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145,300
keenon/loglinear
src/main/java/com/github/keenon/loglinear/storage/ModelBatch.java
ModelBatch.writeToFileWithoutFactors
public void writeToFileWithoutFactors(String filename) throws IOException { FileOutputStream fos = new FileOutputStream(filename); writeToStreamWithoutFactors(fos); fos.close(); }
java
public void writeToFileWithoutFactors(String filename) throws IOException { FileOutputStream fos = new FileOutputStream(filename); writeToStreamWithoutFactors(fos); fos.close(); }
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Convenience function to write the current state of the modelBatch out to a file, without factors. @param filename the file to write the batch to @throws IOException
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/storage/ModelBatch.java#L112-L116
145,301
keenon/loglinear
src/main/java/com/github/keenon/loglinear/storage/ModelBatch.java
ModelBatch.writeToStreamWithoutFactors
public void writeToStreamWithoutFactors(OutputStream outputStream) throws IOException { Set<GraphicalModel.Factor> emptySet = new HashSet<>(); for (GraphicalModel model : this) { Set<GraphicalModel.Factor> cachedFactors = model.factors; model.factors = emptySet; model.writeToStream(outputStream); model.factors = cachedFactors; } }
java
public void writeToStreamWithoutFactors(OutputStream outputStream) throws IOException { Set<GraphicalModel.Factor> emptySet = new HashSet<>(); for (GraphicalModel model : this) { Set<GraphicalModel.Factor> cachedFactors = model.factors; model.factors = emptySet; model.writeToStream(outputStream); model.factors = cachedFactors; } }
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This writes the whole batch, WITHOUT FACTORS, which means that anyone loading this batch will need to include their own featurizer. Make sure that you have sufficient metadata to be able to do full featurizations. @param outputStream the outputstream to write our files to @throws IOException
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/storage/ModelBatch.java#L139-L147
145,302
dbracewell/mango
src/main/java/com/davidbracewell/tuple/Tuple2.java
Tuple2.of
public static <K, V> Tuple2<K, V> of(K key, V value) { return new Tuple2<>(key, value); }
java
public static <K, V> Tuple2<K, V> of(K key, V value) { return new Tuple2<>(key, value); }
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Of tuple 2. @param <K> the type parameter @param <V> the type parameter @param key the key @param value the value @return the tuple 2
[ "Of", "tuple", "2", "." ]
2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/tuple/Tuple2.java#L102-L104
145,303
LevelFourAB/commons
commons-types/src/main/java/se/l4/commons/types/internal/TypeFinderOverScanResult.java
TypeFinderOverScanResult.create
private <T> Set<? extends T> create(Iterable<Class<? extends T>> types) { Set<T> result = new HashSet<>(); for(Class<? extends T> t : types) { if(! Modifier.isAbstract(t.getModifiers()) && ! t.isInterface()) { T instance = factory.create(t); result.add(instance); } } return Collections.unmodifiableSet(result); }
java
private <T> Set<? extends T> create(Iterable<Class<? extends T>> types) { Set<T> result = new HashSet<>(); for(Class<? extends T> t : types) { if(! Modifier.isAbstract(t.getModifiers()) && ! t.isInterface()) { T instance = factory.create(t); result.add(instance); } } return Collections.unmodifiableSet(result); }
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Create the given types. @param types @return
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aa121b3a5504b43d0c10450a1b984694fcd2b8ee
https://github.com/LevelFourAB/commons/blob/aa121b3a5504b43d0c10450a1b984694fcd2b8ee/commons-types/src/main/java/se/l4/commons/types/internal/TypeFinderOverScanResult.java#L94-L108
145,304
duraspace/fcrepo-cloudsync
fcrepo-cloudsync-service/src/main/java/org/duraspace/fcrepo/cloudsync/service/dao/TaskDao.java
TaskDao.updateIdleTask
private void updateIdleTask(final Task orig, Task mods) { // only allow transition to "starting" state String newState = StringUtil.normalize(mods.getState()); if (newState != null && !newState.equals(Task.IDLE) && !newState.equals(Task.STARTING)) { throw new IllegalArgumentException("Illegal state transition: " + Task.IDLE + " -> " + newState); } if (newState != null) { orig.setState(newState); } // At this point, id, activeLogId, and state have been validated/set. // Now we need to validate/set name, type, schedule, and data. if (StringUtil.normalize(mods.getName()) != null) { orig.setName(StringUtil.validate("name", mods.getName(), 256)); } if (StringUtil.normalize(mods.getType()) != null) { orig.setType(StringUtil.validate("type", mods.getType(), 32)); } if (StringUtil.normalize(mods.getSchedule()) != null) { orig.setSchedule(StringUtil.validate("schedule", mods.getType(), 1024)); } if (StringUtil.normalize(mods.getData()) != null) { orig.setData(StringUtil.validate("data", mods.getData(), 32672)); } // Validate schedule content, type-specific data, // and do dependency determination final TaskRunner runner = TaskRunner.getInstance(orig, this, objectSetDao, objectStoreDao, null, null, new HttpClientConfig()); // Finally, update the necessary tables in a transaction final int taskId = Integer.parseInt(orig.getId()); tt.execute(new TransactionCallbackWithoutResult() { public void doInTransactionWithoutResult(TransactionStatus status) { boolean success = false; try { db.update(UPDATE_SQL, orig.getName(), orig.getType(), orig.getState(), orig.getSchedule(), orig.getData(), taskId); db.update("DELETE FROM TaskSetDeps WHERE taskId = ?", taskId); db.update("DELETE FROM TaskStoreDeps WHERE taskId = ?", taskId); for (String setId: runner.getRelatedSetIds()) { db.update(INSERT_SQL2, taskId, Integer.parseInt(setId)); } for (String storeId: runner.getRelatedStoreIds()) { db.update(INSERT_SQL3, taskId, Integer.parseInt(storeId)); } success = true; } finally { if (!success) { status.setRollbackOnly(); } } } }); }
java
private void updateIdleTask(final Task orig, Task mods) { // only allow transition to "starting" state String newState = StringUtil.normalize(mods.getState()); if (newState != null && !newState.equals(Task.IDLE) && !newState.equals(Task.STARTING)) { throw new IllegalArgumentException("Illegal state transition: " + Task.IDLE + " -> " + newState); } if (newState != null) { orig.setState(newState); } // At this point, id, activeLogId, and state have been validated/set. // Now we need to validate/set name, type, schedule, and data. if (StringUtil.normalize(mods.getName()) != null) { orig.setName(StringUtil.validate("name", mods.getName(), 256)); } if (StringUtil.normalize(mods.getType()) != null) { orig.setType(StringUtil.validate("type", mods.getType(), 32)); } if (StringUtil.normalize(mods.getSchedule()) != null) { orig.setSchedule(StringUtil.validate("schedule", mods.getType(), 1024)); } if (StringUtil.normalize(mods.getData()) != null) { orig.setData(StringUtil.validate("data", mods.getData(), 32672)); } // Validate schedule content, type-specific data, // and do dependency determination final TaskRunner runner = TaskRunner.getInstance(orig, this, objectSetDao, objectStoreDao, null, null, new HttpClientConfig()); // Finally, update the necessary tables in a transaction final int taskId = Integer.parseInt(orig.getId()); tt.execute(new TransactionCallbackWithoutResult() { public void doInTransactionWithoutResult(TransactionStatus status) { boolean success = false; try { db.update(UPDATE_SQL, orig.getName(), orig.getType(), orig.getState(), orig.getSchedule(), orig.getData(), taskId); db.update("DELETE FROM TaskSetDeps WHERE taskId = ?", taskId); db.update("DELETE FROM TaskStoreDeps WHERE taskId = ?", taskId); for (String setId: runner.getRelatedSetIds()) { db.update(INSERT_SQL2, taskId, Integer.parseInt(setId)); } for (String storeId: runner.getRelatedStoreIds()) { db.update(INSERT_SQL3, taskId, Integer.parseInt(storeId)); } success = true; } finally { if (!success) { status.setRollbackOnly(); } } } }); }
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allow prop changes and state transition to "starting"
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2d90e2c9c84a827f2605607ff40e116c67eff9b9
https://github.com/duraspace/fcrepo-cloudsync/blob/2d90e2c9c84a827f2605607ff40e116c67eff9b9/fcrepo-cloudsync-service/src/main/java/org/duraspace/fcrepo/cloudsync/service/dao/TaskDao.java#L231-L290
145,305
LevelFourAB/commons
commons-config/src/main/java/se/l4/commons/config/ConfigKey.java
ConfigKey.asObject
public <T> T asObject(Class<T> type) { return config.asObject(key, type); }
java
public <T> T asObject(Class<T> type) { return config.asObject(key, type); }
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Get this object as another type. @param type @return
[ "Get", "this", "object", "as", "another", "type", "." ]
aa121b3a5504b43d0c10450a1b984694fcd2b8ee
https://github.com/LevelFourAB/commons/blob/aa121b3a5504b43d0c10450a1b984694fcd2b8ee/commons-config/src/main/java/se/l4/commons/config/ConfigKey.java#L77-L80
145,306
dbracewell/mango
src/main/java/com/davidbracewell/reflection/BeanUtils.java
BeanUtils.getBean
public static <T> T getBean(Class<T> clazz) throws ReflectionException { return parameterizeObject(Reflect.onClass(clazz).create().<T>get()); }
java
public static <T> T getBean(Class<T> clazz) throws ReflectionException { return parameterizeObject(Reflect.onClass(clazz).create().<T>get()); }
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Constructs a new instance of the given class and then sets it properties using configuration. @param clazz The class that we want to instantiate @return A new instance of the given class
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2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/reflection/BeanUtils.java#L66-L68
145,307
dbracewell/mango
src/main/java/com/davidbracewell/reflection/BeanUtils.java
BeanUtils.parameterizeObject
public static <T> T parameterizeObject(T object) { if (object == null) { return null; } BeanMap beanMap = new BeanMap(object); List<Class<?>> list = ReflectionUtils.getAncestorClasses(object); Collections.reverse(list); for (Class<?> clazz : list) { doParametrization(beanMap, clazz.getName()); } return object; }
java
public static <T> T parameterizeObject(T object) { if (object == null) { return null; } BeanMap beanMap = new BeanMap(object); List<Class<?>> list = ReflectionUtils.getAncestorClasses(object); Collections.reverse(list); for (Class<?> clazz : list) { doParametrization(beanMap, clazz.getName()); } return object; }
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Sets properties on an object using the values defined in the Config. Will set properties defined in the Config for all of this object's super classes as well. @param object The object to parameterize @return The object
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2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/reflection/BeanUtils.java#L168-L181
145,308
josueeduardo/snappy
snappy/src/main/java/io/joshworks/snappy/http/MediaType.java
MediaType.valueOf
public static MediaType valueOf(String type) throws IllegalArgumentException { if (type == null || type.trim().isEmpty() || type.startsWith(SUBTYPE_SEPARATOR) || type.endsWith(SUBTYPE_SEPARATOR)) { throw new IllegalArgumentException("Invalid mime type '" + type + "'"); } String[] splitType = type.split(SUBTYPE_SEPARATOR); if (splitType.length == 2) { nonEmpty(type, splitType[0]); nonEmpty(type, splitType[1]); Map<String, String> parameters = new HashMap<>(); String subType = splitType[1]; if (splitType[1].contains(PARAMETERS_SEPARATOR)) { String[] subTypeWithparameter = splitType[1].split(PARAMETERS_SEPARATOR); String paramString = subTypeWithparameter[1].trim(); subType = subTypeWithparameter[0]; parameters = parseParameters(paramString); } return new MediaType(splitType[0].trim(), subType.trim(), parameters); } if (!type.contains(SUBTYPE_SEPARATOR)) { String mimeType = mimeMappings.getMimeType(type); if (mimeType != null) { return valueOf(mimeType); } } throw new IllegalArgumentException("Invalid mime type '" + type + "'"); }
java
public static MediaType valueOf(String type) throws IllegalArgumentException { if (type == null || type.trim().isEmpty() || type.startsWith(SUBTYPE_SEPARATOR) || type.endsWith(SUBTYPE_SEPARATOR)) { throw new IllegalArgumentException("Invalid mime type '" + type + "'"); } String[] splitType = type.split(SUBTYPE_SEPARATOR); if (splitType.length == 2) { nonEmpty(type, splitType[0]); nonEmpty(type, splitType[1]); Map<String, String> parameters = new HashMap<>(); String subType = splitType[1]; if (splitType[1].contains(PARAMETERS_SEPARATOR)) { String[] subTypeWithparameter = splitType[1].split(PARAMETERS_SEPARATOR); String paramString = subTypeWithparameter[1].trim(); subType = subTypeWithparameter[0]; parameters = parseParameters(paramString); } return new MediaType(splitType[0].trim(), subType.trim(), parameters); } if (!type.contains(SUBTYPE_SEPARATOR)) { String mimeType = mimeMappings.getMimeType(type); if (mimeType != null) { return valueOf(mimeType); } } throw new IllegalArgumentException("Invalid mime type '" + type + "'"); }
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Creates a new instance of MediaType by parsing the supplied string. @param type the media type string @return the newly created MediaType @throws IllegalArgumentException if the supplied string cannot be parsed or is null
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d95a9e811eda3c24a5e53086369208819884fa49
https://github.com/josueeduardo/snappy/blob/d95a9e811eda3c24a5e53086369208819884fa49/snappy/src/main/java/io/joshworks/snappy/http/MediaType.java#L221-L246
145,309
devcon5io/common
mixin/src/main/java/io/devcon5/mixin/Mixin.java
Mixin.invoke
private static Object invoke(final Object target, final Method method, Object... args) { try { return method.invoke(target, args); } catch (IllegalAccessException | InvocationTargetException e) { throw new RuntimeException(e); } }
java
private static Object invoke(final Object target, final Method method, Object... args) { try { return method.invoke(target, args); } catch (IllegalAccessException | InvocationTargetException e) { throw new RuntimeException(e); } }
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Invokes the specified method on the specified object and wrapping all exceptions in a RuntimeException. @param target the target object on which the method should be invoked. May be null for static method invocation @param method the method to be invoked @param args the arguments to be passed to the method. May be empty @return the result of the invocation
[ "Invokes", "the", "specified", "method", "on", "the", "specified", "object", "and", "wrapping", "all", "exceptions", "in", "a", "RuntimeException", "." ]
363688e0dc904d559682bf796bd6c836b4e0efc7
https://github.com/devcon5io/common/blob/363688e0dc904d559682bf796bd6c836b4e0efc7/mixin/src/main/java/io/devcon5/mixin/Mixin.java#L69-L76
145,310
devcon5io/common
mixin/src/main/java/io/devcon5/mixin/Mixin.java
Mixin.invokeDefault
private static Object invokeDefault(final Object proxy, final Method method, final Object[] args) { final Class<?> declaringClass = method.getDeclaringClass(); try { return lookupIn(declaringClass).unreflectSpecial(method, declaringClass) .bindTo(proxy) .invokeWithArguments(args); } catch (Throwable throwable) { throw new RuntimeException(throwable); } }
java
private static Object invokeDefault(final Object proxy, final Method method, final Object[] args) { final Class<?> declaringClass = method.getDeclaringClass(); try { return lookupIn(declaringClass).unreflectSpecial(method, declaringClass) .bindTo(proxy) .invokeWithArguments(args); } catch (Throwable throwable) { throw new RuntimeException(throwable); } }
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Invokes a default method. Default methods are implemented in an interface which is overrided by applying the interface to the proxy. This method allows to invoke the default method on the proxy itselfs bypassing the overriden method. @param proxy the proxy object on which the method should be invoked @param method the method to be invoked @param args arguments that are passed to the method @return the return value of the invocation @throws Throwable
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363688e0dc904d559682bf796bd6c836b4e0efc7
https://github.com/devcon5io/common/blob/363688e0dc904d559682bf796bd6c836b4e0efc7/mixin/src/main/java/io/devcon5/mixin/Mixin.java#L89-L99
145,311
devcon5io/common
mixin/src/main/java/io/devcon5/mixin/Mixin.java
Mixin.lookupIn
private static MethodHandles.Lookup lookupIn(final Class<?> declaringClass) { try { final Constructor<MethodHandles.Lookup> constructor = MethodHandles.Lookup.class.getDeclaredConstructor( Class.class, int.class); constructor.setAccessible(true); return constructor.newInstance(declaringClass, MethodHandles.Lookup.PRIVATE); } catch (NoSuchMethodException | InvocationTargetException | InstantiationException | IllegalAccessException e) { throw new RuntimeException(e); } }
java
private static MethodHandles.Lookup lookupIn(final Class<?> declaringClass) { try { final Constructor<MethodHandles.Lookup> constructor = MethodHandles.Lookup.class.getDeclaredConstructor( Class.class, int.class); constructor.setAccessible(true); return constructor.newInstance(declaringClass, MethodHandles.Lookup.PRIVATE); } catch (NoSuchMethodException | InvocationTargetException | InstantiationException | IllegalAccessException e) { throw new RuntimeException(e); } }
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Creates a method lookup that is capable of accessing private members of declaring classes this Mixin factory has usually no access to. @param declaringClass @return @throws NoSuchMethodException @throws IllegalAccessException @throws InvocationTargetException @throws InstantiationException
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363688e0dc904d559682bf796bd6c836b4e0efc7
https://github.com/devcon5io/common/blob/363688e0dc904d559682bf796bd6c836b4e0efc7/mixin/src/main/java/io/devcon5/mixin/Mixin.java#L112-L124
145,312
devcon5io/common
mixin/src/main/java/io/devcon5/mixin/Mixin.java
Mixin.newInvocable
private static Optional<Invocable> newInvocable(final Object target, final Collection<Supplier<Reader>> scripts) { Optional<Invocable> invocable; if (!scripts.isEmpty()) { final ScriptEngine engine = new ScriptEngineManager().getEngineByName("javascript"); engine.put("target", target); scripts.stream().forEach(script -> loadScript(engine, script)); invocable = Optional.of((Invocable) engine); } else { invocable = Optional.empty(); } return invocable; }
java
private static Optional<Invocable> newInvocable(final Object target, final Collection<Supplier<Reader>> scripts) { Optional<Invocable> invocable; if (!scripts.isEmpty()) { final ScriptEngine engine = new ScriptEngineManager().getEngineByName("javascript"); engine.put("target", target); scripts.stream().forEach(script -> loadScript(engine, script)); invocable = Optional.of((Invocable) engine); } else { invocable = Optional.empty(); } return invocable; }
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Creates a new invocable proxy. The proxy may be used to create interface implementations that are implemented in javascript. @param target the target object that is passed into the scripting context so that the methods in the script may access the target object. @param scripts scripts to be loaded into the engine @return the invocable instance
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363688e0dc904d559682bf796bd6c836b4e0efc7
https://github.com/devcon5io/common/blob/363688e0dc904d559682bf796bd6c836b4e0efc7/mixin/src/main/java/io/devcon5/mixin/Mixin.java#L135-L148
145,313
devcon5io/common
mixin/src/main/java/io/devcon5/mixin/Mixin.java
Mixin.loadScript
private static void loadScript(ScriptEngine engine, Supplier<Reader> scriptReader) { try (Reader reader = scriptReader.get()) { engine.eval(reader); } catch (ScriptException | IOException e) { throw new RuntimeException(e); } }
java
private static void loadScript(ScriptEngine engine, Supplier<Reader> scriptReader) { try (Reader reader = scriptReader.get()) { engine.eval(reader); } catch (ScriptException | IOException e) { throw new RuntimeException(e); } }
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Loads a single script from an URL into the script engine @param engine the engine that should evaluate the script @param scriptReader the script source to be loaded into the script
[ "Loads", "a", "single", "script", "from", "an", "URL", "into", "the", "script", "engine" ]
363688e0dc904d559682bf796bd6c836b4e0efc7
https://github.com/devcon5io/common/blob/363688e0dc904d559682bf796bd6c836b4e0efc7/mixin/src/main/java/io/devcon5/mixin/Mixin.java#L156-L164
145,314
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.addConstructor
public final void addConstructor(final SgConstructor constructor) { if (constructor == null) { throw new IllegalArgumentException("The argument 'constructor' cannot be null!"); } if (constructor.getOwner() != this) { throw new IllegalArgumentException( "The owner of 'constructor' is different from 'this'!"); } if (!constructors.contains(constructor)) { constructors.add(constructor); } }
java
public final void addConstructor(final SgConstructor constructor) { if (constructor == null) { throw new IllegalArgumentException("The argument 'constructor' cannot be null!"); } if (constructor.getOwner() != this) { throw new IllegalArgumentException( "The owner of 'constructor' is different from 'this'!"); } if (!constructors.contains(constructor)) { constructors.add(constructor); } }
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Adds a constructor to the class. Does nothing if the constructor is already in the list of constructors. You will never need to use this method in your code! A constructor is added automatically to the owning class when it's constructed! @param constructor Constructor to add - Cannot be null.
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355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L261-L272
145,315
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.addMethod
public final void addMethod(final SgMethod method) { if (method == null) { throw new IllegalArgumentException("The argument 'method' cannot be null!"); } if (method.getOwner() != this) { throw new IllegalArgumentException("The owner of 'method' is different from 'this'!"); } if (!methods.contains(method)) { methods.add(method); } }
java
public final void addMethod(final SgMethod method) { if (method == null) { throw new IllegalArgumentException("The argument 'method' cannot be null!"); } if (method.getOwner() != this) { throw new IllegalArgumentException("The owner of 'method' is different from 'this'!"); } if (!methods.contains(method)) { methods.add(method); } }
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Adds a method to the class. Does nothing if the method is already in the list of methods. You will never need to use this method in your code! A method is added automatically to the owning class when it's constructed! @param method Method to add - Cannot be null.
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355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L300-L310
145,316
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.addField
public final void addField(final SgField field) { if (field == null) { throw new IllegalArgumentException("The argument 'field' cannot be null!"); } if (field.getOwner() != this) { throw new IllegalArgumentException("The owner of 'field' is different from 'this'!"); } if (!fields.contains(field)) { fields.add(field); } }
java
public final void addField(final SgField field) { if (field == null) { throw new IllegalArgumentException("The argument 'field' cannot be null!"); } if (field.getOwner() != this) { throw new IllegalArgumentException("The owner of 'field' is different from 'this'!"); } if (!fields.contains(field)) { fields.add(field); } }
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Adds a field to the class. Does nothing if the field is already in the list of fields. You will never need to use this method in your code! A field is added automatically to the owning class when it's constructed! @param field Field to add - Cannot be null.
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355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L458-L468
145,317
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.addClass
public final void addClass(final SgClass clasz) { if (clasz == null) { throw new IllegalArgumentException("The argument 'clasz' cannot be null!"); } if (!classes.contains(clasz)) { classes.add(clasz); } }
java
public final void addClass(final SgClass clasz) { if (clasz == null) { throw new IllegalArgumentException("The argument 'clasz' cannot be null!"); } if (!classes.contains(clasz)) { classes.add(clasz); } }
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Adds an inner to this class. Does nothing if the class is already in the list of inner classes. @param clasz Inner class to add - Cannot be null.
[ "Adds", "an", "inner", "to", "this", "class", ".", "Does", "nothing", "if", "the", "class", "is", "already", "in", "the", "list", "of", "inner", "classes", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L486-L493
145,318
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.findClassByName
public final SgClass findClassByName(final String name) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } for (int i = 0; i < classes.size(); i++) { final SgClass clasz = classes.get(i); if (clasz.getName().equals(name)) { return clasz; } } return null; }
java
public final SgClass findClassByName(final String name) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } for (int i = 0; i < classes.size(); i++) { final SgClass clasz = classes.get(i); if (clasz.getName().equals(name)) { return clasz; } } return null; }
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Find an inner class by it's name. @param name Full qualified name of the class to find - Cannot be null. @return Class or null if it's not found.
[ "Find", "an", "inner", "class", "by", "it", "s", "name", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L512-L523
145,319
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.findMethodByName
public final SgMethod findMethodByName(final String name) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } for (int i = 0; i < methods.size(); i++) { final SgMethod method = methods.get(i); if (method.getName().equals(name)) { return method; } } return null; }
java
public final SgMethod findMethodByName(final String name) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } for (int i = 0; i < methods.size(); i++) { final SgMethod method = methods.get(i); if (method.getName().equals(name)) { return method; } } return null; }
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Find a method by it's name. @param name Name of the method to find - Cannot be null. @return Method or null if it's not found.
[ "Find", "a", "method", "by", "it", "s", "name", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L533-L544
145,320
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.findFieldByName
public final SgField findFieldByName(final String name) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } for (int i = 0; i < fields.size(); i++) { final SgField field = fields.get(i); if (field.getName().equals(name)) { return field; } } return null; }
java
public final SgField findFieldByName(final String name) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } for (int i = 0; i < fields.size(); i++) { final SgField field = fields.get(i); if (field.getName().equals(name)) { return field; } } return null; }
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Find a field by it's name. @param name Name of the field to find - Cannot be null. @return Field or null if it's not found.
[ "Find", "a", "field", "by", "it", "s", "name", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L554-L565
145,321
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.hasInterface
public final boolean hasInterface(final SgClass intf) { if (intf == null) { throw new IllegalArgumentException("The argument 'intf' cannot be null!"); } if (!intf.isInterface()) { throw new IllegalArgumentException( "The argument 'intf' is a class an not an interface!"); } for (int i = 0; i < interfaces.size(); i++) { if (interfaces.get(i).equals(intf)) { return true; } } if (superClass != null) { return superClass.hasInterface(intf); } return false; }
java
public final boolean hasInterface(final SgClass intf) { if (intf == null) { throw new IllegalArgumentException("The argument 'intf' cannot be null!"); } if (!intf.isInterface()) { throw new IllegalArgumentException( "The argument 'intf' is a class an not an interface!"); } for (int i = 0; i < interfaces.size(); i++) { if (interfaces.get(i).equals(intf)) { return true; } } if (superClass != null) { return superClass.hasInterface(intf); } return false; }
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Checks if this class or any of it's super classes has a given interface. @param intf Interface to find - Cannot be <code>null</code>. @return If the class implements the interface <code>true</code> else <code>false</code>.
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355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L725-L744
145,322
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.create
public static SgClass create(final SgClassPool pool, final Class<?> clasz) { if (pool == null) { throw new IllegalArgumentException("The argument 'pool' cannot be null!"); } if (clasz == null) { throw new IllegalArgumentException("The argument 'clasz' cannot be null!"); } final SgClass cached = pool.get(clasz.getName()); if (cached != null) { return cached; } try { final SgClass cl = createClass(pool, clasz); addInterfaces(pool, cl, clasz); addFields(pool, cl, clasz); addConstructors(pool, cl, clasz); addMethods(pool, cl, clasz); addInnerClasses(pool, cl, clasz); return cl; } catch (final RuntimeException ex) { System.out.println("ERROR CLASS: " + clasz); throw ex; } }
java
public static SgClass create(final SgClassPool pool, final Class<?> clasz) { if (pool == null) { throw new IllegalArgumentException("The argument 'pool' cannot be null!"); } if (clasz == null) { throw new IllegalArgumentException("The argument 'clasz' cannot be null!"); } final SgClass cached = pool.get(clasz.getName()); if (cached != null) { return cached; } try { final SgClass cl = createClass(pool, clasz); addInterfaces(pool, cl, clasz); addFields(pool, cl, clasz); addConstructors(pool, cl, clasz); addMethods(pool, cl, clasz); addInnerClasses(pool, cl, clasz); return cl; } catch (final RuntimeException ex) { System.out.println("ERROR CLASS: " + clasz); throw ex; } }
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Creates a model class by analyzing the "real" class. @param pool Pool to use. @param clasz Class to analyze. @return Class.
[ "Creates", "a", "model", "class", "by", "analyzing", "the", "real", "class", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L815-L843
145,323
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgClass.java
SgClass.getNonPrimitiveClass
public static final SgClass getNonPrimitiveClass(final SgClassPool pool, final SgClass primitive) { if (primitive.equals(BOOLEAN)) { return SgClass.create(pool, Boolean.class); } if (primitive.equals(BYTE)) { return SgClass.create(pool, Byte.class); } if (primitive.equals(CHAR)) { return SgClass.create(pool, Character.class); } if (primitive.equals(SHORT)) { return SgClass.create(pool, Short.class); } if (primitive.equals(INT)) { return SgClass.create(pool, Integer.class); } if (primitive.equals(LONG)) { return SgClass.create(pool, Long.class); } if (primitive.equals(FLOAT)) { return SgClass.create(pool, Float.class); } if (primitive.equals(DOUBLE)) { return SgClass.create(pool, Double.class); } throw new IllegalArgumentException("No primitive or 'void' class: '" + primitive.getName() + "'!"); }
java
public static final SgClass getNonPrimitiveClass(final SgClassPool pool, final SgClass primitive) { if (primitive.equals(BOOLEAN)) { return SgClass.create(pool, Boolean.class); } if (primitive.equals(BYTE)) { return SgClass.create(pool, Byte.class); } if (primitive.equals(CHAR)) { return SgClass.create(pool, Character.class); } if (primitive.equals(SHORT)) { return SgClass.create(pool, Short.class); } if (primitive.equals(INT)) { return SgClass.create(pool, Integer.class); } if (primitive.equals(LONG)) { return SgClass.create(pool, Long.class); } if (primitive.equals(FLOAT)) { return SgClass.create(pool, Float.class); } if (primitive.equals(DOUBLE)) { return SgClass.create(pool, Double.class); } throw new IllegalArgumentException("No primitive or 'void' class: '" + primitive.getName() + "'!"); }
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Returns the corresponding class for a primitive. @param pool Pool to use. @param primitive Primitive class to convert. A call to {@link #isPrimitive()} on this argument must return true and a call to <code>equals(SgClass.VOID)</code> returns false else an {@link IllegalArgumentException} will be thrown. @return Non primitive class.
[ "Returns", "the", "corresponding", "class", "for", "a", "primitive", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgClass.java#L969-L996
145,324
bsblabs/embed-for-vaadin
com.bsb.common.vaadin.embed/src/main/java/com/bsb/common/vaadin/embed/EmbedVaadinConfig.java
EmbedVaadinConfig.getOpenBrowserUrl
public String getOpenBrowserUrl() { final String customUrl = getCustomBrowserUrl(); final String deployUrl = getDeployUrl(); if (customUrl == null) { return deployUrl; } else if (customUrl.startsWith("http://")) { return customUrl; } else if (customUrl.startsWith("/")) { return buildUrl(getPort(), customUrl); } else { return deployUrl + customUrl; } }
java
public String getOpenBrowserUrl() { final String customUrl = getCustomBrowserUrl(); final String deployUrl = getDeployUrl(); if (customUrl == null) { return deployUrl; } else if (customUrl.startsWith("http://")) { return customUrl; } else if (customUrl.startsWith("/")) { return buildUrl(getPort(), customUrl); } else { return deployUrl + customUrl; } }
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Returns the url to use when the browser opens, according to both the deploy url and a custom browser url, if set. @return the url to use when to open the browser
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f902e70def56ab54d287d2600f9c6eef9e66c225
https://github.com/bsblabs/embed-for-vaadin/blob/f902e70def56ab54d287d2600f9c6eef9e66c225/com.bsb.common.vaadin.embed/src/main/java/com/bsb/common/vaadin/embed/EmbedVaadinConfig.java#L310-L322
145,325
keenon/loglinear
src/main/java/com/github/keenon/loglinear/learning/LogLikelihoodDifferentiableFunction.java
LogLikelihoodDifferentiableFunction.getDeterministicAssignment
private static int getDeterministicAssignment(double[] distribution) { int assignment = -1; for (int i = 0; i < distribution.length; i++) { if (distribution[i] == 1.0) { if (assignment == -1) assignment = i; else return -1; } else if (distribution[i] != 0.0) return -1; } return assignment; }
java
private static int getDeterministicAssignment(double[] distribution) { int assignment = -1; for (int i = 0; i < distribution.length; i++) { if (distribution[i] == 1.0) { if (assignment == -1) assignment = i; else return -1; } else if (distribution[i] != 0.0) return -1; } return assignment; }
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Finds the deterministic assignment forced by a distribution, or if none exists returns -1 @param distribution the potentially deterministic distribution @return the assignment given by the distribution with probability 1, if one exists, else -1
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/learning/LogLikelihoodDifferentiableFunction.java#L124-L133
145,326
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/CliqueTree.java
CliqueTree.compileModel
public GraphicalModel compileModel() { GraphicalModel compiled = new GraphicalModel(); for (GraphicalModel.Factor factor : model.factors) { compiled.addStaticFactor(factor.neigborIndices, factor.getDimensions(), assign -> factor.getAssignmentValue(assign, weights)); } // Add any metadata for (int var = 0; var < model.numVariables(); ++var) { Map<String, String> metadata = model.getVariableMetaDataByReference(var); if (metadata.containsKey(VARIABLE_OBSERVED_VALUE)) { compiled.getVariableMetaDataByReference(var).put(VARIABLE_OBSERVED_VALUE, metadata.get(VARIABLE_OBSERVED_VALUE)); } } return compiled; }
java
public GraphicalModel compileModel() { GraphicalModel compiled = new GraphicalModel(); for (GraphicalModel.Factor factor : model.factors) { compiled.addStaticFactor(factor.neigborIndices, factor.getDimensions(), assign -> factor.getAssignmentValue(assign, weights)); } // Add any metadata for (int var = 0; var < model.numVariables(); ++var) { Map<String, String> metadata = model.getVariableMetaDataByReference(var); if (metadata.containsKey(VARIABLE_OBSERVED_VALUE)) { compiled.getVariableMetaDataByReference(var).put(VARIABLE_OBSERVED_VALUE, metadata.get(VARIABLE_OBSERVED_VALUE)); } } return compiled; }
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Compile this model into a static model, given the model and weights in this clique tree. @return A graphical model which is composed entirely of static (i.e., not featurized) factors.
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/CliqueTree.java#L191-L206
145,327
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/CliqueTree.java
CliqueTree.marginalizeMessage
private TableFactor marginalizeMessage(TableFactor message, int[] relevant, MarginalizationMethod marginalize) { TableFactor result = message; for (int i : message.neighborIndices) { boolean contains = false; for (int j : relevant) { if (i == j) { contains = true; break; } } if (!contains) { switch (marginalize) { case SUM: result = result.sumOut(i); break; case MAX: result = result.maxOut(i); break; } } } return result; }
java
private TableFactor marginalizeMessage(TableFactor message, int[] relevant, MarginalizationMethod marginalize) { TableFactor result = message; for (int i : message.neighborIndices) { boolean contains = false; for (int j : relevant) { if (i == j) { contains = true; break; } } if (!contains) { switch (marginalize) { case SUM: result = result.sumOut(i); break; case MAX: result = result.maxOut(i); break; } } } return result; }
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This is a key step in message passing. When we are calculating a message, we want to marginalize out all variables not relevant to the recipient of the message. This function does that. @param message the message to marginalize @param relevant the variables that are relevant @return the marginalized message
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/CliqueTree.java#L885-L909
145,328
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/CliqueTree.java
CliqueTree.domainsOverlap
private boolean domainsOverlap(TableFactor f1, TableFactor f2) { for (int n1 : f1.neighborIndices) { for (int n2 : f2.neighborIndices) { if (n1 == n2) return true; } } return false; }
java
private boolean domainsOverlap(TableFactor f1, TableFactor f2) { for (int n1 : f1.neighborIndices) { for (int n2 : f2.neighborIndices) { if (n1 == n2) return true; } } return false; }
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Just a quick inline to check if two factors have overlapping domains. Since factor neighbor sets are super small, this n^2 algorithm is fine. @param f1 first factor to compare @param f2 second factor to compare @return whether their domains overlap
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/CliqueTree.java#L919-L926
145,329
akberc/ceylon-maven-plugin
src/main/java/com/dgwave/car/repo/CeylonRepoLayout.java
CeylonRepoLayout.getPath
public URI getPath(final org.eclipse.aether.artifact.Artifact artifact) { return toUri(pathOf(new DefaultArtifact(artifact.getGroupId(), artifact.getArtifactId(), artifact.getBaseVersion(), "", artifact.getExtension(), artifact.getClassifier(), new DefaultArtifactHandler(artifact.getExtension())))); }
java
public URI getPath(final org.eclipse.aether.artifact.Artifact artifact) { return toUri(pathOf(new DefaultArtifact(artifact.getGroupId(), artifact.getArtifactId(), artifact.getBaseVersion(), "", artifact.getExtension(), artifact.getClassifier(), new DefaultArtifactHandler(artifact.getExtension())))); }
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The Aether implementation. @param artifact The artifact to get the path for @return URI of the artifact @see org.eclipse.aether.util.repository.layout.RepositoryLayout#getPath(org.eclipse.aether.artifact.Artifact)
[ "The", "Aether", "implementation", "." ]
b7f6c4a2b24f2fa237350c9e715f4193e83415ef
https://github.com/akberc/ceylon-maven-plugin/blob/b7f6c4a2b24f2fa237350c9e715f4193e83415ef/src/main/java/com/dgwave/car/repo/CeylonRepoLayout.java#L62-L67
145,330
akberc/ceylon-maven-plugin
src/main/java/com/dgwave/car/repo/CeylonRepoLayout.java
CeylonRepoLayout.toUri
private URI toUri(final String path) { try { return new URI(null, null, path, null); } catch (URISyntaxException e) { throw new IllegalArgumentException(e); } }
java
private URI toUri(final String path) { try { return new URI(null, null, path, null); } catch (URISyntaxException e) { throw new IllegalArgumentException(e); } }
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Converts from String to URI. @param path The string to convert @return URI if there was no exception
[ "Converts", "from", "String", "to", "URI", "." ]
b7f6c4a2b24f2fa237350c9e715f4193e83415ef
https://github.com/akberc/ceylon-maven-plugin/blob/b7f6c4a2b24f2fa237350c9e715f4193e83415ef/src/main/java/com/dgwave/car/repo/CeylonRepoLayout.java#L84-L90
145,331
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgMethod.java
SgMethod.addBodyLine
public final void addBodyLine(final String line) { if (line == null) { throw new IllegalArgumentException("The argument 'line' cannot be NULL!"); } body.add(line.trim()); }
java
public final void addBodyLine(final String line) { if (line == null) { throw new IllegalArgumentException("The argument 'line' cannot be NULL!"); } body.add(line.trim()); }
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Add a new line to the body. @param line Line to add - Cannot be null (but empty).
[ "Add", "a", "new", "line", "to", "the", "body", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgMethod.java#L96-L101
145,332
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgMethod.java
SgMethod.getSignature
public final String getSignature() { final StringBuffer sb = new StringBuffer(); if (getModifiers().length() > 0) { sb.append(getModifiers()); sb.append(" "); } sb.append(returnType.getName()); sb.append(" "); sb.append(getName()); sb.append("("); for (int i = 0; i < getArguments().size(); i++) { if (i > 0) { sb.append(", "); } sb.append(getArguments().get(i)); } sb.append(")"); if (getExceptions().size() > 0) { sb.append(" throws "); for (int i = 0; i < getExceptions().size(); i++) { if (i > 0) { sb.append(","); } sb.append(getExceptions().get(i).getName()); } } return sb.toString(); }
java
public final String getSignature() { final StringBuffer sb = new StringBuffer(); if (getModifiers().length() > 0) { sb.append(getModifiers()); sb.append(" "); } sb.append(returnType.getName()); sb.append(" "); sb.append(getName()); sb.append("("); for (int i = 0; i < getArguments().size(); i++) { if (i > 0) { sb.append(", "); } sb.append(getArguments().get(i)); } sb.append(")"); if (getExceptions().size() > 0) { sb.append(" throws "); for (int i = 0; i < getExceptions().size(); i++) { if (i > 0) { sb.append(","); } sb.append(getExceptions().get(i).getName()); } } return sb.toString(); }
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Returns the "signature" of the method. @return Modifiers, return type, name and arguments - Always non-null.
[ "Returns", "the", "signature", "of", "the", "method", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgMethod.java#L127-L154
145,333
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgMethod.java
SgMethod.getCallSignature
public final String getCallSignature() { final StringBuffer sb = new StringBuffer(); sb.append(getName()); sb.append("("); for (int i = 0; i < getArguments().size(); i++) { if (i > 0) { sb.append(", "); } final SgArgument arg = getArguments().get(i); sb.append(arg.getName()); } sb.append(")"); return sb.toString(); }
java
public final String getCallSignature() { final StringBuffer sb = new StringBuffer(); sb.append(getName()); sb.append("("); for (int i = 0; i < getArguments().size(); i++) { if (i > 0) { sb.append(", "); } final SgArgument arg = getArguments().get(i); sb.append(arg.getName()); } sb.append(")"); return sb.toString(); }
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Returns the "call" signature of the method. @return Method name and argument names (like "methodXY(a, b, c)").
[ "Returns", "the", "call", "signature", "of", "the", "method", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgMethod.java#L161-L174
145,334
chr78rm/tracelogger
src/main/java/de/christofreichardt/diagnosis/TracerConfigNamespaceContextImpl.java
TracerConfigNamespaceContextImpl.getNamespaceURI
@Override public String getNamespaceURI(String prefix) { if (prefix == null || !prefix.equals("dns")) throw new IllegalArgumentException("Accept only default namespace."); return "http://www.christofreichardt.de/java/tracer"; }
java
@Override public String getNamespaceURI(String prefix) { if (prefix == null || !prefix.equals("dns")) throw new IllegalArgumentException("Accept only default namespace."); return "http://www.christofreichardt.de/java/tracer"; }
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Returns the fixed namespace URI for the prefix "dns". Other prefixes will cause an IllegalArgumentException. @param prefix the namespace prefix @return the URI "http://www.christofreichardt.de/java/tracer"
[ "Returns", "the", "fixed", "namespace", "URI", "for", "the", "prefix", "dns", ".", "Other", "prefixes", "will", "cause", "an", "IllegalArgumentException", "." ]
ad22452b20f8111ad4d367302c2b26a100a20200
https://github.com/chr78rm/tracelogger/blob/ad22452b20f8111ad4d367302c2b26a100a20200/src/main/java/de/christofreichardt/diagnosis/TracerConfigNamespaceContextImpl.java#L90-L97
145,335
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.get
public final String get(final String key) { final Property prop = find(key); if (prop == null) { return null; } return prop.getValue(); }
java
public final String get(final String key) { final Property prop = find(key); if (prop == null) { return null; } return prop.getValue(); }
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Returns a value for a given key. @param key Key to find. @return Value or <code>null</code> if the key is unknown.
[ "Returns", "a", "value", "for", "a", "given", "key", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L331-L337
145,336
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.getStatus
public final String getStatus(final String key) { final Property prop = find(key); if (prop == null) { return null; } return prop.getStatus(); }
java
public final String getStatus(final String key) { final Property prop = find(key); if (prop == null) { return null; } return prop.getStatus(); }
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Returns a status text for a given key. @param key Key to find. @return Status text or <code>null</code> if the key is unknown.
[ "Returns", "a", "status", "text", "for", "a", "given", "key", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L347-L353
145,337
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.put
public final void put(final String key, final String value) { final Property prop = find(key); if (prop == null) { props.add(new Property(key, null, value)); } else { prop.setValue(value); } }
java
public final void put(final String key, final String value) { final Property prop = find(key); if (prop == null) { props.add(new Property(key, null, value)); } else { prop.setValue(value); } }
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Set a value for a property. If a property with the key is already known the value will be changed. Otherwise a new property will be created. @param key Key to set. @param value Value to set.
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71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L364-L371
145,338
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.isRemoved
public final boolean isRemoved(final String key) { final Property prop = find(key); if (prop == null) { return true; } return prop.isDeleted(); }
java
public final boolean isRemoved(final String key) { final Property prop = find(key); if (prop == null) { return true; } return prop.isDeleted(); }
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Returns if a property has been deleted. @param key Key for the property to check. @return If the property is unknown or has been deleted <code>true</code> else <code>false</code>.
[ "Returns", "if", "a", "property", "has", "been", "deleted", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L395-L401
145,339
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.getKeyList
public final List<String> getKeyList() { final List<String> keys = new ArrayList<>(); final Iterator<String> it = keyIterator(); while (it.hasNext()) { keys.add(it.next()); } return keys; }
java
public final List<String> getKeyList() { final List<String> keys = new ArrayList<>(); final Iterator<String> it = keyIterator(); while (it.hasNext()) { keys.add(it.next()); } return keys; }
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Returns a list of all known keys including the deleted ones. @return List of keys.
[ "Returns", "a", "list", "of", "all", "known", "keys", "including", "the", "deleted", "ones", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L426-L433
145,340
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.keyIterator
public final Iterator<String> keyIterator() { return new Iterator<String>() { private final Iterator<Property> it = props.iterator(); @Override public boolean hasNext() { return it.hasNext(); } @Override public String next() { final Property prop = it.next(); return prop.getKey(); } @Override public void remove() { it.remove(); } }; }
java
public final Iterator<String> keyIterator() { return new Iterator<String>() { private final Iterator<Property> it = props.iterator(); @Override public boolean hasNext() { return it.hasNext(); } @Override public String next() { final Property prop = it.next(); return prop.getKey(); } @Override public void remove() { it.remove(); } }; }
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Returns a key iterator. @return Iterates over all keys including the deleted ones.
[ "Returns", "a", "key", "iterator", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L449-L469
145,341
fuinorg/utils4j
src/main/java/org/fuin/utils4j/PropertiesFile.java
PropertiesFile.toProperties
public final Properties toProperties() { final Properties retVal = new Properties(); for (int i = 0; i < props.size(); i++) { final Property prop = props.get(i); if (!prop.isDeleted()) { retVal.put(prop.getKey(), prop.getValue()); } } return retVal; }
java
public final Properties toProperties() { final Properties retVal = new Properties(); for (int i = 0; i < props.size(); i++) { final Property prop = props.get(i); if (!prop.isDeleted()) { retVal.put(prop.getKey(), prop.getValue()); } } return retVal; }
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Returns a copy of all properties. @return All key/values without deleted ones.
[ "Returns", "a", "copy", "of", "all", "properties", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/PropertiesFile.java#L476-L485
145,342
LevelFourAB/commons
commons-types/src/main/java/se/l4/commons/types/internal/ExtendedTypeBuilderImpl.java
ExtendedTypeBuilderImpl.resolveAndExtend
private static <CT, I> Function<CT, I> resolveAndExtend( Class<CT> contextType, List<MethodResolver<CT>> resolvers, Class<I> typeToExtend) { // Resolve generics ResolvedTypeWithMembers withMembers = Types.resolveMembers(typeToExtend); Map<Method, MethodInvocationHandler<CT>> handlers = new HashMap<>(); try { // Go through methods and create invokers for each of them for(ResolvedMethod method : withMembers.getMemberMethods()) { // Only try to implement abstract methods if(! method.isAbstract()) continue; // Create an encounter and let the first method resolver that matches handle the method boolean foundInvoker = false; MethodEncounter encounter = new MethodEncounterImpl(method); for(MethodResolver<CT> resolver : resolvers) { Optional<MethodInvocationHandler<CT>> opt = resolver.create(encounter); if(opt.isPresent()) { // This resolver created an invoker to use foundInvoker = true; handlers.put(method.getRawMember(), opt.get()); break; } } if(! foundInvoker) { // No invoker was found, can not handle the method throw new ProxyException("The method " + method.getName() + " could not be handled"); } } } catch(ProxyException e) { throw new ProxyException(typeToExtend.getName() + ":\n" + e.getMessage()); } catch(Exception e) { throw new ProxyException(typeToExtend.getName() + ":\n" + e.getMessage(), e); } return createFunction(contextType, typeToExtend, Collections.unmodifiableMap(handlers)); }
java
private static <CT, I> Function<CT, I> resolveAndExtend( Class<CT> contextType, List<MethodResolver<CT>> resolvers, Class<I> typeToExtend) { // Resolve generics ResolvedTypeWithMembers withMembers = Types.resolveMembers(typeToExtend); Map<Method, MethodInvocationHandler<CT>> handlers = new HashMap<>(); try { // Go through methods and create invokers for each of them for(ResolvedMethod method : withMembers.getMemberMethods()) { // Only try to implement abstract methods if(! method.isAbstract()) continue; // Create an encounter and let the first method resolver that matches handle the method boolean foundInvoker = false; MethodEncounter encounter = new MethodEncounterImpl(method); for(MethodResolver<CT> resolver : resolvers) { Optional<MethodInvocationHandler<CT>> opt = resolver.create(encounter); if(opt.isPresent()) { // This resolver created an invoker to use foundInvoker = true; handlers.put(method.getRawMember(), opt.get()); break; } } if(! foundInvoker) { // No invoker was found, can not handle the method throw new ProxyException("The method " + method.getName() + " could not be handled"); } } } catch(ProxyException e) { throw new ProxyException(typeToExtend.getName() + ":\n" + e.getMessage()); } catch(Exception e) { throw new ProxyException(typeToExtend.getName() + ":\n" + e.getMessage(), e); } return createFunction(contextType, typeToExtend, Collections.unmodifiableMap(handlers)); }
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Internal helper that resolves all the invokers using the given resolvers. @param contextType the type of context the invokers use @param resolvers list of resolvers @param typeToExtend interface or abstract class to extend
[ "Internal", "helper", "that", "resolves", "all", "the", "invokers", "using", "the", "given", "resolvers", "." ]
aa121b3a5504b43d0c10450a1b984694fcd2b8ee
https://github.com/LevelFourAB/commons/blob/aa121b3a5504b43d0c10450a1b984694fcd2b8ee/commons-types/src/main/java/se/l4/commons/types/internal/ExtendedTypeBuilderImpl.java#L85-L134
145,343
LevelFourAB/commons
commons-types/src/main/java/se/l4/commons/types/internal/ExtendedTypeBuilderImpl.java
ExtendedTypeBuilderImpl.createFunction
@SuppressWarnings({ "unchecked", "rawtypes" }) private static <CT, I> Function<CT, I> createFunction( Class<CT> contextType, Class<I> typeToExtend, Map<Method, MethodInvocationHandler<CT>> invokers ) { try { DynamicType.Builder builder = new ByteBuddy() .subclass(typeToExtend); // Add the context field builder = builder.defineField("context", contextType, Visibility.PRIVATE); // Add the constructor builder = builder.defineConstructor(Visibility.PUBLIC) .withParameter(contextType) .intercept( MethodCall.invoke(Object.class.getDeclaredConstructor()) .onSuper() .andThen(FieldAccessor.ofField("context").setsArgumentAt(0)) ); // TODO: The constructor needs to support abstract base classes and injection via InstanceFactory for(Map.Entry<Method, MethodInvocationHandler<CT>> e : invokers.entrySet()) { builder = builder.define(e.getKey()) .intercept( MethodDelegation.to(new Runner(e.getValue())) ); } Class createdClass = builder.make() .load(typeToExtend.getClassLoader()) .getLoaded(); return createFactory(createdClass, contextType); } catch(Throwable e) { if(e instanceof ProxyException) throw (ProxyException) e; throw new ProxyException(e); } }
java
@SuppressWarnings({ "unchecked", "rawtypes" }) private static <CT, I> Function<CT, I> createFunction( Class<CT> contextType, Class<I> typeToExtend, Map<Method, MethodInvocationHandler<CT>> invokers ) { try { DynamicType.Builder builder = new ByteBuddy() .subclass(typeToExtend); // Add the context field builder = builder.defineField("context", contextType, Visibility.PRIVATE); // Add the constructor builder = builder.defineConstructor(Visibility.PUBLIC) .withParameter(contextType) .intercept( MethodCall.invoke(Object.class.getDeclaredConstructor()) .onSuper() .andThen(FieldAccessor.ofField("context").setsArgumentAt(0)) ); // TODO: The constructor needs to support abstract base classes and injection via InstanceFactory for(Map.Entry<Method, MethodInvocationHandler<CT>> e : invokers.entrySet()) { builder = builder.define(e.getKey()) .intercept( MethodDelegation.to(new Runner(e.getValue())) ); } Class createdClass = builder.make() .load(typeToExtend.getClassLoader()) .getLoaded(); return createFactory(createdClass, contextType); } catch(Throwable e) { if(e instanceof ProxyException) throw (ProxyException) e; throw new ProxyException(e); } }
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Create the actual function that creates instances. @param contextType the context type being used @param typeToExtend the type being extended @param invokers the resolved invokers
[ "Create", "the", "actual", "function", "that", "creates", "instances", "." ]
aa121b3a5504b43d0c10450a1b984694fcd2b8ee
https://github.com/LevelFourAB/commons/blob/aa121b3a5504b43d0c10450a1b984694fcd2b8ee/commons-types/src/main/java/se/l4/commons/types/internal/ExtendedTypeBuilderImpl.java#L146-L191
145,344
fnklabs/draenei
src/main/java/com/fnklabs/draenei/orm/DataProvider.java
DataProvider.find
public List<V> find(Object... keys) { Timer timer = getMetrics().getTimer(MetricsType.DATA_PROVIDER_FIND.name()); List<Object> parameters = new ArrayList<>(); Collections.addAll(parameters, keys); List<V> resultFuture = fetch(parameters); timer.stop(); return resultFuture; }
java
public List<V> find(Object... keys) { Timer timer = getMetrics().getTimer(MetricsType.DATA_PROVIDER_FIND.name()); List<Object> parameters = new ArrayList<>(); Collections.addAll(parameters, keys); List<V> resultFuture = fetch(parameters); timer.stop(); return resultFuture; }
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Get records by specified keys and send result to consumer @param keys Primary keys @return True if result will be completed successfully and False if result will be completed with error
[ "Get", "records", "by", "specified", "keys", "and", "send", "result", "to", "consumer" ]
0a8cac54f1f635be3e2950375a23291d38453ae8
https://github.com/fnklabs/draenei/blob/0a8cac54f1f635be3e2950375a23291d38453ae8/src/main/java/com/fnklabs/draenei/orm/DataProvider.java#L274-L286
145,345
fnklabs/draenei
src/main/java/com/fnklabs/draenei/orm/DataProvider.java
DataProvider.monitorFuture
private <Input, Output> ListenableFuture<Output> monitorFuture(Timer timer, ListenableFuture<Input> listenableFuture, Function<Input, Output> userCallback) { Futures.addCallback(listenableFuture, new FutureTimerCallback<>(timer)); return Futures.transform(listenableFuture, new JdkFunctionWrapper<>(userCallback)); }
java
private <Input, Output> ListenableFuture<Output> monitorFuture(Timer timer, ListenableFuture<Input> listenableFuture, Function<Input, Output> userCallback) { Futures.addCallback(listenableFuture, new FutureTimerCallback<>(timer)); return Futures.transform(listenableFuture, new JdkFunctionWrapper<>(userCallback)); }
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Monitor future completion @param timer Timer that will be close on Future success or failure @param listenableFuture Listenable future @param userCallback User callback that will be executed on Future success @param <Input> Future class type @param <Output> User callback output @return Listenable future
[ "Monitor", "future", "completion" ]
0a8cac54f1f635be3e2950375a23291d38453ae8
https://github.com/fnklabs/draenei/blob/0a8cac54f1f635be3e2950375a23291d38453ae8/src/main/java/com/fnklabs/draenei/orm/DataProvider.java#L385-L389
145,346
fnklabs/draenei
src/main/java/com/fnklabs/draenei/orm/DataProvider.java
DataProvider.build
private EntityMetadata build(Class<V> clazz) throws MetadataException { return EntityMetadata.buildEntityMetadata(clazz, getCassandraClient()); }
java
private EntityMetadata build(Class<V> clazz) throws MetadataException { return EntityMetadata.buildEntityMetadata(clazz, getCassandraClient()); }
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Build entity metadata from entity class @param clazz Entity class @return EntityMetadata @throws MetadataException
[ "Build", "entity", "metadata", "from", "entity", "class" ]
0a8cac54f1f635be3e2950375a23291d38453ae8
https://github.com/fnklabs/draenei/blob/0a8cac54f1f635be3e2950375a23291d38453ae8/src/main/java/com/fnklabs/draenei/orm/DataProvider.java#L594-L596
145,347
fnklabs/draenei
src/main/java/com/fnklabs/draenei/orm/DataProvider.java
DataProvider.buildHashCode
final long buildHashCode(Object... keys) { ArrayList<Object> keyList = new ArrayList<>(); Collections.addAll(keyList, keys); return buildHashCode(keyList); }
java
final long buildHashCode(Object... keys) { ArrayList<Object> keyList = new ArrayList<>(); Collections.addAll(keyList, keys); return buildHashCode(keyList); }
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Build cache key @param keys Entity keys @return Cache key
[ "Build", "cache", "key" ]
0a8cac54f1f635be3e2950375a23291d38453ae8
https://github.com/fnklabs/draenei/blob/0a8cac54f1f635be3e2950375a23291d38453ae8/src/main/java/com/fnklabs/draenei/orm/DataProvider.java#L673-L679
145,348
dbracewell/mango
src/main/java/com/davidbracewell/conversion/Cast.java
Cast.as
@SuppressWarnings("unchecked") public static <T> T as(Object o) { return o == null ? null : (T) o; }
java
@SuppressWarnings("unchecked") public static <T> T as(Object o) { return o == null ? null : (T) o; }
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Casts an object in an unchecked manner. @param <T> the type parameter @param o the object @return the casted object or null if the object was null
[ "Casts", "an", "object", "in", "an", "unchecked", "manner", "." ]
2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/conversion/Cast.java#L51-L54
145,349
fuinorg/srcgen4javassist
src/main/java/org/fuin/srcgen4javassist/SgAnnotation.java
SgAnnotation.addArgument
public final void addArgument(final String name, final Object value) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } if (value == null) { throw new IllegalArgumentException("The argument 'value' cannot be null!"); } arguments.put(name.trim(), value); }
java
public final void addArgument(final String name, final Object value) { if (name == null) { throw new IllegalArgumentException("The argument 'name' cannot be null!"); } if (value == null) { throw new IllegalArgumentException("The argument 'value' cannot be null!"); } arguments.put(name.trim(), value); }
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Adds an argument. @param name Name of the argument - Cannot be null. @param value Value of the argument - Cannot be null.
[ "Adds", "an", "argument", "." ]
355828113cfce3cdd3d69ba242c5bdfc7d899f2f
https://github.com/fuinorg/srcgen4javassist/blob/355828113cfce3cdd3d69ba242c5bdfc7d899f2f/src/main/java/org/fuin/srcgen4javassist/SgAnnotation.java#L114-L122
145,350
dbracewell/mango
src/main/java/com/davidbracewell/reflection/BeanDescriptor.java
BeanDescriptor.createInstanceQuietly
public Object createInstanceQuietly() { try { return clazz.newInstance(); } catch (InstantiationException e) { log.finest(e); return null; } catch (IllegalAccessException e) { log.finest(e); return null; } }
java
public Object createInstanceQuietly() { try { return clazz.newInstance(); } catch (InstantiationException e) { log.finest(e); return null; } catch (IllegalAccessException e) { log.finest(e); return null; } }
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Constructs an instance of the wrapped class ignoring any errors. @return An instance of the class or <code>null</code> if something went wrong.
[ "Constructs", "an", "instance", "of", "the", "wrapped", "class", "ignoring", "any", "errors", "." ]
2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/reflection/BeanDescriptor.java#L203-L213
145,351
dbracewell/mango
src/main/java/com/davidbracewell/collection/Span.java
Span.overlaps
public boolean overlaps(Span other) { return other != null && this.start() < other.end() && this.end() > other.start(); }
java
public boolean overlaps(Span other) { return other != null && this.start() < other.end() && this.end() > other.start(); }
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Returns true if the bounds of other text are connected with the bounds of this text. @param other The other text to check if this one overlaps @return True if the two texts are in the same document and overlap, False otherwise
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2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/collection/Span.java#L72-L74
145,352
dbracewell/mango
src/main/java/com/davidbracewell/collection/Span.java
Span.encloses
public boolean encloses(Span other) { return other != null && other.start() >= this.start() && other.end() < this.end(); }
java
public boolean encloses(Span other) { return other != null && other.start() >= this.start() && other.end() < this.end(); }
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Returns true if the bounds of the other text do not extend outside the bounds of this text. @param other The other text to check if this one encloses @return True if the two texts are in the same document and this text encloses the other, False otherwise
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2cec08826f1fccd658694dd03abce10fc97618ec
https://github.com/dbracewell/mango/blob/2cec08826f1fccd658694dd03abce10fc97618ec/src/main/java/com/davidbracewell/collection/Span.java#L82-L84
145,353
devcon5io/common
cli/src/main/java/io/devcon5/cli/OptionCollector.java
OptionCollector.collectFrom
public Options collectFrom(Class type) { final Options opts = new Options(); collectOptions(type, opts); return opts; }
java
public Options collectFrom(Class type) { final Options opts = new Options(); collectOptions(type, opts); return opts; }
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Collects all Options for a given type. The collector traverses the type hierarchy and resolves Option groups. @param type the type to collect options from @return
[ "Collects", "all", "Options", "for", "a", "given", "type", ".", "The", "collector", "traverses", "the", "type", "hierarchy", "and", "resolves", "Option", "groups", "." ]
363688e0dc904d559682bf796bd6c836b4e0efc7
https://github.com/devcon5io/common/blob/363688e0dc904d559682bf796bd6c836b4e0efc7/cli/src/main/java/io/devcon5/cli/OptionCollector.java#L43-L47
145,354
duraspace/fcrepo-cloudsync
fcrepo-cloudsync-service/src/main/java/org/duraspace/fcrepo/cloudsync/service/backend/FilesystemConnector.java
FilesystemConnector.decode
static String[] decode(String filename) { int i = filename.indexOf("+"); if (i == -1) return new String[] { decodePart(filename), null, null }; int j = filename.lastIndexOf("+"); return new String[] { decodePart(filename.substring(0, i)), decodePart(filename.substring(i + 1, j)), decodePart(filename.substring(j + 1)) }; }
java
static String[] decode(String filename) { int i = filename.indexOf("+"); if (i == -1) return new String[] { decodePart(filename), null, null }; int j = filename.lastIndexOf("+"); return new String[] { decodePart(filename.substring(0, i)), decodePart(filename.substring(i + 1, j)), decodePart(filename.substring(j + 1)) }; }
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reverses the encoding
[ "reverses", "the", "encoding" ]
2d90e2c9c84a827f2605607ff40e116c67eff9b9
https://github.com/duraspace/fcrepo-cloudsync/blob/2d90e2c9c84a827f2605607ff40e116c67eff9b9/fcrepo-cloudsync-service/src/main/java/org/duraspace/fcrepo/cloudsync/service/backend/FilesystemConnector.java#L234-L241
145,355
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.sum
public static double sum (double[] vector) { // Declare and initialize the accumulator: double total = 0.0; // Iterate over the vector: for (int i = 0; i < vector.length; i++) { total += vector[i]; } // Done, return: return total; }
java
public static double sum (double[] vector) { // Declare and initialize the accumulator: double total = 0.0; // Iterate over the vector: for (int i = 0; i < vector.length; i++) { total += vector[i]; } // Done, return: return total; }
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Returns the sum of the vector. @param vector The input vector as a double array @return The sum of the vector
[ "Returns", "the", "sum", "of", "the", "vector", "." ]
a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L44-L55
145,356
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.sumOfAbsolutes
public static double sumOfAbsolutes (double[] vector) { // Declare and initialize the accumulator: double total = 0.0; // Iterate over the vector: for (int i = 0; i < vector.length; i++) { total += Math.abs(vector[i]); } // Done, return: return total; }
java
public static double sumOfAbsolutes (double[] vector) { // Declare and initialize the accumulator: double total = 0.0; // Iterate over the vector: for (int i = 0; i < vector.length; i++) { total += Math.abs(vector[i]); } // Done, return: return total; }
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Returns the sum of the absolute values in the vector. @param vector The input vector as a double array @return The sum of the absolute values in the vector
[ "Returns", "the", "sum", "of", "the", "absolute", "values", "in", "the", "vector", "." ]
a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L63-L74
145,357
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.median
public static double median (double[] vector) { final double[] sorted = vector.clone(); Arrays.sort(sorted); if (vector.length % 2 == 1) { return sorted[vector.length / 2]; } return (sorted[vector.length / 2 - 1] + sorted[vector.length / 2]) / 2; }
java
public static double median (double[] vector) { final double[] sorted = vector.clone(); Arrays.sort(sorted); if (vector.length % 2 == 1) { return sorted[vector.length / 2]; } return (sorted[vector.length / 2 - 1] + sorted[vector.length / 2]) / 2; }
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Returns the median of the vector. @param vector The input vector as a double array @return The median of the vector
[ "Returns", "the", "median", "of", "the", "vector", "." ]
a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L92-L99
145,358
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.sequence
public static double[] sequence (double start, double end, int length) { // Declare and initialize the return value: double[] retval = new double[length]; // Calculate step: double step = (end - start) / (length == 1 ? 1 : length - 1); // Iterate and fill: for (int i = 0; i < length; i++) { retval[i] = start + (i * step); } // Done, return; return retval; }
java
public static double[] sequence (double start, double end, int length) { // Declare and initialize the return value: double[] retval = new double[length]; // Calculate step: double step = (end - start) / (length == 1 ? 1 : length - 1); // Iterate and fill: for (int i = 0; i < length; i++) { retval[i] = start + (i * step); } // Done, return; return retval; }
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Generates a sequence of specified length from specified start to specified end. @param start The number to start with. @param end The number to end with. @param length The length of the desired sequence. @return A sequence of length {@code length} starting with {@code start} and ending with {@code end}.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L109-L123
145,359
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.getOrder
public static int[] getOrder(double[] values, boolean descending) { return DMatrixUtils.getOrder(values, IntStream.range(0, values.length).toArray(), descending); }
java
public static int[] getOrder(double[] values, boolean descending) { return DMatrixUtils.getOrder(values, IntStream.range(0, values.length).toArray(), descending); }
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Get the order of the elements in descending or ascending order. @param values A vector of double values. @param descending Flag indicating if we go descending or not. @return A vector of indices sorted in the provided order.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L242-L244
145,360
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.getOrder
public static int[] getOrder(int[] values, int[] indices, boolean descending) { // Create an index series: Integer[] opIndices = ArrayUtils.toObject(indices); // Sort indices: Arrays.sort(opIndices, new Comparator<Integer>() { @Override public int compare(Integer o1, Integer o2) { if (descending) { return Double.compare(values[o2], values[o1]); } else { return Double.compare(values[o1], values[o2]); } } }); return ArrayUtils.toPrimitive(opIndices); }
java
public static int[] getOrder(int[] values, int[] indices, boolean descending) { // Create an index series: Integer[] opIndices = ArrayUtils.toObject(indices); // Sort indices: Arrays.sort(opIndices, new Comparator<Integer>() { @Override public int compare(Integer o1, Integer o2) { if (descending) { return Double.compare(values[o2], values[o1]); } else { return Double.compare(values[o1], values[o2]); } } }); return ArrayUtils.toPrimitive(opIndices); }
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Get the order of the specified elements in descending or ascending order. @param values A vector of integer values. @param indices The indices which will be considered for ordering. @param descending Flag indicating if we go descending or not. @return A vector of indices sorted in the provided order.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L264-L281
145,361
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.roundDownTo
public static BigDecimal roundDownTo(double value, double steps) { final BigDecimal bValue = BigDecimal.valueOf(value); final BigDecimal bSteps = BigDecimal.valueOf(steps); if (Objects.equals(bSteps, BigDecimal.ZERO)) { return bValue; } else { return bValue.divide(bSteps, 0, RoundingMode.FLOOR).multiply(bSteps); } }
java
public static BigDecimal roundDownTo(double value, double steps) { final BigDecimal bValue = BigDecimal.valueOf(value); final BigDecimal bSteps = BigDecimal.valueOf(steps); if (Objects.equals(bSteps, BigDecimal.ZERO)) { return bValue; } else { return bValue.divide(bSteps, 0, RoundingMode.FLOOR).multiply(bSteps); } }
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Returns the DOWN rounded value of the given value for the given steps. @param value The original value to be rounded. @param steps The steps. @return The DOWN rounded value of the given value for the given steps.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L311-L320
145,362
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.roundUpTo
public static BigDecimal roundUpTo(double value, double steps) { final BigDecimal bValue = BigDecimal.valueOf(value); final BigDecimal bSteps = BigDecimal.valueOf(steps); if (Objects.equals(bSteps, BigDecimal.ZERO)) { return bValue; } else { return bValue.divide(bSteps, 0, RoundingMode.CEILING).multiply(bSteps); } }
java
public static BigDecimal roundUpTo(double value, double steps) { final BigDecimal bValue = BigDecimal.valueOf(value); final BigDecimal bSteps = BigDecimal.valueOf(steps); if (Objects.equals(bSteps, BigDecimal.ZERO)) { return bValue; } else { return bValue.divide(bSteps, 0, RoundingMode.CEILING).multiply(bSteps); } }
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Returns the UP rounded value of the given value for the given steps. @param value The original value to be rounded. @param steps The steps. @return The UP rounded value of the given value for the given steps.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L329-L338
145,363
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.roundToClosest
public static BigDecimal roundToClosest(double value, double steps) { final BigDecimal down = DMatrixUtils.roundDownTo(value, steps); final BigDecimal up = DMatrixUtils.roundUpTo(value, steps); final BigDecimal orig = new BigDecimal(String.valueOf(value)); if (orig.subtract(down).abs().compareTo(orig.subtract(up).abs()) < 0) { return down; } return up; }
java
public static BigDecimal roundToClosest(double value, double steps) { final BigDecimal down = DMatrixUtils.roundDownTo(value, steps); final BigDecimal up = DMatrixUtils.roundUpTo(value, steps); final BigDecimal orig = new BigDecimal(String.valueOf(value)); if (orig.subtract(down).abs().compareTo(orig.subtract(up).abs()) < 0) { return down; } return up; }
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Returns the closest rounded value of the given value for the given steps. @param value The original value to be rounded. @param steps The steps. @return The closest rounded value of the given value for the given steps.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L347-L355
145,364
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.matrixFromRange
public static double[][] matrixFromRange (double[] lower, double[] upper, int rows) { // Get the number of columns: final int cols = lower.length; // Initialize the return value: final double[][] matrix = new double[rows][cols]; // Iterate over columns and fill the array: for (int col = 0; col < cols; col++) { // Get the sequence: final double[] sequence = DMatrixUtils.sequence(lower[col], upper[col], rows); // Assign to each row in the column: for (int row = 0; row < sequence.length; row++) { matrix[row][col] = sequence[row]; } } // Done, return the populated matrix: return matrix; }
java
public static double[][] matrixFromRange (double[] lower, double[] upper, int rows) { // Get the number of columns: final int cols = lower.length; // Initialize the return value: final double[][] matrix = new double[rows][cols]; // Iterate over columns and fill the array: for (int col = 0; col < cols; col++) { // Get the sequence: final double[] sequence = DMatrixUtils.sequence(lower[col], upper[col], rows); // Assign to each row in the column: for (int row = 0; row < sequence.length; row++) { matrix[row][col] = sequence[row]; } } // Done, return the populated matrix: return matrix; }
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Creates a matrix from the provided range for columns with the given number of rows. @param lower The lower bound (inclusive) for the range. @param upper The upper bound (exclusive) for the range. @param rows The number of rows. @return A new matrix.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L399-L419
145,365
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.cumsum
public static double[] cumsum (double[] vector) { // Initialize the return value: final double[] retval = new double[vector.length]; // Iterate and cumulate: retval[0] = vector[0]; for (int i = 1; i < retval.length; i++) { retval[i] = vector[i] + retval[i - 1]; } // Done, return: return retval; }
java
public static double[] cumsum (double[] vector) { // Initialize the return value: final double[] retval = new double[vector.length]; // Iterate and cumulate: retval[0] = vector[0]; for (int i = 1; i < retval.length; i++) { retval[i] = vector[i] + retval[i - 1]; } // Done, return: return retval; }
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Computes the cumulative sums of a given vector. @param vector Vector which the cumulative sums to be computed of. @return Cumulative sums of the vector.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L427-L439
145,366
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.shuffleIndices
public static int[] shuffleIndices (int length, RandomGenerator randomGenerator) { // Initialize indices: final int[] indices = IntStream.range(0, length).toArray(); // Shuffle the array: MathArrays.shuffle(indices, randomGenerator); // Done return shuffled indices: return indices; }
java
public static int[] shuffleIndices (int length, RandomGenerator randomGenerator) { // Initialize indices: final int[] indices = IntStream.range(0, length).toArray(); // Shuffle the array: MathArrays.shuffle(indices, randomGenerator); // Done return shuffled indices: return indices; }
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Consumes the length of an array and returns its shuffled indices. @param length The length of the arrays of which indices to be shuffled. @param randomGenerator Random number generator. @return Shuffled indices.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L665-L674
145,367
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.applyIndices
public static double[] applyIndices (double[] vector, int[] indices) { // Initialize the return array: final double[] retval = new double[indices.length]; // Iterate over indices and populate: for (int i = 0; i < retval.length; i++) { retval[i] = vector[indices[i]]; } // Done, return the return value: return retval; }
java
public static double[] applyIndices (double[] vector, int[] indices) { // Initialize the return array: final double[] retval = new double[indices.length]; // Iterate over indices and populate: for (int i = 0; i < retval.length; i++) { retval[i] = vector[indices[i]]; } // Done, return the return value: return retval; }
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Consumes an array and desired respective indices in an array and return a new array with values from the desired indices. @param vector Values. @param indices Desired indices for order. @return A new array.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L683-L694
145,368
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.pairwiseMin
public static double[] pairwiseMin (double[] vector1, double[] vector2) { // Initialize the return value: final double[] retval = new double[vector1.length]; // Iterate over values and get mins: for (int i = 0; i < retval.length; i++) { retval[i] = Math.min(vector1[i], vector2[i]); } // Done, return: return retval; }
java
public static double[] pairwiseMin (double[] vector1, double[] vector2) { // Initialize the return value: final double[] retval = new double[vector1.length]; // Iterate over values and get mins: for (int i = 0; i < retval.length; i++) { retval[i] = Math.min(vector1[i], vector2[i]); } // Done, return: return retval; }
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Computes a vector as the min of respective pairs from two arrays. @param vector1 The first vector. @param vector2 The second vector. @return Mins of two vectors.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L740-L751
145,369
vst/commons-math-extensions
src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java
DMatrixUtils.pairwiseMax
public static double[] pairwiseMax (double[] vector1, double[] vector2) { // Initialize the return value: final double[] retval = new double[vector1.length]; // Iterate over values and get maxs: for (int i = 0; i < retval.length; i++) { retval[i] = Math.max(vector1[i], vector2[i]); } // Done, return: return retval; }
java
public static double[] pairwiseMax (double[] vector1, double[] vector2) { // Initialize the return value: final double[] retval = new double[vector1.length]; // Iterate over values and get maxs: for (int i = 0; i < retval.length; i++) { retval[i] = Math.max(vector1[i], vector2[i]); } // Done, return: return retval; }
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Computes a vector as the max of respective pairs from two arrays. @param vector1 The first vector. @param vector2 The second vector. @return Maxs of two vectors.
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a11ee78ffe53ab7c016062be93c5af07aa8e1823
https://github.com/vst/commons-math-extensions/blob/a11ee78ffe53ab7c016062be93c5af07aa8e1823/src/main/java/com/vsthost/rnd/commons/math/ext/linear/DMatrixUtils.java#L760-L771
145,370
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.observe
public TableFactor observe(int variable, final int value) { return marginalize(variable, 0, (marginalizedVariableValue, assignment) -> { if (marginalizedVariableValue == value) { return (old, n) -> { // This would mean that we're observing something with 0 probability, which will wonk up downstream // stuff // assert(n != 0); assert !Double.isNaN(n); return n; }; } else { return (old, n) -> { assert !Double.isNaN(old); return old; }; } }); }
java
public TableFactor observe(int variable, final int value) { return marginalize(variable, 0, (marginalizedVariableValue, assignment) -> { if (marginalizedVariableValue == value) { return (old, n) -> { // This would mean that we're observing something with 0 probability, which will wonk up downstream // stuff // assert(n != 0); assert !Double.isNaN(n); return n; }; } else { return (old, n) -> { assert !Double.isNaN(old); return old; }; } }); }
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Remove a variable by observing it at a certain value, return a new factor without that variable. @param variable the variable to be observed @param value the value the variable takes when observed @return a new factor with 'variable' in it
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L119-L136
145,371
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.getMaxedMarginals
public double[][] getMaxedMarginals() { double[][] maxValues = new double[neighborIndices.length][]; for (int i = 0; i < neighborIndices.length; i++) { maxValues[i] = new double[getDimensions()[i]]; for (int j = 0; j < maxValues[i].length; j++) maxValues[i][j] = Double.NEGATIVE_INFINITY; } // Get max values // OPTIMIZATION: // Rather than use the standard iterator, which creates lots of int[] arrays on the heap, which need to be GC'd, // we use the fast version that just mutates one array. Since this is read once for us here, this is ideal. Iterator<int[]> fastPassByReferenceIterator = fastPassByReferenceIterator(); int[] assignment = fastPassByReferenceIterator.next(); while (true) { double v = getAssignmentLogValue(assignment); for (int i = 0; i < neighborIndices.length; i++) { if (maxValues[i][assignment[i]] < v) maxValues[i][assignment[i]] = v; } // This mutates the resultAssignment[] array, rather than creating a new one if (fastPassByReferenceIterator.hasNext()) { fastPassByReferenceIterator.next(); } else break; } for (int i = 0; i < neighborIndices.length; i++) { normalizeLogArr(maxValues[i]); } return maxValues; }
java
public double[][] getMaxedMarginals() { double[][] maxValues = new double[neighborIndices.length][]; for (int i = 0; i < neighborIndices.length; i++) { maxValues[i] = new double[getDimensions()[i]]; for (int j = 0; j < maxValues[i].length; j++) maxValues[i][j] = Double.NEGATIVE_INFINITY; } // Get max values // OPTIMIZATION: // Rather than use the standard iterator, which creates lots of int[] arrays on the heap, which need to be GC'd, // we use the fast version that just mutates one array. Since this is read once for us here, this is ideal. Iterator<int[]> fastPassByReferenceIterator = fastPassByReferenceIterator(); int[] assignment = fastPassByReferenceIterator.next(); while (true) { double v = getAssignmentLogValue(assignment); for (int i = 0; i < neighborIndices.length; i++) { if (maxValues[i][assignment[i]] < v) maxValues[i][assignment[i]] = v; } // This mutates the resultAssignment[] array, rather than creating a new one if (fastPassByReferenceIterator.hasNext()) { fastPassByReferenceIterator.next(); } else break; } for (int i = 0; i < neighborIndices.length; i++) { normalizeLogArr(maxValues[i]); } return maxValues; }
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Convenience function to max out all but one variable, and return the marginal array. @return an array of doubles one-to-one with variable states for each variable
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L229-L260
145,372
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.maxOut
public TableFactor maxOut(int variable) { return marginalize(variable, Double.NEGATIVE_INFINITY, (marginalizedVariableValue, assignment) -> Math::max); }
java
public TableFactor maxOut(int variable) { return marginalize(variable, Double.NEGATIVE_INFINITY, (marginalizedVariableValue, assignment) -> Math::max); }
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Marginalize out a variable by taking the max value. @param variable the variable to be maxed out. @return a table factor that will contain the largest value of the variable being marginalized out.
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L268-L270
145,373
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.getBestAssignment
public int[] getBestAssignment() { double maxValue = Double.NEGATIVE_INFINITY; for (int i = 0; i < values.length; i++) if (values[i] > maxValue) { maxValue = values[i]; } // OPTIMIZATION: // Rather than use the standard iterator, which creates lots of int[] arrays on the heap, which need to be GC'd, // we use the fast version that just mutates one array. Since this is read once for us here, this is ideal. Iterator<int[]> fastPassByReferenceIterator = fastPassByReferenceIterator(); do { int[] assignment = fastPassByReferenceIterator.next(); double v = getAssignmentLogValue(assignment); if (v == maxValue) return assignment; } while (fastPassByReferenceIterator.hasNext()); throw new IllegalStateException("This is unreachable."); }
java
public int[] getBestAssignment() { double maxValue = Double.NEGATIVE_INFINITY; for (int i = 0; i < values.length; i++) if (values[i] > maxValue) { maxValue = values[i]; } // OPTIMIZATION: // Rather than use the standard iterator, which creates lots of int[] arrays on the heap, which need to be GC'd, // we use the fast version that just mutates one array. Since this is read once for us here, this is ideal. Iterator<int[]> fastPassByReferenceIterator = fastPassByReferenceIterator(); do { int[] assignment = fastPassByReferenceIterator.next(); double v = getAssignmentLogValue(assignment); if (v == maxValue) return assignment; } while (fastPassByReferenceIterator.hasNext()); throw new IllegalStateException("This is unreachable."); }
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Returns the highest value assignment to this TableFactor @return an array of variable assignments, corresponding to the variables listed in neighborIndices, that has the highest value
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L277-L295
145,374
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.valueSum
public double valueSum() { // We want the exp(log-sum-exp), for stability // This rearranges to exp(a)*(sum-exp) double max = 0.0; for (int[] assignment : this) { double v = getAssignmentLogValue(assignment); if (v > max) { max = v; } } double sumExp = 0.0; for (int[] assignment : this) { double assigmentLogValue = getAssignmentLogValue(assignment); assert !Double.isNaN(assigmentLogValue); sumExp += Math.exp(getAssignmentLogValue(assignment) - max); } assert !Double.isNaN(sumExp); assert !Double.isNaN(max); return sumExp * Math.exp(max); }
java
public double valueSum() { // We want the exp(log-sum-exp), for stability // This rearranges to exp(a)*(sum-exp) double max = 0.0; for (int[] assignment : this) { double v = getAssignmentLogValue(assignment); if (v > max) { max = v; } } double sumExp = 0.0; for (int[] assignment : this) { double assigmentLogValue = getAssignmentLogValue(assignment); assert !Double.isNaN(assigmentLogValue); sumExp += Math.exp(getAssignmentLogValue(assignment) - max); } assert !Double.isNaN(sumExp); assert !Double.isNaN(max); return sumExp * Math.exp(max); }
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This is useful for calculating the partition function, and is exposed here because when implemented internally we can do a much more numerically stable summation. @return the sum of all values for all assignments to the TableFactor
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L563-L586
145,375
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.marginalize
private TableFactor marginalize(int variable, double startingValue, BiFunction<Integer, int[], BiFunction<Double, Double, Double>> curriedFoldr) { // Can't marginalize the last variable assert (getDimensions().length > 1); // Calculate the result domain List<Integer> resultDomain = new ArrayList<>(); for (int n : neighborIndices) { if (n != variable) { resultDomain.add(n); } } // Create result TableFactor int[] resultNeighborIndices = new int[resultDomain.size()]; int[] resultDimensions = new int[resultNeighborIndices.length]; for (int i = 0; i < resultDomain.size(); i++) { int var = resultDomain.get(i); resultNeighborIndices[i] = var; resultDimensions[i] = getVariableSize(var); } TableFactor result = new TableFactor(resultNeighborIndices, resultDimensions); // Calculate forward-pointers from the old domain to new domain int[] mapping = new int[neighborIndices.length]; for (int i = 0; i < neighborIndices.length; i++) { mapping[i] = resultDomain.indexOf(neighborIndices[i]); } // Initialize for (int[] assignment : result) { result.setAssignmentLogValue(assignment, startingValue); } // Do the actual fold into the result int[] resultAssignment = new int[result.neighborIndices.length]; int marginalizedVariableValue = 0; // OPTIMIZATION: // Rather than use the standard iterator, which creates lots of int[] arrays on the heap, which need to be GC'd, // we use the fast version that just mutates one array. Since this is read once for us here, this is ideal. Iterator<int[]> fastPassByReferenceIterator = fastPassByReferenceIterator(); int[] assignment = fastPassByReferenceIterator.next(); while (true) { // Set the assignment arrays correctly for (int i = 0; i < assignment.length; i++) { if (mapping[i] != -1) resultAssignment[mapping[i]] = assignment[i]; else marginalizedVariableValue = assignment[i]; } double value = curriedFoldr.apply(marginalizedVariableValue, resultAssignment) .apply(result.getAssignmentLogValue(resultAssignment), getAssignmentLogValue(assignment)); assert(!Double.isNaN(value)); result.setAssignmentLogValue(resultAssignment, value); if (fastPassByReferenceIterator.hasNext()) fastPassByReferenceIterator.next(); else break; } return result; }
java
private TableFactor marginalize(int variable, double startingValue, BiFunction<Integer, int[], BiFunction<Double, Double, Double>> curriedFoldr) { // Can't marginalize the last variable assert (getDimensions().length > 1); // Calculate the result domain List<Integer> resultDomain = new ArrayList<>(); for (int n : neighborIndices) { if (n != variable) { resultDomain.add(n); } } // Create result TableFactor int[] resultNeighborIndices = new int[resultDomain.size()]; int[] resultDimensions = new int[resultNeighborIndices.length]; for (int i = 0; i < resultDomain.size(); i++) { int var = resultDomain.get(i); resultNeighborIndices[i] = var; resultDimensions[i] = getVariableSize(var); } TableFactor result = new TableFactor(resultNeighborIndices, resultDimensions); // Calculate forward-pointers from the old domain to new domain int[] mapping = new int[neighborIndices.length]; for (int i = 0; i < neighborIndices.length; i++) { mapping[i] = resultDomain.indexOf(neighborIndices[i]); } // Initialize for (int[] assignment : result) { result.setAssignmentLogValue(assignment, startingValue); } // Do the actual fold into the result int[] resultAssignment = new int[result.neighborIndices.length]; int marginalizedVariableValue = 0; // OPTIMIZATION: // Rather than use the standard iterator, which creates lots of int[] arrays on the heap, which need to be GC'd, // we use the fast version that just mutates one array. Since this is read once for us here, this is ideal. Iterator<int[]> fastPassByReferenceIterator = fastPassByReferenceIterator(); int[] assignment = fastPassByReferenceIterator.next(); while (true) { // Set the assignment arrays correctly for (int i = 0; i < assignment.length; i++) { if (mapping[i] != -1) resultAssignment[mapping[i]] = assignment[i]; else marginalizedVariableValue = assignment[i]; } double value = curriedFoldr.apply(marginalizedVariableValue, resultAssignment) .apply(result.getAssignmentLogValue(resultAssignment), getAssignmentLogValue(assignment)); assert(!Double.isNaN(value)); result.setAssignmentLogValue(resultAssignment, value); if (fastPassByReferenceIterator.hasNext()) fastPassByReferenceIterator.next(); else break; } return result; }
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Marginalizes out a variable by applying an associative join operation for each possible assignment to the marginalized variable. @param variable the variable (by 'name', not offset into neighborIndices) @param startingValue associativeJoin is basically a foldr over a table, and this is the initialization @param curriedFoldr the associative function to use when applying the join operation, taking first the assignment to the value being marginalized, and then a foldr operation @return a new TableFactor that doesn't contain 'variable', where values were gotten through associative marginalization.
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L637-L699
145,376
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.getVariableSize
private int getVariableSize(int variable) { for (int i = 0; i < neighborIndices.length; i++) { if (neighborIndices[i] == variable) return getDimensions()[i]; } return 0; }
java
private int getVariableSize(int variable) { for (int i = 0; i < neighborIndices.length; i++) { if (neighborIndices[i] == variable) return getDimensions()[i]; } return 0; }
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Address a variable by index to get it's size. Basically just a convenience function. @param variable the name, not index into neighbors, of the variable in question @return the size of the factor along this dimension
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fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L707-L712
145,377
keenon/loglinear
src/main/java/com/github/keenon/loglinear/inference/TableFactor.java
TableFactor.normalizeLogArr
private void normalizeLogArr(double[] arr) { // Find the log-scale normalization value double max = Double.NEGATIVE_INFINITY; for (double d : arr) { if (d > max) max = d; } double expSum = 0.0; for (double d : arr) { expSum += Math.exp(d - max); } double logSumExp = max + Math.log(expSum); if (Double.isInfinite(logSumExp)) { // Just put in uniform probabilities if we are normalizing all 0s for (int i = 0; i < arr.length; i++) { arr[i] = 1.0 / arr.length; } } else { // Normalize in log-scale before exponentiation, to help with stability for (int i = 0; i < arr.length; i++) { arr[i] = Math.exp(arr[i] - logSumExp); } } }
java
private void normalizeLogArr(double[] arr) { // Find the log-scale normalization value double max = Double.NEGATIVE_INFINITY; for (double d : arr) { if (d > max) max = d; } double expSum = 0.0; for (double d : arr) { expSum += Math.exp(d - max); } double logSumExp = max + Math.log(expSum); if (Double.isInfinite(logSumExp)) { // Just put in uniform probabilities if we are normalizing all 0s for (int i = 0; i < arr.length; i++) { arr[i] = 1.0 / arr.length; } } else { // Normalize in log-scale before exponentiation, to help with stability for (int i = 0; i < arr.length; i++) { arr[i] = Math.exp(arr[i] - logSumExp); } } }
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Super basic in-place array normalization @param arr the array to normalize
[ "Super", "basic", "in", "-", "place", "array", "normalization" ]
fa0c370ab6782015412f676ef2ab11c97be58e29
https://github.com/keenon/loglinear/blob/fa0c370ab6782015412f676ef2ab11c97be58e29/src/main/java/com/github/keenon/loglinear/inference/TableFactor.java#L719-L742
145,378
triceo/splitlog
splitlog-core/src/main/java/com/github/triceo/splitlog/MessageStore.java
MessageStore.add
public synchronized int add(final Message msg) { final int nextKey = this.getNextPosition(); this.store.put(nextKey, msg); MessageStore.LOGGER.info("Message #{} stored on position #{}", msg.getUniqueId(), nextKey); this.nextMessagePosition.incrementAndGet(); if (this.store.size() > this.messageLimit) { // discard first message if we're over limit this.store.remove(this.store.firstKey()); } return nextKey; }
java
public synchronized int add(final Message msg) { final int nextKey = this.getNextPosition(); this.store.put(nextKey, msg); MessageStore.LOGGER.info("Message #{} stored on position #{}", msg.getUniqueId(), nextKey); this.nextMessagePosition.incrementAndGet(); if (this.store.size() > this.messageLimit) { // discard first message if we're over limit this.store.remove(this.store.firstKey()); } return nextKey; }
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Add message to the storage. Every call will change values returned by {@link #getNextPosition()} and {@link #getLatestPosition()}. Any call may change value returned by {@link #getFirstPosition()}, which will happen if a message is discarded due to hitting the message store capacity. @param msg Message in question. @return Position of the message.
[ "Add", "message", "to", "the", "storage", "." ]
4e1b188e8c814119f5cf7343bbc53917843d68a2
https://github.com/triceo/splitlog/blob/4e1b188e8c814119f5cf7343bbc53917843d68a2/splitlog-core/src/main/java/com/github/triceo/splitlog/MessageStore.java#L62-L72
145,379
triceo/splitlog
splitlog-core/src/main/java/com/github/triceo/splitlog/MessageStore.java
MessageStore.getAll
public Collection<Message> getAll() { final int firstMessagePosition = this.getFirstPosition(); if (firstMessagePosition < MessageStore.INITIAL_MESSAGE_POSITION) { return Collections.unmodifiableList(Collections.emptyList()); } return this.getFrom(firstMessagePosition); }
java
public Collection<Message> getAll() { final int firstMessagePosition = this.getFirstPosition(); if (firstMessagePosition < MessageStore.INITIAL_MESSAGE_POSITION) { return Collections.unmodifiableList(Collections.emptyList()); } return this.getFrom(firstMessagePosition); }
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Return all messages currently present. @return Unmodifiable list containing those messages.
[ "Return", "all", "messages", "currently", "present", "." ]
4e1b188e8c814119f5cf7343bbc53917843d68a2
https://github.com/triceo/splitlog/blob/4e1b188e8c814119f5cf7343bbc53917843d68a2/splitlog-core/src/main/java/com/github/triceo/splitlog/MessageStore.java#L127-L133
145,380
triceo/splitlog
splitlog-core/src/main/java/com/github/triceo/splitlog/MessageStore.java
MessageStore.getFromRange
public synchronized List<Message> getFromRange(final int startPosition, final int endPosition) { // cache this here, so all parts of the method operate on the same data final int firstMessageId = this.getFirstPosition(); // input validation if ((startPosition < MessageStore.INITIAL_MESSAGE_POSITION) || (endPosition < MessageStore.INITIAL_MESSAGE_POSITION)) { throw new IllegalArgumentException("Message position cannot be negative."); } else if ((firstMessageId >= MessageStore.INITIAL_MESSAGE_POSITION) && (startPosition < firstMessageId)) { throw new IllegalArgumentException("Message at position " + startPosition + " had already been discarded. First available message position is " + firstMessageId + "."); } else if (endPosition <= startPosition) { throw new IllegalArgumentException("Ending position must be larger than starting message position."); } else if (endPosition > this.getNextPosition()) { throw new IllegalArgumentException("Range end cannot be greater than the next message position."); } // and properly synchronized range retrieval return Collections.unmodifiableList(new LinkedList<>(this.store.subMap(startPosition, endPosition) .values())); }
java
public synchronized List<Message> getFromRange(final int startPosition, final int endPosition) { // cache this here, so all parts of the method operate on the same data final int firstMessageId = this.getFirstPosition(); // input validation if ((startPosition < MessageStore.INITIAL_MESSAGE_POSITION) || (endPosition < MessageStore.INITIAL_MESSAGE_POSITION)) { throw new IllegalArgumentException("Message position cannot be negative."); } else if ((firstMessageId >= MessageStore.INITIAL_MESSAGE_POSITION) && (startPosition < firstMessageId)) { throw new IllegalArgumentException("Message at position " + startPosition + " had already been discarded. First available message position is " + firstMessageId + "."); } else if (endPosition <= startPosition) { throw new IllegalArgumentException("Ending position must be larger than starting message position."); } else if (endPosition > this.getNextPosition()) { throw new IllegalArgumentException("Range end cannot be greater than the next message position."); } // and properly synchronized range retrieval return Collections.unmodifiableList(new LinkedList<>(this.store.subMap(startPosition, endPosition) .values())); }
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Return all messages on positions in the given range. @param startPosition Least position, inclusive. @param endPosition Greatest position, exclusive. @return Unmodifiable list containing those messages.
[ "Return", "all", "messages", "on", "positions", "in", "the", "given", "range", "." ]
4e1b188e8c814119f5cf7343bbc53917843d68a2
https://github.com/triceo/splitlog/blob/4e1b188e8c814119f5cf7343bbc53917843d68a2/splitlog-core/src/main/java/com/github/triceo/splitlog/MessageStore.java#L169-L187
145,381
jbundle/webapp
base/src/main/java/org/jbundle/util/webapp/base/BaseOsgiServlet.java
BaseOsgiServlet.fixPathInfo
public String fixPathInfo(String path) { if (path == null) return null; if (path.startsWith("/")) path = path.substring(1); // Resources already start from root/baseURL if (baseURL == null) if (properties != null) if (this.getProperty(BASE_PATH) != null) path = this.getProperty(BASE_PATH) + path; return path; }
java
public String fixPathInfo(String path) { if (path == null) return null; if (path.startsWith("/")) path = path.substring(1); // Resources already start from root/baseURL if (baseURL == null) if (properties != null) if (this.getProperty(BASE_PATH) != null) path = this.getProperty(BASE_PATH) + path; return path; }
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Get the file path from the request. @param request @return
[ "Get", "the", "file", "path", "from", "the", "request", "." ]
af2cf32bd92254073052f1f9b4bcd47c2f76ba7d
https://github.com/jbundle/webapp/blob/af2cf32bd92254073052f1f9b4bcd47c2f76ba7d/base/src/main/java/org/jbundle/util/webapp/base/BaseOsgiServlet.java#L128-L139
145,382
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.getPackagePath
public static String getPackagePath(final Class<?> clasz) { checkNotNull("clasz", clasz); return clasz.getPackage().getName().replace('.', '/'); }
java
public static String getPackagePath(final Class<?> clasz) { checkNotNull("clasz", clasz); return clasz.getPackage().getName().replace('.', '/'); }
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Returns the package path of a class. @param clasz Class to determine the path for - Cannot be <code>null</code>. @return Package path for the class.
[ "Returns", "the", "package", "path", "of", "a", "class", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L118-L121
145,383
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.getResource
public static URL getResource(final Class<?> clasz, final String name) { checkNotNull("clasz", clasz); checkNotNull("name", name); final String nameAndPath = SLASH + getPackagePath(clasz) + SLASH + name; return clasz.getResource(nameAndPath); }
java
public static URL getResource(final Class<?> clasz, final String name) { checkNotNull("clasz", clasz); checkNotNull("name", name); final String nameAndPath = SLASH + getPackagePath(clasz) + SLASH + name; return clasz.getResource(nameAndPath); }
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Get the path to a resource located in the same package as a given class. @param clasz Class with the same package where the resource is located - Cannot be <code>null</code>. @param name Filename of the resource - Cannot be <code>null</code>. @return Resource URL.
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71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L133-L138
145,384
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.addToClasspath
public static void addToClasspath(final File file, final ClassLoader classLoader) { checkNotNull("file", file); try { addToClasspath(file.toURI().toURL(), classLoader); } catch (final MalformedURLException e) { throw new RuntimeException(e); } }
java
public static void addToClasspath(final File file, final ClassLoader classLoader) { checkNotNull("file", file); try { addToClasspath(file.toURI().toURL(), classLoader); } catch (final MalformedURLException e) { throw new RuntimeException(e); } }
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Adds a file to the classpath. @param file File to add - Cannot be <code>null</code>. @param classLoader Class loader to use - Cannot be <code>null</code>.
[ "Adds", "a", "file", "to", "the", "classpath", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L227-L234
145,385
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.addToClasspath
public static void addToClasspath(final String url, final ClassLoader classLoader) { checkNotNull("url", url); try { addToClasspath(new URL(url), classLoader); } catch (final MalformedURLException e) { throw new RuntimeException(e); } }
java
public static void addToClasspath(final String url, final ClassLoader classLoader) { checkNotNull("url", url); try { addToClasspath(new URL(url), classLoader); } catch (final MalformedURLException e) { throw new RuntimeException(e); } }
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Adds an URL to the classpath. @param url URL to add - Cannot be <code>null</code>. @param classLoader Class loader to use - Cannot be <code>null</code>.
[ "Adds", "an", "URL", "to", "the", "classpath", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L254-L261
145,386
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.containsURL
public static boolean containsURL(final URL[] urls, final URL url) { checkNotNull("urls", urls); checkNotNull("url", url); for (int i = 0; i < urls.length; i++) { final URL element = urls[i]; final String elementStr = element.toExternalForm(); final String urlStr = url.toExternalForm(); if (elementStr.equals(urlStr)) { return true; } } return false; }
java
public static boolean containsURL(final URL[] urls, final URL url) { checkNotNull("urls", urls); checkNotNull("url", url); for (int i = 0; i < urls.length; i++) { final URL element = urls[i]; final String elementStr = element.toExternalForm(); final String urlStr = url.toExternalForm(); if (elementStr.equals(urlStr)) { return true; } } return false; }
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Checks if the array or URLs contains the given URL. @param urls Array of URLs - Cannot be <code>null</code>. @param url URL to find - Cannot be <code>null</code>. @return If the URL is in the array TRUE else FALSE.
[ "Checks", "if", "the", "array", "or", "URLs", "contains", "the", "given", "URL", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L273-L285
145,387
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.createHash
public static String createHash(final File file, final String algorithm) { checkNotNull("file", file); checkNotNull("algorithm", algorithm); try { try (final FileInputStream in = new FileInputStream(file)) { return createHash(in, algorithm); } } catch (final IOException ex) { throw new RuntimeException(ex); } }
java
public static String createHash(final File file, final String algorithm) { checkNotNull("file", file); checkNotNull("algorithm", algorithm); try { try (final FileInputStream in = new FileInputStream(file)) { return createHash(in, algorithm); } } catch (final IOException ex) { throw new RuntimeException(ex); } }
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Creates a HEX encoded hash from a file. @param file File to create a hash for - Cannot be <code>null</code>. @param algorithm Hash algorithm like "MD5" or "SHA" - Cannot be <code>null</code>. @return HEX encoded hash.
[ "Creates", "a", "HEX", "encoded", "hash", "from", "a", "file", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L324-L334
145,388
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.createHash
public static String createHash(final InputStream inputStream, final String algorithm) { checkNotNull("inputStream", inputStream); checkNotNull("algorithm", algorithm); try { final MessageDigest messageDigest = MessageDigest.getInstance(algorithm); try (final BufferedInputStream in = new BufferedInputStream(inputStream)) { final byte[] buf = new byte[1024]; int count = 0; while ((count = in.read(buf)) > -1) { messageDigest.update(buf, 0, count); } } return encodeHex(messageDigest.digest()); } catch (final NoSuchAlgorithmException | IOException ex) { throw new RuntimeException(ex); } }
java
public static String createHash(final InputStream inputStream, final String algorithm) { checkNotNull("inputStream", inputStream); checkNotNull("algorithm", algorithm); try { final MessageDigest messageDigest = MessageDigest.getInstance(algorithm); try (final BufferedInputStream in = new BufferedInputStream(inputStream)) { final byte[] buf = new byte[1024]; int count = 0; while ((count = in.read(buf)) > -1) { messageDigest.update(buf, 0, count); } } return encodeHex(messageDigest.digest()); } catch (final NoSuchAlgorithmException | IOException ex) { throw new RuntimeException(ex); } }
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Creates a HEX encoded hash from a stream. @param inputStream Stream to create a hash for - Cannot be <code>null</code>. @param algorithm Hash algorithm like "MD5" or "SHA" - Cannot be <code>null</code>. @return HEX encoded hash.
[ "Creates", "a", "HEX", "encoded", "hash", "from", "a", "stream", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L346-L362
145,389
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.createCipher
private static Cipher createCipher(final String algorithm, final int mode, final char[] password, final byte[] salt, final int count) throws GeneralSecurityException { final SecretKeyFactory keyFactory = SecretKeyFactory.getInstance(algorithm); final PBEKeySpec keySpec = new PBEKeySpec(password); final SecretKey key = keyFactory.generateSecret(keySpec); final Cipher cipher = Cipher.getInstance(algorithm); final PBEParameterSpec params = new PBEParameterSpec(salt, count); cipher.init(mode, key, params); return cipher; }
java
private static Cipher createCipher(final String algorithm, final int mode, final char[] password, final byte[] salt, final int count) throws GeneralSecurityException { final SecretKeyFactory keyFactory = SecretKeyFactory.getInstance(algorithm); final PBEKeySpec keySpec = new PBEKeySpec(password); final SecretKey key = keyFactory.generateSecret(keySpec); final Cipher cipher = Cipher.getInstance(algorithm); final PBEParameterSpec params = new PBEParameterSpec(salt, count); cipher.init(mode, key, params); return cipher; }
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Creates a cipher for encryption or decryption. @param algorithm PBE algorithm like "PBEWithMD5AndDES" or "PBEWithMD5AndTripleDES". @param mode Encyrption or decyrption. @param password Password. @param salt Salt usable with algorithm. @param count Iterations. @return Ready initialized cipher. @throws GeneralSecurityException Error creating the cipher.
[ "Creates", "a", "cipher", "for", "encryption", "or", "decryption", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L383-L394
145,390
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.encryptPasswordBased
public static byte[] encryptPasswordBased(final String algorithm, final byte[] data, final char[] password, final byte[] salt, final int count) { checkNotNull("algorithm", algorithm); checkNotNull("data", data); checkNotNull("password", password); checkNotNull("salt", salt); try { final Cipher cipher = createCipher(algorithm, Cipher.ENCRYPT_MODE, password, salt, count); return cipher.doFinal(data); } catch (final Exception ex) { throw new RuntimeException("Error encrypting the password!", ex); } }
java
public static byte[] encryptPasswordBased(final String algorithm, final byte[] data, final char[] password, final byte[] salt, final int count) { checkNotNull("algorithm", algorithm); checkNotNull("data", data); checkNotNull("password", password); checkNotNull("salt", salt); try { final Cipher cipher = createCipher(algorithm, Cipher.ENCRYPT_MODE, password, salt, count); return cipher.doFinal(data); } catch (final Exception ex) { throw new RuntimeException("Error encrypting the password!", ex); } }
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Encrypts some data based on a password. @param algorithm PBE algorithm like "PBEWithMD5AndDES" or "PBEWithMD5AndTripleDES" - Cannot be <code>null</code>. @param data Data to encrypt - Cannot be <code>null</code>. @param password Password - Cannot be <code>null</code>. @param salt Salt usable with algorithm - Cannot be <code>null</code>. @param count Iterations. @return Encrypted data.
[ "Encrypts", "some", "data", "based", "on", "a", "password", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L412-L426
145,391
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.decryptPasswordBased
public static byte[] decryptPasswordBased(final String algorithm, final byte[] encryptedData, final char[] password, final byte[] salt, final int count) { checkNotNull("algorithm", algorithm); checkNotNull("encryptedData", encryptedData); checkNotNull("password", password); checkNotNull("salt", salt); try { final Cipher cipher = createCipher(algorithm, Cipher.DECRYPT_MODE, password, salt, count); return cipher.doFinal(encryptedData); } catch (final Exception ex) { throw new RuntimeException("Error decrypting the password!", ex); } }
java
public static byte[] decryptPasswordBased(final String algorithm, final byte[] encryptedData, final char[] password, final byte[] salt, final int count) { checkNotNull("algorithm", algorithm); checkNotNull("encryptedData", encryptedData); checkNotNull("password", password); checkNotNull("salt", salt); try { final Cipher cipher = createCipher(algorithm, Cipher.DECRYPT_MODE, password, salt, count); return cipher.doFinal(encryptedData); } catch (final Exception ex) { throw new RuntimeException("Error decrypting the password!", ex); } }
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Decrypts some data based on a password. @param algorithm PBE algorithm like "PBEWithMD5AndDES" or "PBEWithMD5AndTripleDES" - Cannot be <code>null</code>. @param encryptedData Data to decrypt - Cannot be <code>null</code>. @param password Password - Cannot be <code>null</code>. @param salt Salt usable with algorithm - Cannot be <code>null</code>. @param count Iterations. @return Encrypted data.
[ "Decrypts", "some", "data", "based", "on", "a", "password", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L444-L458
145,392
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.createUrl
public static URL createUrl(final URL baseUrl, final String path, final String filename) { checkNotNull("baseUrl", baseUrl); checkNotNull("filename", filename); try { String baseUrlStr = baseUrl.toString(); if (!baseUrlStr.endsWith(SLASH)) { baseUrlStr = baseUrlStr + SLASH; } final String pathStr; if ((path == null) || (path.length() == 0)) { pathStr = ""; } else { if (path.endsWith(SLASH)) { pathStr = path; } else { pathStr = path + SLASH; } } return new URL(baseUrlStr + pathStr + filename); } catch (final IOException ex) { throw new RuntimeException(ex); } }
java
public static URL createUrl(final URL baseUrl, final String path, final String filename) { checkNotNull("baseUrl", baseUrl); checkNotNull("filename", filename); try { String baseUrlStr = baseUrl.toString(); if (!baseUrlStr.endsWith(SLASH)) { baseUrlStr = baseUrlStr + SLASH; } final String pathStr; if ((path == null) || (path.length() == 0)) { pathStr = ""; } else { if (path.endsWith(SLASH)) { pathStr = path; } else { pathStr = path + SLASH; } } return new URL(baseUrlStr + pathStr + filename); } catch (final IOException ex) { throw new RuntimeException(ex); } }
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Creates an URL based on a directory a relative path and a filename. @param baseUrl Directory URL with or without slash ("/") at the end of the string - Cannot be <code>null</code>. @param path Relative path inside the base URL (with or without slash ("/") at the end of the string) - Can be <code>null</code> or an empty string. @param filename Filename without path - Cannot be <code>null</code>. @return URL.
[ "Creates", "an", "URL", "based", "on", "a", "directory", "a", "relative", "path", "and", "a", "filename", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L473-L495
145,393
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.fileInsideDirectory
public static boolean fileInsideDirectory(final File dir, final File file) { checkNotNull("dir", dir); checkNotNull("file", file); final String dirPath = getCanonicalPath(dir); final String filePath = getCanonicalPath(file); return filePath.startsWith(dirPath); }
java
public static boolean fileInsideDirectory(final File dir, final File file) { checkNotNull("dir", dir); checkNotNull("file", file); final String dirPath = getCanonicalPath(dir); final String filePath = getCanonicalPath(file); return filePath.startsWith(dirPath); }
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Checks if a given file is inside the given directory. @param dir Base directory - Cannot be <code>null</code>. @param file File - Cannot be <code>null</code>. @return If the file is inside the directory TRUE, else FALSE.
[ "Checks", "if", "a", "given", "file", "is", "inside", "the", "given", "directory", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L533-L540
145,394
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.addToClasspath
public static void addToClasspath(final URL url, final ClassLoader classLoader) { checkNotNull("url", url); checkNotNull("classLoader", classLoader); if (!(classLoader instanceof URLClassLoader)) { throw new IllegalArgumentException("Cannot add '" + url + "' to classloader because it's not an URL classloader"); } final URLClassLoader urlClassLoader = (URLClassLoader) classLoader; if (!containsURL(urlClassLoader.getURLs(), url)) { try { final Method addURL = URLClassLoader.class.getDeclaredMethod("addURL", new Class[] { URL.class }); addURL.setAccessible(true); addURL.invoke(urlClassLoader, new Object[] { url }); } catch (final NoSuchMethodException e) { throw new RuntimeException(e); } catch (final IllegalArgumentException e) { throw new RuntimeException(e); } catch (final IllegalAccessException e) { throw new RuntimeException(e); } catch (final InvocationTargetException e) { throw new RuntimeException(e); } } }
java
public static void addToClasspath(final URL url, final ClassLoader classLoader) { checkNotNull("url", url); checkNotNull("classLoader", classLoader); if (!(classLoader instanceof URLClassLoader)) { throw new IllegalArgumentException("Cannot add '" + url + "' to classloader because it's not an URL classloader"); } final URLClassLoader urlClassLoader = (URLClassLoader) classLoader; if (!containsURL(urlClassLoader.getURLs(), url)) { try { final Method addURL = URLClassLoader.class.getDeclaredMethod("addURL", new Class[] { URL.class }); addURL.setAccessible(true); addURL.invoke(urlClassLoader, new Object[] { url }); } catch (final NoSuchMethodException e) { throw new RuntimeException(e); } catch (final IllegalArgumentException e) { throw new RuntimeException(e); } catch (final IllegalAccessException e) { throw new RuntimeException(e); } catch (final InvocationTargetException e) { throw new RuntimeException(e); } } }
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Adds an URL to the class path. @param url URL to add - Cannot be <code>null</code>. @param classLoader Class loader to use - Cannot be <code>null</code>.
[ "Adds", "an", "URL", "to", "the", "class", "path", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L634-L657
145,395
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.invoke
public static Object invoke(final Object obj, final String methodName, final Class<?>[] argTypes, final Object[] args) throws InvokeMethodFailedException { checkNotNull("obj", obj); checkNotNull("methodName", methodName); final Class<?>[] argTypesIntern; final Object[] argsIntern; if (argTypes == null) { argTypesIntern = new Class[] {}; if (args != null) { throw new IllegalArgumentException("The argument 'argTypes' is null but " + "'args' containes values!"); } argsIntern = new Object[] {}; } else { argTypesIntern = argTypes; if (args == null) { throw new IllegalArgumentException("The argument 'argTypes' contains classes " + "but 'args' is null!"); } argsIntern = args; } checkSameLength(argTypesIntern, argsIntern); String returnType = null; try { final Method method = obj.getClass().getMethod(methodName, argTypesIntern); if (method.getReturnType() == null) { returnType = "void"; } else { returnType = method.getReturnType().getName(); } return method.invoke(obj, argsIntern); } catch (final SecurityException ex) { throw new InvokeMethodFailedException("Security problem with '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } catch (final NoSuchMethodException ex) { throw new InvokeMethodFailedException("Method '" + getMethodSignature(returnType, methodName, argTypesIntern) + "' not found! [" + obj.getClass().getName() + "]", ex); } catch (final IllegalArgumentException ex) { throw new InvokeMethodFailedException("Argument problem with '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } catch (final IllegalAccessException ex) { throw new InvokeMethodFailedException("Access problem with '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } catch (final InvocationTargetException ex) { throw new InvokeMethodFailedException("Got an exception when calling '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } }
java
public static Object invoke(final Object obj, final String methodName, final Class<?>[] argTypes, final Object[] args) throws InvokeMethodFailedException { checkNotNull("obj", obj); checkNotNull("methodName", methodName); final Class<?>[] argTypesIntern; final Object[] argsIntern; if (argTypes == null) { argTypesIntern = new Class[] {}; if (args != null) { throw new IllegalArgumentException("The argument 'argTypes' is null but " + "'args' containes values!"); } argsIntern = new Object[] {}; } else { argTypesIntern = argTypes; if (args == null) { throw new IllegalArgumentException("The argument 'argTypes' contains classes " + "but 'args' is null!"); } argsIntern = args; } checkSameLength(argTypesIntern, argsIntern); String returnType = null; try { final Method method = obj.getClass().getMethod(methodName, argTypesIntern); if (method.getReturnType() == null) { returnType = "void"; } else { returnType = method.getReturnType().getName(); } return method.invoke(obj, argsIntern); } catch (final SecurityException ex) { throw new InvokeMethodFailedException("Security problem with '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } catch (final NoSuchMethodException ex) { throw new InvokeMethodFailedException("Method '" + getMethodSignature(returnType, methodName, argTypesIntern) + "' not found! [" + obj.getClass().getName() + "]", ex); } catch (final IllegalArgumentException ex) { throw new InvokeMethodFailedException("Argument problem with '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } catch (final IllegalAccessException ex) { throw new InvokeMethodFailedException("Access problem with '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } catch (final InvocationTargetException ex) { throw new InvokeMethodFailedException("Got an exception when calling '" + getMethodSignature(returnType, methodName, argTypesIntern) + "'! [" + obj.getClass().getName() + "]", ex); } }
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Calls a method with reflection and maps all errors into one exception. @param obj The object the underlying method is invoked from - Cannot be <code>null</code>. @param methodName Name of the Method - Cannot be <code>null</code>. @param argTypes The list of parameters - May be <code>null</code>. @param args Arguments the arguments used for the method call - May be <code>null</code> if "argTypes" is also <code>null</code>. @return The result of dispatching the method represented by this object on <code>obj</code> with parameters <code>args</code>. @throws InvokeMethodFailedException Invoking the method failed for some reason.
[ "Calls", "a", "method", "with", "reflection", "and", "maps", "all", "errors", "into", "one", "exception", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L737-L786
145,396
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.replaceVars
public static String replaceVars(final String str, final Map<String, String> vars) { if ((str == null) || (str.length() == 0) || (vars == null) || (vars.size() == 0)) { return str; } final StringBuilder sb = new StringBuilder(); int end = -1; int from = 0; int start = -1; while ((start = str.indexOf("${", from)) > -1) { sb.append(str.substring(end + 1, start)); end = str.indexOf('}', start + 1); if (end == -1) { // No closing bracket found... sb.append(str.substring(start)); from = str.length(); } else { final String key = str.substring(start + 2, end); final String value = (String) vars.get(key); if (value == null) { sb.append("${"); sb.append(key); sb.append("}"); } else { sb.append(value); } from = end + 1; } } sb.append(str.substring(from)); return sb.toString(); }
java
public static String replaceVars(final String str, final Map<String, String> vars) { if ((str == null) || (str.length() == 0) || (vars == null) || (vars.size() == 0)) { return str; } final StringBuilder sb = new StringBuilder(); int end = -1; int from = 0; int start = -1; while ((start = str.indexOf("${", from)) > -1) { sb.append(str.substring(end + 1, start)); end = str.indexOf('}', start + 1); if (end == -1) { // No closing bracket found... sb.append(str.substring(start)); from = str.length(); } else { final String key = str.substring(start + 2, end); final String value = (String) vars.get(key); if (value == null) { sb.append("${"); sb.append(key); sb.append("}"); } else { sb.append(value); } from = end + 1; } } sb.append(str.substring(from)); return sb.toString(); }
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Replaces all variables inside a string with values from a map. @param str Text with variables (Format: ${key} ) - May be <code>null</code> or empty. @param vars Map with key/values (both of type <code>String</code> - May be <code>null</code>. @return String with replaced variables. Unknown variables will remain unchanged.
[ "Replaces", "all", "variables", "inside", "a", "string", "with", "values", "from", "a", "map", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L929-L964
145,397
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.zipFile
private static void zipFile(final File srcFile, final String destPath, final ZipOutputStream out) throws IOException { final byte[] buf = new byte[1024]; try (final InputStream in = new BufferedInputStream(new FileInputStream(srcFile))) { final ZipEntry zipEntry = new ZipEntry(concatPathAndFilename(destPath, srcFile.getName(), File.separator)); zipEntry.setTime(srcFile.lastModified()); out.putNextEntry(zipEntry); int len; while ((len = in.read(buf)) > 0) { out.write(buf, 0, len); } out.closeEntry(); } }
java
private static void zipFile(final File srcFile, final String destPath, final ZipOutputStream out) throws IOException { final byte[] buf = new byte[1024]; try (final InputStream in = new BufferedInputStream(new FileInputStream(srcFile))) { final ZipEntry zipEntry = new ZipEntry(concatPathAndFilename(destPath, srcFile.getName(), File.separator)); zipEntry.setTime(srcFile.lastModified()); out.putNextEntry(zipEntry); int len; while ((len = in.read(buf)) > 0) { out.write(buf, 0, len); } out.closeEntry(); } }
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Adds a file to a ZIP output stream. @param srcFile File to add - Cannot be <code>null</code>. @param destPath Path to use for the file - May be <code>null</code> or empty. @param out Destination stream - Cannot be <code>null</code>. @throws IOException Error writing to the output stream.
[ "Adds", "a", "file", "to", "a", "ZIP", "output", "stream", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L1297-L1310
145,398
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.listFiles
private static File[] listFiles(final File srcDir, final FileFilter filter) { final File[] files; if (filter == null) { files = srcDir.listFiles(); } else { files = srcDir.listFiles(filter); } return files; }
java
private static File[] listFiles(final File srcDir, final FileFilter filter) { final File[] files; if (filter == null) { files = srcDir.listFiles(); } else { files = srcDir.listFiles(filter); } return files; }
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List all files for a directory. @param srcDir Directory to list the files for - Cannot be <code>null</code> and must be a valid directory. @param filter Filter or <code>null</code> for all files. @return List of child entries of the directory.
[ "List", "all", "files", "for", "a", "directory", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L1322-L1332
145,399
fuinorg/utils4j
src/main/java/org/fuin/utils4j/Utils4J.java
Utils4J.zipDir
private static void zipDir(final File srcDir, final FileFilter filter, final String destPath, final ZipOutputStream out) throws IOException { final File[] files = listFiles(srcDir, filter); for (int i = 0; i < files.length; i++) { if (files[i].isDirectory()) { zipDir(files[i], filter, concatPathAndFilename(destPath, files[i].getName(), File.separator), out); } else { zipFile(files[i], destPath, out); } } }
java
private static void zipDir(final File srcDir, final FileFilter filter, final String destPath, final ZipOutputStream out) throws IOException { final File[] files = listFiles(srcDir, filter); for (int i = 0; i < files.length; i++) { if (files[i].isDirectory()) { zipDir(files[i], filter, concatPathAndFilename(destPath, files[i].getName(), File.separator), out); } else { zipFile(files[i], destPath, out); } } }
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Add a directory to a ZIP output stream. @param srcDir Directory to add - Cannot be <code>null</code> and must be a valid directory. @param filter Filter or <code>null</code> for all files. @param destPath Path to use for the ZIP archive - May be <code>null</code> or an empyt string. @param out Destination stream - Cannot be <code>null</code>. @throws IOException Error writing to the output stream.
[ "Add", "a", "directory", "to", "a", "ZIP", "output", "stream", "." ]
71cf88e0a8d8ed67bbac513bf3cab165cd7e3280
https://github.com/fuinorg/utils4j/blob/71cf88e0a8d8ed67bbac513bf3cab165cd7e3280/src/main/java/org/fuin/utils4j/Utils4J.java#L1349-L1361