rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
|---|---|---|---|---|---|---|
VM_JavaHeader.writeAvailableBitsWord(bootImage, ref, status); | VM_JavaHeader.writeAvailableBitsWord(bootImage, ref.toInt(), status); | public static void initializeHeader(BootImageInterface bootImage, int ref, Object[] tib, int size, boolean isScalar) throws InterruptiblePragma { // int status = VM_JavaHeader.readAvailableBitsWord(bootImage, ref); Word status = Plan.getBootTimeAvailableBits(ref, ... | 4011 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4011/512b7ae853c6979c3f6acf302871ef9527123d44/VM_AllocatorHeader.java/buggy/rvm/src/vm/memoryManagers/JMTk/vmInterface/VM_AllocatorHeader.java | [
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public DF(String path) throws IOException { Process process = Runtime.getRuntime().exec(new String[] {"df","-k",path}); try { if (process.waitFor() == 0) { BufferedReader lines = new BufferedReader(new InputStreamReader(process.getInputStream())); lines.readLine(); StringTokenizer tokens = new StringTokenizer(lines... | public DF(String path, Configuration conf ) throws IOException { this( path, conf.getLong( "dfs.df.interval", DF.DF_INTERVAL_DEFAULT )); | public DF(String path) throws IOException { Process process = Runtime.getRuntime().exec(new String[] {"df","-k",path}); try { if (process.waitFor() == 0) { BufferedReader lines = new BufferedReader(new InputStreamReader(process.getInputStream())); lines.readLine(); ... | 55137 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55137/fa8ed1c0ee625b2f259787749309594d6792971c/DF.java/clean/src/java/org/apache/hadoop/fs/DF.java | [
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true, op ); | true, op ); | private void saveFile( final ModuleHandle moduleHandle, final File file, IProgressMonitor monitor ) { IRunnableWithProgress op = new IRunnableWithProgress( ) { public synchronized final void run( IProgressMonitor monitor ) throws InvocationTargetException, InterruptedException { try { IWorkspaceRu... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/604ce5391dbc451664ffe72c0eb2da50e51bc4ed/FileReportProvider.java/clean/UI/org.eclipse.birt.report.designer.ui.editors/src/org/eclipse/birt/report/designer/internal/ui/editors/FileReportProvider.java | [
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final int paramType = getColumnMetaDataX().getColumnType(parameterIndex); | final int paramType = getColumnMetaDataX().getColumnType( checkForEscapedCallWithResult( parameterIndex ) ); | public void setDate(int parameterIndex, java.sql.Date x) throws SQLException { try { synchronized (connection_) { if (agent_.loggingEnabled()) { agent_.logWriter_.traceEntry(this, "setDate", parameterIndex, x); } ... | 56322 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56322/bc52552f4e62dd1ab68d634f318901f4de825661/PreparedStatement.java/clean/java/client/org/apache/derby/client/am/PreparedStatement.java | [
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int alt47=2; int LA47_0 = input.LA(1); if ( (LA47_0==LEFT_PAREN) ) { alt47=1; | int alt46=2; int LA46_0 = input.LA(1); if ( (LA46_0==LEFT_PAREN) ) { alt46=1; | public NotDescr lhs_not() throws RecognitionException { NotDescr d = null; Token loc=null; BaseDescr column = null; d = null; try { // D:\\workspace\\jboss\\jbossrules\\drools-compiler\\src\\main\\resources\\org\\drools\\lang\\DRL.g:1246:4: (loc= '... | 5490 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5490/afea9f80e7c11e7b76df18f232d3b5ca5ad21e72/DRLParser.java/buggy/drools-compiler/src/main/java/org/drools/lang/DRLParser.java | [
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DiffieHellmanContext ctx = processDHTwoOrThree(2, payload, pn, replyTo, true); | processDHTwoOrThree(2, payload, pn, replyTo, true); | private void processDecryptedAuth(byte[] payload, PeerNode pn, Peer replyTo) { Logger.minor(this, "Processing decrypted auth packet from "+replyTo+" for "+pn); /* Format: * 1 byte - version number (0) * 1 byte - negotiation type (0 = simple DH, will not be supported when implement JFKi... | 50653 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50653/f0c58763eb678e0ff60284024d7b22cf826fb063/FNPPacketMangler.java/clean/src/freenet/node/FNPPacketMangler.java | [
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delegate.addAll(0, Collections.nCopies(-index, autoResizeObject)); position += -index; } else if (index >= delegate.size()) { | throw new UnsupportedOperationException("Cannot access an element left of the list"); } else if (index > delegate.size()) { | protected void autoResize(int index) { if (!autoResize) { return; } else if (index < 0) { delegate.addAll(0, Collections.nCopies(-index, autoResizeObject)); position += -index; } else if (index >= delegate.size()) { delegate.ensureCapacity... | 1060 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1060/662c05593e6f402ddd6badcfa923a544ab949833/DefaultPointer.java/clean/org/jruby/util/DefaultPointer.java | [
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redoClearDirty = toMerge; | redoClearDirty = last; | public void contentRemoved(int offset, int length, String text, boolean clearDirty) { Edit toMerge = getLastEdit(); if(!clearDirty && toMerge instanceof Remove && redosFirst == null) { Remove rem = (Remove)toMerge; if(rem.offset == offset) { rem.str = rem.str.concat(text); rem.hashcode = rem.str.hashC... | 8690 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8690/656e2549d034f3be40edd953ea8abcb99d54dc06/UndoManager.java/buggy/org/gjt/sp/jedit/buffer/UndoManager.java | [
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UMOEndpoint endpoint = (UMOEndpoint) endpointCache.get(endpointUri); | UMOEndpoint endpoint = (UMOEndpoint)endpointCache.get(endpointUri); | protected UMOEndpoint getEndpoint(UMOEvent event, String endpointUri) throws UMOException { UMOEndpoint endpoint = (UMOEndpoint) endpointCache.get(endpointUri); if (endpoint == null) { UMOEndpointURI ep = new MuleEndpointURI(endpointUri); endpoint = MuleEndpoint.getOrCreateEnd... | 28323 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28323/f659778f07cc26d6d970061c635faba08bd4672b/DefaultReplyToHandler.java/buggy/src/java/org/mule/providers/DefaultReplyToHandler.java | [
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public Object getObject() | public List<String> getObject() | public Object getObject() { if (resources.isEmpty()) { get(page); // PackageName name = PackageName.forClass(page); // ClassLoader loader = page.getClassLoader(); // String path = Strings.replaceAll(name.getName(), ".", // "/").toString(); // try // { // // gives the urls for each place w... | 46434 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46434/2859872ee0d83bc7854220e8ee4a9a28a45514ab/SourcesPage.java/clean/wicket-examples/src/java/wicket/examples/source/SourcesPage.java | [
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final Comparator<PluginDescriptor> pluginsComparator = new Comparator<PluginDescriptor>() { public int compare(final PluginDescriptor o1, final PluginDescriptor o2) { return o1.getName().compareTo(o2.getName()); } }; Arrays.sort(myInstalledPlugins, pluginsComparator); | height = (docsGroup.getIdx() + 1)/2 * buttonHeight + captionHeight; } myMainPanel.setPreferredSize(new Dimension(width, height)); | private WelcomeScreen() { // Create Plugins Panel myPluginsPanel = new PluginsPanel(new GridBagLayout()); myPluginsPanel.setBackground(PLUGINS_PANEL_COLOR); JLabel pluginsCaption = new JLabel("Plugins"); pluginsCaption.setFont(CAPTION_FONT); pluginsCaption.setForeground(CAPTION_COLOR); JLabel ins... | 56598 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56598/057c1fc4eca73d8d659037771b3e5b73e8b81dd3/WelcomeScreen.java/clean/source/com/intellij/openapi/wm/impl/welcomeScreen/WelcomeScreen.java | [
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if (dialog.getRemoteSequenceNumberLong() > sipRequest.getCSeq() .getSequenceNumberLong()) { | if (dialog.getRemoteSeqNumber() > sipRequest.getCSeq() .getSeqNumber()) { | public void processRequest(SIPRequest sipRequest, MessageChannel incomingMessageChannel) { // Generate the wrapper JAIN-SIP object. if (sipStack.isLoggingEnabled()) sipStack.getLogWriter().logDebug( "PROCESSING INCOMING REQUEST " + sipRequest + " transactionChannel = " + transactionChannel + " li... | 7607 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7607/ae73fb4580278cf49a75d1b92d3994df557485e7/DialogFilter.java/buggy/trunk/src/gov/nist/javax/sip/DialogFilter.java | [
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fn.setIsTargetOfDirectCall(); | if (!fn.isTargetOfDirectCall()) { int index = directCallTargets.size(); directCallTargets.add(fn); fn.setDirectTargetIndex(index); } | private void detectDirectCall(Node node, ScriptOrFnNode tree) { if (tree.getType() == TokenStream.FUNCTION) { Node left = node.getFirstChild(); // count the arguments int argCount = 0; Node arg = left.getNext(); while (arg != null) { ar... | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/254d313fa4af2fecbee1dfc1461584e0bc2ecad6/OptTransformer.java/clean/js/rhino/src/org/mozilla/javascript/optimizer/OptTransformer.java | [
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byte[] bitmap = getBlock( gdesc.getInodeBitmap() ); synchronized(bitmap) { INodeReservation result = INodeBitmap.findFreeINode(bitmap); | synchronized(blockCache) { byte[] bitmap= getBlock( gdesc.getInodeBitmap() ); | protected INodeReservation findFreeINode(int blockGroup) throws IOException{ GroupDescriptor gdesc = groupDescriptors[blockGroup]; if(gdesc.getFreeInodesCount()> 0) { byte[] bitmap = getBlock( gdesc.getInodeBitmap() ); synchronized(bitmap) { INodeReservation result = INodeBitmap.findFreeINode(bitmap); ... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/bca7c2e0848f3672930b39223f626f4996c1b295/Ext2FileSystem.java/clean/fs/src/fs/org/jnode/fs/ext2/Ext2FileSystem.java | [
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IEnrolment enrollment = (IEnrolment) enrollments.get(i); | IEnrollment enrollment = (IEnrollment) enrollments.get(i); | protected List cloneEnrolmentsToInfoEnrolments(List enrollments) { List infoEnrolments = new ArrayList(); for (int i = 0; i < enrollments.size(); i++) { IEnrolment enrollment = (IEnrolment) enrollments.get(i); InfoEnrolment infoEnrolment = Cloner.copyIEnrolment2InfoEnrolment(enrollment); infoEnrolments.add(in... | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/b725edc1d4fb8b6b021f161e06df030d1bd829e8/EnrollmentEquivalenceServiceUtils.java/buggy/src/ServidorAplicacao/Servico/equivalence/EnrollmentEquivalenceServiceUtils.java | [
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ASTRewriteCorrectionProposal proposal= new ASTRewriteCorrectionProposal(label, cu, rewrite, 1, image); | ASTRewriteCorrectionProposal proposal= new ASTRewriteCorrectionProposal(label, cu, rewrite, 5, image); | public static void addMethodWithConstrNameProposals(IAssistContext context, IProblemLocation problem, Collection proposals) throws CoreException { ICompilationUnit cu= context.getCompilationUnit(); ASTNode selectedNode= problem.getCoveringNode(context); if (selectedNode instanceof MethodDeclaration) { MethodDecl... | 9698 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9698/028724f56b5d662679496ef7e5232a0390ab1d7b/ReturnTypeSubProcessor.java/buggy/org.eclipse.jdt.ui/ui/org/eclipse/jdt/internal/ui/text/correction/ReturnTypeSubProcessor.java | [
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numImages = (int) ((file.length() - offset) / (2 * 64 * width * height)); | numImages = (int) ((in.length() - offset) / (2 * 64 * width * height)); | protected void initFile(String id) throws FormatException, IOException { super.initFile(id); File file = new File(id); in = new RandomAccessStream(id); // skip 14 byte header in.seek(14); // read offset offset = DataTools.read2UnsignedBytes(in, true) + 22; // skip to data in.seek(offset); ... | 49800 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49800/2df09d33bfdc966378aae0cc09cb503afb983bc2/SDTReader.java/clean/loci/formats/in/SDTReader.java | [
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releaseLock(conn, LOCK_TRIGGER_ACCESS, transOwner); closeConnection(conn); | try { releaseLock(conn, LOCK_TRIGGER_ACCESS, transOwner); } finally { closeConnection(conn); } | public void resumeTriggerGroup(SchedulingContext ctxt, String groupName) throws JobPersistenceException { Connection conn = getConnection(); boolean transOwner = false; try { getLockHandler().obtainLock(conn, LOCK_TRIGGER_ACCESS); transOwner = true; /... | 3431 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3431/a1e34efab77120ec8bb75b6dd44ed5d8a9b59918/JobStoreTX.java/buggy/src/java/org/quartz/impl/jdbcjobstore/JobStoreTX.java | [
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c = in.read(); | c = getChar(); | public int getToken() throws IOException { int c; tokenno++; // Check for pushed-back token if (this.pushbackToken != EOF) { int result = this.pushbackToken; this.pushbackToken = EOF; return result; } // Eat whitespace, possibly sensitive to... | 12376 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12376/8d78476dde863807579dcd20202decfcfcc9f7f1/TokenStream.java/buggy/js/rhino/src/org/mozilla/javascript/TokenStream.java | [
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protected void placeImage(int x, int y, int w, int h, int xobj) { | protected void placeImage(float x, float y, float w, float h, int xobj) { | protected void placeImage(int x, int y, int w, int h, int xobj) { saveGraphicsState(); currentStream.add(((float) w) + " 0 0 " + ((float) -h) + " " + (((float) currentIPPosition) / 1000f + x) + " " + (((float)(currentBPPosition... | 5268 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5268/639073c8e56acdc1ba6b7f06774016a580456afc/PDFRenderer.java/clean/src/java/org/apache/fop/render/pdf/PDFRenderer.java | [
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params.add(buildParameter(sql.length()-1, columns[i], currentRow[i])); | params.add(buildParameter(sql.length() - 1, columns[i], currentRow[i], connection.isUseUnicode())); | ParamInfo[] buildWhereClause(StringBuffer sql, ArrayList params, boolean select) throws SQLException { // // Now construct where clause // sql.append(" WHERE "); if (cursorName != null) { // // Use a positioned update // sql.a... | 2029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2029/6ebdc74a0dbe4206c2ef3ac527d5314ab4a56433/CachedResultSet.java/buggy/src/main/net/sourceforge/jtds/jdbc/CachedResultSet.java | [
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return entry.m_vertex; | return node.getData().m_vertex; | protected V provideNextVertex() { QueueEntry<V, E> entry = (QueueEntry<V,E>) m_heap.removeMin(); entry.m_frozen = true; return entry.m_vertex; } | 4188 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4188/3358959abc414f2281c71486c6c1a90935b1e909/ClosestFirstIterator.java/clean/src/org/jgrapht/traverse/ClosestFirstIterator.java | [
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EclipseSourceDir[] sourceDirs, ArtifactRepository localRepository ) | EclipseSourceDir[] sourceDirs, ArtifactRepository localRepository ) | protected void write( File basedir, MavenProject project, List referencedReactorArtifacts, EclipseSourceDir[] sourceDirs, ArtifactRepository localRepository ) throws MojoExecutionException { FileWriter w; try { w = new FileWriter( new File( basedir,... | 1315 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1315/ea3a153a9579791fa4842c8da385a020ae3a9b30/EclipseWtpmodulesWriter.java/clean/maven-plugins/maven-eclipse-plugin/src/main/java/org/apache/maven/plugin/eclipse/EclipseWtpmodulesWriter.java | [
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setReuseItems(false); | setReuseItems(true); | public RowListView(MarkupContainer parent, String id, MenuRowModel model) { super(parent, id, model); setReuseItems(false); } | 51612 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51612/c764d9e8a1d50b79fbacc5f3ab6d7668f3b048bd/MenuRow.java/buggy/wicket-contrib-navmenu/src/java/wicket/contrib/markup/html/navmenu/MenuRow.java | [
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field.setFloat(obj, val); | field.setFloat(obj, val); | final void setFloatField(Object obj, float val) { try { field.setFloat(obj, val); } catch(IllegalAccessException x) { throw new InternalError(x.getMessage()); } } | 13625 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13625/126d7770c7bb5b9c74598afb0864a336d457fd92/ObjectStreamField.java/clean/libjava/java/io/ObjectStreamField.java | [
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try { bb = computeBox(xs, iLocation, la, 0, 0); } catch (UnexpectedInputException uiex) | try { bb = computeBox(xs, iLocation, la, 0, 0); } catch (UnexpectedInputException uiex ) | final void computeAxisStartEndShifts(IDisplayServer xs, Label la, int iOrientation, int iLocation, AllAxes aax) throws GenerationException { final double dMaxSS = (aax != null && iOrientation == aax.getOrientation()) ? aax.getMaxStartShift() : 0; final double dMaxES = (aax != null && iOrientation =... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/e5c78f0e8317166d02fa384e14c3dd7aa1796f2c/AutoScale.java/clean/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/computation/withaxes/AutoScale.java | [
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} if (domain_id == 0) { throw new ParseFailedException("Expected -n<domain_id>"); | public void parse(Defaults d, LinkedList args) throws ParseFailedException, CommandFailedException { String vd_key = getStringParameter(args, 'k', ""); String partition_name = getStringParameter(args, 'p', ""); int domain_id = getIntParameter(args, 'n', d.domainNumber); int vbd_nu... | 6086 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6086/16c1819d6de9f52ef2b9de24318cc5cdb37cbf9d/ParseVbdCreate.java/buggy/tools/control/src/org/xenoserver/cmdline/ParseVbdCreate.java | [
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private void loadGETParameters( HttpServletRequest request, CoexpressionSearchCommand csc ) { if ( request == null || (request.getParameter( "searchString" ) == null) ) return; Map params = request.getParameterMap(); if ( params.get( "eeSearchString" ) != null ) { csc.setEeSe... | 4335 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4335/1e58c1ef6f6633e7775aba53b757c43be85383f0/CoexpressionSearchController.java/clean/gemma-web/src/main/java/ubic/gemma/web/controller/coexpressionSearch/CoexpressionSearchController.java | [
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State newFinalNode = newState(); | SMNode newFinalNode = (SMNode)newState(); | protected void removeSkipToFinal() { SMNode cur; State newFinalNode = newState(); SMEdge edge; Iterator it = nodes.iterator(); while(it.hasNext()) { cur = (SMNode)it.next(); if(cur.isFinalNode()) { cur.setFinal(false); Iterator e... | 236 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/236/0ef70d4b28b9ba57e6f494358b00e7ba15f1239d/TMStateMachine.java/buggy/aop/abc/src/abc/tm/weaving/matching/TMStateMachine.java | [
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return lineSource; | return lineSource(); | public String getLineSource() { return lineSource; } | 12564 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12564/d0771b878dc28db19b34996d546b15ce93d669c9/EvaluatorException.java/clean/src/org/mozilla/javascript/EvaluatorException.java | [
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public Rename(String datasetSchemaName, Schema renameTableSchema, String renameTableOldName, String renameTableNewName) { super(datasetSchemaName); | public Rename(String datasetSchemaName, String datasetTableName, Schema renameTableSchema, String renameTableOldName, String renameTableNewName) { super(datasetSchemaName, datasetTableName); | public Rename(String datasetSchemaName, Schema renameTableSchema, String renameTableOldName, String renameTableNewName) { super(datasetSchemaName); this.renameTableSchema = renameTableSchema; this.renameTableOldName = renameTableOldName; this.renameTableNewName = renameTableNewName; } | 2000 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2000/1a85b633207a8b1c4ea4af394422818beab7bbf9/MartConstructorAction.java/buggy/src/java/org/biomart/builder/model/MartConstructorAction.java | [
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.getRelationRestriction(); | .getConcatRelationRestriction(); | public void doConcat(final Concat action, final List statements) { final String srcSchemaName = action.getSourceTableSchema() == null ? action .getDataSetSchemaName() : ((JDBCSchema) action.getSourceTableSchema()) .getDatabaseSchema(); final String srcTableName = action.getSourceTableName(); final List s... | 2000 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2000/697fc52b912bb5a1524113edc0e15bf091f78336/MySQLDialect.java/buggy/src/java/org/biomart/builder/controller/dialects/MySQLDialect.java | [
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double[][] proj_req_values = calculateShortfallValues(projectedDueOutScheduleSeries, | double[][] proj_req_out_values = calculateShortfallValues(projectedDueOutScheduleSeries, | private void setValues() { if (valuesSet) return; valuesSet = true; // there's no actual or requested data if (maxSeries == 0) return; // compare actual due-in to requested due-in and // actual due-out to requested due-out int actualDueInScheduleSeries = -1; int unconfirmedDueInSche... | 7171 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7171/27f87866d884d64a42161b74762957c873d17f93/InventoryShortfallChartDataModel.java/buggy/glm/src/org/cougaar/domain/mlm/ui/planviewer/inventory/InventoryShortfallChartDataModel.java | [
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((LogicalExpr)_right).backPatchTrueList(after); | _right.backPatchTrueList(after); } else if (_right instanceof NotCall) { _right.backPatchTrueList(after); | public void translateDesynthesized(ClassGenerator classGen, MethodGenerator methodGen) { final InstructionList il = methodGen.getInstructionList(); final SyntaxTreeNode parent = getParent(); // Compile AND-expression if (_op == AND) { // Translate left hand side - must be true _left.translateDesyn... | 2723 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2723/a9e9a0f4288bb8ca6abd07224753d170af913ba9/LogicalExpr.java/clean/src/org/apache/xalan/xsltc/compiler/LogicalExpr.java | [
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return iBonus; } for (Iterator b = aList.iterator(); b.hasNext();) { final BonusObj aBonus = (BonusObj) b.next(); final PObject anObj = (PObject) aBonus.getCreatorObject(); | final PObject anObj = (PObject) bonus.getCreatorObject(); | public double calcBonusFromList(final List aList) { double iBonus = 0; if (aList.isEmpty()) { return iBonus; } for (Iterator b = aList.iterator(); b.hasNext();) { final BonusObj aBonus = (BonusObj) b.next(); final PObject anObj = (PObject) aBonus.getCreatorObject(); if (anObj == null) { continue; ... | 48301 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48301/eb5f93299afbba8e2b27cdc67dfddc016c5d86a9/PlayerCharacter.java/buggy/code/src/java/pcgen/core/PlayerCharacter.java | [
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String items[] = new String[count]; | public GtkChoicePeer (Choice c) { super (c); int count = c.getItemCount (); if (count > 0) { String items[] = new String[count]; for (int i = 0; i < count; i++) items[i] = c.getItem (i); append (items); } int selected = c.getSelectedIndex(); if (selected >= 0) select(selected); } | 45163 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45163/de1def922d61f2c8775ff796242c973408a67856/GtkChoicePeer.java/buggy/libjava/classpath/gnu/java/awt/peer/gtk/GtkChoicePeer.java | [
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AbstractTreeNode topPathElement = null; | AbstractTreeNode topPathElement; | private DefaultMutableTreeNode expandPathToElement(Object element) { ArrayList<AbstractTreeNode> pathToElement = getPathToElement(element); if (pathToElement.isEmpty()) { return null; } JTree tree = myAbstractTreeBuilder.getTree(); DefaultMutableTreeNode currentTreeNode = ((DefaultMutableTreeNo... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/3115f0e936209b12a5469a693e03aabc1b0512bb/StructureViewComponent.java/buggy/source/com/intellij/ide/structureView/newStructureView/StructureViewComponent.java | [
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requestResponse(null, null, g.getLoginUrl(scriptName), false, su); | requestResponse(null, null, g.getLoginUrl(scriptName), false, su, this); | private boolean login() { Object[] params = {g.toString()}; status(su, StatusUpdate.LEVEL_GENERIC, GRI18n.getString(MODULE, "logIn", params)); if (g.getType() != Gallery.TYPE_STANDALONE && g.getType() != Gallery.TYPE_APPLET) { try { requestResponse(null, null, g.getLoginUrl(scriptName), false, su); } ... | 9402 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9402/2a7407a093c5f325294c34bcce89c490432c4bae/GalleryComm2.java/clean/com/gallery/GalleryRemote/GalleryComm2.java | [
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private void copyArtifact( File artifactSource, File artifactTarget, Reporter reporter ) | private void copyArtifact( Artifact artifact, File artifactTarget, Reporter reporter ) | private void copyArtifact( File artifactSource, File artifactTarget, Reporter reporter ) throws IOException { InputStream inStream = null; OutputStream outStream = null; try { File targetParent = artifactTarget.getParentFile(); if ( !targetParent.exists() ... | 47160 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47160/dc92832ad28e92b0369b5061d9844010f2524302/RepositoryCleaner.java/clean/sandbox/repoclean/src/main/java/org/apache/maven/tools/repoclean/RepositoryCleaner.java | [
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System.err.println(e.getMessage()); | private int checkAnswers(QuizQuestion question) { int correctAnswers=0; Vector answers = this.servant.getAnswers(); Console.println("Current question: " + question.getId(), Console.MSG_DEBUG); Console.println("Correct answer: #"+question.getCorrectAnswer(), Console.MSG_DEBUG); Console.println("There are "+answe... | 12246 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12246/217bca0b012d3e68156c1411f94c5df12108bfbe/Quiz.java/buggy/quizmaster/server/Quiz.java | [
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logger = new org.openscience.cdk.tools.LoggingTool(this.getClass().getName()); | logger = new LoggingTool(this); | public Mol2Reader(Reader in) { logger = new org.openscience.cdk.tools.LoggingTool(this.getClass().getName()); input = new BufferedReader(in); } | 1306 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1306/2459f3e9e5d16120a10cb9a08055c3c6b60b755c/Mol2Reader.java/clean/src/org/openscience/cdk/io/Mol2Reader.java | [
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swapPostition(trim, 1, 3); trimManager.updateAreaTrim(ITrimManager.BOTTOM, trim, false); window.getShell().layout(true, true); trim = trimManager.getAreaTrim(ITrimManager.BOTTOM); validatePositions(SWAPPED_STATUS_LINE, trim); } | swapPostition(trim, 1, 3); trimManager.updateAreaTrim(ITrimManager.BOTTOM, trim, false); window.getShell().layout(true, true); trim = trimManager.getAreaTrim(ITrimManager.BOTTOM); validatePositions(SWAPPED_STATUS_LINE, trim); | public void testMoveStatusLine() throws Throwable { IWorkbenchWindow window = openTestWindow(); if (window instanceof WorkbenchWindow) { ITrimManager trimManager = ((WorkbenchWindow)window).getTrimManager(); List trim = trimManager.getAreaTrim(ITrimManager.BOTTOM); validatePositions(DEFAULT_BOTTOM, trim); sw... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/c5d4795a2a1d7efa2849147877a3ca86f24d6221/TrimLayoutTest.java/buggy/tests/org.eclipse.ui.tests/Eclipse UI Tests/org/eclipse/ui/tests/api/TrimLayoutTest.java | [
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"-value3:", "-9223372036854775807", | "-value3", "-9223372036854775807", "-value4", "-1", | public void testBasic() throws ErrorMessage { String specs[] = { "flag1", "value1:", "value2:", "flag2", "value3:" }; String args[] = { "arg1", "-value1:", "42", "-flag2", "-value3:", "-9223372... | 2255 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2255/c5b817ed12993a69a76062842c6aade21b600817/OptionsTest.java/clean/test/junit/src/net/sf/gogui/utils/OptionsTest.java | [
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Asserts.notReached(); | assert false; | private static void addVisibility() { final Field[] fields = Visibility.class.getFields(); delegates.put(loadClass("org.jruby.runtime.Visibility"), new PersistenceDelegate() { /** * @see java.beans.PersistenceDelegate#instantiate(Object, Encoder) */ protec... | 45298 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45298/b72a2862ae5b2f01f9a767ef2ce248fd785857c4/AstPersistenceDelegates.java/clean/src/org/jruby/ast/util/AstPersistenceDelegates.java | [
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static Object readData(ResponseStream in, ColInfo ci, boolean readTextMode) throws IOException, ProtocolException { int len; switch (ci.tdsType) { case SYBINTN: switch (in.read()) { case 1: return new Byte((byte) in.read())... | 2029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2029/b6c2b55c4a8a51cf38c59497cb712a38582b7fba/TdsData.java/buggy/src/main/net/sourceforge/jtds/jdbc/TdsData.java | [
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ExpBase exp = (ExpBase) getArg(evaluator, args, 1, valueFunCall); | ExpBase exp = (ExpBase) getArgNoEval(args, 1, valueFunCall); | protected void defineFunctions() { defineReserved("NULL"); // first char: p=Property, m=Method, i=Infix, P=Prefix // 2nd: // ARRAY FUNCTIONS if (false) define(new FunDefBase("SetToArray", "SetToArray(<Set>[, <Set>]...[, <Numeric Expression>])", "Converts one or more sets to an array for use in a user-if (false) d... | 37907 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/37907/0ab3be7797c0940dd5a113451bfd9a43186433e0/BuiltinFunTable.java/clean/src/main/mondrian/olap/fun/BuiltinFunTable.java | [
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boolean autoKern = true; boolean doWordSpacing = false; boolean doLetterSpacing = false; | boolean autoKern = true; boolean doWordSpacing = false; boolean doLetterSpacing = false; | protected Point2D doSpacing(Float kern, Float letterSpacing, Float wordSpacing) { boolean autoKern = true; boolean doWordSpacing = false; boolean doLetterSpacing = false; float kernVal = 0f; float letterSpacingVal = 0f; float wordSpacingVal = 0f; if ((kern i... | 45946 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45946/d864a7831760c16be2dce5726c3e6b15bbbba80a/GlyphLayout.java/clean/sources/org/apache/batik/gvt/text/GlyphLayout.java | [
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private static void createClassObjects() { | private static void createClassObjects() throws VM_PragmaInterruptible { | private static void createClassObjects() { for (int i=0; i<classObjects.length; i++) { classObjects[i].getClassForType(); } } | 4011 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4011/4a987a25f93ceebb0f47a68989f48a184a7ef4ca/VM.java/buggy/rvm/src/vm/VM.java | [
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presences.addAll(room.addMember(jid.toBareJID(), null, senderRole)); | presences.addAll(room.addMember(jid.toBareJID(), nick, senderRole)); | private void handleItemsElement(MUCRole senderRole, List itemsList, IQ reply) throws ForbiddenException, ConflictException, NotAllowedException { Element item; String affiliation = null; String roleAttribute = null; boolean hasJID = ((Element)itemsList.get(0)).attributeValue("... | 51636 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51636/e6e4f0b67f4352fefe33ce27230a0d0d200a4bfa/IQAdminHandler.java/buggy/src/java/org/jivesoftware/messenger/muc/spi/IQAdminHandler.java | [
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int idx = (int) RubyNumeric.num2long(args[0]); | int idx = (int) args[0].convertToInteger().getLongValue(); | public IRubyObject aref(IRubyObject[] args) { if (checkArgumentCount(args, 1, 2) == 2) { return substr(RubyNumeric.fix2int(args[0]), RubyNumeric.fix2int(args[1])); } if (args[0] instanceof RubyFixnum) { int idx = RubyNumeric.fix2int(args[0]); if (idx < 0) { ... | 49687 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49687/803c66ee682936beecc8a43fe2cfc90fe5645b22/RubyString.java/buggy/src/org/jruby/RubyString.java | [
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serviceGroupDescription.addService(axisService); serviceGroupDescription.getServiceGroupContext(sysContext); serviceGroupDescription.setServiceGroupName(assumedServiceName.getLocalPart()); sysContext.getAxisConfiguration().addServiceGroup(serviceGroupDescription); | sysContext.getAxisConfiguration().addService(axisService); | protected static ServiceContext assumeServiceContext(String clientHome) throws AxisFault { ConfigurationContext sysContext = null; //we are trying to keep one configuration Context at the Client side. That make it easier to //manage the TransportListeners. But using the static refera... | 49300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49300/87a78f5e48b48943c93e5553e20184f813628e25/Call.java/buggy/modules/core/src/org/apache/axis2/clientapi/Call.java | [
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if (repositoryTask.getSyncState() == RepositoryTaskSyncState.SYNCHRONIZED) { image = TaskListImages.getImage(TaskListImages.TASK_REPOSITORY); } else if (repositoryTask.getSyncState() == RepositoryTaskSyncState.OUTGOING) { | if (repositoryTask.getSyncState() == RepositoryTaskSyncState.OUTGOING) { | public Image getImage(Object element) { Image image = null; if (element instanceof TaskCategory) { TaskCategory category = (TaskCategory) element; if (category.isArchive()) { image = TaskListImages.getImage(TaskListImages.CATEGORY_ARCHIVE); } else { image = TaskListImages.getImage(TaskListImages.CATEGORY... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/eed6cfb6d398e180fd9bd900652104fb4bc58182/TaskElementLabelProvider.java/buggy/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/internal/tasklist/ui/views/TaskElementLabelProvider.java | [
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boolean one2n = role.isReversable() && !role.getReverse().isCollection(); if (one2n && e instanceof RemoveEvent) { op = m_engine.getOperation(arg, null, table); | boolean one2n = role.isReversable() && !role.getReverse().isCollection(); if (one2n && e instanceof RemoveEvent) { op = m_engine.getOperation(arg, null, table); } else { op = m_engine.getOperation(arg, obj, table); } if (op != null) { return; } if (e instanceof AddEvent || e instanceof SetEvent && arg != null) { op = ... | public void onJoinThrough(JoinThrough m) { Table table = m.getFrom().getTable(); DML op = m_engine.getOperation(obj, arg, table); // This should eliminate duplicates, but we could be // smarter by canceling out inserts and updat... | 12196 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12196/9b6a9166672395cb98245049c4053134da8e686a/EventSwitch.java/buggy/archive/proto/src/com/arsdigita/persistence/proto/engine/rdbms/EventSwitch.java | [
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break; | break; | protected Document translateCDTProjectToDocument() { Document document = null; Element rootElement = null; try { document = DocumentBuilderFactory.newInstance().newDocumentBuilder().newDocument(); ICDescriptor descriptor; descriptor = CCorePlugin.getDefault().getCProjectDescription(getProject()); rootElemen... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/d8a96ca65d097d6d2456c9c1de3141f791626acb/ProjectTargets.java/clean/build/org.eclipse.cdt.make.core/src/org/eclipse/cdt/make/internal/core/ProjectTargets.java | [
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if (cbItem != null) coolBarMgr.remove(cbItem); | if (cbItem != null) { coolBarMgr.remove(cbItem); } | protected void revokeAdjunctCoolbarAction(ActionDescriptor ad, ActionSetActionBars bars) { String toolBarId = ad.getToolbarId();// String toolGroupId = ad.getToolbarGroupId();//// String contributingId = bars.getActionSetId(); ICoolBarManager coolBarMgr... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/fa4a8cff0e027f8d3c6b1fcb92b30f46767dd191/PluginActionSetBuilder.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/PluginActionSetBuilder.java | [
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System.out.println("done"); | public Structure parsePDBFile(InputStream inStream) throws IOException, PDBParseException { System.out.println("preparing buffer"); BufferedReader buf ; try { buf = getBufferedReader(inStream); } catch (IOException e) { e.printStackTrace(); throw new IOException ("error initializing BufferedRea... | 50115 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50115/48b81fa6f6cf265c4791633b465fa65eb34fc9d3/PDBFileReader.java/clean/src/org/biojava/bio/structure/io/PDBFileReader.java | [
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if (tried != null) { throw UniversalRuntimeException.accumulate(new FileNotFoundException(), "Cannot load template file from any of paths " + tried.toString()); | if (xcvt != null && xcvt.roottemplate == null) { throw UniversalRuntimeException.accumulate(new IllegalArgumentException(), "No TemplateResolverStrategy which was marked as a root resolver (rootPriority > 0) " + "returned a template: tried paths (expected) " + tried.toString()); | public ViewTemplate locateTemplate(ViewParameters viewparams) { TemplateResolverStrategy rootstrategy = null; int highestpriority = 0; // NB if we really want this optimisation, it must be based on # // of RETURNED templates, not the number of strategies! XMLCompositeViewTemplate xcvt = strategies.size... | 29 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/29/8b3b89346c5e43c41b830e44c5b5626a37f65035/BasicTemplateResolver.java/buggy/rsf-core/core/src/uk/org/ponder/rsf/templateresolver/BasicTemplateResolver.java | [
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if ( format == null ) super.setOutputFormat( new OutputFormat( Method.HTML, null, false ) ); else super.setOutputFormat( format ); | if ( format == null ) super.setOutputFormat( new OutputFormat( Method.HTML, null, false ) ); else super.setOutputFormat( format ); | public void setOutputFormat( OutputFormat format ) { if ( format == null ) super.setOutputFormat( new OutputFormat( Method.HTML, null, false ) ); else super.setOutputFormat( format ); } | 6373 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6373/af047e33ee4283cd437ffa6760ccff3d3d2bf9ea/HTMLSerializer.java/buggy/src/org/apache/xml/serialize/HTMLSerializer.java | [
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return c; } | return c; } | public static char getFieldChar (Object instance, Class declaringClass, String fieldName) throws NoSuchFieldError { char c = '0'; try { // following may throw NoSuchFieldError; Field f = declaringClass.getDeclaredField( fieldName ); f.setAccessible( true ); // to allow access to ... | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/705cb85b3c7e05696189446f5268011580d80945/ReflectionSupport.java/buggy/rvm/src/vm/libSupport/ReflectionSupport.java | [
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int noex = (name.equals("initialize")) ? Constants.NOEX_PRIVATE : Constants.NOEX_PUBLIC; | Visibility noex = name.equals("initialize") ? Visibility.PRIVATE : Visibility.PUBLIC; | public void defineMethod(String name, Callback method) { int noex = (name.equals("initialize")) ? Constants.NOEX_PRIVATE : Constants.NOEX_PUBLIC; addMethod(name, new CallbackMethod(method), noex | Constants.NOEX_CFUNC); } | 49476 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49476/f05423516c2d1bfe54c4363eedb9654f7cfb6898/RubyModule.java/clean/org/jruby/RubyModule.java | [
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boolean synPredMatched27 = false; | boolean synPredMatched369 = false; | public final void document_function( PathExpr expr ) throws RecognitionException, TokenStreamException, PermissionDeniedException,EXistException { Token arg3 = null; Token arg1 = null; Token arg2 = null; Token arg4 = null; Expression step = null; boolean inclusive = true; switch ( LA(1)) { case ... | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/19d6ae2fb06165d4fc5664b5ba1d63fffa036bdf/XPathParser.java/clean/src/org/exist/parser/XPathParser.java | [
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String email = (a.getEmail() != null) ? (" <" + a.getEmail() + ">") : ""; | String email = (a.getEmail() != null && a.getEmail().length() > 0) ? (" <" + a.getEmail() + ">") : ""; | public HelloPanel(InstallerFrame parent, InstallData idata) { super(parent, idata); // The 'super' layout GridBagLayout superLayout = new GridBagLayout(); setLayout(superLayout); GridBagConstraints gbConstraints = new GridBagConstraints(); gbConstraints.insets = new Inse... | 58440 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58440/ff074568ede98ddede5353ca62d513b0de039e17/HelloPanel.java/buggy/izpack-src/trunk/src/lib/com/izforge/izpack/panels/HelloPanel.java | [
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short getEndPC(Label labelTable[]) | short getEndPC(LabelTable table) | short getEndPC(Label labelTable[]) { short pc = labelTable[itsEndLabel & 0x7FFFFFFF].getPC(); if (pc == -1) throw new RuntimeException("end label not defined"); return pc; } | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/59fedca6b17819e313ac22545d4a0c523cfdf08c/ClassFileWriter.java/buggy/js/rhino/src/org/mozilla/classfile/ClassFileWriter.java | [
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case 594: { | case 595: { | public void ruleAction(int ruleNumber) { if (bad_rule != 0) return; switch (ruleNumber) { // // Rule 1: identifier ::= IDENTIFIER // case 1: { if (prsStream.getKind(btParser.getToken(1)) != X10Parsersym.TK_IDENTIFIER) ... | 1769 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1769/af3f97f921355862c552fa98c4a60e77625996f2/X10Parser.java/buggy/x10.compiler/src/x10/parser/X10Parser.java | [
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try { Provisioning prov = Provisioning.getInstance(); Account account = prov.getAccountById(authToken.getAccountId()); Zimlet z = prov.getZimlet(zimletName); boolean isAdmin = (authToken.isAdmin() || authToken.isDomainAdmin()); if (z.isExtension()) { if (!isAdmin) { ZimbraLog.zimlet.info("unauthorized request to zimle... | if (!zimletName.equals(com.zimbra.cs.zimlet.ZimletUtil.ZIMLET_DEV_DIR)) { try { Provisioning prov = Provisioning.getInstance(); Account account = prov.getAccountById(authToken.getAccountId()); Zimlet z = prov.getZimlet(zimletName); boolean isAdmin = (authToken.isAdmin() || authToken.isDomainAdmin()); if (z.isExtension(... | public void doFilter(ServletRequest request, ServletResponse response, FilterChain chain) throws IOException, ServletException { if (!isHttpReq(request, response)) { return; } HttpServletRequest req = (HttpServletRequest) request; HttpServletResponse resp = (HttpServletResponse) response; AuthToken aut... | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/77fc60171f8979771050ef6a0a6f87073e7a4515/ZimletFilter.java/clean/ZimbraServer/src/java/com/zimbra/cs/zimlet/ZimletFilter.java | [
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} else { sContext = SearchContext.newSearchContext(pageContext); pageContext.setAttribute(mVar, sContext, PageContext.REQUEST_SCOPE); | public void doTag() throws JspException, IOException { ZMailbox mailbox = getMailbox(); PageContext pageContext = (PageContext) getJspContext(); ServletRequest req = pageContext.getRequest(); int si = getInt(req, QP_SEARCH_INDEX, 0); int so = getInt(req, QP_SEARCH_OFFSET, 0); ... | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/0730982992a4e62fefa7990659e41af28bf829d3/ComputeSearchContextTag.java/clean/ZimbraTagLib/src/java/com/zimbra/cs/taglib/tag/ComputeSearchContextTag.java | [
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public void testAccumulateModify() throws Exception { //read in the source final Reader reader = new InputStreamReader( getClass().getResourceAsStream( "test_AccumulateModify.drl" ) ); final DrlParser parser = new DrlParser(); final PackageDescr packageDescr = parser.parse( reader ); ... | 31577 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/31577/8bf342687afa7ece5d554db21146984eff9076c8/IntegrationCases.java/clean/drools-compiler/src/test/java/org/drools/integrationtests/IntegrationCases.java | [
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addDomain( descs, "planning", "org.cougaar.planning.ldm.PlanningDomain"); | if (isPlanningEnabled) { addDomain( descs, "planning", "org.cougaar.planning.ldm.PlanningDomain"); } | public void load() { super.load(); domainSP = new DomainServiceProvider(new DomainServiceImpl(this)); serviceBroker.addService(DomainService.class, domainSP); domainForBlackboardSP = new DomainForBlackboardServiceProvider(new DomainForBlackboardServiceImpl(this)); serviceBroker.addService(DomainF... | 7981 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7981/2ebb49f74d5cae06c9f0b6ea0d57759fd5bc91f4/DomainManager.java/clean/core/src/org/cougaar/core/domain/DomainManager.java | [
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if (_target == null) throw new IllegalStateException("Target may not be null in synchronized dispatch"); | if (_target == null) { throw new IllegalStateException("Target may not be null in " + "synchronized dispatch"); } | private void synchronizedDispatch(Container cont) { if (_target == null) throw new IllegalStateException("Target may not be null in synchronized dispatch"); synchronized (_target) { dispatch(cont); } } | 7166 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7166/c9a43357d2e82ece30c25a3910d13430ab5013bf/UMLChangeDispatch.java/clean/src_new/org/argouml/uml/ui/UMLChangeDispatch.java | [
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public void mBOOL() throws RecognitionException { try { ruleNestingLevel++; int _type = BOOL; int _start = getCharIndex(); int _line = getLine(); int _charPosition = getCharPositionInLine(); int _channel = Token.DEFAULT_CHANNEL; // ... | 31577 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/31577/158de3e3177d9b48d45fb4c3fae8404e0f01f690/DRLLexer.java/clean/drools-compiler/src/main/java/org/drools/lang/DRLLexer.java | [
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map.put(key, properties); | PropertyManager.setResponseProperties(portletWindow, this.getHttpServletRequest(), _getHttpServletResponse(), props); | public void addProperty(String key, String value) { if (key == null) { throw new IllegalArgumentException("Property key == null"); } // get properties from PropertyManager Map map = PropertyManager.getRequestProperties(portletWindow, this.getHttpServletRequest()); ... | 51810 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51810/eea6e1a14b7683941fbec5a2fe976dd6a81bd5ce/PortletResponseImpl.java/clean/src/container/org/apache/pluto/core/impl/PortletResponseImpl.java | [
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System.out.println("Transaction terminated event recieved"); | if (transactionTerminatedEvent.isServerTransaction()) System.out.println("Transaction terminated event recieved" + transactionTerminatedEvent.getServerTransaction()); else System.out.println("Transaction terminated " + transactionTerminatedEvent.getClientTransaction()); | public void processTransactionTerminated( TransactionTerminatedEvent transactionTerminatedEvent) { System.out.println("Transaction terminated event recieved"); } | 7607 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7607/4f12c0c8b2fbf4bc0524f4624c4324731f35bcc9/Shootme.java/clean/trunk/src/examples/simplecallsetup/Shootme.java | [
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minX = minY = 0; maxX = width; maxY = height; | public SlimPlotter(String[] args) throws Exception { ProgressMonitor progress = new ProgressMonitor(null, "Launching SlimPlotter", "Initializing", 0, 23); progress.setMillisToPopup(0); progress.setMillisToDecideToPopup(0); int p = 0; // parse command line arguments String filename = null; Fi... | 49800 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49800/584e350d800a20cd44131b1c19500a33e19a265c/SlimPlotter.java/buggy/loci/slim/SlimPlotter.java | [
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unsafe.put(l.getIdent(), Boolean.TRUE); | unsafeField.add(l.getIdent()); | public Object visitAssignmentExpression(JAssignmentExpression self, JExpression left, JExpression right) { if((left instanceof JLocalVariableExpression)&&(righ... | 47772 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47772/36df840bed9d10465a8010782783234e19a026cd/ArrayDestroyer.java/buggy/streams/src/at/dms/kjc/sir/lowering/ArrayDestroyer.java | [
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public void setOwner(Object owner) { this.owner = owner; } | public void setOwner(Object owner) { this.owner = owner; } | public void setOwner(Object owner) { this.owner = owner; } | 54769 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54769/40effaf129249b2248e897d030f9998321d4020f/XMLDecoder.java/buggy/modules/beans/src/main/java/java/beans/XMLDecoder.java | [
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PsiLocalVariable var) { final PsiExpression strippedExpression = ParenthesesUtils.stripParentheses(exp); if (strippedExpression == null) { return false; } if (!(strippedExpression instanceof PsiAssignmentExpression)) { return false; } final PsiAssignmentExpression assignment = (PsiAssignmentExpression)strippedExpressio... | PsiLocalVariable var) { final PsiExpression strippedExpression = ParenthesesUtils.stripParentheses(exp); if (strippedExpression == null) { return false; } if (!(strippedExpression instanceof PsiAssignmentExpression)) { return false; } final PsiAssignmentExpression assignment = (PsiAssignmentExpression)strippedExpressio... | private static boolean expressionIsArrayMove(PsiExpression exp, PsiLocalVariable var) { final PsiExpression strippedExpression = ParenthesesUtils.stripParentheses(exp); if (strippedExpression == null) { return false; } if (!(strippedE... | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/e3503b4b6b4df6ff03ded1daf2f2a2d3c9436efd/ManualArrayCopyInspection.java/buggy/plugins/InspectionGadgets/src/com/siyeh/ig/performance/ManualArrayCopyInspection.java | [
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bottomGradientSaturation, bottomGradientValue, 1.0f); | bottomGradientSaturation, bottomGradientValue, 0.6f); | private void setGradientColours() { HSV col = new HSV(colour); // top gradient value from HSV model. float topGradientValue = col.getValue(); // bottom gradient value from HSV model. float bottomGradientValue = col.getValue(); // top and bottom gradien... | 55464 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55464/bd72dbfc5bee43ac7248328a84834b231b8e2d15/ColouredButtonUI.java/clean/SRC/org/openmicroscopy/shoola/util/ui/ColouredButtonUI.java | [
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int nr = getNrSubDirectories(id_directory); long retval[] = new long[nr]; String sql = "SELECT ID_DIRECTORY FROM R_DIRECTORY WHERE ID_DIRECTORY_PARENT = " + id_directory+" ORDER BY DIRECTORY_NAME"; ResultSet rs = database.openQuery(sql); Row r = database.getRow(rs); int i = 0; while (r != null) { retval[i] = r.getVal... | return getIDs("SELECT ID_DIRECTORY FROM R_DIRECTORY WHERE ID_DIRECTORY_PARENT = " + id_directory+" ORDER BY DIRECTORY_NAME"); | public synchronized long[] getSubDirectoryIDs(long id_directory) throws KettleDatabaseException { int nr = getNrSubDirectories(id_directory); long retval[] = new long[nr]; String sql = "SELECT ID_DIRECTORY FROM R_DIRECTORY WHERE ID_DIRECTORY_PARENT = " + id_directory+" ORDER BY DIRECTORY_NAME"; ResultSet rs = data... | 58146 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58146/a0a5ddc981c0d2e800a05eae092f13e17ea8ef4c/Repository.java/clean/kettle/src/be/ibridge/kettle/repository/Repository.java | [
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SearchUpdateReplyFoundJob reply = new SearchUpdateReplyFoundJob(_context, router, _state, _facade, this); SendTunnelMessageJob j = new SendTunnelMessageJob(_context, msg, outTunnelId, router.getIdentity().getHash(), | SearchUpdateReplyFoundJob reply = new SearchUpdateReplyFoundJob(getContext(), router, _state, _facade, this); SendTunnelMessageJob j = new SendTunnelMessageJob(getContext(), msg, outTunnelId, router.getIdentity().getHash(), | protected void sendLeaseSearch(RouterInfo router) { TunnelId inTunnelId = getInboundTunnelId(); if (inTunnelId == null) { _log.error("No tunnels to get search replies through! wtf!"); _context.jobQueue().addJob(new FailedJob(router)); return; } TunnelI... | 27437 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/27437/e737e5c9507ed0d463dc9e45a8f63657f466b177/SearchJob.java/buggy/router/java/src/net/i2p/router/networkdb/kademlia/SearchJob.java | [
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} catch (Exception e) { | } catch (Exception e) { | public Object clone() { AtomContainer o = null; ElectronContainer ec = null; ElectronContainer newEC = null; Atom[] natoms; Atom[] newAtoms; try { o = (AtomContainer)super.clone(); } catch (Exception e) { e.printStackTrace(System.err); } o.removeAllElements(); for (int f = 0; f < getAtomCount(); f++) ... | 45167 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45167/c8b7aeb7b034f27ff4ba3673bd77a90f5291d11e/AtomContainer.java/buggy/src/org/openscience/cdk/AtomContainer.java | [
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HashMap rendererOptions = new HashMap(); | Map rendererOptions = new java.util.HashMap(); | protected void runTest(Node testcase, Node test) { String id = test.getAttributes().getNamedItem("id").getNodeValue(); Node result = locateResult(testcase, id); boolean pass = false; if (result != null) { String agreement = result.getAttributes().getNamedItem("a... | 5268 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5268/b0e161758e010855acb9421e2b5150239e1d3d60/TestConverter.java/clean/src/org/apache/fop/tools/TestConverter.java | [
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byte opcode[] = { datagram[0], datagram[1], datagram[2], datagram[3] }; | byte opcode[] = { datagram[3], datagram[2], datagram[1], datagram[0] }; | public static int getFileIndex(byte [] datagram) { byte opcode[] = { datagram[0], datagram[1], datagram[2], datagram[3] }; ByteBuffer bb = ByteBuffer.wrap(opcode); return bb.getInt(); } | 8424 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8424/b3261fde8ec19f39d82e427af785b24956f9bcd6/UDPDatagramHeader.java/clean/src/parser/UDPDatagramHeader.java | [
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String primaryId = ViewFactory.extractPrimaryId(id); IViewDescriptor desc = reg.find(primaryId); | IViewDescriptor desc = reg.find(ref.getId()); | private float getFastViewWidthRatio(String id) { ViewLayoutRec rec = getViewLayoutRec(id, true); if (rec.fastViewWidthRatio == IPageLayout.INVALID_RATIO) { IViewRegistry reg = WorkbenchPlugin.getDefault().getViewRegistry(); String primaryId = ViewFactory.extractPrimaryId(id); ... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/37d97c7024313a102e062c0c7d5ba067b0a2fcb8/Perspective.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/Perspective.java | [
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return sds.isLong(); | return ( qualifiers & IS_LONG) != 0; | public boolean isLong() { return sds.isLong(); } | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/c885f752dad9daa1ee03dd2a57f8a759722c0252/CBasicType.java/buggy/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/dom/parser/c/CBasicType.java | [
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try { int res = makeCurrent(); if (res != CONTEXT_CURRENT) { throw new GLException("Unable to make context current to destroy tracked server-side OpenGL objects"); } try { tracker.unref(getGL()); } finally { release(); } } catch (GLException e) { if (DEBUG) { e.printStackTrace(); } } | tracker.unref(deletedObjectTracker); | public void destroy() { if (lock.isHeld()) { throw new GLException("Can not destroy context while it is current"); } if (tracker != null) { // Don't need to do anything for contexts that haven't been // created yet if (isCreated()) { // If we are tracking creation and destruction o... | 47702 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47702/6b66ec1550a1f022db2dda2db3fe473cbebfec85/GLContextImpl.java/buggy/src/classes/com/sun/opengl/impl/GLContextImpl.java | [
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switch (alignment) { | switch (verticalAlignment) { | public LinkedList getNextKnuthElements(LayoutContext context, int alignment) { MinOptMax ipd; curArea = get(context); LinkedList returnList = new LinkedList(); if (curArea == null) { setFinished(true); return null; } ... | 5268 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5268/609da8edaad8f2baf8f306e4d90d006b933ef30c/LeaderLayoutManager.java/buggy/src/java/org/apache/fop/layoutmgr/LeaderLayoutManager.java | [
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}else{ throw new RuntimeException("the node value for Date and Time patterns is null!!"); } } if(arr.first!=null){ return arr; } | } if(arr.first!=null){ return arr; } } | private ICUResourceWriter.Resource parseDTF(Node root, StringBuffer xpath){ // TODO change the ICU format to reflect LDML format /* * The prefered ICU format would be * timeFormats{ * default{} * full{} * long{} * medium{} * ... | 27800 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/27800/b73b43a8a192dbdd3e6db664456e615b3b416a16/LDML2ICUConverter.java/buggy/tools/java/org/unicode/cldr/icu/LDML2ICUConverter.java | [
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return recipientJID == null || recipientJID.getHost() == null || "".equals(recipientJID.getHost()) || recipientJID.getResource() == null || "".equals(recipientJID.getResource()); | return recipientJID == null || recipientJID.getHost() == null || "".equals(recipientJID.getHost()) || ((recipientJID.getName() == null || "".equals(recipientJID.getName())) && (recipientJID.getResource() == null || "".equals(recipientJID.getResource()))); | private boolean isLocalServer(XMPPAddress recipientJID) { // ridiculously long check for local server target // It's local if jid is null or host is null or resource is null return recipientJID == null || recipientJID.getHost() == null || "".equals(recipientJID.getHost()) || reci... | 6312 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6312/e373bdd89a2b9d00b96667a0501162fcd01352da/IQRouterImpl.java/buggy/src/java/org/jivesoftware/messenger/spi/IQRouterImpl.java | [
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ps = conn.prepareStatement(selectReferenceCount); ps.setString(1, (String)message.getMessageID()); int referenceCount = 0; ResultSet rs = ps.executeQuery(); if (rs.next()) { referenceCount = rs.getInt(1); } if (trace) { log.trace(JDBCUtil.statementToString(selectReferenceCount, message.getMessageID()) + " returned "... | ps = conn.prepareStatement(selectReferenceCount); ps.setString(1, (String)message.getMessageID()); int referenceCount = 0; ResultSet rs = ps.executeQuery(); if (rs.next()) { referenceCount = rs.getInt(1); } if (trace) { log.trace(JDBCUtil.statementToString(selectReferenceCount, message.getMessageID()) + " returned "... | protected void removeMessage(Message message, PreparedStatement ps) throws Exception { /* Reference counting code commented out until 1.2 // get the reference count from the database ps = conn.prepareStatement(selectReferenceCount); ps.setString(1, (String)message.getMess... | 3806 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3806/c7133c9662c41fb385b863c92214187907f2d1b0/JDBCPersistenceManager.java/buggy/src/main/org/jboss/messaging/core/plugin/JDBCPersistenceManager.java | [
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