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https://api.github.com/repos/pandas-dev/pandas/issues/28213
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28,213
BUG: Fix issue with apply on empty DataFrame
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12
2019-08-29T04:09:10Z
2020-04-09T02:37:34Z
2019-09-20T03:36:07Z
MEMBER
null
Fixes a bug where the return value for certain functions was hard-coded as `np.nan` when operating on an empty `DataFrame`. Before ```python >>> import numpy as np >>> import pandas as pd >>> df = pd.DataFrame(columns=["a", "b", "c"]) >>> df.apply(np.sum) a NaN b NaN c NaN dtype: float64 >>> df.apply...
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28,214
I have a problem about upgrading my packages in pycharm
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2019-08-29T06:07:29Z
2019-08-29T06:07:28Z
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I am trying to upgrade the versus of BeautifulSoup4 from 4.6.0 to 4.8.0 and pip from 18.0 to 19.2.3 which are newest versions. So via the terminal, I used `python -m pip install -U bs4` and `pip install --upgrade pip`. The thing is these two packages are actually installed successfully, but the upgrading is failed....
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28,215
Add function to clean up column names with special characters
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2019-08-29T10:25:38Z
2020-01-05T13:32:27Z
2020-01-04T19:07:05Z
CONTRIBUTOR
null
Changed the backtick quoting functions so that you can also use backtick quoting to use invalid Python identifiers like ones that start with a digit, start with a number, or are separated by operators instead of spaces. - [x] closes #27017 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git ...
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28,216
REGR: <th> tags for notebook display closes #28204
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2019-08-29T11:04:53Z
2019-08-30T23:40:27Z
2019-08-30T17:06:50Z
MEMBER
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- [ ] closes #28204 - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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28,217
DOC: Update index parameter in pandas to_parquet
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2019-08-29T12:52:00Z
2019-09-16T12:45:17Z
2019-09-16T11:50:20Z
CONTRIBUTOR
null
- [ ] closes #xxxx (reference: https://github.com/python-sprints/pandas-mentoring/issues/156) - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry The documentation ([https://dev.pandas.io/reference/api/pandas.DataFrame.t...
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28,218
df.to_html display full output when using option to set display.max_colwidth
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2019-08-29T13:39:24Z
2021-09-09T14:05:43Z
null
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#### Code Sample ```python import pandas as pd df = pd.DataFrame(data={ 'test': ['abcdefghijklmnopqrstuvwxyz', 'aaaabbbbbbccccccddddddeeeeefffff'], }) pd.set_option('display.max_colwidth', 10) df.to_html(escape=False, notebook=False) ``` #### Problem description While we are working on issue htt...
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28,219
Problem with lzma module
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2019-08-29T13:40:07Z
2021-11-20T07:43:47Z
2019-08-29T20:18:54Z
NONE
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`/usr/local/lib/python3.7/site-packages/pandas/compat/__init__.py:84: UserWarning: Could not import the lzma module. Your installed Python is incomplete. Attempting to use lzma compression will result in a RuntimeError.` I get this error when I run the code and I don't know how to fix it
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pd.merge regression when doing a left-join with missing data on the right. Result has a Float64Index
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2019-08-29T14:26:55Z
2019-09-28T21:13:23Z
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CONTRIBUTOR
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd X = pd.DataFrame({ "count": [1, 2] }, index=["A", "B"]) Y = pd.DataFrame({"name": ["A", "C"], "value": [100, 200]}) Z = pd.merge(X, Y, left_index=True, right_on="name", how='left') print(Z.to_string()) # in 0.23.4 # count...
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28,221
Fix read of py27 pytables tz attribute, gh#26443
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2019-08-29T14:50:35Z
2019-08-30T17:08:34Z
2019-08-30T17:08:33Z
CONTRIBUTOR
null
When created by python 2.7, the "tz" attribute will be created with CSET H5T_CSET_ASCII instead of H5T_CSET_UTF8, therefore it is read as bytes when string is expected. - [ X] closes #26443 - [ X] tests added / passed - [ X] passes `black pandas` - [ X] passes `git diff upstream/master -u -- "*.py" | flake8 --d...
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28,222
Implement str.contains for Dataframes so it can be used on multiple columns at once
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2019-08-29T16:33:19Z
2019-08-30T07:46:22Z
2019-08-30T07:43:41Z
NONE
null
Hi all, I would like to be able to utilise str.contains to return a boolean of all of the cells in a DataFrame that at least partially match a certain string. Currently this can only be applied for a single column at a time as it is only implemented for Series, and my searching has not found an elegant solution for ...
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28,223
CLN: minor typos MutliIndex -> MultiIndex
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2019-08-29T18:42:15Z
2019-08-30T10:34:59Z
2019-08-29T19:28:55Z
MEMBER
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28,224
TYPING: add index and columns attributes to DataFrame
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2019-08-29T19:54:52Z
2019-08-30T15:26:04Z
2019-08-30T15:26:04Z
MEMBER
null
diff for `mypy pandas --disallow-any-expr` ``` 2887,2888d2886 < pandas\io\formats\format.py:626: error: Expression has type "Any" < pandas\io\formats\format.py:651: error: Expression has type "Any" 2907,2909d2904 < pandas\io\formats\format.py:786: error: Expression has type "Any" < pandas\io\formats\format.py:...
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28,225
PERF: data = np.nan to speed up empty dataframe creation
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2019-08-29T20:57:08Z
2019-09-02T21:34:28Z
2019-09-02T21:34:28Z
NONE
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- [x] closes #28188 - Short summary If we have enough information to know the shape of the final dataframe, we set the value of data to np.nan if not set. - Longer explanation If I understand correctly the `__init__` of DataFrame, with this change when the first if evaluates True then all following ifs eval...
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487,196,267
MDExOlB1bGxSZXF1ZXN0MzEyNTExMDU0
28,226
Don't fail when plotting Series/DataFrame with no row
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2019-08-29T22:03:24Z
2020-04-29T23:16:03Z
2019-09-11T19:26:20Z
CONTRIBUTOR
null
When Series or DataFrames was empty (no cells) after removing columns without a suitable type (.select_dtypes), pandas was throwing a "no numeric data to plot" exception. This can happen: 1) either because there is no column with a suitable type; 2) or if there is no row. Raising an exception in the first...
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28,227
PERF: trim import time ~5%
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2019-08-29T23:16:02Z
2019-09-05T16:02:56Z
2019-09-05T15:52:22Z
MEMBER
null
by avoiding/lazifying expensive stdlib imports. Exact timings are tough because repeated runs of `python3 -X importtime -c "import pandas as pd"` are really high variance, but my general read is that this trims about 35 ms out of about 650 ms.
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28,228
PERF: lazify pytz seqToRE call, trims 35ms from import
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2019-08-29T23:35:37Z
2019-08-30T17:10:07Z
2019-08-30T16:38:40Z
MEMBER
null
Shaves on the order of 5% off of import time. Unrelated docstring fixups, improve typing on parse_timezone_directive and _calc_julian_from_V. The important thing here is setting the "Z" key dynamically in `__getitem__` instead of in `__init__` (since an instance is created in the module namespace at importt)
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28,229
REGR: Fix to_csv with IntervalIndex
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2019-08-30T00:25:14Z
2019-08-30T17:15:32Z
2019-08-30T14:32:28Z
MEMBER
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- [X] closes #28210 - [X] tests added / passed - [X] passes `black pandas` - [X] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [X] whatsnew entry
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28,230
Improved benchmark coverage for reading spreadsheets
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2019-08-30T10:40:51Z
2019-09-05T17:11:04Z
2019-09-05T17:10:54Z
CONTRIBUTOR
null
- [x] closes #27485 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` AFAIK there's no writer for OpenDocument spreadsheet, so I came up with the minimal amount of code to generate the spreadsheet `odf` engine can read.
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28,231
Update documentation on pd.read_excel, to reflect the fact that support for OpenDocument files is available
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2019-08-30T12:51:23Z
2019-09-05T18:03:57Z
2019-09-05T18:03:57Z
NONE
null
```python class ExcelFile: """ Class for parsing tabular excel sheets into DataFrame objects. Uses xlrd. See read_excel for more documentation Parameters ---------- io : string, path object (pathlib.Path or py._path.local.LocalPath), file-like object or xlrd workbook I...
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28,232
Backport PR #28229 on branch 0.25.x (REGR: Fix to_csv with IntervalIndex)
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2019-08-30T14:32:57Z
2019-08-30T16:55:06Z
2019-08-30T16:55:06Z
NONE
null
Backport PR #28229: REGR: Fix to_csv with IntervalIndex
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Backport PR #28216 on branch 0.25.x (REGR: <th> tags for notebook display closes #28204)
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Backport PR #28216: REGR: <th> tags for notebook display closes #28204
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28,234
.to_csv in jupyter notebook giving "unexpected keyword argument 'tupleize_cols' " error
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9
2019-08-30T17:27:45Z
2019-09-02T09:57:38Z
2019-08-30T17:33:53Z
NONE
null
#### Code Sample ``` # df.to_csv('output_file.csv') ``` #### Problem description In Jupyter notebook, the to_csv method does not work anymore since I upgraded pandas to version 0.25.1 It gives the following error message: > TypeError: __init__() got an unexpected keyword argument 'tupleize_cols' #### Outp...
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28,235
pandas._lib.testing.assert_almost_equal seem to not use approximate equality for Series with complex doubles
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2019-08-30T19:14:39Z
2020-10-01T17:52:14Z
2020-10-01T17:52:14Z
NONE
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#### Code Sample, a copy-pastable example if possible ```python import numpy as np import pandas as pd from pandas.util.testing import assert_almost_equal e1 = np.array([0.5831076580182805, -0.9083518696779991], 'd') e2 = np.array([0.5831076580182805, -0.9083518696779992], 'd') e1z = np.asanyarray(e1, np...
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28,236
seed isort known_third_party pre-commit hook
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2019-08-30T19:42:38Z
2019-09-04T11:26:12Z
2019-09-04T11:26:12Z
CONTRIBUTOR
null
@basnijholt question on this. When making changes in https://github.com/pandas-dev/pandas/pull/28164, seed_isort_known_third_party wants to make the following changes. ``` diff --git a/setup.cfg b/setup.cfg index 43dbac15f5..227defcfe8 100644 --- a/setup.cfg +++ b/setup.cfg @@ -116,7 +116,7 @@ known_dtypes = pa...
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28,237
fix DatetimeIndex.tz_localize examples docstring
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2019-08-30T19:56:23Z
2019-08-30T21:04:20Z
2019-08-30T20:54:02Z
CONTRIBUTOR
null
[DatetimeIndex.tz_localize](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DatetimeIndex.tz_localize.html#pandas.DatetimeIndex.tz_localize) doc string has improperly formatted examples near the bottom. Trivial fix, so didn't think it needed an issue or whatsnew entry, but happy to add if needed. Now ...
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28,238
pd.to_datetime() fails for KeyError when raising monotonic increasing index ValueError
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2019-08-30T22:24:55Z
2021-07-25T14:07:02Z
2021-07-25T14:07:02Z
NONE
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd import numpy as np from datetime import datetime times = pd.date_range(datetime.now(), periods=1000, freq='h') times = times.to_frame(index=False, name='DT').sample(1000) times.index = times.index.to_series().astype(float)/10...
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28,239
PERF: asv for import
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2019-08-31T01:15:12Z
2019-09-05T15:45:44Z
2019-09-05T15:34:44Z
MEMBER
null
- [x] closes #26663 for py37 this uses `-X importtime` to get a more precise number without subprocess overhead. Doesn't actually do anything with it, but what the heck. Couple of unrelated cleanups.
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28,240
Missing <th> for index in notebook display of pd.DataFrame in 0.25.1
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2019-08-31T09:30:32Z
2019-08-31T10:48:58Z
2019-08-31T10:48:41Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ![screen](https://user-images.githubusercontent.com/6342379/64061988-c6820280-cbe1-11e9-8ae7-7bedd4828489.png) #### Problem description Since `0.25.1`, the row index ("A" and "B" in [2]) is not shown in boldface any more. #### Expected Output Same as ...
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28,241
Datetime mergeasof tolerance
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2019-08-31T13:51:23Z
2021-06-27T18:50:43Z
2019-09-25T15:50:32Z
CONTRIBUTOR
null
- [x] closes #28098 - [x] tests 1 / 1 - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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28,242
to_record fails on aggregate DataFrame
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2019-08-31T14:17:52Z
2019-08-31T15:36:17Z
2019-08-31T15:36:17Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python # Your code here import pandas as pd import numpy as np df = pd.DataFrame([{ 'uid': '1345a', 'category': 'Automobile', 'amount': 40050.12 }, { 'uid': 'b7345', 'category': 'Hovercraft', 'amount':279215.00 }, { '...
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28,243
BUG: Left join on index and column gives incorrect output
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3
2019-08-31T16:14:16Z
2020-05-29T21:45:31Z
null
MEMBER
null
```python import numpy as np import pandas as pd df_left = pd.DataFrame(index=["a", "b"]) df_right = pd.DataFrame({"x": ["a", "c"]}) pd.merge(df_left, df_right, left_index=True, right_on="x", how="left") # x # 0.0 a # NaN b ``` #### Problem description This is closely related to https://github.c...
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28,244
data frame rolling std return wrong result with large elements
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2019-08-31T16:53:21Z
2020-09-18T21:59:52Z
2020-09-18T21:59:24Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python arr = [9.54e+08, 6.225e-01, np.nan, 0, 1.14, 0] arr = pd.DataFrame(arr) print(arr.rolling(5,3).std()) ###output 0 0 NaN 1 NaN 2 NaN 3 5.507922e+08 4 4.770000e+08 5 0.000000e+00 #### Problem desc...
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28,245
DOC: fix read_excel and ExcelFile engine parameter description (#28231)
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2019-08-31T21:57:19Z
2019-09-05T18:04:03Z
2019-09-05T18:03:57Z
CONTRIBUTOR
null
Closes #28231. First PR. Not sure if I'm doing anything wrong.
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28,246
.transform inconsistent / error-prone behavior for list
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2019-09-01T08:51:57Z
2020-09-22T01:33:43Z
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NONE
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd df = pd.DataFrame(data={'label': ['a', 'b', 'b', 'c'], 'wave': [1, 2, 3, 4], 'y': [0,0,0,0]}) ###problem 1 df['n_tuple'] = df.groupby(['label'])[['wave']].transform(tuple) df['n_set'] = df.groupby(['label'])[['wave']].transf...
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28,247
[Bug][Regression] df.groupby.apply fails under specific conditions
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2019-09-01T12:06:20Z
2019-10-03T17:25:04Z
2019-10-03T17:25:04Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd import datetime def get_vals(x): return pd.Series([0,1,2], index=[2000, 2001, 2002]) b = list(range(0,3))*2 y = list(range(2000,2003))*2 df = pd.DataFrame({'b':b,'y':y}) df['date'] = pd.to_datetime(df['y'].apply(lamb...
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28,248
BUG: pivot_table not returning correct type when margin=True and aggfunc='mean'
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2019-09-01T17:11:13Z
2019-11-23T22:44:03Z
2019-11-23T22:43:53Z
CONTRIBUTOR
null
- [x] closes #24893 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` # What's new Use of `maybe_downcast_to_dtype` in `_add_margins` so it can resolve the dtype conversion, avoiding floats being converted to integers when the result of th...
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28,249
Misbehavior for Dataframe updates on unexisting DateTime index
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2019-09-02T09:10:58Z
2021-07-11T17:22:16Z
null
NONE
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#### Code Sample, a copy-pastable example if possible ``` import pandas as pd import datetime as dt df = pd.DataFrame({'Date': ['2017-01-02', '2017-01-03','2017-01-04'], 'T': [10, 11,12], 'RM': [28, 29,30]}) df['Date'] = pd.to_datetime(df.Date,infer_datetime_format=Tru...
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28,250
Add support for reading Stata .dta file format 119
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2019-09-02T12:33:59Z
2019-09-20T12:40:12Z
2019-09-20T12:40:12Z
CONTRIBUTOR
null
Please add functionality to read format 119 `.dta` Stata files! See file format here: https://www.stata.com/help.cgi?dta#versions Currently, even though Pandas can _write_ format 119 files (https://github.com/pandas-dev/pandas/blob/612d3b23da5b99f6c5642be574fb08713a45d7d1/pandas/io/stata.py#L2663), it seems unable t...
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488,226,597
MDExOlB1bGxSZXF1ZXN0MzEzMjk0OTk2
28,251
BUG: Fix numpy boolean subtraction error in Series.diff
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24
2019-09-02T14:49:53Z
2019-10-01T21:06:20Z
2019-10-01T16:38:46Z
CONTRIBUTOR
null
A new version of the pull request (#27755), the other one was a bit behind. Original text below. This fixes #17294, for more than three years now NumPy has not allowed the subtraction of boolean series. TypeError Traceback (most recent call last) <ipython-input-46-3da3b949c6bd> i...
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28,252
Parquet file written with fastparquet backend cannot be read with pyarrow backend
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2019-09-02T15:52:59Z
2019-09-09T13:56:28Z
2019-09-09T13:56:20Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python In [63]: pd.DataFrame({'foo': [datetime(2019, 10, 1)], 'bar': ['test']}).to_parquet('/tmp/minimal.parquet', engine='fastparquet') In [64]: pd.read_parquet('/tmp/minim...
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28,253
Fix PR06 errors in docstrings ('Parameter "{param_name}" type should use "{right_type}" instead of "{wrong_type}"')
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7
2019-09-02T16:11:02Z
2021-11-20T05:51:53Z
2021-11-20T05:51:53Z
CONTRIBUTOR
null
[link to original issue](https://github.com/pandas-dev/pandas/issues/27977 (27977)) The output of `python scripts/validate_docstrings.py --errors=PR06` returns 257 instances of 'Parameter "{param_name}" type should use "{right_type}" instead of "{wrong_type}' Given the large number of cases, it probably makes sen...
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28,254
ENH: .pipe to subset of columns
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4
2019-09-02T16:18:53Z
2021-07-11T17:24:38Z
2021-07-11T17:24:38Z
NONE
null
#### Feature Request I often find myself writing code like the following to create a pipeline: ```python # specific function def astype_int(df, cols): """Convert columns to integer.""" df = df.copy() df[cols] = df[cols].astype('int') return df # more general def myfun(df, cols): """...
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28,255
BENCH: Add peakmem benchmarks for rolling
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2019-09-02T19:31:29Z
2019-09-03T05:04:49Z
2019-09-03T05:04:46Z
MEMBER
null
``` $ asv dev -b rolling [ 20.00%] ··· rolling.Methods.peakmem_rolling ok [ 20.00%] ··· ============ ======== ======= ======== ======= ======= ======= ======= ...
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488,317,421
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28,256
Timedelta in to_json object array and ISO dates not handled properly
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2019-09-02T21:04:56Z
2020-03-19T00:57:22Z
2020-03-19T00:57:22Z
MEMBER
null
Intertwined with #15137 though a slight different issue. `date_format="iso"` has different behavior for Timedeltas depending on whether or not the Timedelta is in a DTA or an object array. To illustrate: ```python # Wrong format ref 15137, but at least tries to do some formatting >>> pd.DataFrame([[pd.Timedelta...
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28,257
BUG: CategoricalIndex allowed reindexing duplicate sources
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2019-09-02T22:12:25Z
2019-10-16T12:52:58Z
2019-10-16T12:52:55Z
CONTRIBUTOR
null
For consistency with normal indexes, `CategoricalIndex.reindex` should allow targets to be duplicated but not the sources. However, currently in allows the source to be duplicated but not the targets, which is exactly the wrong behaviour. Most of the work here is fixing the tests, which in many cases explicitly chec...
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28,258
Revert #27959
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2
2019-09-02T23:31:09Z
2019-09-03T01:31:07Z
2019-09-03T00:07:27Z
MEMBER
null
On Sparse tests it is causing recursion errors. Revert and I'll revisit
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28,259
Fix to_json Memory Tests
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2019-09-03T00:04:39Z
2020-01-16T00:35:11Z
2019-09-04T11:56:26Z
MEMBER
null
Inspired by @mroeschke I noticed the JSON tests weren't actually measuring anything because you need to return something for the `mem_` tests which these weren't. In any case probably better served as `peakmem_`
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28,260
re-implement #27959
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2019-09-03T01:39:37Z
2019-09-03T19:04:23Z
2019-09-03T18:53:53Z
MEMBER
null
Previous version broke because a different branch changed the behavior of when extract_array is called.
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28,261
TypeError: can only concatenate list (not "int") to list
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2019-09-03T06:51:14Z
2021-07-11T17:25:42Z
null
NONE
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd a = pd.Series([[12]]) b = a + [222] ``` #### Problem description 1. in pandas version 0.24, the code went well 2. in pandas version 0.25.1, the code raise TypeError can only concatenate list (not "int") to list ```shell ~\Ap...
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28,262
Non-silently handle duplicate column names
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2019-09-03T08:14:12Z
2019-09-03T11:33:37Z
2019-09-03T11:33:37Z
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#### Code Sample, a copy-pastable example if possible ```python >>> df = pd.DataFrame([[1, 2, 3]], columns=["x", "y", "x"]) >>> df['x'] x x 0 1 3 >>> df.loc[:, 'x'] x x 0 1 3 >>> df['x'].between(1,2) Traceback (most recent call last): File "<stdin>", line 1, in <module> File "[...]/python3...
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28,263
pandas.read_parquet cause OOM in a 16GB machine, it's a 200MB parquet file, 6M rows.
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2019-09-03T09:41:57Z
2019-09-03T15:44:18Z
2019-09-03T15:28:28Z
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd # query from db datalist = ... # 6M rows, 4 fields(string string string datetime) every row. df = pd.from_dict(datalist) df.to_parquet("test.pq") df = pd.read_parquet("test.pq") # OOM ``` #### Problem description > d...
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28,264
Contribute to issue #15580
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2019-09-03T12:29:47Z
2019-09-05T15:34:03Z
2019-09-05T15:34:03Z
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- [ ] closes #15580 - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry I'm new at contributing on Pandas and any project at all, and saw this generic "fix docs" issue. I made some very small changes that i think it help...
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MDExOlB1bGxSZXF1ZXN0MzEzNTgwNzU2
28,265
BUG: pd.to_datetime fixed (#28238)
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2019-09-03T12:59:35Z
2019-09-07T17:48:56Z
2019-09-07T17:48:56Z
NONE
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- [ ] closes #28238 - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Fix for KeyError when trying to convert a series with unsorted float index to a DateTime @AntonioAndraues @Vinigl
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28,266
set timeoffset as the window parameter doesn't work for rolling corr function
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2019-09-03T14:30:54Z
2020-10-26T03:18:18Z
2020-10-26T03:18:18Z
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd df = pd.DataFrame({'B': [0, 1, 2, 4,3],'A':[7,4,6,9,3]}, index = [pd.Timestamp('20130101 09:00:00'), pd.Timestamp('20130102 09:00:02'), pd.Timestamp('201...
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28,267
BUG: Make sure correct values are passed to Rolling._on when axis=1
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2019-09-03T17:24:19Z
2019-09-04T17:10:19Z
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- [x] closes #28192 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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28,268
BUG: Timestamp+int should raise NullFrequencyError, not ValueError
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2019-09-03T17:53:21Z
2019-09-08T17:12:39Z
2019-09-08T17:09:55Z
MEMBER
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Last prerequisite before we can fix #28080.
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28,269
Casting bool to object during join
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2019-09-03T17:56:06Z
2021-07-11T17:26:21Z
null
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```python import pandas as pd core_df = pd.DataFrame([ {'id': 1}, {'id': 2}, ]).set_index('id') df1 = pd.DataFrame([ {'id': 1, 'foo': True}, {'id': 2, 'foo': False}, ]).set_index('id') df2 = pd.DataFrame([ {'id': 1, 'bar': 3}, {'id': 2, 'bar': 4}, {'id': 3, 'bar': 4}, # A...
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28,270
Issue with pandas delimiter
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2019-09-03T18:32:20Z
2019-11-03T00:48:56Z
2019-11-03T00:48:55Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python from census import Census import pandas as pd from sqlalchemy import create_engine import csv import sys filename = 'C:/Users/APIlist2.csv' with open(filename) as f: reader = csv.reader(f) try: for row in reader: ...
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488,772,339
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28,271
to_numeric(errors='ignore') doesn't work with leading zeros
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2019-09-03T19:05:44Z
2019-09-26T19:49:32Z
2019-09-26T19:49:32Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python s = pd.Series([1, 1.0, '1', '1.0', ' 1', ' 1.0', '01', '01.0']) pd.to_numeric(s, errors='ignore') # returns [1, 1, 1, 1.0, 1, 1.0, '01', '01.0'] # but expected [1, 1, 1, 1.0, 1, 1.0, 1, 1.0] ``` #### Problem description The `to_numeric` functio...
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488,776,912
MDExOlB1bGxSZXF1ZXN0MzEzNzI5MDA3
28,272
DEV: remove seed isort config
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2
2019-09-03T19:16:44Z
2019-09-04T11:26:12Z
2019-09-04T11:26:12Z
CONTRIBUTOR
null
This was causing issues for me locally. Anyone else? It took a while to run, and didn't seem to give the same output as others (depends on something peculiar to my environment) which doesn't seem to be great for a pre-commit hook. Closes https://github.com/pandas-dev/pandas/issues/28236
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28,273
Address Untested to_json Extension Module Code
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2019-09-03T21:43:23Z
2020-05-08T21:13:14Z
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MEMBER
null
There's an old TODO note about untested code in the extension module hanging around in objToJSON.c: https://github.com/pandas-dev/pandas/blob/bfff080275b4456b28d71f0c7b4ec9e678d4270c/pandas/_libs/src/ujson/python/objToJSON.c#L504 Interestingly enough, this is actually tested by the `np.datetime64` parameter in `t...
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28,274
NDFrame.sum ignores min_count for object dtype
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2019-09-03T23:52:37Z
2021-07-11T17:31:00Z
2021-07-11T17:31:00Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python >>> index = pd.MultiIndex.from_product([['a'], ['foo', 'bar']]) >>> s = pd.Series([np.nan] * 2, index=index) >>> s.astype('O').sum(level=1, min_count=1) foo 0 bar 0 dtype: int64 ``` #### Problem description Using sum with a multiindex...
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28,275
BUG: passing DataFrame to make_block silently raises
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2019-09-04T00:09:06Z
2020-04-05T17:35:48Z
2019-09-16T21:04:22Z
MEMBER
null
ATM in the `except NotImplementedError:` branch of `_cython_agg_blocks`, we take a difference approach to the operation. if that approach succeeds, we end up passing a DataFrame to `make_block` on L189, which will raise `ValueError`. As a result, we'll end up falling back to python-space for the entire operation, whi...
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28,276
CLN: catch Exception in fewer places, assorted cleanups
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2019-09-04T02:51:26Z
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28,277
`series.str.cat(series.str)` is concatenating only the largest string
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2019-09-04T05:11:59Z
2021-07-11T17:32:09Z
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd arr = ["AbC", "de", "FGHI", "j", "kLLLm"] ps = pd.Series(arr) expect = ps.str.cat(others=ps.str) print(expect) Out[16]: 0 NaN 1 NaN 2 NaN 3 NaN 4 kLLLmkLLLm dtype: object ``...
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pivot_table(..., values='a') and pivot_talbe(...)['a'] yield different output
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2019-09-04T06:21:27Z
2019-11-03T00:49:47Z
2019-11-03T00:49:46Z
NONE
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#### Code Sample ```python aaa = pd.pivot_table(data=human, index='patient_ID', columns='Hugo_Symbol', fill_value=0, values='RNA.alt.fra') bbb = pd.pivot_table(data=human, index='patient_ID', columns='Hugo_Symbol', fill_value=0)['RNA.alt.fra'] print(aaa.shape) >>> (39, 4553) print(bbb.shape) >>> (39, 4556) ...
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28,279
Series.loc[list] with uint64 keys returns a dataframe with Float64Index
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2019-09-04T06:27:51Z
2019-11-27T20:47:44Z
2019-11-27T20:47:44Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python bug = pd.Series([0, 1, 2, 3, 4], index=[7606741985629028552, 17876870360202815256, 13106359306506049338, 8991270399732411471, 8991270399732411472]) assert bug.loc[7606741985629028552]==0 assert bug.loc[17876870360202815256]==1 bug.loc[[76067419856...
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Documentation DataFrame.plot() not available
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2019-09-04T10:11:58Z
2019-09-04T10:55:22Z
2019-09-04T10:55:22Z
NONE
null
#### Problem description In the current stable pandas documentation both [DataFrame.plot()](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.plot.html#pandas.DataFrame.plot) and [Series.plot()](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.Series.plot.html?highlight=plo...
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28,281
DOC: Fix typo in min_rows / max_rows option example
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2019-09-04T11:25:42Z
2019-09-05T07:49:56Z
2019-09-04T16:13:12Z
CONTRIBUTOR
null
- Fix typo in example - Regenerated output also seems to fix a bad output in the next line (out 32 in current online documentation) where df is truncated, when it shouldn't by according to the code
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28,282
DataFrame.itertuples() incorrectly determines when plain tuples should be used
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1
2019-09-04T11:43:15Z
2020-01-02T00:58:16Z
2020-01-02T00:58:16Z
NONE
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#### Code Sample, a copy-pastable example if possible ```python >>> import pandas, sys >>> sys.version '3.6.7 (default, Oct 25 2018, 09:16:13) \n[GCC 5.4.0 20160609]' >>> pandas.__version__ '0.25.1' >>> df = pandas.DataFrame([{f"foo_{i}": f"bar_{i}" for i in range(255)}]) >>> df.itertuples(index=False) ... ...
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28,283
Various methods don't call call __finalize__
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34
2019-09-04T12:10:47Z
2021-10-23T21:46:31Z
null
CONTRIBUTOR
null
Improve coverage of NDFrame.__finalize__ Pandas uses `NDFrame.__finalize__` to propagate metadata from one NDFrame to another. This ensures that things like `self.attrs` and `self.flags` are not lost. In general we would like that any operation that accepts one or more NDFrames and returns an NDFrame should propa...
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28,284
Index.drop - add inplace option
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2019-09-04T14:43:56Z
2019-09-04T15:13:04Z
2019-09-04T15:13:04Z
NONE
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I have a Pandas.Index object which i want to delete some of the indices stored in it. Since currently inplace=True is not available, i am forced to declare a new variable to hold the result which seems cumbersome. currently i need to write: #drop all columns with only 1 unique value. nunique=df.apply(pd.Series.nu...
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Dataframe Groupby with Quantile Can't handle q=tuple
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2019-09-04T15:19:57Z
2019-09-04T19:06:58Z
2019-09-04T19:06:57Z
NONE
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In version 0.24.1, a groupby with `quantile(q)`, where `q` is a tuple works. However, with 0.25, a `TypeErr` exception is thrown. This works as expected: `pd.DataFrame([[0,1,2,3],[0,4,5,6],[1,7,8,9],[1,10,11,12]],columns=['a','b','c','d']).quantile((0.01,0.99))` but this does not: `pd.DataFrame([[0,1,2,3],[0,4...
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BUG: datetime64 - Timestamp incorrectly raising TypeError
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2019-09-04T16:51:55Z
2019-09-07T19:26:36Z
2019-09-07T19:21:09Z
MEMBER
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- [ ] closes #xxxx - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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28,287
DataFrame.dropna() not working with sparse columns
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2019-09-04T19:50:41Z
2020-06-20T13:46:25Z
2020-06-20T13:35:18Z
NONE
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```python import numpy as np import pandas as pd A = pd.DataFrame({'a': [0,1], 'b': pd.SparseArray([np.nan, 1])}) # Prints empty DataFrame A.dropna() ``` Not sure if I'm using this correctly, but I'd expect only the first row to be dropped. #### Output of ``pd.show_versions()`` <details> INSTALLED...
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DOC: Fix PR06 errors in Series docstrings (#28253)
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2019-09-04T21:33:19Z
2019-09-16T02:39:38Z
2019-09-16T02:39:31Z
CONTRIBUTOR
null
First bit of work on #28253, fixes PR06 validation errors in Series docstrings. Mostly just converting boolean -> bool, string -> str, integer -> ; re-worded a little where necessary. - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` Ran validate_docstrings.py and ...
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BUG: Series[timdelta64].var() should _not_ work
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2019-09-04T22:41:18Z
2019-11-02T15:37:48Z
2019-11-02T15:23:47Z
MEMBER
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- [x] closes #18880 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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MDExOlB1bGxSZXF1ZXN0MzE0MzE1OTg5
28,290
Fix inconsistent casting to bool
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5
2019-09-05T04:02:35Z
2019-09-05T18:16:25Z
2019-09-05T18:14:17Z
MEMBER
null
Series logical ops (`|`, `&`, `^`) have a bunch of inconsistencies. This partially addresses one of them, and does so in a way that makes the diff for the next one much more manageable than it would be without this.
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28,291
[FR] add option to format \hline in to_latex()
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1
2019-09-05T05:01:15Z
2021-05-24T13:44:05Z
2021-05-24T13:44:05Z
NONE
null
Please considering add a parameter to allow users to add `\hline` to the latex output so that each two rows will have a horizontal line between them. For example: ```python import pandas as pd df = pd.DataFrame(data={'col_1': [1, 2, 4], 'col_2': [4, 3, 2]}) print(df.to_latex(index=Fals...
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28,292
df.style.highlight_max() crashes if DataFrame is empty, but has some metadata
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2019-09-05T07:23:02Z
2019-09-13T18:32:17Z
2019-09-13T18:32:17Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python print(df.columns) Index([], dtype='object', name='MONTH') df.style.highlight_max(axis=1).format("{:.0f}") ``` #### Problem description Pandas crashes with the trace shown below, when styler applied to an empty dataframe, which contains some meta...
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28,293
Different behavior of read_csv on Windows with Anaconda and Ubuntu 18
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3
2019-09-05T11:14:01Z
2020-01-16T22:38:33Z
2020-01-16T22:38:32Z
NONE
null
Hello, I'm experiencing different behavior of the following script: https://stackoverflow.com/questions/57791115/forecast-produced-by-gluon-ts-example-is-around-0 on Windows with Anaconda and on Ubuntu 18. It works as expected on Windows, but doesn't on Ubuntu 18 (produces plot around 0) This seems to have s...
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28,294
Clarify that MultiIndex.set_levels() interprets passed values as new components of the .levels attribute
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2019-09-05T11:47:59Z
2021-09-05T21:55:14Z
2020-01-03T13:12:59Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python import numpy as np import pandas as pd df = pd.DataFrame(np.random.rand(3, 3), columns=pd.MultiIndex.from_tuples([(1, 2), (1, 4), (5, 6)])) df.columns = df.columns.set_levels([1, 1, 3], level=0) ``` Which raises a ```ValueError```: ```python V...
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28,295
MultiIndex.set_levels() unexpected behaviour
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2019-09-05T11:53:34Z
2019-09-05T16:45:07Z
2019-09-05T16:45:07Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python import numpy as np import pandas as pd df = pd.DataFrame(np.random.rand(3, 3), columns=pd.MultiIndex.from_tuples([(1, 2), (1, 4), (5, 6)])) df.columns = df.columns.set_levels([1, 2, 3], level=0) ``` Output: ```python 1 ...
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28,296
BUG: Merge on CategoricalIndex fails if left_index=True & right_index=True, but not if on={index} #28189
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2019-09-05T14:01:21Z
2019-12-17T17:42:55Z
2019-12-17T17:42:54Z
NONE
null
- [x] closes #28189 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry This modification resolves the error in issue #28189 but still not working as expected. It seems that there is a bug related with left-join, as you...
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28,297
fix Rolling for multi-index and reversed index.
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2019-09-05T14:26:07Z
2020-03-01T16:01:26Z
2019-10-22T01:35:37Z
CONTRIBUTOR
null
Fix Rolling operation for level of multi-index and descending time index (that is monotonic, but decreasing). - [x] closes #19248 - [x] closes #15584 - [x] tests passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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MDU6SXNzdWU0ODk4NzM4MzA=
28,298
Modify get_group() method to allow getting multiple groups
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8
2019-09-05T16:34:00Z
2021-08-30T05:43:12Z
2021-07-11T17:37:10Z
NONE
null
#### Problem description The `get_group()` method supports getting **one group** from a grouped object by ```python # Current syntax grouped.get_group('name1') ``` but you can't get **multiple groups** simply by ```python # Desired syntax grouped.get_group(['name1', 'name2']) ``` This causes *"ValueError...
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MDU6SXNzdWU0ODk4OTYyNjI=
28,299
to_datetime(foo, errors='coerce') does not swallow all errors
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2019-09-05T17:16:42Z
2019-09-12T12:45:21Z
2019-09-12T12:45:21Z
CONTRIBUTOR
null
#### Code Sample ```python # this fails with ValueError in 0.25.1: pandas.to_datetime('200622-12-31', errors='coerce') # but returns Timestamp('2022-06-21 19:00:00') in pandas 0.23.4 # this also fails: pandas.to_datetime('111111-24-11', errors='coerce') # but this does not: pandas.to_datetime('111111-23-...
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28,300
BUG: make tz_localize operate on values rather than categories
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2019-09-05T17:28:44Z
2019-11-12T11:25:23Z
2019-11-02T20:19:35Z
MEMBER
null
- [x] closes #27952 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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28,301
groupby level after stack not actually grouping
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2019-09-05T18:01:51Z
2019-09-10T12:05:08Z
2019-09-10T12:05:08Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python columns = pd.MultiIndex.from_product([['a', 'b'], [1, 2]]) index = [0, 0, 1, 1] values = np.arange(16).reshape(-1, 4) df = pd.DataFrame(values, columns=columns, index=index) a b 1 2 1 2 0 0 1 2 3 0 4 5 6 7...
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28,302
groupby(pd.Grouper) ignores loffset
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2019-09-05T18:15:35Z
2020-05-26T05:19:03Z
2020-05-10T15:52:55Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd df = pd.date_range(start="1/1/2018", end="1/2/2018", periods=1000).to_frame() print(df.resample("1h", loffset="15min").last().index) print(df.groupby(pd.Grouper(freq="1h", loffset="15min")).last().index) ``` #### Problem descri...
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28,303
Extreme performance difference between int and float factorization
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2019-09-05T18:43:23Z
2020-11-14T16:15:26Z
2020-11-14T16:15:26Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd import numpy as np from time import time df = pd.date_range(start="1/1/2018", end="1/2/2018", periods=1e6).to_frame() start = time() dfr = df.resample("1s").last() print(time() - start) print("Length:", len(dfr)) print...
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Added a way to check if a numeric type cell is NaN
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2019-09-05T21:32:05Z
2019-09-11T01:20:23Z
2019-09-11T01:20:23Z
NONE
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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28,305
Pandas df.rolling.mean() abnormal behavior for a Series having larger numbers (in the scale of billions)
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2019-09-05T21:39:19Z
2020-04-01T14:02:05Z
2020-04-01T14:02:05Z
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#### Code Sample, a copy-pastable example if possible ```python #Sample residual pcts residuals_pct =[0.044516001,0.031137117,1.06758E+64,0.003522454,0.065171486,0.06033751,0.01325514,-0.005620799,-0.006225719,0.045713825,0.039280786,0.000531307] #Creating a dataframe with residual percent d = pd.DataFrame(res...
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28,306
Pandas unstack() unexpected behavior with multiindex row and column
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2019-09-05T22:43:48Z
2020-03-26T20:08:08Z
2020-03-26T20:08:08Z
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#### Code Sample, a copy-pastable example if possible ```python data = { ('effect_size', 'cohen_d', 'mean'): { ('m1', 'P3', '222'): 0.52, ('m1', 'A5', '111'): -0.07, ('m2', 'P3', '222'): -0.53, ('m2', 'A5', '111'): 0.05, }, ('wilcoxon', 'z_score', 'stouffer'): { ...
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28,307
groupby/quantile breaks
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2019-09-05T23:05:58Z
2019-09-06T16:29:58Z
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NONE
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#### Code Sample, a copy-pastable example if possible ```python In [34]: pd.DataFrame({'x': [0, 1, 2], 'y': [0, 1, 2]}).groupby('x')['y'].quantile([0.5]) ---------------------------------------...
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28,308
Integers coerced to float when getting rows from all-numeric data frames
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2019-09-05T23:26:42Z
2019-09-07T20:10:03Z
2019-09-07T20:09:55Z
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When selecting a row in a data frame that only contains numeric values, pandas coerces any integer values to floats. I assume this keeps the underlying data structure more contiguous and improves performance, but it's not really semantically correct, because floats can't do everything that integers can. For example, ...
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CLN: catch Exception less
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28,310
CLN: catch specific Exceptions in _config
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28,311
concat and append ignore level names and order in multi-level index DataFrames
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3
2019-09-06T08:37:14Z
2021-07-11T17:38:20Z
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#### Code Sample ```python >>> tmp = pd.DataFrame( { 't': [0,0], 'h': [1,2], 'k': [3,4] } ) >>> tmp t h k 0 0 1 3 1 0 2 4 >>> tmp2 = tmp.set_index( ['h','k'] ) >>> tmp2 t h k 1 3 0 2 4 0 >>> tmp3 = tmp.set_index( ['k','h'] ) # swap levels >>> tmp3 t k h 3 1 0 4 2 0 >>> tmp2.a...
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28,312
GroupBySeries Quantile fails when there are 3 or more categories
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2019-09-06T09:59:21Z
2019-09-06T16:00:15Z
2019-09-06T16:00:09Z
NONE
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#### Code Sample Using the latest version of pandas v0.25.1 ```python import numpy as np import pandas as pd np.random.seed(12345) df1 = pd.DataFrame({ 'category': ['A', 'A', 'A', 'A', 'B', 'B', 'B', 'B', ], 'value': np.random.randint(1, 10, 8) }) df1.gr...
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