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https://api.github.com/repos/pandas-dev/pandas/issues/26713
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Performance for TimedeltaArray.__iter__ and PeriodArray.__iter__
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1
2019-06-07T19:34:28Z
2020-10-14T18:19:25Z
2020-10-14T18:19:25Z
CONTRIBUTOR
null
Right now `DatetimeArray.__iter__` does it's boxing in chunks. We could do something similar for TimedeltaArray and possibly PeriodArray.
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CI: matplotlib failures
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2019-06-07T20:25:02Z
2019-06-08T04:22:44Z
2019-06-08T04:22:44Z
CONTRIBUTOR
null
https://travis-ci.org/pandas-dev/pandas/jobs/542921706#L2423 ``` =================================== FAILURES =================================== _______________________ TestDataFramePlots.test_subplots _______________________ [gw1] linux -- Python 3.6.8 /home/travis/miniconda3/envs/pandas-dev/bin/python self = ...
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26,715
TST: skip assert for mpl 3.1+
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2019-06-07T20:36:34Z
2019-06-08T04:22:48Z
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CONTRIBUTOR
null
Closes #26714 xref https://github.com/pandas-dev/pandas/issues/26716
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CI: Restore pyarrow for travis-3.6
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2019-06-07T20:40:10Z
2019-12-04T13:10:24Z
2019-12-04T13:10:24Z
CONTRIBUTOR
null
Present in the last two builds on master - https://travis-ci.org/pandas-dev/pandas/jobs/542915088 - https://travis-ci.org/pandas-dev/pandas/jobs/542931830 ``` gw0 I /home/travis/miniconda3/envs/pandas-dev/lib/python3.6/site-packages/hypothesis/_settings.py:193: HypothesisDeprecationWarning: The timeout setting...
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BUG: Check for duplicate names columns and index in crosstab
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2019-06-07T20:45:19Z
2019-09-17T02:11:42Z
2019-08-28T16:14:39Z
NONE
null
- [ ] closes #22529 - [x] tests added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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WIP: debug CI
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2019-06-07T21:21:50Z
2019-06-07T21:33:39Z
2019-06-07T21:33:35Z
CONTRIBUTOR
null
closes #26716
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26,719
Pandas Bar Plot xlim failure
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2019-06-07T21:44:50Z
2019-08-21T16:32:26Z
2019-08-21T16:32:25Z
NONE
null
#### Code Sample ```python df['Quarter'] = pd.PeriodIndex(df['date'], freq='Q') fig, ax = plt.subplots(figsize=(10,5)) df.plot.bar(x='Quarter', y ='ape', ax=ax, xlim=('2015Q1', '2019Q1'), color="tab:green").grid(alpha=.4) ``` #### Problem description for bar plot, xlim option fails and always gives the same ...
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26,720
SettingWithCopyWarning Triggers Inconsistently Based On Number of Columns
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2019-06-10T00:07:01Z
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#### Code Sample, a copy-pastable example if possible ```python import pandas as pd divider_one = '=' * 75 divider_two = '+' * 75 divider_three = '#' * 75 #################################################################################################### # There are three declarations for the `base_df_*...
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PERF: building MultiIndex with categorical levels
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2019-06-07T22:15:10Z
2019-06-08T21:22:31Z
2019-06-08T21:04:28Z
CONTRIBUTOR
null
- [x] closes #22044 - [x] tests added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry ```python df = pd.DataFrame({ 'a': np.arange(1_000_000, dtype=np.int32), 'b': np.arange(1_000_000, dtype=np.int64), 'c': np.arange(1_000_000, dtype=float), }).a...
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REF: Refactor signature of RangeIndex._simple_new
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11
2019-06-07T22:25:36Z
2019-06-14T15:54:47Z
2019-06-14T12:42:00Z
CONTRIBUTOR
null
This PR refactors ``RangeIndex._simple_new``, so its signature is the same as ``Index._simple_new``. This will help typing later on, as currently mypy complains about the different signatures. In short a ``_simple_new`` now expects a ``range`` as its input. As a ``range`` is immutable, the code is easy to reason about....
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26,723
DOC/CI: Doc build is failing with sphinx 2.1
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4
2019-06-07T23:15:03Z
2020-05-08T03:19:05Z
2020-05-08T03:19:05Z
MEMBER
null
The doc build is failing with: ``` Recursion error: maximum recursion depth exceeded while calling a Python object This can happen with very large or deeply nested source files. You can carefully increase the default Python recursion limit of 1000 in conf.py with e.g.: import sys; sys.setrecursionlimit(1500...
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453,731,500
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26,724
Set index with prepend
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8
2019-06-07T23:55:57Z
2019-06-10T12:57:08Z
2019-06-10T12:57:08Z
NONE
null
Associated issue: https://github.com/pandas-dev/pandas/issues/26742 This PR adds the ability to _prepend_ indices to existing ones using `.set_index()`, in the same vein as the `append` argument. This avoid having to do the awkward alternatives: - `.reset_index().set_index(...)` - `.set_index(append=True).swapl...
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MDU6SXNzdWU0NTM3Mzc1MDM=
26,725
CI 3.7 NumPy Dev Failures
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2019-06-08T00:41:16Z
2019-06-08T02:05:35Z
2019-06-08T02:05:35Z
MEMBER
null
Quite a few CI failures lately so apologies if this was missed but I don't think we have an issue for this one. It looks like we are getting some failures with error message checking on NumPy dev. I think this is a result of this change upstream: https://github.com/numpy/numpy/pull/13721/files Here's a sample bui...
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453,738,026
MDExOlB1bGxSZXF1ZXN0Mjg2MzY4MDE5
26,726
Fix broken np_dev CI
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2019-06-08T00:46:21Z
2019-06-08T02:13:13Z
2019-06-08T02:05:35Z
MEMBER
null
- [X] closes #26725 - [ ] tests added / passed - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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26,727
CI: pin to sphinx 2.0.1
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1
2019-06-08T03:33:45Z
2019-06-08T04:24:56Z
2019-06-08T04:24:53Z
CONTRIBUTOR
null
xref https://github.com/pandas-dev/pandas/issues/26723 (leaving open, to unpin).
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453,760,630
MDU6SXNzdWU0NTM3NjA2MzA=
26,728
Import pandas is stopping python service
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2019-06-08T06:00:46Z
2019-06-08T11:32:38Z
2019-06-08T11:32:38Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd ``` #### Problem description I just imported the pandas library which is restarting the shell and throwing an alert pop up stating PYTHON HAS STOPPED WORKING and this is in win 10[64bit] Version: C:\>python --version Python 3....
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26,729
TST: troubleshot numexpr test
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2019-06-08T06:56:51Z
2019-08-24T12:01:35Z
2019-06-08T08:35:22Z
MEMBER
null
seemingly unrelated test failure to changes in PR #26662 https://dev.azure.com/pandas-dev/pandas/_build/results?buildId=12414 ``` _______ TestAlignment.test_basic_series_frame_alignment[numexpr-python] ________ [gw0] linux -- Python 3.6.8 /home/vsts/miniconda3/envs/pandas-dev/bin/python self = <pandas.tests....
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453,768,545
MDU6SXNzdWU0NTM3Njg1NDU=
26,730
Series.round behavior with ExtensionArrays
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16
2019-06-08T07:55:45Z
2019-08-02T14:58:51Z
2019-07-08T01:52:50Z
NONE
null
@TomAugspurger, in your blog post [Moral Philosophy for pandas or: What is .values?](https://tomaugspurger.github.io/pandas-moral-philosophy.html) you wrote > In pandas 0.24, we'll (hopefully) have a good answer for what series.values is: a NumPy array or an ExtensionArray. For regular data types represented by NumP...
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453,781,100
MDU6SXNzdWU0NTM3ODExMDA=
26,731
.astype() and Decimal
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2019-06-08T10:46:31Z
2021-11-08T20:13:44Z
2019-07-18T20:02:30Z
NONE
null
Begin from 0.24.0 next code raise exception ```python import decimal import pandas as pd ser = pd.Series([1, 2]) ser.astype(decimal.Decimal) ``` Traceback ``` Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/shadchin/t_d/venv/local/lib/python2.7/site-packages/pandas/core...
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26,732
Remove isort dep
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2019-06-08T11:21:01Z
2019-12-25T20:36:04Z
2019-06-08T19:52:20Z
CONTRIBUTOR
null
#LondonPythonSprints - [x] closes #26661 - [x] tests added / passed - [x] passes git diff upstream/master -u -- "*.py" | flake8 --diff cc @datapythonista
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453,796,045
MDExOlB1bGxSZXF1ZXN0Mjg2NDA1NTA5
26,733
[TST] Fixturize frame/test_rank.py
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2019-06-08T13:49:08Z
2019-06-08T14:36:08Z
2019-06-08T14:31:50Z
CONTRIBUTOR
null
xref #22471
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453,796,191
MDU6SXNzdWU0NTM3OTYxOTE=
26,734
test failures locally with matplotlib: 3.0.3
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2019-06-08T13:50:43Z
2019-06-08T15:06:47Z
2019-06-08T15:06:47Z
MEMBER
null
since #26715 ``` __________________ TestDataFramePlots.test_df_grid_settings ___________________ [gw1] win32 -- Python 3.7.3 C:\Users\simon\Anaconda3\envs\pandas-dev\python.exe self = <pandas.tests.plotting.test_frame.TestDataFramePlots object at 0x0000016EE807BD30> @pytest.mark.slow def test_df_gri...
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MDExOlB1bGxSZXF1ZXN0Mjg2NDA2MzY5
26,735
TST: return pytest MarkDecorator from td.skip_if_no
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2019-06-08T14:01:56Z
2019-06-09T17:48:35Z
2019-06-08T19:51:09Z
MEMBER
null
`skip_if_no` returns a decorator that applies a pytest mark. pytest marks are decorators and can be applied directly to test functions. This PR changes `skip_if_no` to return just the pytest mark. `skip_if_no` can then be used in (pytest.param(... , marks=) situations. eg. pandas/tests/io/test_html.py could...
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MDExOlB1bGxSZXF1ZXN0Mjg2NDA2NDIx
26,736
read_excel and Excel File Engine conflict
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2019-06-08T14:02:54Z
2019-12-25T20:35:17Z
2019-06-10T21:55:10Z
CONTRIBUTOR
null
- [x] closes #26566 - [x] tests added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry cc. @WillAyd Note I only decided to raise an error when the engine specified to `read_excel` was different to that of the ExcelFile - otherwise around 15 test cases would n...
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MDExOlB1bGxSZXF1ZXN0Mjg2NDA3OTI1
26,737
TST: Fix mpl 3.0.3 grid settings test failure
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2019-06-08T14:27:11Z
2019-06-08T15:08:04Z
2019-06-08T15:06:47Z
MEMBER
null
- [ ] closes #26734 - [ ] tests added / passed - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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453,802,595
MDExOlB1bGxSZXF1ZXN0Mjg2NDA5OTc0
26,738
CLN: remove Panel-specific parts of core.generic
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2019-06-08T14:58:14Z
2019-06-10T08:00:40Z
2019-06-09T18:42:52Z
MEMBER
null
xref #25632 removed small amount of code related to self.ndim > 2 also a few changes to make the NotImplemented errors for self.ndim>2 more consistent and added test for these. (might be worth having a decorator for these)
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453,804,196
MDExOlB1bGxSZXF1ZXN0Mjg2NDExMDE5
26,739
TST/CLN: remove TestData from tests\frame\test_rank.py
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2019-06-08T15:15:58Z
2019-06-08T17:04:06Z
2019-06-08T17:03:15Z
MEMBER
null
follow-on from #26733
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MDExOlB1bGxSZXF1ZXN0Mjg2NDI3Mjkx
26,740
Move ExcelWriter Tests
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2019-06-08T19:56:05Z
2019-06-09T01:06:17Z
2019-06-08T21:25:20Z
MEMBER
null
Because read_excel and ExcelWriter have different parametrization requirements it makes things clearer for now to separate these out. Maybe longer term they can be more intelligently combined but for now I think this still helps clean up requirements for adding new engines @simonjayhawkins
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26,741
Remove isort dep
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2019-06-08T20:43:36Z
2019-12-25T20:32:50Z
2019-06-08T21:44:11Z
CONTRIBUTOR
null
- Follow up from #26732 ( i missed a file )
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26,742
ENH: allow prepending indices using set_index
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2019-06-08T21:21:48Z
2021-07-10T02:33:59Z
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NONE
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I'd like to be able to _prepend_ indices to existing ones using `.set_index()`, in the same vein as the `append` argument. This avoid having to do the awkward alternatives: - `.reset_index().set_index(...)` - `.set_index(append=True).swaplevel(...)` or `.set_index(append=True).reorder_levels(...)` My first sugg...
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26,743
groupby.agg should refuse non-aggregation operations
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2019-06-08T21:36:15Z
2019-07-14T22:37:40Z
2019-07-14T22:37:33Z
NONE
null
Since `groupby.agg()` is, ["by definition a reducer."](https://github.com/pandas-dev/pandas/issues/14741#issuecomment-262953242) (in other words, produces one value per series in a group), it seems odd that it accepts non-aggregating operations such as 'rank': Related to https://github.com/pandas-dev/pandas/issues/2...
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Deprecated Series.ftype, Series.ftypes and DataFrame.ftypes features
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2019-06-08T22:21:44Z
2019-06-11T00:19:03Z
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CONTRIBUTOR
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Deprecation of `Series.ftype`, `Series.ftypes` and `DataFrame.ftypes` closes #26705 - [x] Updated the docstrings for the sphinx documentation - [x] Updated the unit tests for testing deprecation warnings
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PLOT: Split plotting tests
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2019-06-08T23:39:44Z
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MEMBER
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#26414 splitted the pandas plotting code into two different modules: - `pandas.plotting`: Generic plotting framework that defined an API (with docs) and is able to plot with a selectable backend (will be selectable with a pandas option) - `pandas.plotting._matplotlib`: Matplotlib backend Our tests in `pandas/tests...
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Read from HDF with empty `where` throws an error
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2019-06-09T00:05:52Z
2019-06-11T12:20:37Z
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- [x] closes #26610 - [x] tests added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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API: Define API for pandas plotting backends
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In #26414 we splitted the pandas plotting module into a general plotting framework able to call different backends and the current matplotlib backends. The idea is that other backends can be implemented in a simpler way, and be used with a common API by pandas users. The API defined by the current matplotlib backend...
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PLOT: Fix imports of plotting
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2019-06-11T18:46:38Z
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MEMBER
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After #26745 we should be able to move imports in `pandas/plotting/_matplotlib/*` to the top of the file, as they shouldn't create cycles. See https://github.com/pandas-dev/pandas/pull/26414#discussion_r291821639
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CONTRIBUTOR
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- [x] related to #23334 - [x] passes git diff upstream/master -u -- "*.py" | flake8 --diff
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move late imports to top
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CONTRIBUTOR
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- [x] closes #26748 - [ ] tests added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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Deprecated Series.ftype, Series.ftypes and DataFrame.ftypes features
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2019-06-09T08:54:22Z
2019-06-09T11:39:24Z
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CONTRIBUTOR
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Deprecation of `Series.ftype`, `Series.ftypes` and `DataFrame.ftypes` closes #26705 - [x] Updated the docstrings for the sphinx documentation - [x] Updated the unit tests for testing deprecation warnings - [x] Added Git Issue Number to unit tests
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DOC: Skip creating redirects if docs build fails
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2019-06-09T10:00:01Z
2019-06-09T21:51:58Z
2019-06-09T21:51:39Z
MEMBER
null
When the doc build fails, we still try to create the redirected pages, which fails, and adds to the log a misleading error (it looks in the logs like the problem is not the original error but that something is failing in the redirects). See for example https://travis-ci.org/pandas-dev/pandas/jobs/542714631: ``` Re...
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453,888,974
MDExOlB1bGxSZXF1ZXN0Mjg2NDY1MDQ0
26,753
PLOT: Add option to specify the plotting backend
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2019-06-09T11:33:34Z
2019-06-21T09:37:18Z
2019-06-21T09:37:18Z
MEMBER
null
- [x] closes #14130 - [x] tets added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry Adding option to specify the plotting backend. This does not change the plotting API, so for now backends are expected to implement the existing methods in the matplotlib API. Th...
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453,900,786
MDExOlB1bGxSZXF1ZXN0Mjg2NDcyODE5
26,754
DOC: warning on look-ahead bias with resampling
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2019-06-09T14:03:32Z
2019-06-12T18:52:34Z
2019-06-12T18:52:30Z
CONTRIBUTOR
null
- [x] closes #11123 - [ ] tests added / passed - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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453,908,108
MDExOlB1bGxSZXF1ZXN0Mjg2NDc3NDU3
26,755
Split test_excel into submodule
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2019-06-09T15:18:50Z
2019-06-10T02:27:44Z
2019-06-09T21:51:12Z
MEMBER
null
- [X] closes #24472 @simonjayhawkins Just moved everything as is. Some of the class structures are unnecessary now but leaving for follow ups
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26,756
TST/CLN: reuse float_frame fixture in tests\io\formats\test_format.py
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2019-06-09T21:17:33Z
2019-06-10T07:59:54Z
2019-06-09T21:58:23Z
MEMBER
null
follow-on from #26603
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26,757
BLD: fix build warnings
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2019-06-10T01:58:04Z
2019-06-12T16:52:48Z
2019-06-12T15:44:56Z
MEMBER
null
xref #25995, #17936 AFAICT these warnings are caused by cython casting `len(some_ndarray)` to `int` or `Py_ssize_t` but casting `len(some_memoryview)` to `size_t`. Easiest fix is to declare the affected len variables as `size_t` since we know they'll never be negative.
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26,758
BLD: fix build warnings in tslib by casting explicitly to object
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2019-06-10T03:20:47Z
2019-06-10T13:56:20Z
2019-06-10T12:30:42Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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BLD: use unsigned instead of signed for lengths, avoid build warnings
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2019-06-10T03:30:26Z
2019-06-22T18:07:48Z
2019-06-22T17:19:03Z
MEMBER
null
I'm much more confident about the other two BLD PRs (#26757, #26758) than this, largely because: - [ ] in a couple of comments here I wrote that a certain term should always be non-negative. I haven't actually confirmed that this is always the case - [ ] This changed things from int64_t to uint64_t, but could also...
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MDU6SXNzdWU0NTM5OTA1NjI=
26,760
Fix implicitly registered converter warning
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2019-06-10T04:14:03Z
2019-06-21T02:06:35Z
2019-06-21T02:06:35Z
CONTRIBUTOR
null
This shouldn't warn, since it's a Series.plot. The warning should only show up for `Axes.plot(datetimelike, ndarray)`. ```python In [1]: import pandas as pd In [2]: import numpy as np In [3]: ts = pd.Series(np.random.randn(1000), ...: index=pd.date_range('1/1/2000', periods=1000)...
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453,998,844
MDU6SXNzdWU0NTM5OTg4NDQ=
26,761
to_sql Out of bounds nanosecond timestamp
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13
2019-06-10T05:03:03Z
2020-03-30T16:24:41Z
2020-03-30T16:24:41Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python # Your code here df.to_sql(TableName,index=False,if_exists="replace") ``` #### Problem description I upgraded my pandas to 0.24.2 recently and encountered below error, which will not pop before. When I am using python to transfer some data to sql ...
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454,026,580
MDU6SXNzdWU0NTQwMjY1ODA=
26,762
duplicated() (and drop_duplicates()) incorrectly identifying unique/different rows as duplicates
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2019-06-10T07:02:13Z
2019-06-10T16:37:05Z
2019-06-10T16:37:04Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd s = pd.Series.from_csv('duplicated_int64-bug.csv') d = {} non_dupe_python = set() for k, val in s.iteritems(): if k not in d: d[k] = val else: if val != d[k]: non_dupe_python.add(k)...
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26,763
TST/CLN: reuse float_frame fixture in tests\reshape\test_concat.py
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2019-06-10T08:26:17Z
2019-06-11T14:50:52Z
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MEMBER
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454,097,923
MDExOlB1bGxSZXF1ZXN0Mjg2NjE4MjYz
26,764
TST/CLN: declass smaller test files in tests\io\excel
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2019-06-10T10:15:53Z
2019-06-11T14:49:29Z
2019-06-10T17:32:01Z
MEMBER
null
xref https://github.com/pandas-dev/pandas/pull/26755#pullrequestreview-247416090 the larger files `pandas/tests/io/excel/test_readers.py` and `pandas/tests/io/excel/test_writers.py` have been left for separate PRs any idiom changes other than required to declass are also omitted to make the diff easier to check.
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454,112,741
MDExOlB1bGxSZXF1ZXN0Mjg2NjMwMDc3
26,765
BUG: fix IntervalIndex for pivot table raise type error
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3
2019-06-10T10:55:26Z
2019-06-14T02:06:04Z
2019-06-13T20:41:45Z
CONTRIBUTOR
null
Close (#25814). When use IntervalIndex for pivot table, raise TypeError: cannot determine next label for type <class 'str'> - [x] closes #25814 - [x] tets added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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26,766
Annotate API-exposed Items from pandas.core.api
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2019-06-10T13:35:02Z
2021-07-10T02:36:51Z
null
MEMBER
null
We currently expose all of the following items from pandas.core.api via the API: ```python from pandas.core.api import ( # dtype Int8Dtype, Int16Dtype, Int32Dtype, Int64Dtype, UInt8Dtype, UInt16Dtype, UInt32Dtype, UInt64Dtype, CategoricalDtype, PeriodDtype, IntervalDtype, DatetimeTZDtype, ...
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26,767
astype() changes values unexpectedly
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2019-06-10T14:02:04Z
2019-06-10T14:13:09Z
2019-06-10T14:13:09Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python In[89]: df = pd.DataFrame({'a':[11111,22222,3333]}) In[90]: df Out[90]: a 0 11111 1 22222 2 3333 In[91]: df.astype('float16') Out[91]: a 0 11112.0 1 22224.0 2 3332.0 In[92]: df.astype('float32') Out[92]: ...
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MDExOlB1bGxSZXF1ZXN0Mjg2NzAyMDEz
26,768
[26660] compare int with double by subtracting during describe percen…
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2019-06-10T14:33:19Z
2019-06-11T05:35:28Z
2019-06-11T00:16:58Z
CONTRIBUTOR
null
- [x] closes #26660 - [x] tests added / passed - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry I am not sure whether I had put my issue in whatsnew entry in appropriate place.
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26,769
BLD: fix py37 build warnings
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2019-06-10T17:02:38Z
2019-06-27T22:05:10Z
2019-06-27T21:59:49Z
MEMBER
null
Not at all sure this is the optimal way to do this, cc @WillAyd for suggestions
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Fix matplotlib converter registering warning
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15
2019-06-10T17:11:09Z
2019-06-21T02:06:57Z
2019-06-21T02:06:35Z
CONTRIBUTOR
null
Closes #26760 Tests were being skipped, because the module name changed in https://github.com/pandas-dev/pandas/pull/18307/files.
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454,290,522
MDU6SXNzdWU0NTQyOTA1MjI=
26,771
HDFStore performance issue of .select_as_multiple
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2019-06-10T17:55:03Z
2020-05-16T20:38:12Z
null
CONTRIBUTOR
null
```python def init_and_store(sh_0, sh_1): 'Init DataFrame and store it using HDFStore into 2 parts' df = pd.DataFrame(np.random.rand(sh_0, sh_1)) cols1 = list(df.columns[:sh_1//2]) cols2 = list(df.columns[sh_1//2:]) with pd.HDFStore('test.h5') as store: store.put('df1', df[cols1...
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454,320,851
MDExOlB1bGxSZXF1ZXN0Mjg2Nzk1NzI3
26,772
BENCH: fix noisy asv benchmarks that were running on exhausted generators
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3
2019-06-10T19:01:43Z
2019-08-14T07:00:54Z
2019-06-21T02:03:03Z
CONTRIBUTOR
null
Generators get consumed on first use, yielding abnormally fast benchmark times on the `n>1` iterations. Fortunately we can instruct `asv` to call `setup()` prior to every sample by setting `number = 1` and `repeat` appropriately. My local runs suggest the typical number of samples is `~150-250`, so an upper limit of `2...
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454,325,091
MDExOlB1bGxSZXF1ZXN0Mjg2Nzk4OTI5
26,773
PERF: 5x speedup for read_json() with orient='index' by avoiding transpose
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8
2019-06-10T19:11:37Z
2019-07-17T11:49:32Z
2019-07-17T11:49:29Z
CONTRIBUTOR
null
The `.T` operator can be quite slow on mixed-type `DataFrame`s due to the creation of `object` dtype columns. In comparison to direct construction with `DataFrame.from_dict()` can generally be much more efficient. Making that swap inside `pd.read_json()` yields a `~5-6x` speedup for the `orient='index'` case: ``` ...
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454,343,886
MDU6SXNzdWU0NTQzNDM4ODY=
26,774
clean or remove header format after convert to excel
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2019-06-10T19:55:36Z
2019-06-10T19:59:05Z
2019-06-10T19:57:38Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python `import pandas as pd import pandas.io.formats.excel mypath = <Filepath> #print(mypath) from os import listdir from os.path import isfile, join #print (listdir(mypath)) textfiles = [ join(mypath,f) for f in listdir(mypath) if '.TXT' in f] pri...
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454,403,592
MDExOlB1bGxSZXF1ZXN0Mjg2ODYxOTAz
26,775
fix typo
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3
2019-06-10T22:39:04Z
2019-06-10T23:32:45Z
2019-06-10T23:32:39Z
CONTRIBUTOR
null
- [N/A] closes #xxxx - [none] tests added / passed - [no (online Github minor change)] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [probably not necessary either?] whatsnew entry
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MDExOlB1bGxSZXF1ZXN0Mjg2OTU3MTc5
26,776
PERF: avoid printing object in Dtype.construct_from_string message
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7
2019-06-11T07:34:05Z
2019-06-12T14:44:29Z
2019-06-12T14:44:22Z
MEMBER
null
xref https://github.com/pandas-dev/pandas/pull/26562#issuecomment-500120556
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26,777
SparseDataFrame(scipy.sparse.matrix) constructor generates lots of warnings
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0
2019-06-11T07:56:18Z
2019-09-18T14:02:12Z
2019-09-18T14:02:12Z
MEMBER
null
cc @TomAugspurger another one ... Passing a sparse matrix to the SparseDataFrame constructor can generate a flood of warning message (I think because each column of the sparse matrix is converted to a SparseSeries, triggering the warning each time): ``` In [2]: import scipy.sparse In [3]...
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26,778
REGR: Index.union preserve numerical index for range/float and int/float combinations
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2019-06-11T08:39:16Z
2019-06-27T17:24:53Z
2019-06-27T17:24:53Z
MEMBER
null
Recent change in master: ``` In [11]: index = pd.RangeIndex(0, 10) In [12]: index.union(pd.Index([0.5, 1.5])) Out[12]: Index([0.0, 0.5, 1.0, 1.5, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0], dtype='object') ``` the dtype should be float. cc @topper-123
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26,779
column type changes when assigning with loc and values
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2019-06-11T08:56:54Z
2021-07-28T01:02:24Z
2021-07-28T01:02:24Z
NONE
null
#### Code Sample, a copy-pastable example if possible ```python import pandas as pd import numpy In [34]: df = pd.DataFrame( ...: data={ ...: 'channel': [1, 2, 3], ...: 'A': ['String 1', numpy.NaN, 'String 2'], ...: 'B': [pd.Timestamp('2019-06-11 11:00:00'), n...
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DOC: fix old whatsnew examples + few sphinx warnings
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2019-06-11T15:55:32Z
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2019-06-11T12:10:08Z
2019-10-06T07:37:26Z
2019-06-12T15:12:14Z
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xref https://github.com/pandas-dev/pandas/issues/26058
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Change Scope of xlrd Import Attempt
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2019-06-11T13:17:05Z
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2019-06-12T18:09:54Z
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Moved attempt to import xlrd to global scope of module. Simplifies code a bit and keeps xlrd relevant imports within one block
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Explanation of assign by list to filtered DataFrame
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2019-06-11T14:02:25Z
2019-11-02T21:45:00Z
2019-11-02T21:44:53Z
NONE
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Based by [this question](https://stackoverflow.com/q/56544290/2901002): Why if assign scalar and Series in list, error is raised: wert = 2.5 df = pd.DataFrame([['Test', 12, None, None], ['Test2', 15, None, None]], columns=['A','B','C','D']) mask = (df['A'] == 'Test2') df.loc[mask, ['C', '...
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Add more pytest idiom to io.excel testing
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2019-06-11T14:27:58Z
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master tracker for follow-ups to #26755 and related PRs - [ ] use pytest.importorskip/not use the class structure https://github.com/pandas-dev/pandas/pull/26755#pullrequestreview-247416090 - [ ] location of fixtures https://github.com/pandas-dev/pandas/pull/26755#pullrequestreview-247404136 - [ ] imports an...
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2019-06-11T14:38:21Z
2019-06-11T19:23:30Z
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Since numpydoc is released, we can do some cleanup of what was introduced in https://github.com/pandas-dev/pandas/pull/24098 cc @FHaase
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2019-06-11T14:39:57Z
2019-06-12T09:02:14Z
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- [x] xref #24173 - [ ] tests added / passed - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Fixing some docs warnings, still many more, but will open few PRs with fixes, try to get a clean build and start failing the CI for doc warnings.
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2019-06-11T15:42:21Z
2019-06-12T13:59:30Z
2019-06-11T18:31:24Z
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this PR removes 2 unnecessary fixtures from `pandas\tests\groupby\conftest.py` and a few small changes to remove use of `tm.getSeriesData()` with a couple of exceptions: - conftest files: `pandas\conftest.py` and `pandas\tests\frame\conftest.py` (needed for fixtures) - `pandas\tests\frame\common.py` (this modul...
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xref #24173 When building the documentation `./doc/make.py html`, among other warnings we find the next: ``` /home/travis/miniconda3/envs/pandas-dev/lib/python3.6/site-packages/IPython/sphinxext/ipython_directive.py:1020: UserWarning: Code input with no code at /home/travis/build/pandas-dev/pandas/doc/source/use...
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DOC: MultiIndex from levels and codes example fails
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2019-06-11T15:55:31Z
2019-06-11T18:46:18Z
2019-06-11T18:46:14Z
MEMBER
null
In the whatsnews page, the example for the new "MultiIndex constructed from levels and codes" is failing: https://pandas-docs.github.io/pandas-docs-travis/whatsnew/v0.25.0.html#multiindex-constructed-from-levels-and-codes The example was added in #26408, @jiangyue12392 can you have a look please?
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DOC: IPython code blocks without In/Out prompts?
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2019-06-11T16:02:57Z
2021-07-07T16:12:43Z
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MEMBER
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We currently use the ipython sphinx directive to run the code examples in our rst docs. This generates output like: ``` In [3]: s = pd.Series([1, 3, 5, np.nan, 6, 8]) In [4]: s Out[4]: 0 1.0 1 3.0 2 5.0 3 NaN 4 6.0 5 8.0 dtype: float64 ``` (first code block from http://pandas.pydat...
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DOC: Add RangeIndex to the documentation and fix warnings
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2019-06-11T16:26:28Z
2019-06-14T08:22:40Z
2019-06-14T08:22:40Z
MEMBER
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xref #24173 Looks like we don't have `RangeIndex` in the documentation, and this is causing warnings: ``` pandas\doc\source\reference\index.rst:: WARNING: toctree contains reference to nonexisting document 'reference/api/pandas.DataFrame.sparse' pandas\doc\source\reference\index.rst:: WARNING: toctree contains re...
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Annotate DataFrame (API exposed items from pandas.core.api)
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2019-06-11T17:13:54Z
2020-09-25T22:43:34Z
2020-09-25T22:43:34Z
CONTRIBUTOR
null
Part of #26766 <details> <summary> - [x] Part 1 #26867 </summary> - `_constructor` - `_constructor_expanddim` - `__init__` - `axes` - `shape` - `_is_homogeneous_type` </details> <details> <summary> - [x] Part 2 (Rendering Methods) #28453 </summary> - `_repr_fits_vertical_` ...
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RuntimeWarning in DataFrame.div with fill_value=0
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2019-06-11T18:14:32Z
2019-08-20T17:45:06Z
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CONTRIBUTOR
null
Typically we silence these ```python import pandas as pd import numpy as np a = pd.DataFrame({"A": [0, 2], "B": [0, 4]}) b = pd.DataFrame({"A": [0, 2], "C": [0, 4]}, index=[0, 2]) pdf1 = pd.DataFrame({'A': np.arange(10), 'B': [np.nan, 1, 2, 3, 4] * 2, 'C': [np.n...
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DOC: Fix rolling doc with win_type triang (#22268)
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2019-06-11T19:38:13Z
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CONTRIBUTOR
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- [x] closes #22268 - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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DOC: Document existing functionality of pandas.DataFrame.to_sql() #11886
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2019-06-11T20:36:35Z
2019-08-31T19:15:42Z
2019-08-30T17:09:04Z
CONTRIBUTOR
null
- [x] Adds documentation for #11886 - [ ] doc build fails (may be related to #26723) - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] **What's new?** Adds documentation to an existing functionality. In fact, the functionality is documented at `pandas.io.sql.to_sql` but it's not visible [he...
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limit_area and limit_direction do not have an effect when interpolation method is 'pad'
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2019-06-11T21:30:21Z
2020-12-01T22:05:06Z
2020-12-01T22:05:06Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible ```python In [1]: import pandas as pd In [2]: import numpy ...
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How can i get the mean of a column and create another column with its results?
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2019-06-11T21:50:04Z
2019-06-12T01:45:11Z
2019-06-12T01:45:11Z
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So im working with a dataframe that contains info about the price at which several houses were sold in Melbourne during a certain time period. It looks like this: <img width="517" alt="5" src="https://user-images.githubusercontent.com/51389829/59308652-6de04080-8c56-11e9-88a2-6ac79ae9eaa5.png"> Now, here come...
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Error importing name 'DataFrame' from 'pandas.core.api'
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#### Code Sample, a copy-pastable example if possible ```python # Your code here import pandas ``` #### Problem description Whenever I run a script containing pandas, I get the following error: Traceback (most recent call last): File "csv.py", line 1, in <module> import pandas as pd File "C:\Use...
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454,959,569
MDExOlB1bGxSZXF1ZXN0Mjg3MzA3NzMy
26,799
TST/REF: parametrize arithmetic tests, simplify parts of core.ops
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2019-06-12T00:29:02Z
2019-06-25T18:00:19Z
2019-06-25T16:11:51Z
MEMBER
null
Parametrization is straightforward. Fixing xfailed test in test_properties is straightforward In core.ops: ATM we have a nested closure that wraps all of na_op in a try/except, but there is really only one line we want to catch. This simplifies the closure and catches only the relevant line.
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MDExOlB1bGxSZXF1ZXN0Mjg3MzI0ODI1
26,800
REF: remove unreachable code in core.internals
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4
2019-06-12T02:27:29Z
2019-06-12T14:08:25Z
2019-06-12T11:13:53Z
MEMBER
null
@TomAugspurger it looks like _sparse_blockify is never hit. Is that no longer reachable?
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https://api.github.com/repos/pandas-dev/pandas/issues/26801
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MDU6SXNzdWU0NTQ5ODcxODM=
26,801
Inconsistency between pd.Categorical(x) and x.astype('category')
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2
2019-06-12T02:49:32Z
2019-06-12T14:26:05Z
2019-06-12T03:35:51Z
CONTRIBUTOR
null
#### Code Sample, a copy-pastable example if possible So in pandas 0.24.2, this gave you the identical response... ```python ipomPython 3.7.3 (default, Mar 27 2019, 16:54:48) Type 'copyright', 'credits' or 'license' for more information IPython 7.4.0 -- An enhanced Interactive Python. Type '?' for help. In ...
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26,802
REF: Consistent optional dependency handling
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2019-06-12T03:16:04Z
2019-06-12T18:59:01Z
2019-06-12T17:56:54Z
CONTRIBUTOR
null
Standardizes how we do our optional dependency checking. 1. Adds a new `import_optional_dependency` helper that handles optional importing, raising with a nice message, and warning / raising if the version is not correct. 2. Changes inline `try / except ImportError` to use `import_optional_dependency` 3. Documents...
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454,993,525
MDU6SXNzdWU0NTQ5OTM1MjU=
26,803
when all missing data, df.count() and df.sum() maybe better to return nan than 0
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3
2019-06-12T03:21:48Z
2019-06-12T03:41:05Z
2019-06-12T03:25:04Z
NONE
null
``` >>> import numpy as np >>> import pandas as pd >>> x = np.ma.masked_all( (5,2) ) >>> df = pd.DataFrame( x, columns=('a','b')) >>> print( df.count() ) a 0 b 0 dtype: int64 >>> print( df.sum() ) a 0.0 b 0.0 dtype: float64 ``` **when all missing data, df.count() and df.sum() maybe better ...
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26,804
CLN: Implement io modules as plugins
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2019-06-12T08:56:22Z
2021-07-10T02:39:11Z
null
MEMBER
null
(following the discussion in #26710) Currently, most of the `io` functionality (csv, json, html, pickle, stata...) lives in `pandas/io`. But the `to_*` functions are implemented in `pandas/core/[generic|frame|series].py`. The tests live in `pandas/tests/io`. And their dependencies, are not explicit anywhere afaik, t...
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455,097,028
MDU6SXNzdWU0NTUwOTcwMjg=
26,805
df.groupby(group_keys=True) sometimes doesn't do anything
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1
2019-06-12T09:09:48Z
2019-06-12T18:23:21Z
2019-06-12T12:40:35Z
NONE
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According to the df.groupby docstring : ``` group_keys : bool, default True When calling apply, add group keys to index to identify pieces. ``` But it seems to work for some cases and not others: ``` df = pd.DataFrame({'key': [1, 1, 1, 2, 2, 2, 3, 3, 3], 'value': range(9)}) df.g...
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26,806
df.groupby(as_index=bool) affects .agg('sum') but not .transform('sum')
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2019-06-12T09:14:02Z
2019-06-12T19:23:39Z
2019-06-12T19:23:39Z
NONE
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from docstring: ``` as_index : bool, default True For aggregated output, return object with group labels as the index. Only relevant for DataFrame input. as_index=False is effectively "SQL-style" grouped output. ``` ```python In [26]: df=pd.DataFrame(dict(price=[10,10,20,20,30,30],color=[10,10,20,...
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455,139,844
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26,807
Split large test modules
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7
2019-06-12T10:41:44Z
2021-07-10T02:40:17Z
2021-07-10T02:40:17Z
MEMBER
null
- [ ] pandas/tests/tseries/offsets/test_offsets.py #27085 - [ ] pandas/tests/test_resample.py #17806 (has now been split, some post split cleanup required) - [ ] pandas/tests/io/test_pytables.py #18498 - [x] pandas/tests/test_window.py #19228 - [ ] pandas/tests/test_base.py #23877 - [x] pandas/tests/fram...
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26,808
Unable to set origin of inter-day aggregated intervals
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4
2019-06-12T11:07:40Z
2021-07-10T04:18:47Z
2021-07-10T04:18:47Z
CONTRIBUTOR
null
Having a series like the one bellow, which I resample to `'2D'` frequency and the sum the resulting resampler: ```python >>> dates = pandas.date_range('2019-01-01', '2019-01-10', freq='D')[[0, 4, 5, 8]] >>> dates DatetimeIndex(['2019-01-01', '2019-01-05', '2019-01-06', '2019-01-09'], dtype='datetime64[ns]', freq=...
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455,152,554
MDU6SXNzdWU0NTUxNTI1NTQ=
26,809
Enhancement: Subset selection similar to R dplyr filter
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5
2019-06-12T11:12:18Z
2019-06-12T16:39:14Z
2019-06-12T16:28:11Z
NONE
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Edited: Fixed typo This is a feature request. I start by showing how I usually work and then suggest a new method `NDFrame.subset` including an implementation sketch. I have also written a longer explanation and some examples [here (personal blog)](http://rasmuse.github.io/pandas-subset.html) and [here (jupyter n...
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455,206,456
MDExOlB1bGxSZXF1ZXN0Mjg3NTAxOTMy
26,810
DOC: Fixing some more warnings
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15
2019-06-12T13:13:20Z
2019-06-14T06:48:32Z
2019-06-14T06:45:13Z
MEMBER
null
- [X] closes #26788, xref #24173 - [ ] tests added / passed - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Fixing some more warnings in the doc build, and small improvements to the interpolation doc. CC: @jorisvandenbossche
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26,811
CLN: compat.to_str -> core.dtypes.common.ensure_str
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2019-06-12T13:50:30Z
2019-06-12T14:57:01Z
2019-06-12T14:56:56Z
CONTRIBUTOR
null
``compat.to_str`` is useful to have in cases where an object might be a ``bytes`` object, so it's moved to ``core.dtypes.common`` and renamed to ``ensure_str``.
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26,812
Multiplying nd.array by series returns incorrect result in pandas 0.23.0-0.23.4 (but is fixed in 0.24)
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2019-06-12T15:51:29Z
2019-06-12T16:22:27Z
2019-06-12T16:22:26Z
NONE
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#### Code Sample, a copy-pastable example if possible ```python In [1]: import numpy as np ...: import pandas as pd ...: ...: mat = np.random.random(size = (100,100)) ...: arr = np.random.random(size=100) ...: ...: df = pd.DataFrame(mat) ...: ser = pd.Series(arr) ...: ...: print(...
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