rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
|---|---|---|---|---|---|---|
pref.putBoolean(SHOWADVANCEDSETTINGS, showAdvancedSettingsBox.isSelected()); | PreferencesEntry.SHOWADVANCEDSETTINGS.setValue(getController(), showAdvancedSettingsBox.isSelected()); | public void save() { Preferences pref = getController().getPreferences(); // Write properties into core writeTrigger.triggerCommit(); // Set locale if (languageChooser.getSelectedItem() instanceof Locale) { Locale locale = (Locale) languageChooser.getSelectedItem(); ... | 51438 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51438/4990d958eaf34a7653f68f1002faf36b3aaa862b/GeneralSettingsTab.java/clean/src/main/de/dal33t/powerfolder/ui/preferences/GeneralSettingsTab.java | [
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throw new ParseException( "Content-Type not application/msword: "+contentType); | return new ParseStatus(ParseStatus.FAILED, ParseStatus.FAILED_INVALID_FORMAT, "Content-Type not application/msword: " + contentType).getEmptyParse(); | public Parse getParse(Content content) throws ParseException { // check that contentType is one we can handle String contentType = content.getContentType(); if (contentType != null && !contentType.startsWith("application/msword")) throw new ParseException( "Content-Type not application/msword: "+... | 57484 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57484/29bea6a24ea978596c3c1880a520b24bdeb2252d/MSWordParser.java/clean/src/plugin/parse-msword/src/java/org/apache/nutch/parse/msword/MSWordParser.java | [
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gcpG = new GCPoint(Convert.toDouble(parts[2]), Convert.toDouble(parts[3])); | gcpG = new GCPoint(Convert.toDouble(parts[3]), Convert.toDouble(parts[2])); | public boolean importMap(){ Extractor ext; String rawFileName = new String(); FileChooser fc = new FileChooser(FileChooser.DIRECTORY_SELECT, File.getProgramDirectory()); fc.addMask("*.png"); fc.setTitle((String)lr.get(4100,"Select Directory:")); if(fc.execute() != fc.IDCANCEL){ File inDir = fc.getChosenFile();... | 51026 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51026/39c46900ebba19c68621cdca63912a2190b0f811/Map.java/buggy/src/CacheWolf/Map.java | [
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IMethod primaryCandidate= JavaModelUtil.findMethod(getGetterName(field, EMPTY), new String[0], false, field.getDeclaringType()); | IMethod primaryCandidate= JavaModelUtil.findMethod(getGetterName(field, EMPTY, true), new String[0], false, field.getDeclaringType()); | public static IMethod getGetter(IField field) throws JavaModelException{ IMethod primaryCandidate= JavaModelUtil.findMethod(getGetterName(field, EMPTY), new String[0], false, field.getDeclaringType()); if (! JavaModelUtil.isBoolean(field) || (primaryCandidate != null && primaryCandidate.exists())) return primaryCa... | 9698 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9698/b4da61a3d57255f6e89b5cd1698b70f088958e3a/GetterSetterUtil.java/buggy/org.eclipse.jdt.ui/core extension/org/eclipse/jdt/internal/corext/codemanipulation/GetterSetterUtil.java | [
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MylarTaskListPlugin.setCurrentPriorityLevel(Task.PriorityLevel.P4); PRIORITY_FILTER.displayPrioritiesAbove(PRIORITY_LEVELS[3]); | MylarTaskListPlugin.setCurrentPriorityLevel(Task.PriorityLevel.P2); PRIORITY_FILTER.displayPrioritiesAbove(PRIORITY_LEVELS[1]); | public void run() { MylarTaskListPlugin.setCurrentPriorityLevel(Task.PriorityLevel.P4); PRIORITY_FILTER.displayPrioritiesAbove(PRIORITY_LEVELS[3]); getViewer().refresh(); } | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/6740590a4c4acd414bc94a9174b5cca97c99d56b/TaskListView.java/clean/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/internal/tasklist/ui/views/TaskListView.java | [
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if (isInitNameChar(content.charAt(0))) { for (int i = 1; i < len; i++) { if (!isNameChar(content.charAt(i))) { seenErr = true; break; } } } else { seenErr = true; } | seenErr = !XMLCharacterProperties.validName(content); | protected static void validateToken(String tokenType, String content) throws InvalidDatatypeValueException { int len; if (content == null || (len = content.length()) == 0) { throw new InvalidDatatypeValueException("The length of the content must be greater than 0"); } boolean ... | 4434 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4434/8426e76c1efaf189a0a808a432c7029bbddbca04/AbstractStringValidator.java/buggy/src/org/apache/xerces/validators/datatype/AbstractStringValidator.java | [
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if ( ( factory == null && cssRule.getType() == CSSRule.STYLE_RULE ) || | if ( /*( factory == null && cssRule.getType() == CSSRule.STYLE_RULE ) ||*/ | public static Iterator fromCSSPropertyDecl( CSSRule cssRule, CSSStyleDeclaration style, String propName, int sequence ) { // HACK: special cases for RuleNormalizer...need to work this out cleanly PropertyFactory factory = (PropertyFactory)PRP_FACTORIES.get( propName ); if ( ( factory == null &&... | 8125 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8125/303478cb2d50ec8a2e30b215b0e54607a0ae9a68/XRPropertyImpl.java/clean/src/java/org/xhtmlrenderer/css/impl/XRPropertyImpl.java | [
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add(new CharGenerator("Hello World2!")); add(new SplitJoin() | this.add(new CharGenerator("Hello World2!")); this.add(new SplitJoin() | public void init() { add(new CharGenerator("Hello World2!")); add(new SplitJoin() { public void init() { setSplitter(ROUND_ROBIN ()); add(new Identity (Character.TYPE)); add(new Identity (Character.TYPE)); setJ... | 5955 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5955/1537aac832f399becfeb312d0251fb8431191491/HelloWorld2.java/clean/streams/apps/tests/hello-splits/HelloWorld2.java | [
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Bundle b = m_context.installBundle(tabBundle); b.start(); System.out.println(msg+" Bundle started"); | Bundle b = m_context.installBundle(tabBundle); b.start(); System.out.println(" - Bundle started: \""+name.toString()+"\" - "+tabBundle); | public void propertyChange(PropertyChangeEvent event) { if (event.getPropertyName().equals(Plugin.PLUGIN_ADDED)) { Plugin cp=(Plugin) event.getNewValue(); this.add(cp.getName(), cp.getGUI()); System.out.println("Add gui \""+cp.getName()+"\" into NodePanel"/*+" :: "+cp.getGUI()*/); this.a.... | 45948 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45948/ba1be79cba7fef5ae7fca4aac5fd530bdea243f5/NodePanel.java/buggy/mosgi.console.gui/src/main/java/org/apache/felix/mosgi/console/gui/NodePanel.java | [
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String[] files = PluginUtils.findSources( sourceDir, "**/*.mmld" ); | ClassLoader oldCl = Thread.currentThread().getContextClassLoader(); try { Thread.currentThread().setContextClassLoader(MarmaladeMojoDescriptorExtractor.class.getClassLoader()); String[] files = PluginUtils.findSources( sourceDir, "**/*.mmld" ); | public Set execute( String sourceDir, MavenProject project ) throws Exception { String[] files = PluginUtils.findSources( sourceDir, "**/*.mmld" ); Set descriptors = new HashSet(); File dir = new File( sourceDir ); for ( int i = 0; i < files.length; i++ ) { String fi... | 11530 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11530/95d01ff57237629f48cc62e515ebc75aff870cc6/MarmaladeMojoDescriptorExtractor.java/clean/maven-plugin-tools/maven-plugin-tools-marmalade/src/main/java/org/apache/maven/tools/plugin/extractor/marmalade/MarmaladeMojoDescriptorExtractor.java | [
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public SimpleCycleBasis (UndirectedGraph graph) { this.cycles = new ArrayList(); this.edgeList = new ArrayList(); | public SimpleCycleBasis (List cycles, List edgeList, UndirectedGraph graph) { this.edgeList = edgeList; this.cycles = cycles; | public SimpleCycleBasis (UndirectedGraph graph) { this.cycles = new ArrayList(); this.edgeList = new ArrayList(); this.graph = graph; createMinimalCycleBase(); } | 45167 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45167/377171c5907bab11cc813de19845b0f9ae108f55/SimpleCycleBasis.java/buggy/src/org/openscience/cdk/ringsearch/cyclebasis/SimpleCycleBasis.java | [
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readyToRun = false; blackboard.closeTransaction(); primed = true; | readyToRun = false; } catch (Throwable t) { System.err.println("Error: Uncaught exception in "+this+": "+t); t.printStackTrace(); } finally { blackboard.closeTransaction(); primed = true; } | protected void precycle() { blackboard.openTransaction(); setupSubscriptions(); // run execute here so subscriptions don't miss out on the first // batch in their subscription addedLists execute(); readyToRun = false; // don't need to run execute again blackboard.closeTransaction(); p... | 7981 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7981/baf5f99723f9a67c04d9aceb95c9c025ae9033c8/ComponentPlugin.java/buggy/core/src/org/cougaar/core/plugin/ComponentPlugin.java | [
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log.debug(fullName); | getLogger().debug(fullName); | protected final boolean checkTTC(FontFileReader in, String name) throws IOException { String tag = in.readTTFString(4); if ("ttcf".equals(tag)) { // This is a TrueType Collection in.skip(4); // Read directory offsets int numDirectories = (int)in.readTTFULong... | 5268 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5268/2e2226dd0dd6733fdab0c36331723114a46eddd8/TTFFile.java/buggy/src/org/apache/fop/fonts/TTFFile.java | [
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return false; | return otherValue.equals(myValue); | public boolean equal(org.omg.CORBA.Any any) { if (any == null) { throw new BAD_PARAM ("Null passed to Any equal operation"); } if (!typeCode.equal (any.type())) { return false; } int kind = originalType().kind().value(); switch (kind) ... | 46355 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46355/dcd731487996f10323f454bdda69836e266fc67f/Any.java/buggy/src/org/jacorb/orb/Any.java | [
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} | } | public byte [] getSourceBytes(){ byte [] result = null; myFactory.throwExceptionIfNotInitialized(); String HTMLContent = new String(); String currURL = getCurrentURL(); System.out.println("\nThe Current URL is -- " + currURL); try { URL aURL = new URL(currURL); URLConnection conn... | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/afee19ff581e3d13844917014bf035cd25e515ae/CurrentPageImpl.java/buggy/java/webclient/classes_spec/org/mozilla/webclient/wrapper_native/CurrentPageImpl.java | [
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String value = randomValueForSetter(); | String value = "\"" + randomValueForDbUnit() + "\""; | public String formSetterWithValue() throws XDocletException { XMethod method = super.getCurrentMethod(); XMethod setter = method.getMutator(); String value = randomValueForSetter(); if (setter.getPropertyType().getType().isA("java.util.Date")) { value = "\"" + getDate(new Date... | 3521 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3521/1596a9e2151b45f8d8b68dc66bbab6cc9bfd0ea4/MethodExTagsHandler.java/clean/extras/appgen/src/org/example/antbook/xdoclet/MethodExTagsHandler.java | [
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fErrorHandler.handleError(error); | fErrorHandler.getErrorHandler().handleError(error); | XMLInputSource dom2xmlInputSource (LSInput is) { // need to wrap the LSInput with an XMLInputSource XMLInputSource xis = null; // check whether there is a Reader // according to DOM, we need to treat such reader as "UTF-16". if (is.getCharacterStream () != null) { xis =... | 6373 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6373/057f39ad905b6f8c6a6864e0591a9ba69d0ea78c/DOMParserImpl.java/buggy/src/org/apache/xerces/parsers/DOMParserImpl.java | [
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tooltip.setVisible(false); ListIterator li = actionList.listIterator(0); ActionListener al; while (li.hasNext()) { al = (ActionListener) li.next(); al.actionPerformed(new ActionEvent(e.getSource(), ActionEvent.ACTION_PERFORMED, "PressAction", e.getWhen(), 0)); } | if(tooltip != null) tooltip.setVisible(false); SwingUtilities.invokeLater(new Runnable(){ public void run() { Thread actionThread = new Thread(new Runnable(){ public void run() { ListIterator li = actionList.listIterator(0); while (li.hasNext()) { ActionListener al; al = (ActionListener) li.next(); al.actionPerformed(n... | void mousePressed(MouseEvent e) { if (menu != null) { if (e.isPopupTrigger()) { tooltip.setVisible(false); Dimension d = menu.getPreferredSize(); Dimension s = Toolkit.getDefaultToolkit().getScreenSize(); Point p = e.getPoint(); ... | 4416 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4416/f2a6ecf973acf6bbc0afbdbdec2eb8eec0112ce4/GnomeTrayIconService.java/buggy/src/jdic/src/unix/classes/org/jdesktop/jdic/tray/internal/impl/GnomeTrayIconService.java | [
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boolean reverse) { int fill = points.length; for (int i = 0; i < points.length / 2; i++) { if (!reverse) { shape[index++] = x + points[2 * i]; shape[index++] = y + points[2 * i + 1]; } else { shape[index + fill - 2 - 2 * i] = x + points[2 * i]; shape[index + fill - 1 - 2 * i] = y + points[2 * i + 1]; } } if (reverse) {... | boolean reverse) { int fill = points.length; for (int i = 0; i < points.length / 2; i++) { if (!reverse) { shape[index++] = x + points[2 * i]; shape[index++] = y + points[2 * i + 1]; } else { shape[index + fill - 2 - 2 * i] = x + points[2 * i]; shape[index + fill - 1 - 2 * i] = y + points[2 * i + 1]; } } if (reverse) {... | private int fillShape(int[] shape, int[] points, int index, int x, int y, boolean reverse) { int fill = points.length; for (int i = 0; i < points.length / 2; i++) { if (!reverse) { shape[index++] = x + points[2 * i]; shape[index++] = y + points[2 * i + 1]; } else { shape[index + fill - 2 - 2 * i] = x ... | 13822 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13822/1b18c4111a9bdd6d059092d4cb5971693a9544b2/IntroLaunchBar.java/clean/org.eclipse.ui.intro/src/org/eclipse/ui/internal/intro/impl/presentations/IntroLaunchBar.java | [
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log.error("***** Draw.run(): received invalid draw command " + comm.mode); | System.err.println("***** Draw.run(): received invalid draw command " + comm.mode); | public void mainLoop() { Object tmp; Message msg=null; DrawCommand comm; boolean fl=true; while(fl) { try { tmp=channel.receive(0); if(tmp == null) continue; if(tmp instanceof View) { View ... | 3550 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3550/13de68466e3cf7fde6ee0bde0cee09a33e837e89/Draw.java/buggy/src/org/jgroups/demos/Draw.java | [
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Node testNode2Session2 = (Node) session2.getItem(testNode2Session1.getPath()); | try { Node testNode2Session2 = (Node) session2.getItem(testNode2Session1.getPath()); | public void testRefreshBooleanTrue() throws RepositoryException { // get default workspace test root node using superuser session Node defaultRootNode = (Node) superuser.getItem(testRootNode.getPath()); // create a node Node testNode1Session1 = defaultRootNode.addNode(nodeName1, testNode... | 49304 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49304/5ccda17da27a5f4b68cd1402b8d936c724c7aa46/NodeTest.java/buggy/src/test/org/apache/jackrabbit/test/api/NodeTest.java | [
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SocketAppender(String host, int port) { this.port = port; this.address = getAddressByName(host); this.remoteHost = host; connect(address, port); | public SocketAppender() { | SocketAppender(String host, int port) { this.port = port; this.address = getAddressByName(host); this.remoteHost = host; connect(address, port); } | 45952 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45952/1134214910cde23075dafa03ee90fde97a5223c7/SocketAppender.java/buggy/src/java/org/apache/log4j/net/SocketAppender.java | [
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catch (InvocationTargetException e) { if (e.getTargetException() instanceof CoreException) throw (CoreException) e.getTargetException(); if (e.getTargetException() instanceof RuntimeException) throw (RuntimeException) e.getTargetException(); if (e.getTargetException() instanceof Error) throw (Error) e.getTargetExceptio... | protected void execute(IProgressMonitor monitor) throws CoreException, InterruptedException { try { content.run(monitor); } catch (InvocationTargetException e) { if (e.getTargetException() instanceof CoreException) throw (CoreException) e.getTargetException(); if (e.getTargetException() instanceof RuntimeException... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/7b50a348ec9564b04f52eb73450ed9b2ffddff74/WorkspaceModifyDelegatingOperation.java/clean/bundles/org.eclipse.ui.ide/extensions/org/eclipse/ui/actions/WorkspaceModifyDelegatingOperation.java | [
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this.clipboard = clipboard; } | this.clipboard = clipboard; } | void setClipboard(Clipboard clipboard) { this.clipboard = clipboard; } | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/cd30df30dfb88f9bda2fa203f31e3dd26ff697b7/ActionCopyMarker.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/views/markers/internal/ActionCopyMarker.java | [
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AspectJPreferences.setAJDTPrefConfigDone(true); | public void testWithOutJarSwitch3() throws Exception { AspectJPreferences.setAJDTPrefConfigDone(true); IProject projectY = Utils.getPredefinedProject("project.java.Y", true); projectY.build(IncrementalProjectBuilder.FULL_BUILD, null); ProjectDependenciesUtils.waitForJobsToComplete(projectY); IProject projectX = U... | 13558 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13558/1de3a7ddee14a9331ea7bdbd6a2e8b21cdc4019d/ProjectDependenciesWithJarFilesTest.java/clean/org.eclipse.ajdt.ui.tests/src/org/eclipse/ajdt/internal/builder/ProjectDependenciesWithJarFilesTest.java | [
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String keyPass = props.getProperty(prop, ""); | String keyPass = Preferences.getPreference(prop, ""); | private void configureHTTPClient(Properties props) { HTTPClientFactory factory = HTTPClientFactory.getInstance(); String prop = null; String value; int colon; try { // FIXME for some reason, we get "" instead of null for value, // and do not use our default value??... | 31053 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/31053/a5906aa3ab3214cfaa5b20624c4421944b454f3c/Framework.java/clean/src/org/owasp/webscarab/plugin/Framework.java | [
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rewrite.markAsReplaced(ifStatement.getElseStatement(), newElseBlock); | rewrite.markAsReplaced(ifStatement.getElseStatement(), newElseBlock, null); | public void testIfStatementReplaceElse3() throws Exception { IPackageFragment pack1= fSourceFolder.createPackageFragment("test1", false, null); StringBuffer buf= new StringBuffer(); buf.append("package test1;\n"); buf.append("public class E {\n"); buf.append(" public void foo() {\n"); buf.append(" if (... | 9698 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9698/57e3aa581b2bf9d9c15ee310aa69c71cec638595/ASTRewritingStatementsTest.java/clean/org.eclipse.jdt.ui.tests/ui/org/eclipse/jdt/ui/tests/astrewrite/ASTRewritingStatementsTest.java | [
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if (directoryNames == null) directoryNames = new String[0]; | if (directoryNames == null) { directoryNames = new String[0]; } | protected void internalSaveWidgetValues() { // update directory names history IDialogSettings settings = getDialogSettings(); if (settings != null) { String[] directoryNames = settings .getArray(STORE_DESTINATION_NAMES_ID); if (directoryNames == null) ... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/WizardArchiveFileResourceExportPage1.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/wizards/datatransfer/WizardArchiveFileResourceExportPage1.java | [
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if (TDEBUG) trace(IN, "blockDecrypt("+in+", "+inOffset+", "+sessionKey+")"); | if (TDEBUG) trace(IN, "blockDecrypt("+in+", "+inOffset+", "+sessionKey+ ')'); | blockDecrypt (byte[] in, byte[] result, int inOffset, Object sessionKey) {if (TDEBUG) trace(IN, "blockDecrypt("+in+", "+inOffset+", "+sessionKey+")"); Object[] sk = (Object[]) sessionKey; // extract S-box and session key int[] sBox = (int[]) sk[0]; int[] sKey = (int[]) sk[1];if (TDEBUG && (debuglevel ... | 45341 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45341/62fd59041864b4ed1f43adc676de6bfb5ea977f3/Twofish_Algorithm.java/clean/src/freenet/crypt/ciphers/Twofish_Algorithm.java | [
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setOnclick((String) evalAttr("onclick", getOnclick(), | setOnclick((String) evalAttr("onclick", getOnclickExpr(), | private void evaluateExpressions() throws JspException { try { setAlt((String) evalAttr("alt", getAlt(), String.class)); } catch (NullAttributeException ex) { setAlt(null); } try { setAltKey((String) evalAttr("altKey", getAltKey(), String.class)); ... | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/db064e19656421b94aaf753550935d95f44bd5f9/ELSelectTag.java/buggy/contrib/struts-el/src/share/org/apache/strutsel/taglib/html/ELSelectTag.java | [
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public ASTNode processRange(ASTNode element, int startOffset, int endOffset) { FileType fileType = myHelper.getFileType(); if (useNewFormatter(fileType)) { PseudoTextBuilder pseudoTextBuilder = ((LanguageFileType)fileType).getLanguage().getFormatter(); if (pseudoTextBuilder == null) { return el... | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/684e19353819557fb6e0c3dcd127af4d3a5851d8/CodeFormatterFacade.java/buggy/source/com/intellij/psi/impl/source/codeStyle/CodeFormatterFacade.java | [
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Utilities.invokeAndWait(new SRunnable() { | if (! projDocs.isEmpty()) Utilities.invokeAndWait(new SRunnable() { | private File[] _loadProject(ProjectFileIR ir, File projectFile) throws IOException { final DocFile[] srcFiles = ir.getSourceFiles(); final DocFile[] auxFiles = ir.getAuxiliaryFiles(); final File buildDir = ir.getBuildDirectory(); final File workDir = ir.getWorkingDirectory(); final File mainClass =... | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/4e9024f79382344df7a15499ea8826062a420a5f/AbstractGlobalModel.java/clean/drjava/src/edu/rice/cs/drjava/model/AbstractGlobalModel.java | [
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case Token.REF_CALL : | private static void dumpICode(InterpreterData idata) { if (!Token.printICode) { return; } int iCodeLength = idata.itsICodeTop; byte iCode[] = idata.itsICode; String[] strings = idata.itsStringTable; PrintStream out = System.out; out.println("ICode dump,... | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/455f6bfb19128ad0a276b4b3c1f15ede63a2041d/Interpreter.java/buggy/src/org/mozilla/javascript/Interpreter.java | [
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while (termDocs.next()) { retArray[termDocs.doc()] = termval; | while (termDocs.next ()) { retArray[termDocs.doc ()] = termval; | static ScoreDocLookupComparator comparator (final IndexReader reader, final TermEnum enumerator, final String field) throws IOException { return new ScoreDocLookupComparator () { protected final float[] fieldOrder = generateSortIndex(); protected final float[] generateSortIndex() throws IOException { float[]... | 1514 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1514/60f1d192c7fe49cba55432569ed988099f4de5e4/FloatSortedHitQueue.java/buggy/src/java/org/apache/lucene/search/FloatSortedHitQueue.java | [
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decorator.addListener(WorkbenchPlugin.getDefault().getDecoratorManager()); | decorator.addListener( WorkbenchPlugin.getDefault().getDecoratorManager()); | protected ILabelDecorator internalGetDecorator() throws CoreException { if (labelProviderCreationFailed) return null; final CoreException[] exceptions = new CoreException[1]; if (decorator == null) { Platform.run(new SafeRunnable(WorkbenchMessages.format("DecoratorManager.ErrorActivatingDecorator", new String[]... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/271b6be5e51f33ef04581c15caa1b63347dc0f14/FullDecoratorDefinition.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/decorators/FullDecoratorDefinition.java | [
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if (!isUseServantManager()) throw new WrongPolicy(); | if (!isUseServantManager()) throw new WrongPolicy(); | public void set_servant_manager(org.omg.PortableServer.ServantManager servant_manager) throws WrongPolicy { // Debug.output(Debug.POA | Debug.DEBUG1, "Poa.set_servant_manager <" + // _getQualifiedName() + ">." ); checkDestructionApparent (); if (!isUseServant... | 46355 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46355/a74dc4ac69615c8e503cb9145c3594f1702d4c75/POA.java/buggy/src/org/jacorb/poa/POA.java | [
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Currency newCurrency = (Currency) cache.get(currencyCode); if (newCurrency == null) | /* Attempt to get the currency from the cache */ String code = (String) countryMap.get(country); if (code == null) | public static Currency getInstance(String currencyCode) { Locale[] allLocales; /* * Throw a null pointer exception explicitly if currencyCode is null. * One is not thrown otherwise. It results in an IllegalArgumentException. */ if (currencyCode == null) { throw new NullPointer... | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/53b78dd1e4587254262f4618d2aa7551de8e0cbf/Currency.java/buggy/core/src/classpath/java/java/util/Currency.java | [
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artifactList = repoSearcher.search( qry ); | artifactList = repoSearchLayer.searchAdvanced( qry ); | public void testSearchSingle() throws Exception { createTestIndex(); RepositoryIndexingFactory factory = (RepositoryIndexingFactory) lookup( RepositoryIndexingFactory.ROLE ); PomRepositoryIndex indexer = factory.createPomRepositoryIndex( indexPath, repository ); RepositoryIndex... | 28441 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28441/edd8a998aa6006fddaf4d4a404bbdd6ddfd246d7/PomRepositoryIndexingTest.java/clean/maven-repository-indexer/src/test/java/org/apache/maven/repository/indexing/PomRepositoryIndexingTest.java | [
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throw new ArgumentError(runtime, "wrong number of arguments"); | throw runtime.newArgumentError("wrong number of arguments"); | public static IRubyObject raise(IRubyObject recv, IRubyObject[] args) { // FIXME special case in ruby // recv.checkArgumentCount(args, 0, 2); Ruby runtime = recv.getRuntime(); RubyString string = null; RubyException excptn = null; switch (args.length) { cas... | 47619 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47619/870e1da9b41bfdbae259e1fc5f18fc8b76686998/RubyKernel.java/buggy/src/org/jruby/RubyKernel.java | [
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int _m488 = mark(); synPredMatched488 = true; | int _m489 = mark(); synPredMatched489 = true; | public final void mNEXT_TOKEN(boolean _createToken) throws RecognitionException, CharStreamException, TokenStreamException { int _ttype; Token _token=null; int _begin=text.length(); _ttype = NEXT_TOKEN; int _saveIndex; Token ncname=null; switch ( LA(1)) { case '{': { mLCURLY(false); if ( inputState.guessi... | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/10544e5ec103a411822c6180ed81ef38eab15de8/XQueryLexer.java/clean/src/org/exist/xquery/parser/XQueryLexer.java | [
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updateDescription(); } | updateDescription(); } | public void widgetDefaultSelected(SelectionEvent e) { updateDescription(); } | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/901694a204e2e98a8a01b05f67351a3c900227dc/WizardPreferencesPage.java/clean/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/wizards/preferences/WizardPreferencesPage.java | [
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+ " and coGene.products.id=coBs2gp.geneProduct.id " | + " and coGene.products.id=coBs2gp.geneProduct.id " | protected Object handleGetCoexpressedGenes( Gene gene, Collection ees, Integer stringency ) throws Exception { Gene givenG = gene; long id = givenG.getId(); String p2pClassName; if (TaxonUtility.isHuman(givenG.getTaxon())) p2pClassName = "HumanProbeCoExpressionImpl"; ... | 4335 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4335/71d023ff940a83104d33a0ec7a241d4b25474a37/GeneDaoImpl.java/clean/gemma-mda/src/main/java/ubic/gemma/model/genome/GeneDaoImpl.java | [
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table.getCell( 4, 1 ).getContent( ).add( data ); | table.getCell( GroupHandle.FOOTER_SLOT, 1, 1, 1 ).getContent( ).add( data ); | public void testBoundColumnWithGroup( ) throws Exception { createDesign( ); TableHandle table = designHandle.getElementFactory( ).newTableItem( "table1", 3 ); //$NON-NLS-1$ designHandle.getBody( ).add( table ); TableGroupHandle group = designHandle.getElementFactory( ) .newTableGroup( ); group.getFooter( ).... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/de4e32d64d24337e8801521456bb895f21408aa9/APICompatibleTest.java/clean/model/org.eclipse.birt.report.model.tests/test/org/eclipse/birt/report/model/api/APICompatibleTest.java | [
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public static Object getProperty(Map props, Object key, Object defaultValue) { | public static Object getProperty(Map props, Object key, Object defaultValue) { | public static Object getProperty(Map props, Object key, Object defaultValue) { if (props == null) { return defaultValue; } Object temp = props.get(key); if (temp == null) { temp = defaultValue; } return temp; } | 28323 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28323/5c7badd7924d8f30223c81136f63117d913be921/PropertiesHelper.java/clean/src/java/org/mule/util/PropertiesHelper.java | [
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if ( ( sNewSubType.equalsIgnoreCase( "Stacked" ) || sNewSubType.equalsIgnoreCase( "Percent Stacked" ) ) ) | if ( ( sNewSubType.equalsIgnoreCase( STACKED_SUBTYPE_LITERAL) || sNewSubType.equalsIgnoreCase( PERCENTSTACKED_SUBTYPE_LITERAL ) ) ) | private Chart getConvertedChart( Chart currentChart, String sNewSubType, Orientation newOrientation, String sNewDimension ) { Chart helperModel = (Chart) EcoreUtil.copy( currentChart ); ChartDimension oldDimension = currentChart.getDimension( ); if ( ( currentChart instanceof ChartWithAxes ) ) { if ( currentCh... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/ae5c99c975d28a2277f3b75baa2207ddf1c0d0ae/LineChart.java/clean/chart/org.eclipse.birt.chart.ui.extension/src/org/eclipse/birt/chart/ui/swt/type/LineChart.java | [
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public Context createSubcontext( Name name ) throws NamingException | public Context createSubcontext( String name ) throws NamingException | public Context createSubcontext( Name name ) throws NamingException { /* * Start building the server side attributes to be added directly to * the backend. * * The RDN from name can be a multivalued RDN based on more than one * attribute using the '+' AVA concaten... | 17035 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17035/0132d1f6fc999a40038ffa4e9d000e622b4e44d4/EveContext.java/buggy/jndi-provider/src/java/org/apache/eve/jndi/EveContext.java | [
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otherMock.stubs().method("hello").id(priorCall); mock.stubs().method("goodbye").after(otherMock, priorCall); | otherMock.stubs().method("hello").id(priorCall); mock.stubs().method("goodbye").after(otherMock, priorCall); | public void testDetectsUnexpectedOrderOverDifferentMocks() { String otherMockName = "otherMock"; String priorCall = "HELLO-CALL-ID"; Mock otherMock = mock(ExampleInterface.class, otherMockName); otherMock.stubs().method("hello").id(priorCall); mock.stubs().method("goodbye").after(otherMock, priorCall); try { p... | 57371 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57371/c26c57f3ac4851e6bc9c5df8515ac73f4045eebf/OrderedInvocationsAcceptanceTest.java/buggy/jmock/core/acceptance-tests/atest/jmock/OrderedInvocationsAcceptanceTest.java | [
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return RubyFixnum.zero(runtime); | return RubyFixnum.zero(getRuntime()); | public RubyFixnum op_cmp(IRubyObject other) { long millis = getTimeInMillis(); if (other instanceof RubyFloat || other instanceof RubyBignum) { double time = millis / 1000.0; double time_other = ((RubyNumeric) other).getDoubleValue(); if (time > time_other) { ... | 50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/870e1da9b41bfdbae259e1fc5f18fc8b76686998/RubyTime.java/clean/src/org/jruby/RubyTime.java | [
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public boolean performFinish() { queryPage.getQueryDialog().okPressed(); final BugzillaRepositoryQuery queryCategory = new BugzillaRepositoryQuery( repository.getUrl(), queryPage.getQueryDialog().getUrl(), queryPage.getQueryDialog().getName(), queryPage.getQueryDialog().getMaxHits(), MylarTaskList... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/36f9c08d02fadb543a4958543b208eb8fbe9398f/NewBugzillaQueryWizard.java/clean/org.eclipse.mylyn.bugzilla.ui/src/org/eclipse/mylyn/internal/bugzilla/ui/tasklist/NewBugzillaQueryWizard.java | [
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System.err.println("DOM: status URL load - " + | System.err.println(prefix + " :status URL load - " + | public void statusURLLoad(String url, String message, Document doc) { if (debug) System.err.println("DOM: status URL load - " + url.toString() + " (" + message + ")"); } | 12376 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12376/d5d632bf9df2e7c37640ec01b53cc4d876888be9/TestDocLoadListener.java/clean/java/dom/tests/src/TestDocLoadListener.java | [
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log(aBrace.getLineNo(), aBrace.getColumnNo(), "'{' should be on a new line."); | log(aBrace.getLineNo(), aBrace.getColumnNo(), "line.new", "{"); | private void checkLCurly(int aStartLine, MyCommonAST aBrace, LeftCurlyOption aOption) { verifyWSAroundBegin(aBrace.getLineNo(), aBrace.getColumnNo() + 1, aBrace.getText()); final String bra... | 50482 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50482/513205d86a53fb1b65da8613563fa177bd5f4882/Verifier.java/clean/src/checkstyle/com/puppycrawl/tools/checkstyle/Verifier.java | [
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public void writeUTF(String str) throws IOException { throw new IOException("not required"); } | public void writeUTF(String str) throws IOException { throw new IOException("not required"); } | public void writeUTF(String str) throws IOException { throw new IOException("not required");} | 13625 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13625/84d120cc49d42a79bfbc68fe36429395bdef90fd/UnicastRemoteCall.java/buggy/libjava/gnu/java/rmi/server/UnicastRemoteCall.java | [
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return getPresentation().getControl().getBounds(); | Rectangle bounds = getClientArea(); if (site.getState() == IStackPresentationSite.STATE_MAXIMIZED) { return bounds; } boolean horizontal = Geometry.isHorizontal(side); int available = Geometry.getDimension(bounds, !horizontal); return Geometry.getExtrudedEdge(bounds, Math.min(FastViewPane.this.size, available), sid... | private Rectangle getBounds() { return getPresentation().getControl().getBounds(); } | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/1334a76d3033f5c80020f1a0c5c45fe244eebfad/FastViewPane.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/FastViewPane.java | [
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ResultSet result = ExecSQL("select typname from pg_type where oid = " + oid); if (((AbstractJdbc1ResultSet)result).getColumnCount() != 1 || ((AbstractJdbc1ResultSet)result).getTupleCount() != 1) throw new PSQLException("postgresql.unexpected"); result.next(); String pgType = result.getString(1); | String pgType; if (oid == 0) { pgType = "opaque"; } else { String sql; if (haveMinimumServerVersion("7.3")) { sql = "SELECT typname FROM pg_catalog.pg_type WHERE oid = " +oid; } else { sql = "SELECT typname FROM pg_type WHERE oid = " +oid; } ResultSet result = ExecSQL(sql); if (((AbstractJdbc1ResultSet)result).getColu... | public int getSQLType(int oid) throws SQLException { Integer sqlType = (Integer)sqlTypeCache.get(new Integer(oid)); // it's not in the cache, so perform a query, and add the result to the cache if (sqlType == null) { ResultSet result = ExecSQL("select typname from pg_type where oid = " + oid); if (((AbstractJd... | 47293 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47293/7c553901d7ab010ad1cb5bf44f9ca2fdae83909a/AbstractJdbc1Connection.java/buggy/src/interfaces/jdbc/org/postgresql/jdbc1/AbstractJdbc1Connection.java | [
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e.printStackTrace(); | ImViewerAgent.getRegistry().getLogger().error(this, e.getMessage()); | private void writeImage(BufferedImage image, String n) { UserNotifier un = ImViewerAgent.getRegistry().getUserNotifier(); n += "."+format; File f = new File(n); try { if (format.equals(TIFFFilter.TIF)) { Encoder encoder = new TIFFEncoder(Factory.createImage(i... | 13273 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13273/5aacd98a1cfb2219e218c87eed17b5a0f0e9738a/ImgSaver.java/clean/SRC/org/openmicroscopy/shoola/agents/imviewer/util/saver/ImgSaver.java | [
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depth);} | depth); } | public void parse(boolean NS) throws EncodingException, EOFException, EntityException, ParseException { // define internal variables ns = NS; int temp_offset = 0, length1 = 0, length2 = 0, increment = 1; int depth = -1, attr_count = 0, ch = 0, ch_temp = 0; int prev_ch = 0, prev2_ch = 0, parser_state = STATE_DOC... | 3680 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3680/b398d55c30402df8a8de6650255b1399d4c8067b/VTDGen1.java/clean/com/ximpleware/VTDGen1.java | [
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public static Object getNamedPlugin(Class intfc, String name) throws PluginInstantiationException { try { String iname = intfc.getName(); configureNamedPlugin(iname); String key = iname + SEP + name; String cname = (String)namedPluginClasses.get(k... | 47292 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47292/8cf0447063158ac73720ac9b14bede8703c61f25/PluginManager.java/buggy/dspace/src/org/dspace/core/PluginManager.java | [
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jjmatchedKind = 18; return jjMoveStringLiteralDfa1_6(0x28000L); | jjmatchedKind = 15; return jjMoveStringLiteralDfa1_6(0x5000L); | private final int jjMoveStringLiteralDfa0_6(){ switch(curChar) { case 35: jjmatchedKind = 18; return jjMoveStringLiteralDfa1_6(0x28000L); case 42: return jjMoveStringLiteralDfa1_6(0x1000000L); default : return jjMoveNfa_6(3, 0); }} | 9291 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9291/89173502837b4d67a69cd30d0b93cf47ed84c8cc/ParserTokenManager.java/clean/src/java/org/apache/velocity/runtime/parser/ParserTokenManager.java | [
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String organism = null; | public boolean readRichSequence(BufferedReader reader, SymbolTokenization symParser, RichSeqIOListener rlistener, Namespace ns) throws IllegalSymbolException, IOException, ParseException { String line; boolean hasAnotherSequence = true; //bool... | 50397 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50397/05b36241610b2e40a85168dccc182f8d5f51e4de/UniProtFormat.java/clean/src/org/biojavax/bio/seq/io/UniProtFormat.java | [
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iterateNodeSet(documentWrapper, xpathEvaluator, modelBind, new NodeHandler() { | final XPathEvaluator xpathEvaluator = new XPathEvaluator(documentWrapper); StandaloneContext context = (StandaloneContext) xpathEvaluator.getStaticContext(); for (Iterator j = modelBind.getNamespaceMap().keySet().iterator(); j.hasNext();) { String prefix = (String) j.next(); context.declareNamespace(prefix, (String) ... | public void applyInputOutputBinds(Document instance) { for (Iterator i = binds.iterator(); i.hasNext();) { final ModelBind modelBind = (ModelBind) i.next(); try { // Create XPath evaluator for this bind DocumentWrapper documentWrapper = new DocumentWrapper(... | 57229 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57229/5996bad8ae7a5e6bde143d457470ccb6e7d8a675/Model.java/buggy/src/java/org/orbeon/oxf/processor/xforms/Model.java | [
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String codeBase = getCodeBase().toExternalForm().substring(7); | String extForm = getCodeBase().toExternalForm(); String codeBase = extForm.substring(extForm.indexOf(":") + 3); | public void init() { this.subAppletClassName = getParameter("subapplet.classname"); if (subAppletClassName == null){ displayError("Init failed : Missing subapplet.classname argument"); return; } this.subAppletDisplayName = getParameter("subapplet.displayname"); if (subAppletDisplayName == nu... | 47282 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47282/1f4c024d5dd562a5c2b1e1c1257648b732a105a9/JOGLAppletLauncher.java/clean/src/classes/com/sun/opengl/util/JOGLAppletLauncher.java | [
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private void synchBugInstance() { // Get current bug instance BugInstance selected = getCurrentBugInstance(); if (selected == null) return; // If the details window is minimized, then the user can't see // it and there is no point in updating it. if (!vi... | 10715 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10715/a6faccf1f33035b730d9878d13d0da9fa199f1f8/FindBugsFrame.java/clean/findbugs/src/java/edu/umd/cs/findbugs/gui/FindBugsFrame.java | [
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if (jj_3R_478()) return true; | if (jj_scan_token(100)) return true; | final private boolean jj_3R_475() { Token xsp; xsp = jj_scanpos; if (jj_3_32()) { jj_scanpos = xsp; if (jj_3R_478()) return true; } return false; } | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/9aa0c6bec51662a685ea4b86bc02a52c9e593d8a/Parser.java/clean/dynamicjava/src/koala/dynamicjava/parser/Parser.java | [
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public org.quickfix.field.OrdType getOrdType() throws FieldNotFound { org.quickfix.field.OrdType value = new org.quickfix.field.OrdType(); | public quickfix.field.OrdType getOrdType() throws FieldNotFound { quickfix.field.OrdType value = new quickfix.field.OrdType(); | public org.quickfix.field.OrdType getOrdType() throws FieldNotFound { org.quickfix.field.OrdType value = new org.quickfix.field.OrdType(); getField(value); return value; } | 5926 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5926/fecc27f98261270772ff182a1d4dfd94b5daa73d/QuoteResponse.java/clean/src/java/src/quickfix/fix44/QuoteResponse.java | [
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XSDocumentInfo (Document schemaDoc) { | XSDocumentInfo (Document schemaDoc, XSAttributeChecker attrChecker) { | XSDocumentInfo (Document schemaDoc) { fSchemaDoc = schemaDoc; if(schemaDoc != null) { Element root = DOMUtil.getRoot(schemaDoc); // assign attributes appropriately according to // generalAttrCheck as applied to root. } } | 4434 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4434/6f04e9c6fc78d4e3eda5026b14b51f3b636479ac/XSDocumentInfo.java/clean/src/org/apache/xerces/impl/v2/XSDocumentInfo.java | [
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final Register tmpr = requestRegister(JvmType.INT, false); | final Register tmpr = L1AHelper.requestRegister(eContext, JvmType.INT, false); | public final void visit_checkcast(VmConstClass classRef) { // Pre-claim ECX requestRegister(ECX); requestRegister(EAX); // check that top item is a reference final RefItem ref = vstack.popRef(); // Load the ref ref.load(eContext); final Register refr = ref.getRegister(); final Register classr = EAX; final R... | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/7f3f443c80552e30cb144c1a1ce760d89fa35f2b/X86BytecodeVisitor.java/clean/core/src/core/org/jnode/vm/x86/compiler/l1a/X86BytecodeVisitor.java | [
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label_17: while (true) { if (jj_2_67(2)) { ; } else { break label_17; } ptr_operator(); } qualified_id(); jj_consume_token(LPARENTHESIS); | label_17: while (true) { if (jj_2_67(2)) { ; } else { break label_17; } ptr_operator(); | static final public void function_declarator_lookahead() throws ParseException { label_17: while (true) { if (jj_2_67(2)) { ; } else { break label_17; } ptr_operator(); } qualified_id(); jj_consume_token(LPA... | 41673 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/41673/23e69d576250f417c265d779703b8da08a67aaed/CPPParser.java/clean/pmd/src/net/sourceforge/pmd/cpd/cppast/CPPParser.java | [
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setProperty((String) evalAttr("property", getProperty(), | setProperty((String) evalAttr("property", getPropertyExpr(), | private void evaluateExpressions() throws JspException { try { setAccesskey((String) evalAttr("accessKey", getAccesskey(), String.class)); } catch (NullAttributeException ex) { setAccesskey(null); } try { setAlt((... | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/db064e19656421b94aaf753550935d95f44bd5f9/ELMultiboxTag.java/clean/contrib/struts-el/src/share/org/apache/strutsel/taglib/html/ELMultiboxTag.java | [
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target.translate(-1.0 * getFloatOption(Option.FROM_TRACE_SAMPLE), 1.0); | target.translate(-1.0 * getFloatOption(Option.FROM_TRACE_SAMPLE), 0.0); | public void getTransformAndConcat(AffineTransform target) { target.scale(horizScale, vertScale); // the y translation is a continuation of the rescale behavior found in // generatePaths target.translate(-1.0 * getFloatOption(Option.FROM_TRACE_SAMPLE), 1.0); } | 50115 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50115/fd43d3699b4d4360c98e57cc3e1aff45c90dfbc8/ChromatogramGraphic.java/buggy/src/org/biojava/bio/chromatogram/graphic/ChromatogramGraphic.java | [
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try { setAnchor((String) evalAttr("anchor", getAnchorExpr(), String.class)); } catch (NullAttributeException ex) { } | String string = null; Boolean bool = null; | private void evaluateExpressions() throws JspException { try { setAnchor((String) evalAttr("anchor", getAnchorExpr(), String.class)); } catch (NullAttributeException ex) { } try { setForward((String) evalAttr("forward", getForwardExpr(), ... | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/022bd23c954cf673e53731849d562b3c295473f1/ELRedirectTag.java/clean/contrib/struts-el/src/share/org/apache/strutsel/taglib/logic/ELRedirectTag.java | [
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if (sym.isSynthetic()) return type.widen(); return type; case CompoundType(Type[] parts, Scope members): if (global.debug) return type; | if (sym.isSynthetic()) return type.widen(); return type; case CompoundType(Type[] parts, Scope members): if (global.debug) return type; | public Type getTypeToPrintForType0(Type type) { switch (type) { case ThisType(_): if (global.debug) return type; return type.expandModuleThis(); case SingleType(_, Symbol sym): if (global.debug) return type; if (sym.isSynthetic()) return type.widen(); return type; cas... | 48012 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48012/51a5386fa3225c117633ea7171760590d01bf6f3/SymbolTablePrinter.java/buggy/sources/scalac/symtab/SymbolTablePrinter.java | [
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super.setPersonOrder(result.getResultParticipationsCount()); super.setResultParticipationRole(role); | super.setPersonOrder(order); super.setRole(role); | private void fillAllAttributes(Result result, Person participator, ResultParticipationRole role) { super.setResult(result); super.setPerson(participator); super.setPersonOrder(result.getResultParticipationsCount()); super.setResultParticipationRole(role); } | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/f7abe00b5548b12caf61a615516273677cbc5915/ResultParticipation.java/clean/src/net/sourceforge/fenixedu/domain/research/result/ResultParticipation.java | [
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System.out.println("...running "+descr+" via "+testCase.getFile()); out = openFile(outputDir, testCase.getFile(), ".out"); | String testName = testCase.getFile(); System.out.println("...running "+descr+" via "+testName); String logFileName = testName.substring(0, testName.lastIndexOf('.')); out = openFile(outputDir, logFileName + ".out"); | private static void seqRunCases(Vector cases, String descr, String inputDir, String outputDir) throws FileNotFoundException, IOException, ijFatalException { LocalizedOutput out; BufferedInputStream in; mtTestCase testCase; if (cases == null) { System.out.println("...no "+descr+" being performed"); return; ... | 56322 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56322/ece3ee6502c4a8c75d31ee4c66c7dcb6d8db45e4/MultiTest.java/buggy/java/testing/org/apache/derbyTesting/functionTests/harness/MultiTest.java | [
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return; } | return; } | public void endElement(String name) { //System.err.println("End: " + name); if (((HtmlTagMap)myTags).isHead(name)) { // we do nothing return; } if (((HtmlTagMap)myTags).isTitle(name)) { if (currentChunk != null) { bodyAttributes.put(ElementTags.TITLE, currentChunk.content())... | 4174 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4174/1f2223c2de935f818616fc1991f79ce136873350/SAXmyHtmlHandler.java/clean/src/com/lowagie/text/html/SAXmyHtmlHandler.java | [
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private Interpreter createCompiler() { | private Interpreter createCompiler() { | private Interpreter createCompiler() { Interpreter result = null; if (optimizationLevel >= 0 && codegenClass != null) { result = (Interpreter)Kit.newInstanceOrNull(codegenClass); } if (result == null) { result = new Interpreter(); } return result; } | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/767031d59e433c96cbc46c5e9fa8adb631f14074/Context.java/buggy/src/org/mozilla/javascript/Context.java | [
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Node.Target catchTarget = new Node.Target(); | Node catchTarget = Node.newTarget(); | Node createTryCatchFinally(Node tryBlock, Node catchBlocks, Node finallyBlock, int lineno) { boolean hasFinally = (finallyBlock != null) && (finallyBlock.getType() != Token.BLOCK || finallyBlock.hasChildren()); ... | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/00c3a706bf401545154202d57d1edaa0e2f9b8b8/IRFactory.java/buggy/src/org/mozilla/javascript/IRFactory.java | [
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throw Debug.abort("illegal case", location); | throw Debug.abort("unknown case", location); | public ATreePrinter printLocation(ALocation location) { switch (location) { case Module(Symbol module): return printSymbol(module); case Field(Void, Symbol field, true): return printSymbol(field.owner()).print('.').printSymbol(field); case Field(ACode object, Symbol... | 9617 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9617/eb5ca252d44bafe0848494c5be6c9fbfd0260eee/ATreePrinter.java/buggy/sources/scalac/atree/ATreePrinter.java | [
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+" &doubleBracket;> and &doubleBracket>" | +" &doubleBracket;> and &doubleBracket;>" | public void testQuotedCDataEndMarker() throws XMLStreamException { try { // First, using pre-defined/char entities String XML = "<root>" +"Ok the usual one: ]]>" +" and then alternatives: ]]>" +", ]]>" ... | 2047 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2047/37838724c0ce94182ddd5f78a55ad091a8974edb/TestEntityRead.java/clean/dev/src/org/codehaus/stax/test/stream/TestEntityRead.java | [
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0, -1, -1, -1, -1, -1, 124, 125, -1, -1, 10, -1, -1, -1, -1, -1, -1, -1, -1, 318, | -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, | private static final short[] yyCheck2() { return new short[] { 126, -1, -1, -1, -1, -1, -1, -1, 94, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, 257... | 46454 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46454/f5c9a1ebd775712f2dc086acfce1a14a123ec632/YyTables.java/clean/src/org/jruby/parser/YyTables.java | [
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public void testIsCompletedToday() { ITask task = new Task("1", "task-1", true); task.setCompleted(true); task.setCompletionDate(new Date()); assertTrue(manager.isCompletedToday(task)); MockRepositoryTask mockTask = new MockRepositoryTask(MOCK_REPOSITORY_URL+"-1"); manager.getTaskList().addTask(mockTask); moc... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/a5afacf1ca03ddad22ebd22b524fac207d9216ab/TaskListManagerTest.java/clean/org.eclipse.mylyn.tasks.tests/src/org/eclipse/mylyn/tasks/tests/TaskListManagerTest.java | [
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recoverOriginalLibrary( "LibraryToReload_backup.xml", "LibraryToReload.xml" ); | String libFilePath = (String) filePaths.get( 1 ); | public void testReloadLibraryWithException( ) throws Exception { openDesign( "DesignToReloadLibrary.xml" ); //$NON-NLS-1$ // make modification on its library. openLibrary( "Library_1.xml" );//$NON-NLS-1$ try { designHandle.reloadLibrary( libraryHandle ); fail( ); } catch ( SemanticException e ) { assertE... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/14f7f5097c347fb97b4edd5251bb64dc3c62527b/ReloadLibraryTest.java/buggy/model/org.eclipse.birt.report.model.tests/test/org/eclipse/birt/report/model/library/ReloadLibraryTest.java | [
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HttpServletResponse response) throws IOException, ServletException { | HttpServletResponse response) throws IOException, ServletException { | public void doPost(HttpServletRequest request, HttpServletResponse response) throws IOException, ServletException { process(request, response); } | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/893cf1f05ff2aed2f868307f45763b5b3bc5a257/ActionServlet.java/buggy/src/share/org/apache/struts/action/ActionServlet.java | [
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String getColorizedContent(final String content, final String fileExtension) throws IOException; | String getColorizedContent(final String content, final String fileExtension, final String encoding) throws IOException; | String getColorizedContent(final String content, final String fileExtension) throws IOException; | 50734 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50734/fbfc226d156d9aabfa62e069392e1ed246b2985c/Colorer.java/buggy/sventon/dev/java/src/de/berlios/sventon/colorer/Colorer.java | [
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try { position++; bCodeStream[classFileOffset++] = OPC_iconst_0; } catch (IndexOutOfBoundsException e) { resizeByteArray(OPC_iconst_0); | if (classFileOffset >= bCodeStream.length) { resizeByteArray(); | final public void iconst_0() { if (DEBUG) System.out.println(position + "\t\ticonst_0"); //$NON-NLS-1$ countLabels = 0; stackDepth++; if (stackDepth > stackMax) stackMax = stackDepth; try { position++; bCodeStream[classFileOffset++] = OPC_iconst_0; } catch (IndexOutOfBoundsException e) { resizeByteArray(OPC_iconst_... | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/3a562aaf09f9f323b583086b80b4683378886606/CodeStream.java/buggy/org.eclipse.jdt.core/compiler/org/eclipse/jdt/internal/compiler/codegen/CodeStream.java | [
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if (log.isInfoEnabled()) | if (log.isDebugEnabled()) | public void doTest(String jspName) throws Exception { WebRequest request = new GetMethodWebRequest(jspName); WebResponse response = runner.getResponse(request); if (log.isInfoEnabled()) { log.info(response.getText()); } WebTable[] tables = response.getTables()... | 7284 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7284/69ec962b1ef555522adf327d671a25f9f991f896/EncodedParametersTest.java/buggy/displaytag/src/test/java/org/displaytag/tags/EncodedParametersTest.java | [
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Symbol alias = staticsClass.newTypeAlias(Position.NOPOS, translateAttributes(ntype), aliasname, make.classType(nclazz)); statics.enterNoHide(alias); | protected String doComplete(Symbol root) { clazz = root; clazz.owner().initialize(); //??? if (make == null) make = new JavaTypeCreator(global.definitions); clazz.flags = translateAttributes(type); Type[] ifaces = type.getInterfaces(); scalac.symtab.Type[] baseTypes = new scalac.symtab.Type[ifaces.length+1]; ba... | 32355 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/32355/061a14c274eca558d490241b994ca3b780794eab/CLRClassParser.java/clean/sources/scalac/symtab/classfile/CLRClassParser.java | [
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nodeList.add(listNode2); | nodeList.add(listNode3); | ArrayList new26() { ArrayList nodeList = new ArrayList(); ArrayList nodeArrayList1 = (ArrayList) pop(); TypedLinkedList listNode2 = new TypedLinkedList(); { PStringEntry pstringentryNode1; pstringentryNode1 = (PStringEntry)nodeArrayList1.get(0); if(pstringentryNode1 != n... | 48893 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48893/9ba080b0c901d335db2cb543a5bc7d76ff474439/Parser.java/buggy/source/net/sourceforge/texlipse/bibparser/parser/Parser.java | [
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public void setConf(NutchConf conf) { | public void setConf(Configuration conf) { | public void setConf(NutchConf conf) { super.setConf(conf); // the default constructor was called if (this.rules == null) { String filename = getConf().get("urlnormalizer.regex.file"); URL url = getConf().getResource(filename); try { this.rules = readConfigurationFile(url.toString()); ... | 1316 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1316/25437bc825d50715dcc9a289a1b4c8fbbc6aced1/RegexUrlNormalizer.java/buggy/src/java/org/apache/nutch/net/RegexUrlNormalizer.java | [
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return i != null ? i.intValue() : 0; | return i != null ? i.intValue() : -1; | public synchronized int getContentLength() { Integer i = (Integer)propertiesMap.get(FILE_SIZE); return i != null ? i.intValue() : 0; } | 5134 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5134/fff57b4b651bc4003027538bf5191349456c108b/ManagedDownloader.java/clean/components/gnutella-core/src/main/java/com/limegroup/gnutella/downloader/ManagedDownloader.java | [
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{"Minimal_Days",new java.lang.Integer(1),}, | {"Minimal_Days",java.lang.Integer.valueOf(1),}, | protected Object[][] getContents() { Object[][] contents = { {"Minimal_Days",new java.lang.Integer(1),}, {"Date_SHORT","d/MM/yy",}, {"Time_FULL","H.mm' u. 'z",}, {"CurrencySymbol","\u20ac",}, {"IntCurrencySymbol","EUR",}, {"Currency","#,##0.00 \u00a4",}, };return contents;} | 54769 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54769/4cd556f6bcafbcc4bb2142e05523342b18bd2dda/Locale_nl_BE.java/clean/modules/luni/src/main/java/org/apache/harmony/luni/internal/locale/Locale_nl_BE.java | [
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if ( oc.contains( COLLECTIVE_SUBENTRY_OC ) ) | if ( oc.contains( COLLECTIVE_AREA ) ) | private int getSubentryTypes( Attributes subentry ) throws NamingException { int types = 0; Attribute oc = subentry.get( "objectClass" ); if ( oc == null ) { throw new LdapSchemaViolationException( "A subentry must have an objectClass attribute", Res... | 17035 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17035/7a89d588ce906f19fa641170e9721907534af40e/SubentryService.java/clean/core/src/main/java/org/apache/directory/server/core/subtree/SubentryService.java | [
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return 3; | return 4; | public int getColumnCount() { return 3; } //}}} | 6564 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6564/a06d5bdd990bb0b2b070235682983982a0dce844/ManagePanel.java/buggy/org/gjt/sp/jedit/pluginmgr/ManagePanel.java | [
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BufferedReader br = new BufferedReader(new FileReader(settings.getReleaseNotes())); | br = new BufferedReader(new FileReader(settings.getReleaseNotes())); | public ECUEditor() { // get settings from xml try { InputSource src = new InputSource(new FileInputStream(new File("./settings.xml"))); DOMSettingsUnmarshaller domUms = new DOMSettingsUnmarshaller(); DOMParser parser = new DOMParser(); parser.parse(s... | 48870 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48870/d28857129c457538d854eb19124ccddf5695887d/ECUEditor.java/clean/src/enginuity/ECUEditor.java | [
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value = new String(Base64.base64ToByteArray(new StringBuffer(cdata.toString().trim()), null), "UTF-8"); | value = new String(SVNBase64.base64ToByteArray(new StringBuffer(cdata.toString().trim()), null), "UTF-8"); | protected void endElement(DAVElement parent, DAVElement element, StringBuffer cdata) throws SVNException { if (element == OPEN_DIRECTORY || element == ADD_DIRECTORY) { myEditor.closeDir(); if ("".equals(myPath)) { myEditor.closeEdit(); } myChecksum = nu... | 5695 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5695/7d9e268d6a37ea439479b898087708ee528aa904/DAVEditorHandler.java/clean/javasvn/src/org/tmatesoft/svn/core/internal/io/dav/handlers/DAVEditorHandler.java | [
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public void actionPerformed(ActionEvent e) { try { String lsid = (String) JOptionPane.showInputDialog(null, "LSID to open?", "LSID Required", JOptionPane.QUESTION_MESSAGE, null, null, "URN:LSID:"); if (lsid != null && store != null) { | public void actionPerformed(ActionEvent e) { try { String lsid = (String) JOptionPane.showInputDialog(null, "LSID to open?", "LSID Required", JOptionPane.QUESTION_MESSAGE, null, null, "URN:LSID:"); if (lsid != null && store != null) { | public void actionPerformed(ActionEvent e) { try { String lsid = (String) JOptionPane.showInputDialog(null, "LSID to open?", "LSID Required", JOptionPane.QUESTION_MESSAGE, null, null, "URN:LSID:"); if (lsid != null && store != null) { DataThing thing = store.fetchDataThing(lsid); ... | 7616 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7616/6001f3303b9becce97c03f7b0fae6a5972cb3bdf/DataThingConstructionPanel.java/buggy/trunk/taverna1.0/src/org/embl/ebi/escience/scuflui/DataThingConstructionPanel.java | [
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" should be opened in a try block, and closed in a finally block #loc"; | " should be opened in a try block, and closed in a finally block #loc"; | public String buildErrorString(PsiElement location){ final PsiExpression expression = (PsiExpression) location; final PsiType type = expression.getType(); final String text = type.getPresentableText(); return "JDBC " + text + " should be opened in a try block, and c... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/bd57f07c33c419f20715b114b71a7e93425b34c9/JDBCResourceInspection.java/buggy/plugins/InspectionGadgets/src/com/siyeh/ig/resources/JDBCResourceInspection.java | [
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