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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 11 new columns ({'Patient Age', 'OriginalImagePixelSpacing[x', 'Patient Gender', 'Patient ID', 'Follow-up #', 'Height]', 'View Position', 'OriginalImage[Width', 'Image Index', 'Finding Labels', 'y]'}) and 7 missing columns ({'bbox', 'image_index', 'image', 'height', 'item_id', 'width', 'ann'}).
This happened while the json dataset builder was generating data using
zip://MedVision-MT/chestxray_cd/test.json::/tmp/hf-datasets-cache/medium/datasets/74874073029572-config-parquet-and-info-Carryyy-MedVision-MT-a09d1e60/hub/datasets--Carryyy--MedVision-MT/snapshots/3c146724bc4b0a6eac31df16ceb914443ec6cf53/MedVision-MT.zip
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1831, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 644, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2272, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2218, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
Image Index: string
Finding Labels: string
Follow-up #: string
Patient ID: string
Patient Age: string
Patient Gender: string
View Position: string
OriginalImage[Width: string
Height]: string
OriginalImagePixelSpacing[x: string
y]: string
-- schema metadata --
pandas: '{"index_columns": [], "column_indexes": [], "columns": [{"name":' + 1552
to
{'image': Value('string'), 'ann': Value('string'), 'bbox': List(Value('float64')), 'image_index': Value('string'), 'item_id': Value('string'), 'width': Value('int64'), 'height': Value('int64')}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1456, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1055, in convert_to_parquet
builder.download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 894, in download_and_prepare
self._download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 970, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1702, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1833, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 11 new columns ({'Patient Age', 'OriginalImagePixelSpacing[x', 'Patient Gender', 'Patient ID', 'Follow-up #', 'Height]', 'View Position', 'OriginalImage[Width', 'Image Index', 'Finding Labels', 'y]'}) and 7 missing columns ({'bbox', 'image_index', 'image', 'height', 'item_id', 'width', 'ann'}).
This happened while the json dataset builder was generating data using
zip://MedVision-MT/chestxray_cd/test.json::/tmp/hf-datasets-cache/medium/datasets/74874073029572-config-parquet-and-info-Carryyy-MedVision-MT-a09d1e60/hub/datasets--Carryyy--MedVision-MT/snapshots/3c146724bc4b0a6eac31df16ceb914443ec6cf53/MedVision-MT.zip
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
image string | ann string | bbox list | image_index string | item_id string | width int64 | height int64 |
|---|---|---|---|---|---|---|
00010481_021.png | Atelectasis | [
763.118644067797,
551.864406779661,
160.542372881356,
68.3389830508475
] | 00010481_021 | 0 | 1,024 | 1,024 |
00028173_016.png | Atelectasis | [
564.610169491525,
500.375148967161,
112.813559322034,
137.762711864407
] | 00028173_016 | 1 | 1,024 | 1,024 |
00022416_049.png | Atelectasis | [
788.859259259259,
426.937566137566,
83.437037037037,
130.031746031746
] | 00022416_049 | 2 | 1,024 | 1,024 |
00019373_036.png | Atelectasis | [
667.496296296296,
406.349206349206,
172.292063492064,
112.69417989418
] | 00019373_036 | 3 | 1,024 | 1,024 |
00000468_017.png | Atelectasis | [
149.152542372881,
518.815826933263,
112.813559322034,
45.5593220338983
] | 00000468_017 | 4 | 1,024 | 1,024 |
00030106_008.png | Atelectasis | [
225.084745762712,
517.731081170551,
229.966101694915,
269.016949152542
] | 00030106_008 | 5 | 1,024 | 1,024 |
00002350_001.png | Atelectasis | [
726.010582010582,
481.11746031746,
148.45291005291,
88.8550264550265
] | 00002350_001 | 6 | 1,024 | 1,024 |
00025769_001.png | Atelectasis | [
701.838229166667,
572.491857638889,
103.537777777778,
63.7155555555556
] | 00025769_001 | 7 | 1,024 | 1,024 |
00002856_009.png | Atelectasis | [
217.803174603175,
637.155555555556,
216.719576719577,
101.858201058201
] | 00002856_009 | 8 | 1,024 | 1,024 |
00023176_010.png | Atelectasis | [
280.406779661017,
505.79887778072,
675.796610169491,
157.28813559322
] | 00023176_010 | 9 | 1,024 | 1,024 |
00012291_008.png | Atelectasis | [
232.677966101695,
631.629386255297,
226.71186440678,
74.8474576271186
] | 00012291_008 | 10 | 1,024 | 1,024 |
00020408_037.png | Atelectasis | [
190.372881355932,
632.714132018009,
227.796610169492,
160.542372881356
] | 00020408_037 | 11 | 1,024 | 1,024 |
00009779_001.png | Atelectasis | [
711.92380952381,
494.120634920635,
162.539682539683,
69.3502645502646
] | 00009779_001 | 12 | 1,024 | 1,024 |
00015831_008.png | Atelectasis | [
621.985185185185,
542.88253968254,
118.112169312169,
163.62328042328
] | 00015831_008 | 13 | 1,024 | 1,024 |
00000211_010.png | Atelectasis | [
353.084745762712,
535.087013373941,
101.966101694915,
168.135593220339
] | 00000211_010 | 14 | 1,024 | 1,024 |
00013508_001.png | Atelectasis | [
323.995767195767,
592.728042328042,
177.710052910053,
91.0222222222222
] | 00013508_001 | 15 | 1,024 | 1,024 |
00001170_046.png | Atelectasis | [
635.118644067797,
383.22260659428,
245.152542372881,
194.169491525424
] | 00001170_046 | 16 | 1,024 | 1,024 |
00016267_000.png | Atelectasis | [
178.440677966102,
599.087013373941,
232.135593220339,
216.949152542373
] | 00016267_000 | 17 | 1,024 | 1,024 |
00028625_000.png | Atelectasis | [
338.08253968254,
450.77671957672,
120.279365079365,
96.4402116402116
] | 00028625_000 | 18 | 1,024 | 1,024 |
00003945_004.png | Atelectasis | [
68.8813559322034,
471.087013373941,
305.898305084746,
168.135593220339
] | 00003945_004 | 19 | 1,024 | 1,024 |
00018762_002.png | Atelectasis | [
603.661016949153,
616.786447298729,
257.084745762712,
81.3559322033898
] | 00018762_002 | 20 | 1,024 | 1,024 |
00014253_010.png | Atelectasis | [
36.842328042328,
247.060317460317,
245.97671957672,
83.437037037037
] | 00014253_010 | 21 | 1,024 | 1,024 |
00005089_014.png | Atelectasis | [
179.877248677249,
476.783068783069,
138.700529100529,
71.5174603174603
] | 00005089_014 | 22 | 1,024 | 1,024 |
00011827_003.png | Atelectasis | [
568.888888888889,
471.365079365079,
306.658201058201,
123.530158730159
] | 00011827_003 | 23 | 1,024 | 1,024 |
00020124_003.png | Atelectasis | [
175.047118055556,
580.456302083333,
244.622222222222,
103.537777777778
] | 00020124_003 | 24 | 1,024 | 1,024 |
00020393_003.png | Atelectasis | [
681.583068783069,
541.798941798942,
221.053968253968,
96.4402116402116
] | 00020393_003 | 25 | 1,024 | 1,024 |
00007710_000.png | Atelectasis | [
624.152380952381,
439.940740740741,
216.719576719577,
86.6878306878307
] | 00007710_000 | 26 | 1,024 | 1,024 |
00012515_002.png | Atelectasis | [
289.084745762712,
638.137860831568,
83.5254237288136,
56.4067796610169
] | 00012515_002 | 27 | 1,024 | 1,024 |
00030635_001.png | Atelectasis | [
576.542372881356,
490.612437102754,
240.813559322034,
222.372881355932
] | 00030635_001 | 28 | 1,024 | 1,024 |
00021796_000.png | Atelectasis | [
187.118644067797,
410.341250662076,
176.813559322034,
180.067796610169
] | 00021796_000 | 29 | 1,024 | 1,024 |
00025368_014.png | Atelectasis | [
294.508474576271,
684.763837394068,
117.152542372881,
84.6101694915254
] | 00025368_014 | 30 | 1,024 | 1,024 |
00003440_000.png | Atelectasis | [
217.803174603175,
254.645502645503,
123.530158730159,
80.1862433862434
] | 00003440_000 | 31 | 1,024 | 1,024 |
00016987_019.png | Atelectasis | [
264.397883597884,
607.898412698413,
107.27619047619,
76.9354497354497
] | 00016987_019 | 32 | 1,024 | 1,024 |
00019706_014.png | Atelectasis | [
663.161904761905,
435.606349206349,
171.208465608466,
140.867724867725
] | 00019706_014 | 33 | 1,024 | 1,024 |
00000149_006.png | Atelectasis | [
603.661016949153,
460.239555746822,
249.491525423729,
90.0338983050847
] | 00000149_006 | 34 | 1,024 | 1,024 |
00001153_004.png | Atelectasis | [
307.029340277778,
253.914079861111,
97.8488888888889,
439.182222222222
] | 00001153_004 | 35 | 1,024 | 1,024 |
00000211_041.png | Cardiomegaly | [
224,
416.849725238347,
512,
430.64406779661
] | 00000211_041 | 36 | 1,024 | 1,024 |
00002763_031.png | Cardiomegaly | [
402.983050847458,
355.525423728814,
476.203389830508,
387.254237288136
] | 00002763_031 | 37 | 1,024 | 1,024 |
00021845_001.png | Cardiomegaly | [
307.741798941799,
373.84126984127,
387.928042328042,
364.088888888889
] | 00021845_001 | 38 | 1,024 | 1,024 |
00011322_002.png | Cardiomegaly | [
346.751322751323,
356.503703703704,
507.12380952381,
485.451851851852
] | 00011322_002 | 39 | 1,024 | 1,024 |
00014626_028.png | Cardiomegaly | [
332.474576271186,
354.440677966102,
438.237288135593,
401.35593220339
] | 00014626_028 | 40 | 1,024 | 1,024 |
00011402_007.png | Cardiomegaly | [
204.474576271186,
481.35593220339,
493.559322033898,
342.779661016949
] | 00011402_007 | 41 | 1,024 | 1,024 |
00022416_018.png | Cardiomegaly | [
357.587301587302,
423.686772486772,
567.805291005291,
353.25291005291
] | 00022416_018 | 42 | 1,024 | 1,024 |
00019187_000.png | Cardiomegaly | [
396.596825396825,
383.593650793651,
464.863492063492,
384.677248677249
] | 00019187_000 | 43 | 1,024 | 1,024 |
00018187_029.png | Cardiomegaly | [
342.416931216931,
421.519576719577,
512.541798941799,
460.529100529101
] | 00018187_029 | 44 | 1,024 | 1,024 |
00015304_001.png | Cardiomegaly | [
290.404232804233,
334.831746031746,
616.567195767196,
494.120634920635
] | 00015304_001 | 45 | 1,024 | 1,024 |
00028607_000.png | Cardiomegaly | [
404.182010582011,
302.32380952381,
497.371428571429,
443.191534391534
] | 00028607_000 | 46 | 1,024 | 1,024 |
00013615_052.png | Cardiomegaly | [
351.085714285714,
406.349206349206,
463.779894179894,
356.503703703704
] | 00013615_052 | 47 | 1,024 | 1,024 |
00027464_033.png | Cardiomegaly | [
295.822222222222,
229.722751322751,
520.126984126984,
395.513227513228
] | 00027464_033 | 48 | 1,024 | 1,024 |
00015770_010.png | Cardiomegaly | [
363.932203389831,
470.002267611229,
451.254237288136,
271.186440677966
] | 00015770_010 | 49 | 1,024 | 1,024 |
00009705_000.png | Cardiomegaly | [
338.08253968254,
308.825396825397,
542.88253968254,
370.590476190476
] | 00009705_000 | 50 | 1,024 | 1,024 |
00014706_018.png | Cardiomegaly | [
370.440677966102,
447.22260659428,
424.135593220339,
290.71186440678
] | 00014706_018 | 51 | 1,024 | 1,024 |
00029391_000.png | Cardiomegaly | [
315.326984126984,
370.590476190476,
485.451851851852,
377.092063492064
] | 00029391_000 | 52 | 1,024 | 1,024 |
00013062_002.png | Cardiomegaly | [
352,
340.338983050847,
398.101694915254,
395.932203389831
] | 00013062_002 | 53 | 1,024 | 1,024 |
00011502_001.png | Cardiomegaly | [
442.033898305085,
317.559322033898,
366.64406779661,
381.830508474576
] | 00011502_001 | 54 | 1,024 | 1,024 |
00009608_024.png | Cardiomegaly | [
394.305084745763,
402.748030323093,
365.559322033898,
341.694915254237
] | 00009608_024 | 55 | 1,024 | 1,024 |
00029808_003.png | Cardiomegaly | [
321.627118644068,
410.341250662076,
446.915254237288,
394.847457627119
] | 00029808_003 | 56 | 1,024 | 1,024 |
00015425_012.png | Cardiomegaly | [
385.760846560847,
288.237037037037,
445.35873015873,
356.503703703704
] | 00015425_012 | 57 | 1,024 | 1,024 |
00026338_003.png | Cardiomegaly | [
352,
345.762711864407,
439.322033898305,
314.576271186441
] | 00026338_003 | 58 | 1,024 | 1,024 |
00026889_000.png | Cardiomegaly | [
237.016949152542,
371.796610169492,
593.35593220339,
453.423728813559
] | 00026889_000 | 59 | 1,024 | 1,024 |
00015563_011.png | Cardiomegaly | [
320.744973544974,
484.368253968254,
500.622222222222,
450.77671957672
] | 00015563_011 | 60 | 1,024 | 1,024 |
00025747_000.png | Cardiomegaly | [
335.915343915344,
371.674074074074,
494.120634920635,
367.339682539683
] | 00025747_000 | 61 | 1,024 | 1,024 |
00017448_000.png | Cardiomegaly | [
355.254237288136,
483.019216763771,
478.372881355932,
392.677966101695
] | 00017448_000 | 62 | 1,024 | 1,024 |
00017514_008.png | Cardiomegaly | [
346.751322751323,
445.35873015873,
536.380952380952,
335.915343915344
] | 00017514_008 | 63 | 1,024 | 1,024 |
00018233_057.png | Cardiomegaly | [
347.661016949153,
385.898305084746,
411.118644067797,
347.118644067797
] | 00018233_057 | 64 | 1,024 | 1,024 |
00009683_005.png | Effusion | [
32.5079365079365,
359.754497354497,
274.150264550265,
301.240211640212
] | 00009683_005 | 65 | 1,024 | 1,024 |
00029596_018.png | Effusion | [
734.435555555556,
434.953489583333,
102.4,
327.68
] | 00029596_018 | 66 | 1,024 | 1,024 |
00025252_053.png | Effusion | [
14.2222222222222,
640.891267361111,
336.782222222222,
160.426666666667
] | 00025252_053 | 67 | 1,024 | 1,024 |
00016291_002.png | Effusion | [
617.244444444444,
676.162378472222,
326.542222222222,
78.5066666666667
] | 00016291_002 | 68 | 1,024 | 1,024 |
00016964_011.png | Effusion | [
729.884444444444,
553.282378472222,
92.16,
59.1644444444444
] | 00016964_011 | 69 | 1,024 | 1,024 |
00016837_002.png | Effusion | [
140.515555555556,
704.606822916667,
258.275555555556,
62.5777777777778
] | 00016837_002 | 70 | 1,024 | 1,024 |
00016417_008.png | Effusion | [
785.608465608466,
253.561904761905,
182.044444444444,
619.817989417989
] | 00016417_008 | 71 | 1,024 | 1,024 |
00022611_001.png | Effusion | [
749.226666666667,
169.851267361111,
169.528888888889,
374.328888888889
] | 00022611_001 | 72 | 1,024 | 1,024 |
00019766_023.png | Effusion | [
734.679365079365,
417.185185185185,
192.880423280423,
315.326984126984
] | 00019766_023 | 73 | 1,024 | 1,024 |
00025529_018.png | Effusion | [
724.926984126984,
167.957671957672,
184.21164021164,
603.564021164021
] | 00025529_018 | 74 | 1,024 | 1,024 |
00013031_005.png | Effusion | [
19.5047619047619,
418.268783068783,
160.372486772487,
394.42962962962997
] | 00013031_005 | 75 | 1,024 | 1,024 |
00018253_017.png | Effusion | [
135.449735449735,
263.314285714286,
147.369312169312,
532.046560846561
] | 00018253_017 | 76 | 1,024 | 1,024 |
00028509_007.png | Effusion | [
49.8455026455026,
339.166137566138,
208.050793650794,
563.4708994709
] | 00028509_007 | 77 | 1,024 | 1,024 |
00008841_025.png | Effusion | [
155.306666666667,
486.153489583333,
265.102222222222,
101.262222222222
] | 00008841_025 | 78 | 1,024 | 1,024 |
00028774_047.png | Effusion | [
53.0962962962963,
488.702645502646,
184.21164021164,
308.825396825397
] | 00028774_047 | 79 | 1,024 | 1,024 |
00027441_002.png | Effusion | [
121.362962962963,
135.449735449735,
217.803174603175,
562.387301587302
] | 00027441_002 | 80 | 1,024 | 1,024 |
00028383_002.png | Effusion | [
779.946666666667,
771.735711805556,
86.4711111111111,
56.8888888888889
] | 00028383_002 | 81 | 1,024 | 1,024 |
00028974_016.png | Effusion | [
769.354497354497,
581.892063492064,
164.706878306878,
196.131216931217
] | 00028974_016 | 82 | 1,024 | 1,024 |
00028628_015.png | Effusion | [
168.96,
153.922378472222,
172.942222222222,
409.6
] | 00028628_015 | 83 | 1,024 | 1,024 |
00030634_000.png | Effusion | [
141.653333333333,
611.309045138889,
317.44,
96.7111111111111
] | 00030634_000 | 84 | 1,024 | 1,024 |
00018980_002.png | Effusion | [
247.060317460317,
174.459259259259,
179.877248677249,
221.053968253968
] | 00018980_002 | 85 | 1,024 | 1,024 |
00013993_077.png | Effusion | [
167.822222222222,
407.646822916667,
201.386666666667,
223.004444444444
] | 00013993_077 | 86 | 1,024 | 1,024 |
00021967_000.png | Effusion | [
182.044444444444,
92.1058201058201,
365.172486772487,
586.226455026455
] | 00021967_000 | 87 | 1,024 | 1,024 |
00027875_005.png | Effusion | [
696.753439153439,
313.159788359788,
266.565079365079,
402.014814814815
] | 00027875_005 | 88 | 1,024 | 1,024 |
00014398_031.png | Effusion | [
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