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TST: restore xfail for test_apply
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2019-10-15T20:57:05Z
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MEMBER
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xref https://github.com/MacPython/pandas-wheels/pull/64
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CLN: Fix typing in pandas\tests\arrays\test_datetimelike.py (#28926)
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2019-10-15T21:32:37Z
2019-10-23T06:01:37Z
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CONTRIBUTOR
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- [x] partially adresses #28926 - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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Backport PR #29010 on branch 0.25.x (Setuptools CI fixup)
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Backport PR #29010: Setuptools CI fixup
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CLN: fix mypy error pandas/tests/plotting/test_backend.py
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2019-10-15T22:28:10Z
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CONTRIBUTOR
null
GH28926, mypy didn't like setting non-existant attribute on module. Dummy function, circumvented with `__setattr__` - [x] addresses part of #28926 - [x] tests added / passed - [x] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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DEPR: remove previously-deprecated broadcast/reduce kwargs from DataFrame.apply
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2019-10-15T22:36:45Z
2019-10-16T23:55:34Z
2019-10-16T23:53:50Z
MEMBER
null
xref #18577 (Nov 2017)
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rolling.apply extremely slow
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2019-10-16T01:03:59Z
2019-10-16T05:24:40Z
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CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python import numpy as np import pandas as pd size = 100000 df = pd.DataFrame( {"A": np.random.uniform(size=size)}, index=pd.date_range('2019-01-01', periods=size, freq='1min')) df.rolling("1H").mean() # 2.32 ms ± 54.7 µs per loop (mean ± std. ...
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29,019
Lack of existence of exponential smoother for irregularly spaced time-series
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2019-10-16T04:03:00Z
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CONTRIBUTOR
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#### Code Sample, a copy-pastable example if possible ```python import numpy as np import pandas as pd size = 10 df = pd.DataFrame( {"A": np.random.uniform(size=size), "ts": pd.date_range('2019-01-01', periods=size, freq='1min')} ) df["ts"] += pd.to_timedelta(df["A"] * 60, unit="s") df = df.set_ind...
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CLN: Use ABC classes where possible
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2019-10-16T04:27:04Z
2019-12-17T17:23:47Z
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NONE
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- [x] closes #27353 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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Fix mypy error in pandas\tests\indexes\interval\test_interval_tree.py
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2019-10-16T04:32:24Z
2019-11-08T13:04:35Z
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CONTRIBUTOR
null
- [x] relates to #28926 - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,022
fixed issue of mypy for test_ujson
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2019-10-16T07:09:41Z
2019-10-18T15:15:39Z
2019-10-18T15:15:30Z
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- [ ] xref #28926 - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,023
pd.concat inconsistent coercion of None depending of value in rows
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2019-10-16T09:08:27Z
2021-07-21T05:57:47Z
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#### Code example using pandas 0.25.1 ```python import pandas as pd a = pd.DataFrame({ "date_col": [pd.Timestamp("1990-06-08 00:00:00")], "foo": [0], }) b = pd.DataFrame({ "date_col": [None], "bar": [1] }) # Works as expected, None is converted to NaT print(pd.concat([a, b], sort=False...
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29,024
Inconsistent behavior for df.replace() with NaN, NaT and None
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2019-10-16T09:43:53Z
2021-10-05T23:45:14Z
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#### Code Sample, a copy-pastable example if possible ```python import datetime as dt import pandas as pd import numpy as np data = [ ['one', 1.0, pd.NaT], ['two', np.NaN, dt.datetime(2019, 2, 2)], [None, 3.0, dt.datetime(2019, 3, 3)] ] df = pd.DataFrame(data, columns=["Name", "Value", "Even...
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29,025
Incorrect json round-trip with orient='table' when dataframe contains duplicate index values
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2019-10-16T11:30:18Z
2020-05-08T21:18:22Z
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd df = pd.DataFrame({"col1": [1, 2]}, index=[0, 0]) print(pd.read_json(df.to_json(orient='table'), orient='table')) print(pd.read_json(df.to_json(orient='split'), orient='split')) ``` Output: ```python index col1 0 0 ...
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29,026
boolean_format parameter to to_csv
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2019-10-16T11:46:29Z
2021-07-21T06:06:17Z
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#### Code Sample ```python df.to_csv('data.csv', boolean_format='lower') ``` #### Problem description It would be nice if there was an option on formatting boolean values when saving to CSV. Possible options `{'lower', 'upper', 'title'}`.
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29,027
Installing numexpr breaks previously working pandas code
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2019-10-16T12:13:14Z
2019-10-26T20:44:22Z
2019-10-26T20:44:22Z
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd df = pd.DataFrame({'test':[[1,2],[2,3],[3,4]], 'other': [1,2,3]}) df.query('other.isnull()') ``` ```python import pandas as pd df = pd.DataFrame({'test':[[1,2],[2,3],[3,4]], 'other': [1,2,3]}) df[['other']].query('o...
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29,028
Backport PR #29013 on branch 0.25.x (TST: restore xfail for test_apply)
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2019-10-16T13:12:40Z
2019-10-16T14:42:44Z
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Backport PR #29013: TST: restore xfail for test_apply
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Python 3.8 build terminates on Travis CI.
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https://travis-ci.org/pandas-dev/pandas/jobs/598457821
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TST: Test key dtype cast after merge
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- [X] closes #17044 - [x] tests added / passed - [x] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,031
set locale to data frame with ambiguous local time leads to
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2019-10-16T16:06:14Z
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I read CSV-files with ambiguous local time -- ambiguous due to daylight saving time. When I apply `tz_localize()` I run in the following error: AmbiguousTimeError: There are %i dst switches when there should only be 1. Here is my code to reproduce the error. Note that from 2am to 3am every datetime is a d...
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Deprecate getting the name from MultiIndex.levels
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2019-10-16T16:15:00Z
2020-01-03T02:16:40Z
2020-01-03T02:16:40Z
CONTRIBUTOR
null
Follow up to https://github.com/pandas-dev/pandas/pull/27242. https://github.com/pandas-dev/pandas/pull/27242#issuecomment-542602004
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29,033
Inconsistent behavior between df.sum() and groupby(col).agg('sum') on lists
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2019-10-16T16:24:13Z
2021-07-21T06:07:45Z
null
NONE
null
```python df = pd.DataFrame({ 'id':[1,2,2], 'cost':[5,5,5], 'letters':[['a','b'],['a','b'],['a','b']] }) print(df.sum()) # joins lists in 'letters' column print(df.groupby('id').agg('sum')) # drops 'letters' column from results print(df.groupby('id').agg(pd.Series.sum)) # successfully joins lists in...
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507,964,190
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29,034
Drop Python 3.5 support
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17
2019-10-16T16:35:38Z
2019-11-08T14:48:11Z
2019-11-08T14:48:11Z
CONTRIBUTOR
null
As discussed in https://github.com/pandas-dev/pandas/issues/27492. The 0.25.x branch should be stable for the next release, so we can start on this at any time.
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507,979,051
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29,035
BUG: Fix TypeError in _cython_agg_blocks
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2
2019-10-16T17:02:49Z
2019-10-17T15:27:59Z
2019-10-17T12:37:48Z
MEMBER
null
and change one of the high-level `except Exception`s in groupby.groupby to `except (TypeError, NotImplementedError)`. The remaining `TypeError` will be addressed in a separate PR. Haven't decided about the remaining NotImplementedError. cc @jreback @WillAyd.
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29,036
Inconsistent processing of NaT values by GroupBy
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4
2019-10-16T17:15:04Z
2021-07-21T14:41:00Z
null
NONE
null
```python df = pd.DataFrame({'number': [1, 2, 3], 'time': [pd.NaT, pd.NaT, pd.NaT]}) interval_index = pd.interval_range( start=pd.to_timedelta('10 days'), end=pd.to_timedelta('15 days'), freq='1h' ) df.groupby( pd.cut(df['time'], bins=interval_index) )['number'].count() ``` The example above results in NaT value...
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29,037
Categorical column fails in groupby + transform.
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5
2019-10-16T17:19:41Z
2020-07-01T18:25:40Z
2020-07-01T18:25:40Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd # Create demo data for package delivery df = pd.DataFrame({'package_id': [1, 1, 1, 2, 2, 3], 'status': ['Waiting', 'OnTheWay', 'Delivered', 'Waiting', 'OnTheWay', 'Waiting']}) # Status column: Make ordinal...
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29,038
REF/PERF: PeriodEngine covers narrow type
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2019-10-16T17:22:21Z
2020-01-16T21:36:21Z
2020-01-16T21:36:21Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python pi = pd.period_range(start=2000, end=2019, freq="A") p = pd.Period(2010, freq="A") In [7]: pi._engine.get_loc(p) --------------------------------------------------------------------------- KeyE...
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29,039
max() function - returns wrong value with categorical Series
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2019-10-16T17:28:11Z
2019-10-18T03:10:13Z
2019-10-17T21:24:40Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd # Create demo data for package delivery df = pd.DataFrame({'package_id': [1, 1, 1, 2, 2, 3], 'status': ['Waiting', 'OnTheWay', 'Delivered', 'Waiting', 'OnTheWay', 'Waiting']}) # Status column: Make ordinal...
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29,040
REF: remove groupby_helper
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5
2019-10-16T19:54:03Z
2019-10-18T17:31:45Z
2019-10-18T17:28:04Z
MEMBER
null
no longer necessary now that the funcs there use fused types.
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29,041
Fix mypy in pandas/tests/arithmetic/test_datetime64.py
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2019-10-16T20:32:01Z
2019-12-27T19:40:44Z
2019-12-27T19:40:43Z
CONTRIBUTOR
null
GH28926, mypy did not like DatetimeIndex's __new__, and couldn't find a method - [x] addresses part of #28926 - [x] tests added / passed - [x] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,042
BUG: read_csv with trailing comma, specified header names and usecols gives confusing error
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2019-10-16T20:33:37Z
2020-12-13T17:37:12Z
2020-12-13T17:37:04Z
MEMBER
null
Encountered this somewhat strange case: in case you have a malformed file (trailing comma's), we typically set the first column as the index. But if you also pass custom names, and use `usecols`, in that case you get a cryptic error message: ``` import io s = """a, b, c, d 1,2,3,4, 5,6,7,8,""" ``` ``` ...
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508,130,936
MDU6SXNzdWU1MDgxMzA5MzY=
29,043
Pandas will not install on Python 3.8 Docker Image
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3
2019-10-16T22:24:01Z
2021-07-26T07:06:47Z
2019-10-17T19:49:04Z
NONE
null
#### Code Sample, a copy-pastable example if possible Use this dockerfile ``` FROM python:3.8-slim RUN pip install pandas ``` #### Problem description Running "docker build . -f <above_docker_file>" results in the error seen below. If I change the dockerfile to be "python:3.7-slim" then pandas installs. The ...
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MDExOlB1bGxSZXF1ZXN0MzI4OTk1OTUx
29,044
REF: use fused types in algos_rank_helper
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2019-10-16T23:08:34Z
2019-10-18T22:19:12Z
2019-10-18T21:29:56Z
MEMBER
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508,160,688
MDU6SXNzdWU1MDgxNjA2ODg=
29,045
single row DataFrame to Series conversion
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2019-10-17T00:05:05Z
2021-07-21T06:14:03Z
2021-07-21T06:14:02Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python # prepare data s = pd.Series(np.arange(4), index=pd.MultiIndex.from_product([list('ab'), list('cd')])) # note the index 'i' is constant so that groupby would produce a single group df = pd.DataFrame.from_dict({'i': [True, True, True, True], 'x': np....
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508,166,943
MDExOlB1bGxSZXF1ZXN0MzI5MDEzODk1
29,046
CLN: Fixing mypy errors in pandas/conftest.py
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2019-10-17T00:30:25Z
2020-03-25T23:51:19Z
2020-03-25T23:51:10Z
CONTRIBUTOR
null
- [x] xref #28926 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] ~whatsnew entry~
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508,195,340
MDExOlB1bGxSZXF1ZXN0MzI5MDM2MTA0
29,047
CLN: derivation of nogil param
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4
2019-10-17T02:30:50Z
2019-10-18T17:35:35Z
2019-10-18T17:27:30Z
MEMBER
null
This moves the `nogil` parameter of in the template from being hard-coded to being derived from the other parameters. This changes the parameter value on line 18 (int8/int8) which currently has `nogil=False` which I think is incorrect.
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29,048
About "fillna()"...kind like a bug?
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6
2019-10-17T06:40:58Z
2019-10-17T13:03:23Z
2019-10-17T13:03:15Z
NONE
null
Actually I wanna replace NaN with "mode" value of the variable. But the following code doesn't work. ```python # Your code here a = df.Embarked.mode() df.Embarked[df.Embarked.isna()].replace(a.values[0], inplace=True) df.Embarked[df.Embarked.isna()] >>>61 NaN 829 NaN Name: Embarked, dtype: object ```
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29,049
Multiple dateoffsets in Holiday raises a TypeError
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2019-10-17T09:26:33Z
2021-07-21T06:14:31Z
null
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd from pandas.tseries.holiday import Holiday, USThanksgivingDay blackfriday = Holiday('Black Friday', month=USThanksgivingDay.month, day=USThanksgivingDay.day, offset=[USThanksgivingDay.offset, pd.DateOffset(1)]) cybermonday = Holi...
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508,389,734
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29,050
Support customised S3 servers endpoint URL
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2019-10-17T10:42:31Z
2020-01-07T14:24:53Z
2019-10-22T12:57:42Z
NONE
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Add support for customised S3 servers via checking the environment variable `S3_ENDPOINT`. If set, the value of `S3_ENDPOINT` will be passed to th...
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508,443,787
MDU6SXNzdWU1MDg0NDM3ODc=
29,051
BUG: inconsistent behaviour of Groupby (probably a regression)
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2019-10-17T12:32:37Z
2019-10-17T12:39:07Z
2019-10-17T12:36:41Z
NONE
null
First, thank you very much for your work ! I love pandas ! The problem #### Code Sample ```python import pandas as pd # intialise data of lists. data = {'Fruit':['Apple', 'Orange', 'Apple'], 'Origin':['France', 'France', 'Spain'], 'Price':[10, 15, 20]} # Create DataFrame without categ...
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508,493,870
MDU6SXNzdWU1MDg0OTM4NzA=
29,052
df.apply(lambda x: x.name, axis=1) lose timezone info when df.index is tz-aware.
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2019-10-17T13:55:51Z
2019-10-20T13:49:55Z
2019-10-20T13:49:55Z
NONE
null
#### Copy-pastable Code Sample ```python import pandas as pd df = pd.DataFrame( data=[0, 1, 2], index=[ pd.Timestamp('2019-03-15 12:34:31.909000+0000', tz='UTC'), pd.Timestamp('2019-03-15 12:34:34.359000+0000', tz='UTC'), pd.Timestamp('2019-03-15 12:34:34.660000+0000', tz='UT...
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29,053
CI: failing builds on master
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3
2019-10-17T14:15:05Z
2019-10-17T22:56:46Z
2019-10-17T22:56:45Z
CONTRIBUTOR
null
https://travis-ci.org/pandas-dev/pandas/builds/599134469 looks like some issues on 3.8, 3.6 allowed failure builds (i know has been failing a while) should address these before merging other changes. cc @pandas-dev/pandas-core
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29,054
ENH: Allow read_pickle to accept file-like objects
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2019-10-17T15:38:30Z
2020-09-05T14:50:04Z
2020-09-05T14:50:04Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python # Your code here import portalocker with portalocker.Lock("/path/to/file.pickle", "rb+", timeout=60) as file: file.seek(0) # not sure why I had this from before but it shouldn't cause an issue right? df = pd.read_pickle(file) ...
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29,055
URL treated as local file for read_feather
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9
2019-10-17T16:02:49Z
2020-04-26T20:34:07Z
2020-04-26T19:31:34Z
NONE
null
Not sure if this is a pandas issue or pyarrow, but when I try to read from a URL: ```python import pandas as pd pd.read_feather("https://github.com/wesm/feather/raw/master/R/inst/feather/iris.feather") ``` I get the following error: ``` Traceback (most recent call last): File "<string>", line 1, in <module> ...
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29,056
Feature request: improve behavior of ambiguous='infer' of tz_localize()
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2019-10-17T16:26:41Z
2019-10-19T18:18:58Z
2019-10-19T18:18:58Z
NONE
null
[I first thought it was a bug, but it is actually a missing feautre.](https://github.com/pandas-dev/pandas/issues/29031) When I apply `tz_localize()` I run in the following error: AmbiguousTimeError: There are %i dst switches when there should only be 1. Here is my code to reproduce the error. Note that fr...
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29,057
CI: xfail on numpy 1.18
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2019-10-17T16:48:26Z
2019-10-17T18:50:31Z
2019-10-17T18:25:48Z
MEMBER
null
xref #29053 i think this addresses the failing azure builds, not sure about Travis. Will open an issue for a longer-term fix.
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29,058
BUG/compat: accum funcs changed in numpy 1.18
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2019-10-17T16:50:47Z
2019-12-25T23:27:30Z
2019-12-25T23:27:30Z
MEMBER
null
#29057 xfails some tests that are broken with numpy 1.18, which changes the behavior of np.minimum.accumulate on dt64/td64 arrays: ``` s = pd.Series( pd.to_datetime(["NaT", "2000-1-2", "NaT", "2000-1-1", "NaT", "2000-1-3"]) ) >>> np.minimum.accumulate(s.values) # numpy 1.17 array([ ...
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29,059
Backport PR #29057 on branch 0.25.x (CI: xfail on numpy 1.18)
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2019-10-17T18:26:13Z
2019-10-17T19:45:40Z
2019-10-17T19:45:40Z
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Backport PR #29057: CI: xfail on numpy 1.18
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29,060
Stop catching TypeError in groupby methods
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2019-10-17T18:49:16Z
2019-10-17T22:55:26Z
2019-10-17T22:17:14Z
MEMBER
null
cc @WillAyd @jreback Note this doesn't touch cython_agg_blocks, I've run out of things to meddle with there. Open to suggestions for the DecimalArray case.
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29,061
API: Restore getting name from MultiIndex level
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9
2019-10-17T19:03:24Z
2019-10-18T21:57:27Z
2019-10-18T12:43:35Z
CONTRIBUTOR
null
xref https://issues.apache.org/jira/browse/ARROW-6922 / https://github.com/pandas-dev/pandas/pull/27242#issuecomment-543302582 / https://github.com/pandas-dev/pandas/issues/29032 No docs yet, since it isn't clear how this will eventually sort out. But we at least want to preserve this behavior for 1.0 cc @jori...
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29,062
REF: Store metadata in an attrs dict
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11
2019-10-17T20:50:41Z
2020-02-13T19:11:27Z
2019-10-22T12:42:16Z
CONTRIBUTOR
null
This aids in the implementation of https://github.com/pandas-dev/pandas/pull/28394. Over there, I'm having issues with using `NDFrame.__finalize__` to copy attributes, in part because getattribute on NDFrame is so complicated. This simplifies that PR because we only need to look in NDFrame.attrs (name borrowed fr...
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29,063
TST: regression test for groupby with datetime and timedelta (#15562)
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2019-10-17T21:19:13Z
2019-10-19T17:11:19Z
2019-10-19T17:11:16Z
CONTRIBUTOR
null
- [X] closes #15562 - [X] tests added / passed - [X] passes `black pandas` - [X] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry This change doesn't add a new feature but adds an regression test for #15562 which has been fixed with pandas 0.20. Hence there is no whatsnew entry...
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29,064
Remove numpy references from pandas._typing
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2019-10-18T00:08:57Z
2021-01-12T17:54:54Z
2021-01-12T17:53:20Z
MEMBER
null
Because we don't have type information from numpy AND because we specifically ignore_missing_imports for that in our setup, any numpy types currently resolve to `Any`. This may cause surprising behavior if not scrutinized... To illustrate, we currently define `DType` in pandas._typing as `Dtype = Union[str, np.dtype...
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CLN: simplify take_2d_multi
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2019-10-18T00:56:13Z
2019-10-18T19:44:40Z
2019-10-18T19:34:45Z
MEMBER
null
It is only called from one place in `DataFrame._reindex_multi`, so we can rule out a bunch of cases about the args/kwargs. Separate branches for simplifying algos_take_helper are going to be nice
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29,066
CLN: Exception in NDFrame._maybe_update_cacher
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2019-10-18T02:20:04Z
2019-10-22T15:02:55Z
2019-10-22T12:41:07Z
MEMBER
null
Only need to catch AssertionError
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TST: add regression test for all-none-groupby
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1
2019-10-18T09:42:59Z
2019-10-18T17:32:55Z
2019-10-18T17:32:52Z
CONTRIBUTOR
null
- [X] closes #21624 - [X] tests added / passed - [X] passes `black pandas` - [X] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Is the whatsnew entry required if the fix was somewhat silent and only a regression test was added?
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29,068
DOC: updated categorical docstring
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2019-10-18T11:02:25Z
2019-10-19T00:10:42Z
2019-10-18T23:57:38Z
CONTRIBUTOR
null
- [ ] closes #xxxx - [ ] tests added / passed *(tests failed even on master)* - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry I think `api.types.CategoricalDtype` in *see also* section of [pandas.Categorical](https://pandas.pydata.org/pandas-d...
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29,069
Index.name is not validatied to be Hashable
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2019-10-18T12:10:28Z
2019-12-27T16:00:52Z
2019-12-27T16:00:52Z
CONTRIBUTOR
null
We require that Series.name be hashable. We don't do the same for Index.name. Should we? ```python In [4]: pd.Index([], name=[]) Out[4]: Index([], dtype='object', name=[]) ``` ```python In [5]: pd.Series([], name=[]) --------------------------------------------------------------------------- TypeError ...
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Warnings from IPython tab completion tests
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2019-10-18T12:45:55Z
2020-01-04T23:12:48Z
2020-01-04T23:12:35Z
CONTRIBUTOR
null
At some point, IPython changed their code to be async. Now, our tests using their tab completion stuff causes warnings. ``` $ pytest pandas/tests/ -k test_tab_complete_warning ================================================================================= warnings summary =====================================...
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29,071
TST: Add regression test for Series dropping uint datatype (#18311)
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2019-10-18T13:15:58Z
2019-10-22T12:40:30Z
2019-10-22T12:40:26Z
CONTRIBUTOR
null
- [x] closes #18311 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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29,072
Sticky header and index for large data frames in Jupyter
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2019-10-18T13:21:26Z
2021-09-23T19:42:05Z
2021-06-17T23:59:40Z
NONE
null
## Problem description When displaying a large data frame in Jupyter the number of columns will be limited by `max_cols` set in the default setting, and all the rows will be displayed. I would like to add an option in the default settings so that large data frames will be displayed with a sticky header and index a...
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29,073
DOCS: Errors PR08 PR09 in pandas.Period
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2019-10-18T13:34:27Z
2019-10-23T16:07:23Z
2019-10-23T16:07:23Z
CONTRIBUTOR
null
Subset of #28602 (PR09) and #25232 (PR08) for #27977 (docstrings validation). pandas/_libs/tslibs/period.pyx ``` python scripts/validate_docstrings.py --errors=PR08 python scripts/validate_docstrings.py --errors=PR09 python scripts/validate_docstrings.py pandas.Period ``` ``` pandas.Period: Parameter "...
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29,074
ValueError: DataFrame columns must be unique for orient='records'
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2019-10-18T14:15:26Z
2019-10-18T14:38:47Z
2019-10-18T14:38:41Z
NONE
null
#### Code Sample ```python # Extract particular column selected_dataUrl_columns = pd.DataFrame(dataTableSession.query(dataTable).filter(dataTable.c.dataId.in_(media_id_list)).all())['dataUrl'].reset_index(drop=True) # combine the column with the active_campaign dataframe campaign_info = pd.concat([active_campa...
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29,075
Passing a psycopg2 connection to read_sql can cause table locks
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2019-10-18T15:20:36Z
2021-06-28T15:42:38Z
2021-06-28T15:42:38Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import psycopg2 import sqlalchemy as sa import pandas as pd conn = psycopg2.connect(**{CREDENTIALS}) df = pd.read_csv('select foo from bar', conn) ``` #### Problem description `read_sql` allows for an engine or a connection to be passed in...
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29,076
GraphQL support / accessor plugin system
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2
2019-10-18T15:33:09Z
2019-12-01T21:22:42Z
null
NONE
null
I recently added graphql support in [vaex](https://github.com/vaexio/vaex) (another dataframe library), and just added support for pandas as well: https://github.com/vaexio/vaex/pull/446 However, this is only available after importing vaex.graphql, e.g.: ![image](https://user-images.githubusercontent.com/1765949/67...
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29,077
CLN: catch less in groupby
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2019-10-18T16:13:44Z
2019-10-21T21:15:17Z
2019-10-18T17:57:55Z
MEMBER
null
This is the second place where the DecimalArray case has popped up, will move to fix that before too long.
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29,078
CLN: tighten exception catching in indexes
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2019-10-18T18:21:45Z
2019-10-19T02:27:54Z
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29,079
DOC: mad description incorrectly includes 'numeric_only'
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2019-10-18T18:37:33Z
2020-02-09T17:19:45Z
2020-02-09T17:19:45Z
NONE
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#### Problem description I noticed a small mismatch between the function signature of `mad` and its description here: * https://pandas-docs.github.io/pandas-docs-travis/reference/api/pandas.DataFrame.mad.html?highlight=mad#pandas.DataFrame.mad The function signature is correct: > DataFrame.mad(self, axis=No...
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29,080
pandas pivot_table aggfunc/values parameters behaving oddly
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2019-10-18T20:00:46Z
2021-08-31T05:10:23Z
null
NONE
null
```python np.random.seed(0) test = pd.DataFrame({ 'a' : np.random.randint(0, 10, size=(10,)), 'b' : np.random.randint(0, 10, size=(10,)), 'c' : np.random.randint(0, 10, size=(10,)), 'd' : np.random.randint(0, 10, size=(10,)), }) tp = test.pivot_table(index=[ 'a', ], columns=[ 'b',...
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29,081
`values=['c']` returns `aggfunc` on all columns, instead of just the passed column
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2019-10-18T20:44:46Z
2020-01-01T21:02:02Z
2020-01-01T21:02:02Z
NONE
null
- [ ] closes #29080
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29,082
df[:0] returns KeyError when index is float64 and non-monotonic
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2019-10-18T20:52:21Z
2021-07-21T06:17:18Z
2021-07-21T06:17:18Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python >>> df = pd.DataFrame({'a': [3.0, 1.0, 2.0], 'b':[5, 6, 7]}).set_index('a') >>> df[:0] KeyError: 0.0 ``` #### Problem description In many cases `df[:0]` effectively returns the metadata for a dataframe, i.e. ``` Empty DataFrame Columns: [b...
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29,083
TST: 2d index when constructing dataframe (#25416).
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2019-10-18T22:31:39Z
2019-10-19T17:08:40Z
2019-10-19T17:08:36Z
CONTRIBUTOR
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- [X] closes #25416 - [X] tests added / passed - [X] passes `black pandas` - [X] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry This change adds a regression test to check for the handling of 2d index when creating a dataframe (#25416). Since there is no visible change no ...
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[#22550] Remove TestData from series-tests test_operators.py
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2019-10-18T22:55:48Z
2019-10-19T17:07:15Z
2019-10-19T17:07:11Z
CONTRIBUTOR
null
Part of #22550 Replaced TestData usage in `pandas/tests/series/test_operators.py` with`datetime_series` fixture - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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CLN: Exception in DataFrame._reduce
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2019-10-19T00:04:52Z
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MEMBER
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one of two in this method
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REF: remove algos_rank_helper
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2019-10-19T00:52:00Z
2019-10-19T17:11:28Z
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MEMBER
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No longer needed since the functions in it use fused types.
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Correcting Warnings from IPython tab completion tests with async tests
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2019-10-19T01:36:09Z
2020-01-04T18:21:28Z
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CONTRIBUTOR
null
- [ ] closes #29070 - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry I tried to follow what Tom said in the issue but I don't really know how to integrate with CI. I was in doubt too with how to import pytest-asyncio as well. Maybe both questio...
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CLN: Exception in _aggregate_frame
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2019-10-19T02:14:48Z
2019-10-19T17:12:04Z
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MEMBER
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cc @jreback @WillAyd Next groupby-based branch I'm going to focus on the TODOs that have been introduced over this sequence of PRs before continuing to prune the Exceptions.
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2019-10-19T17:13:05Z
MEMBER
null
Started as simplifying the templating for algos_take_helper. There are some complications that make moving that to fused types non-trivial, but this gets us to a place where its a viable option.
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29,090
Running pytest locally
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4
2019-10-19T07:03:03Z
2019-10-22T01:12:41Z
2019-10-22T01:12:41Z
CONTRIBUTOR
null
When I run ```python pytest pandas ``` locally, I get the following error. ```python ImportError while loading conftest '/Users/mohitanand/pandas/pandas/conftest.py'. pandas/conftest.py:13: in <module> import pandas.util._test_decorators as td pandas/util/_test_decorators.py:183: in <module> _skip_i...
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29,091
DataFrame.corrwith(otherDataFrame) has confusing behavior and potential bug
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1
2019-10-19T07:14:22Z
2019-10-19T13:31:29Z
2019-10-19T13:31:24Z
NONE
null
### Code Sample ```python import pandas as pd import numpy as np f = lambda: np.random.normal(0, 1, n) df_x = pd.DataFrame({'x1':f(), 'x2':f(), 'x3':f()}) df_y = pd.DataFrame({'y1':f(), 'y2':f()}) df_x.corrwith(df_y) ``` output is ``` x1 NaN x2 NaN x3 NaN y1 NaN y2 NaN dtype: float6...
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29,092
What's new link in the 0.25.2 release description is broken
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2019-10-19T07:58:46Z
2019-10-19T12:38:43Z
2019-10-19T12:38:43Z
NONE
null
Not sure whether this should be reported here or in the documentation repository. "Whatsnew" link in the release description here https://github.com/pandas-dev/pandas/releases leads to the following url https://pandas.pydata.org/pandas-docs/version/0.25/whatsnew/v0.25.2.html which return 404 error.
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29,093
TST: Add regression test for Series index.map failing (#20990)
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2019-10-19T08:15:16Z
2019-11-18T17:06:37Z
2019-11-18T17:06:26Z
CONTRIBUTOR
null
- [x] closes #20990 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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509,431,088
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29,094
Feature request: Add _libs.* native support to cython
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2019-10-19T10:33:34Z
2019-11-03T07:58:15Z
2019-11-03T07:58:15Z
NONE
null
Hi, cython newbie here, if pandas adds C interface of _libs, that is so convenient. just like: cimport pandas as pd Thanks.
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29,095
Excel formula injection in pandas .to_excel()
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10
2019-10-19T13:05:47Z
2021-07-06T13:00:54Z
null
CONTRIBUTOR
null
#### Code Sample ```python import pandas as pd df = pd.DataFrame([ "simple string", "=2+5+cmd|' /C calc'!A0", ]) df.to_excel("pandas_minimal.xlsx", header=False, index=False, engine="openpyxl") ``` #### Problem description When exporting DataFrames to Excel files (.xlsx) , pandas converts string...
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29,096
[#22550] Remove TestData from series-tests test_quantile.py
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2019-10-19T13:08:46Z
2019-10-19T16:55:08Z
2019-10-19T15:50:57Z
CONTRIBUTOR
null
Part of #22550 Replaced TestData usage in `pandas/tests/series/test_quantile.py` with `datetime_series` fixture - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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29,097
TST: Add a regression test for the timezone issue
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2019-10-19T13:44:18Z
2019-10-20T13:50:03Z
2019-10-20T13:49:55Z
CONTRIBUTOR
null
Add a regression test to ensure that the timezone doesn't get removed when using `df.apply`. - [x] closes #29052 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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29,098
BUG: parse_time_string failing to raise TypeError
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2019-10-19T15:22:45Z
2019-10-19T18:30:42Z
2019-10-19T18:14:22Z
MEMBER
null
Cleans up one of the TODOs introduced in recent groupby work. Adds some type annotations along the way.
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29,099
TST: stop suppressing plot test exceptions, xfail broken test
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1
2019-10-19T16:20:12Z
2019-10-22T15:09:28Z
2019-10-22T12:39:24Z
MEMBER
null
Taking another stab at #28649. I think there was another discussion somewhere else trying to troubleshoot the test that is xfailed here, but haven't found it yet.
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29,100
BUG: fix AttributeError raised in libreduction
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2019-10-19T16:23:17Z
2019-10-22T15:05:18Z
2019-10-22T12:23:59Z
MEMBER
null
Bite-sized chunk of the promised "addressing of recently-added TODOs" for groupby Exception un-suppression. cc @WillAyd @jreback.
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29,101
[#22550] Remove TestData from series-tests test_rank.py
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2019-10-19T17:26:30Z
2019-10-24T12:11:00Z
2019-10-24T12:10:57Z
CONTRIBUTOR
null
Part of #22550 * Replaced TestData usage in `pandas/tests/series/test_rank.py` with fixtures * Switched from class-based test approach to function-based (**Note:** This is why the diff is so big) - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8...
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29,102
Misleading error messages when opening inexistent json file
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7
2019-10-19T18:12:43Z
2020-05-24T20:36:45Z
null
MEMBER
null
When opening a json file that doesn't exist with `read_json`, we get a `ValueError` with error messages like: ```python >>> import pandas >>> pandas.read_json('no_file.json') ValueError: Unexpected character found when decoding 'null' >>> pandas.read_json('a_dir/no_file.json') ValueError: Expected object or v...
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29,103
BUG: fix TypeError raised in maybe_downcast_numeric
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2019-10-19T18:34:42Z
2019-10-23T01:54:38Z
2019-10-23T01:38:57Z
MEMBER
null
Part of the groupby-Exception whittling; cc @WillAyd @jreback
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29,104
Added code to check if file exists for read_json.
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2019-10-19T19:08:41Z
2020-05-24T08:13:58Z
2019-12-10T16:54:07Z
CONTRIBUTOR
null
- [x] closes #29102 - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,105
Should Series.diff() have an axis argument?
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4
2019-10-19T22:55:06Z
2020-05-07T03:52:02Z
null
CONTRIBUTOR
null
I suggest that `Series.diff()` method should have `axis` argument to align its signature with the signature of `DataFrame.diff()`. This way it'd be easier to write polymorphic functions that could take both series and dataframes. ```python # Series x.diff(periods=1) # DataFrame df.diff(periods=1, axis=0) ``` M...
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29,106
BUG: IndexError in libreduction
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2019-10-20T00:39:56Z
2019-11-21T20:00:16Z
2019-10-25T18:04:42Z
MEMBER
null
cc @WillAyd @jreback another from the groupby-Exception follow-ups.
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29,107
WEB: Improvements to the contribute page
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2019-10-20T04:05:16Z
2019-11-04T22:21:27Z
2019-11-04T22:21:27Z
MEMBER
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![contribute_page](https://user-images.githubusercontent.com/10058240/67154550-c9d16a80-f2c3-11e9-9664-87390766f1e3.png)
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29,108
Fix mypy errors tests.series.test_constructors
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1
2019-10-20T06:07:17Z
2019-10-21T06:50:04Z
2019-10-21T06:49:55Z
CONTRIBUTOR
null
xref #28926 - [x] closes a subtask of #28296 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,109
Travis CI and codecov failing
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2019-10-20T06:31:41Z
2019-10-20T10:31:42Z
2019-10-20T10:31:42Z
CONTRIBUTOR
null
https://travis-ci.org/pandas-dev/pandas/jobs/600239741 > No output has been received in the last 10m0s, this potentially indicates a stalled build or something wrong with the build itself. https://codecov.io/gh/pandas-dev/pandas/compare/96cc8101779ff578426463d088b0f1a1fb554591...1a35eeb1408b464bcc5f163dd3c33d61cc...
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29,110
Fix mypy errors tests.dtypes.test_common
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2019-10-20T06:41:42Z
2019-11-17T16:19:12Z
2019-11-17T16:19:11Z
CONTRIBUTOR
null
xref #28926 - [x] xref #28926 - [x] tests passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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29,111
API: Remove nan-likes from MultiIndex levels
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2019-10-20T09:54:58Z
2021-07-21T06:18:36Z
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CONTRIBUTOR
null
Working on #27138 I've found that ``MultiIndex`` keeps nan-likes in the levels, but encode them all to -1: ```python >>> levels, codes = [[nan, None, pd.NaT, 128, 2]], [[0, -1, 1, 2, 3, 4]] >>> mi = pd.MultiIndex(levels, codes) >>> mi.codes[0] [-1, -1, -1, -1, 3, 4] >>> mi.levels[0] Index([nan, None, NaT, 128,...
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29,112
DOC: the description of activating virtual env with pip under windows is not correct
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2019-10-20T10:29:27Z
2019-11-01T23:18:32Z
2019-11-01T23:18:32Z
CONTRIBUTOR
null
#### Problem description Hello everybody, yesterday I tried to setup pandas dev environment under Windows. I have python only 3.7.5 installed. In doc/source/development/contributing.rst is described how I can setup a dev environment and one of the steps is creating a virtual environment with pip. There is an i...
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