games/strategy/engine/framework/ServerGame.java | [
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if (item.indexOf('/') >= 0) type = CLDRFile.TZID; | if (item.indexOf('/') >= 0) type = CLDRFile.TZ_EXEMPLAR; | private static int getType(String item) { int type = CLDRFile.LANGUAGE_NAME; if (item.indexOf('/') >= 0) type = CLDRFile.TZID; // America/Los_Angeles else if (item.length() == 4) type = CLDRFile.SCRIPT_NAME; // Hant else if (item.charAt(0) <= '9') type = CLDRFile.TERRITORY_NAME; // 001 else if (item.charAt(0) < '... | 27800 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/27800/93c2c2a206a00b577feb6880bbe25f4be405e413/GenerateG2xG2.java/buggy/tools/java/org/unicode/cldr/tool/GenerateG2xG2.java | [
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public IASTSimpleTypeSpecifier createSimpleTypeSpecifier(IASTScope scope, Type kind, ITokenDuple typeName, boolean isShort, boolean isLong, boolean isSigned, boolean isUnsigned, boolean isTypename ) | public IASTSimpleTypeSpecifier createSimpleTypeSpecifier(IASTScope scope, Type kind, ITokenDuple typeName, boolean isShort, boolean isLong, boolean isSigned, boolean isUnsigned, boolean isTypename, boolean isComplex, boolean isImaginary ) | public IASTSimpleTypeSpecifier createSimpleTypeSpecifier(IASTScope scope, Type kind, ITokenDuple typeName, boolean isShort, boolean isLong, boolean isSigned, boolean isUnsigned, boolean isTypename ) { return new ASTSimpleTypeSpecifier( kind, typeName, isShort, isLong, isSigned, isUnsigned, isTypename ); ... | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/5be9f16c62f0d96b0b15c3ec0642ea39b98ee65b/QuickParseASTFactory.java/buggy/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/parser/ast/quick/QuickParseASTFactory.java | [
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try{ DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); DocumentBuilder builder = factory.newDocumentBuilder(); Document document = builder.newDocument(); Element instructions = root; if(input.equals("")){ debug.warn("No data provided to xmlify"); } else{ /*xxx not needed any more? Documen... | try{ DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); DocumentBuilder builder = factory.newDocumentBuilder(); Document document = builder.newDocument(); Element instructions = root; if(instructions == null) { debug.warn("No rules for xmlification"); return null; } if(input.equals("")){ debu... | public Document extractDomInfo(String input){ try{ //build a new document factory DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); DocumentBuilder builder = factory.newDocumentBuilder(); Document document = builder.newDocument(); Element instructions = r... | 14534 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14534/60812e245e541fc0ee6e310a9a669b4ebdd95844/Xmlifier.java/buggy/ep/transform/Xmlifier.java | [
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baos.close(); if (baosDebug != null) { | if (baos != null) baos.close(); if (baosDebug != null) | boolean doFETCH(String tag, String sequenceSet, int attributes, List<ImapPartSpecifier> parts, boolean byUID) throws IOException, ImapParseException { if (!checkState(tag, ImapSession.STATE_SELECTED)) return CONTINUE_PROCESSING; // 6.4.8: "However, server implementations MUST implicitly inc... | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/ecf5d48bac17375aad037ae7bce3658098876cc2/OzImapConnectionHandler.java/clean/ZimbraServer/src/java/com/zimbra/cs/imap/OzImapConnectionHandler.java | [
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MylarPlugin.getContextManager().addListener(uiUpdateManager); | UiExtensionPointReader.initExtensions(); MylarPlugin.getContextManager().addListener(uiUpdateManager); | public void run() { MylarPlugin.getContextManager().addListener(uiUpdateManager); Workbench.getInstance().getActiveWorkbenchWindow().getPartService().addPartListener(viewerConfigurator); IWorkbenchWindow[] windows= workbench.getWorkbenchWindows(); ... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/ffea9ed89adc29b1ae1184818ee9577e822d6fde/MylarUiPlugin.java/clean/org.eclipse.mylyn.context.ui/src/org/eclipse/mylyn/ui/MylarUiPlugin.java | [
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CTabItem item = getTab(oldPart); if (item == null) { return; } oldPart.setVisible(false); | CTabItem item = getTab(oldPart); if (item == null) { return; } oldPart.setVisible(false); | public void removePart(IPresentablePart oldPart) { if (current == oldPart) { titleLabel.setImage(null); current = null; } CTabItem item = getTab(oldPart); if (item == null) { return; } oldPart.setVisible(false); item.dispose(); //... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/38085a8072ad4fd21bad0983f8bc31ac736c9f72/R21BasicStackPresentation.java/buggy/bundles/org.eclipse.ui.presentations.r21/src/org/eclipse/ui/internal/presentations/R21BasicStackPresentation.java | [
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List nodes = xpath.selectNodes(dom4jDoc); | List foundNodes = xpath.selectNodes(dom4jDoc); | protected void initialise(UMOMessage message) { splitExpression = splitExpression.trim(); if (logger.isDebugEnabled()) { if (splitExpression.length() == 0) { logger.warn("splitExpression is not specified, no processing will take place"); } else { ... | 28323 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28323/65d774ee765ef057132d52265e50a7593c393b0c/FilteringXmlMessageSplitter.java/clean/src/java/org/mule/routing/outbound/FilteringXmlMessageSplitter.java | [
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public static Reader getStdInput() { | static public Reader getStdInput() { | public static Reader getStdInput() { return input; } | 14414 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14414/b9575731aa8c78d3dcdfc6f61ed88ee1fc0a482a/IO.java/buggy/cycmoo/lang/IO.java | [
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if (formats.length == 0) { pw.print(n); } else { int i; if (n == 0 && formats.length >= 3 && formats[2] != null) { i = 2; } else if (n < 0 && formats.length >= 2 && formats[1] != null) { n = -n; i = 1; } else { i = 0; } formats[i].format(n, pw); } } | if (formats.length == 0) { pw.print(n); } else { int i; if (n == 0 && formats.length >= 3 && formats[2] != null) { i = 2; } else if (n < 0 && formats.length >= 2 && formats[1] != null) { n = -n; i = 1; } else { i = 0; } formats[i].format(n, pw); } } | void format(double n, PrintWriter pw) { if (formats.length == 0) { pw.print(n); } else { int i; if (n == 0 && formats.length >= 3 && formats[2] != null) { i = 2; } else if (n < 0 && formats.length >= 2 && formats[1] != null) { n = -n; i = 1; } else { i = 0; ... | 37907 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/37907/b5b5168edc3af09cb74945a80b0c36e6630ed502/Format.java/clean/src/main/mondrian/util/Format.java | [
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public JavaScriptException(Object value) | public JavaScriptException(Object value, String sourceName, int lineNumber) | public JavaScriptException(Object value) { super(ScriptRuntime.toString(value)); this.value = value; } | 7555 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7555/965090841fd2987f6eeb940daa588522a6e3b6ff/JavaScriptException.java/clean/js/rhino/src/org/mozilla/javascript/JavaScriptException.java | [
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this.hierarchy = input; } | this.hierarchy = input; } | public void setHierarchy(Hierarchy input) throws OLAPException { this.hierarchy = input; } | 37907 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/37907/b5b5168edc3af09cb74945a80b0c36e6630ed502/MondrianHierarchyFilter.java/buggy/src/main/mondrian/jolap/MondrianHierarchyFilter.java | [
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throw new PortalException(e.getMessage(), e); | throw new PortalException(e); | public void setRuntimeData(ChannelRuntimeData rd) throws PortalException { this.runtimeData = rd; // internal state handling String action = runtimeData.getParameter("action"); if (action != null) { if (action.equals("edit")) { // this is an action from the initial profile listin... | 24959 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/24959/948a50c00c52659556ab3183d5ea2e316077d789/ManageProfilesState.java/buggy/source/org/jasig/portal/channels/UserPreferences/ManageProfilesState.java | [
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public TA_RetCode MINUS_DI( int startIdx, int endIdx, double inHigh[], double inLow[], double inClose[], int optInTimePeriod, MInteger outBegIdx, MInteger outNbElement, double outReal[] ){ int today, lookbackTotal, outIdx; double prevHigh, prevLow, prevClose; double prevMinusDM, prevTR; double tempReal, tempReal2, dif... | 51465 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51465/1a230e9b7099cbd2b7e9eb1294130ca009bfedf4/Core.java/buggy/trunk/ta-lib/java/src/TA/Lib/Core.java | [
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switch (methodId) { | switch (f.methodId) { | public Object execMethod (int methodId, IdFunction f, Context cx, Scriptable scope, Scriptable thisObj, Object[] args) throws JavaScriptException { if (prototypeFlag) { switch (methodId) { case Id_constructor: return jsConstructor(cx, scop... | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/8f28fc868ac3f30ea37494abfddb6358154786c3/NativeArray.java/buggy/js/rhino/src/org/mozilla/javascript/NativeArray.java | [
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void reset(int startLine, int lineCount) { int endLine = startLine + lineCount; if (startLine < 0 || endLine > lineWidth.length) return; for (int i = startLine; i < endLine; i++) { lineWidth[i] = -1; lineHeight[i] = -1; | void reset() { if (layouts != null) { for (int i = 0; i < layouts.length; i++) { TextLayout layout = layouts[i]; if (layout != null) layout.dispose(); } layouts = null; | void reset(int startLine, int lineCount) { int endLine = startLine + lineCount; if (startLine < 0 || endLine > lineWidth.length) return; for (int i = startLine; i < endLine; i++) { lineWidth[i] = -1; lineHeight[i] = -1; } if (startLine <= maxWidthLineIndex && maxWidthLineIndex < endLine) { maxWidth = 0; maxWidthLin... | 12413 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12413/8541553dadf05d49f0a2dbb7c8dd48ef34038820/StyledTextRenderer.java/buggy/bundles/org.eclipse.swt/Eclipse SWT Custom Widgets/common/org/eclipse/swt/custom/StyledTextRenderer.java | [
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if (method.isVarArgs()) return; | private void checkParametersNumber(final List<CandidateInfo> conflicts, final int argumentsCount) { boolean parametersNumberMatch = false; for (CandidateInfo info : conflicts) { if (info instanceof MethodCandidateInfo) { final PsiMethod method = ((MethodCandidateInfo)info).getElement(); if (m... | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/3314476891c70f6e28a00beba3f4835933188dec/JavaMethodsConflictResolver.java/buggy/source/com/intellij/psi/scope/conflictResolvers/JavaMethodsConflictResolver.java | [
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if (processingContext.getAxisOperation() != null && processingContext.getOperationContext() != null) { | if (processingContext.getAxisOperation() != null && processingContext.getOperationContext() != null) { | public MessageContext createFaultMessageContext(MessageContext processingContext, Throwable e) throws AxisFault { if (processingContext.isProcessingFault()) { // We get the error file processing the fault. nothing we can do throw new AxisFault(Messages.getMessage("errorwhileP... | 49300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49300/705f7ef2387f0c2e39cecfb67fe479112c48dd30/AxisEngine.java/buggy/modules/core/src/org/apache/axis2/engine/AxisEngine.java | [
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nonAutoActivateButton.setEnabled(isEditable()); | protected void createClient(Section section, FormToolkit toolkit) { initializeFonts(); Composite mainContainer = toolkit.createComposite(section); GridLayout layout = new GridLayout(); layout.marginHeight = layout.marginWidth = 2; layout.verticalSpacing = 10; mainContainer.setLayout(layout); mainContainer.set... | 14404 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14404/94a3cd05e7d4d18da04fefb83132edf7a57ca04f/OSGiSection.java/clean/ui/org.eclipse.pde.ui/src_Forms/org/eclipse/pde/internal/ui/neweditor/plugin/OSGiSection.java | [
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caOperations = CertDirectoryServiceFactory.getCertDirectoryServiceCAInstance( caPolicy.ldapType, caPolicy.ldapURL, support.getServiceBroker(), cadnname); | CertDirectoryServiceRequestor cdsr = new CertDirectoryServiceRequestorImpl(caPolicy.ldapURL, caPolicy.ldapType, support.getServiceBroker(), cadnname); caOperations = (CertDirectoryServiceCA) support.getServiceBroker().getService(cdsr, CertDirectoryServiceCA.class, null); | public void doPost (HttpServletRequest req, HttpServletResponse res) throws ServletException,IOException { PrintWriter out=res.getWriter(); res.setContentType("text/html"); String alias=req.getParameter("alias"); //String role=req.getParameter("role"); String cadnname=req.getParameter("cadnname");... | 12869 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12869/142369560e72a2158eb7bcb5ef783e21f556cbb8/ProcessPendingCertServlet.java/buggy/securityservices/src/org/cougaar/core/security/certauthority/servlet/ProcessPendingCertServlet.java | [
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if(generatedURI != null && !uri.equals(generatedURI)) Logger.error(this, "onGeneratedURI("+uri+","+state+") but already set generatedURI to "+generatedURI); generatedURI = uri; | synchronized(this) { if(generatedURI != null && !uri.equals(generatedURI)) Logger.error(this, "onGeneratedURI("+uri+","+state+") but already set generatedURI to "+generatedURI); generatedURI = uri; } | public void onGeneratedURI(FreenetURI uri, BaseClientPutter state) { if(generatedURI != null && !uri.equals(generatedURI)) Logger.error(this, "onGeneratedURI("+uri+","+state+") but already set generatedURI to "+generatedURI); generatedURI = uri; trySendGeneratedURIMessage(); } | 8026 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8026/2feef30f4266f2b8f54b92445661044a936a611a/ClientPut.java/buggy/src/freenet/node/fcp/ClientPut.java | [
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if (yESet) result.append(y); else result.append("<unset>"); | if (yESet) result.append(y); else result.append("<unset>"); | public String toString() { if (eIsProxy()) return super.toString(); StringBuffer result = new StringBuffer(super.toString()); result.append(" (x: "); if (xESet) result.append(x); else result.append("<unset>"); result.append(", y: "); if (yESet) result.append(y); else res... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/e5c78f0e8317166d02fa384e14c3dd7aa1796f2c/LocationImpl.java/clean/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/model/attribute/impl/LocationImpl.java | [
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filterEntries(); | filterEntries(); | public void propertyChange(PropertyChangeEvent e) { // FIXME: Multiple file selection waiting on JList multiple selection // bug. if (e.getPropertyName().equals( JFileChooser.SELECTED_FILE_CHANGED_PROPERTY)) { if (filechooser.getSelectedFile() == nul... | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/3826e72d9ebe31a854c4d01d6c8f1ec65a8d80fe/BasicFileChooserUI.java/buggy/core/src/classpath/javax/javax/swing/plaf/basic/BasicFileChooserUI.java | [
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queue = new int[n]; top = 0; | queue = new int[n]; top = 0; | public Frame[] analyze (final String owner, final MethodNode m) throws AnalyzerException { n = m.instructions.size(); indexes = new IntMap(2*n); handlers = new List[n]; frames = new Frame[n]; subroutines = new Subroutine[n]; queued = new boolean[n]; queue = new int[n]; top = 0; ... | 2697 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2697/5a4ae382e5048d91453ece2c63115d3356d8a60f/Analyzer.java/buggy/asm/src/org/objectweb/asm/tree/analysis/Analyzer.java | [
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public void remove (int Index) { svs.removeElementAt(Index); } | public void remove(int Index) { Preferences.getPreferances().getAccounts().removeAccount(Index); } | public void remove (int Index) { svs.removeElementAt(Index); } | 12376 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12376/b13c667b376deb4a8f2c235ffd847b57616d23c4/ServerArray.java/buggy/grendel/sources/grendel/prefs/base/ServerArray.java | [
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SetSplitter(DUPLICATE); | SetSplitter(DUPLICATE ()); | void Init(final int N, final int W) { Add(new SplitJoin() { public void Init() { SetSplitter(WEIGHTED_ROUND_ROBIN(N, N)); Add(new Filter() { public void InitIO () { input = new FloatChannel(); output = new FloatCh... | 5955 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5955/ca08101ccba65e529ef4dc89b5600373f939b218/radio.java/buggy/streams/library/radio.java | [
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index = indexForElement(widget,sorter,position, element,size); | lastInsertion = insertionPosition(items,sorter,lastInsertion, element); index = lastInsertion + i; | private void createAddedElements(Widget widget, Object[] elements) { if(elements.length == 1){ if (equals(elements[0], widget.getData())) return; } ViewerSorter sorter = getSorter (); Item[] items = null; if (sorter == null) { items = getChildren(widget); for (int i = 0; i < elements.length... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/dee7ced3518d5293cc6dc8052bea8d633d4f6834/AbstractTreeViewer.java/clean/bundles/org.eclipse.jface/src/org/eclipse/jface/viewers/AbstractTreeViewer.java | [
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if( !Class.forName( "org.apache.taglibs.display.ColumnDecorator" ).isAssignableFrom( c ) ) throw new JspException( "column decorator class is not a subclass of ColumnDecorator." ); | if (!Class.forName("org.apache.taglibs.display.ColumnDecorator").isAssignableFrom(c)) throw new JspException("column decorator class is not a subclass of ColumnDecorator."); | private ColumnDecorator loadColumnDecorator( String columnDecorator ) throws JspException { if( columnDecorator == null || columnDecorator.length() == 0 ) return null; try { Class c = Class.forName( columnDecorator ); // paulsenj - removed 'jakarta' from class name if( !Cl... | 7284 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7284/a71dc315013464c01719d449044bb7645788f6e6/TableTag.java/clean/_OLD/displaytag08/src/org/apache/taglibs/display/TableTag.java | [
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Object result = OptionPanel.confirm(InternalFramesUIProvider.this, "Really Close?", "Close Jin?", OptionPanel.OK); if (result == OptionPanel.OK) context.shutdown(); | context.quit(true); | public void actionPerformed(ActionEvent evt){ ConnectionManager connManager = context.getConnManager(); Object source = evt.getSource(); if (source == newConnection){ connManager.showNewConnectionUI(); } else if (source == closeConnection){ Object result = OptionPanel.OK; ... | 1161 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1161/afe73e9c1f241b80e8686da0a8fb1124cbd1a71e/InternalFramesUIProvider.java/buggy/src/free/jin/InternalFramesUIProvider.java | [
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path = PathUtil.append(getLocation().getPath(), path); | path = PathUtil.append(locationPath, PathUtil.encode(path)); | public String getFullPath(String path) { if (path != null && path.startsWith("/")) { if ("/".equals(path)) { return getRepositoryRoot(); } // assume it is full path in repository // prepend root only. return PathUtil.append(getReposit... | 2776 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2776/34dbf3ee287103c6a70361543b6f3ec2e1cb30d1/DAVRepository.java/clean/javasvn/src/org/tmatesoft/svn/core/internal/io/dav/DAVRepository.java | [
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Dimension result = new Dimension(d.width + arrowButtonWidth, d.height); return result; | cachedMinimumSize = new Dimension(d.width + arrowButtonWidth, d.height); isMinimumSizeDirty = false; } return new Dimension(cachedMinimumSize); | public Dimension getMinimumSize(JComponent c) { Dimension d = getDisplaySize(); int arrowButtonWidth = d.height; Dimension result = new Dimension(d.width + arrowButtonWidth, d.height); return result; } | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/e8a49a412752cdcc88a774cac2de160a23c6f550/BasicComboBoxUI.java/clean/core/src/classpath/javax/javax/swing/plaf/basic/BasicComboBoxUI.java | [
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{ return false; } | { return false; } | public boolean nullsAreSortedAtStart() throws SQLException { return false; } | 45672 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45672/6a061da272f04e1463864065f87f1f3fd61d6162/DatabaseMetaData.java/buggy/src/interfaces/jdbc/postgresql/DatabaseMetaData.java | [
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Logger.minor(this, "Memory in use at start: "+memUsedAtStart); | Logger.minor(this, "Memory in use at start: "+memUsedAtStart+" max="+Runtime.getRuntime().maxMemory()); | private void realEncode(SplitfileBlock[] dataBlockStatus, SplitfileBlock[] checkBlockStatus, int blockLength, BucketFactory bf) throws IOException { Runtime.getRuntime().gc(); Runtime.getRuntime().runFinalization(); Runtime.getRuntime().gc(); Runtime.getRuntime().runFinalization(); long memUsedAtStart = Runti... | 52909 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52909/b4ecaa4055b5835413830d4125c72de27d68e306/StandardOnionFECCodec.java/buggy/src/freenet/client/StandardOnionFECCodec.java | [
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path = (RubyString)getInstanceVariables().get("__classpath__"); | path = (RubyString)getInstanceVariables().get(getRuby().intern("__classpath__")); | public RubyString getClassname() { RubyString path = null; RubyModule rbModule = this; while (rbModule.isIncluded() || rbModule.isSingleton()) { rbModule = ((RubyClass)rbModule).getSuperClass(); } if (rbModule == null) { rbModule = getRuby().g... | 47984 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47984/8e00ad1c7ae96f50ae0bd521483380788f891b7b/RubyModule.java/clean/org/jruby/RubyModule.java | [
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public static void addBasicFormParameter(UIContainer local, String name, String value) { | public static void addBasicFormParameter(UIContainer local, UIParameter toadd) { | public static void addBasicFormParameter(UIContainer local, String name, String value) { UIForm enclosing = findBasicForm(local); if (enclosing == null) { throw new AssertionException("Component " + local.getFullID() + " has no form parent!"); } enclosing.parameters.add(new UIParameter(name, value));... | 49142 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49142/0d16571bffbf70e3da6ca6fd1bd477482f4bd48c/RSFUtil.java/buggy/src/uk/org/ponder/rsf/util/RSFUtil.java | [
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return RubyFixnum.newFixnum(getRuby(), end[(int) index.getValue()]); | return RubyFixnum.newFixnum(getRuby(), end[(int) index.getLongValue()]); | public RubyObject end(RubyFixnum index) { if (outOfBounds(index)) { return getRuby().getNil(); } return RubyFixnum.newFixnum(getRuby(), end[(int) index.getValue()]); } | 47273 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47273/786cea08c1dd2092a02d1254b49fbee371ace5f9/RubyMatchData.java/buggy/org/jruby/RubyMatchData.java | [
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} | } | private Chart getConvertedChart( Chart currentChart, String sNewSubType, String sNewDimension ) { Chart helperModel = (Chart) EcoreUtil.copy( currentChart ); // Cache series to keep attributes during conversion ChartCacheManager.getInstance( ) .cacheSeries( ChartUIUtil.getAllOrthogonalSeriesDefinitions( helper... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/4ce1e97aa23d1fe4046bd76743f3c5f90658bab6/MeterChart.java/buggy/chart/org.eclipse.birt.chart.ui.extension/src/org/eclipse/birt/chart/ui/swt/type/MeterChart.java | [
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"Pushing memebers down will result in them being deleted. Continue?"; | "Pushing members down will result in them being deleted. Continue?"; | protected boolean preprocessUsages(UsageInfo[][] usages) { final PushDownConflicts pushDownConflicts = new PushDownConflicts(myClass, myMemberInfos); pushDownConflicts.checkSourceClassConflicts(); if (usages[0].length == 0) { final String message = (myClass.isInterface() ? "Interface " : "Class ") ... | 56627 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56627/bfc1caad52cbd01a5a2db4075c90c83565f89b40/PushDownProcessor.java/clean/source/com/intellij/refactoring/memberPushDown/PushDownProcessor.java | [
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throw new NotImplementedException(invocation.invokedMethod.getName() + "called on " + name); | throw new NotImplementedException(invocation.invokedMethod.getName() + " called on " + name); | public Object invoke( Invocation invocation ) throws Throwable { throw new NotImplementedException(invocation.invokedMethod.getName() + "called on " + name); } | 57371 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57371/49a2f6dc030bdc74d12c8f8d35d01861ea94cf1a/Dummy.java/clean/jmock/core/src/org/jmock/util/Dummy.java | [
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cat.error(time.toGMTString() + ", " + LogEntry.MODULETEXTS[module] + ", " + LogEntry.EVENTNAMES_ERROR[event - LogEntry.EVENT_ERROR_BOUNDRARY] + ", Administrator : " + | log.error(time.toGMTString() + ", " + LogEntry.MODULETEXTS[module] + ", " + LogEntry.EVENTNAMES_ERROR[event - LogEntry.EVENT_ERROR_BOUNDRARY] + ", Administrator : " + | public void log(Admin admininfo, int module, Date time, String username, X509Certificate certificate, int event, String comment){ String user = "No User Involved"; String cert = "No Certificate Involved"; String admin = "Administrator not known"; if(username != null) ... | 4109 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4109/16e6a1dbcc54470e8d05f9bc7fdc7e7ebb6fe13c/Log4jLogDevice.java/clean/src/java/se/anatom/ejbca/log/Log4jLogDevice.java | [
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default : | default: | public static ServiceContext read(cdrInput istream) { int id = istream.read_ulong(); switch (id) { case cxCodeSet.ID : cxCodeSet codeset = new cxCodeSet(); codeset.readContext(istream); return codeset; default : ServiceContext ctx = new ServiceContext(); ... | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/031055047d52e1cffbe5de5ce0c7da51215e931f/ServiceContext.java/buggy/core/src/classpath/gnu/gnu/CORBA/GIOP/ServiceContext.java | [
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asm.emitSTW(S0, JNI_GLUE_FRAME_SIZE + JNI_GLUE_OFFSET_TO_PREV_JFRAME, FP); | asm.emitSTW(S0, glueFrameSize + JNI_GLUE_OFFSET_TO_PREV_JFRAME, FP); | public static void generateGlueCodeForJNIMethod(VM_Assembler asm, VM_Method mth) { int offset; asm.emitSTAddrU(FP,-JNI_GLUE_FRAME_SIZE,FP); // buy the glue frame // we may need to save CR in the previous frame also if CR will be used // CR is to be saved at FP+4 in the previous frame // Here we che... | 5245 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5245/b910a39ad6845b8a14a18f9fcf248a47452b8dc8/VM_JNICompiler.java/buggy/rvm/src/vm/arch/powerPC/jni/VM_JNICompiler.java | [
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return new PDBFormat(); } | return new PDBFormat(); } | public ChemFormat getFormat() { return new PDBFormat(); } | 45254 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45254/6fc05aca86d417eb218e45a23e409449083b6636/PDBReader.java/clean/src/org/openscience/cdk/io/PDBReader.java | [
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if(parent != null) { | if (parent != null) { | protected Object[] getChildren() { if(children != null) return children; Context cx = Context.enter(); try { Object value = getObject(); if(value == null) return children = empty; if(value == ScriptableObject.NOT_FOUND || value == Undefined.instanc... | 51996 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51996/b9766e81693411fa600b26b9a0763dcf621b2770/VariableModel.java/buggy/js/rhino/toolsrc/org/mozilla/javascript/tools/debugger/VariableModel.java | [
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boolean temp = true; | ArrayList edgesToRemove = new ArrayList(); GEStreamNode firstInPipe = (GEStreamNode) nodeList[0]; GEStreamNode finalInPipe = (GEStreamNode) nodeList[nodeList.length-1]; | public void expand(JGraph jgraph) { /* if(this.isInfoDisplayed) { Rectangle rect = GraphConstants.getBounds(this.attributes); this.frame.setLocation(new Point(rect.x, rect.y)); this.frame.setVisible(true); } else { this.frame.setLocation(GraphConstants.getOffset(this.attributes)); this.frame.setVisib... | 47772 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47772/7ace7a530da48c40374d9550f4f745b7a19df53e/GEPipeline.java/buggy/streams/src/streamit/eclipse/grapheditor/GEPipeline.java | [
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public short getWSFacet(){ | public short getWSFacet() { | public short getWSFacet(){ return fWhiteSpace; } | 4434 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4434/dc960568a2b05c8b317baf3a197b6e8f0928a2bf/StringDatatypeValidator.java/clean/src/org/apache/xerces/validators/datatype/StringDatatypeValidator.java | [
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