id int32 0 165k | repo stringlengths 7 58 | path stringlengths 12 218 | func_name stringlengths 3 140 | original_string stringlengths 73 34.1k | language stringclasses 1 value | code stringlengths 73 34.1k | code_tokens list | docstring stringlengths 3 16k | docstring_tokens list | sha stringlengths 40 40 | url stringlengths 105 339 |
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141,100 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java | Topic.getScores | public DoubleArray getScores() {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
return (DoubleArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores)));} | java | public DoubleArray getScores() {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
return (DoubleArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores)));} | [
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] | getter for scores - gets
@generated
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java#L87-L90 |
141,101 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java | Topic.setScores | public void setScores(DoubleArray v) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
jcasType.ll_cas.ll_setRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setScores(DoubleArray v) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
jcasType.ll_cas.ll_setRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores, jcasType.ll_cas.ll_getFSRef(v));} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java#L96-L99 |
141,102 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java | Topic.getScores | public double getScores(int i) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i);
return jcasType.ll_cas.ll_getDoubleArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i);} | java | public double getScores(int i) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i);
return jcasType.ll_cas.ll_getDoubleArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i);} | [
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141,103 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java | Topic.setScores | public void setScores(int i, double v) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i);
jcasType.ll_cas.ll_setDoubleArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i, v);} | java | public void setScores(int i, double v) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_scores == null)
jcasType.jcas.throwFeatMissing("scores", "ch.epfl.bbp.uima.types.Topic");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i);
jcasType.ll_cas.ll_setDoubleArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Topic_Type)jcasType).casFeatCode_scores), i, v);} | [
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141,104 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java | Topic.getMostLikelyTopic | public int getMostLikelyTopic() {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_mostLikelyTopic == null)
jcasType.jcas.throwFeatMissing("mostLikelyTopic", "ch.epfl.bbp.uima.types.Topic");
return jcasType.ll_cas.ll_getIntValue(addr, ((Topic_Type)jcasType).casFeatCode_mostLikelyTopic);} | java | public int getMostLikelyTopic() {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_mostLikelyTopic == null)
jcasType.jcas.throwFeatMissing("mostLikelyTopic", "ch.epfl.bbp.uima.types.Topic");
return jcasType.ll_cas.ll_getIntValue(addr, ((Topic_Type)jcasType).casFeatCode_mostLikelyTopic);} | [
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] | getter for mostLikelyTopic - gets The most likely topic id for this topic
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@return value of the feature | [
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141,105 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/ch/epfl/bbp/uima/types/Topic.java | Topic.setMostLikelyTopic | public void setMostLikelyTopic(int v) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_mostLikelyTopic == null)
jcasType.jcas.throwFeatMissing("mostLikelyTopic", "ch.epfl.bbp.uima.types.Topic");
jcasType.ll_cas.ll_setIntValue(addr, ((Topic_Type)jcasType).casFeatCode_mostLikelyTopic, v);} | java | public void setMostLikelyTopic(int v) {
if (Topic_Type.featOkTst && ((Topic_Type)jcasType).casFeat_mostLikelyTopic == null)
jcasType.jcas.throwFeatMissing("mostLikelyTopic", "ch.epfl.bbp.uima.types.Topic");
jcasType.ll_cas.ll_setIntValue(addr, ((Topic_Type)jcasType).casFeatCode_mostLikelyTopic, v);} | [
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141,106 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMMEvaluator.java | AbbvGapsHMMEvaluator.updateOutgoingEdgesStateM | protected void updateOutgoingEdgesStateM(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.DL, Transitions.t_DL_to_M, emission);
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.M, Transitions.t_M_in, emission);
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.D, Transitions.t_D_to_M, emission);
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.S, Transitions.t_S_to_M, emission);
} | java | protected void updateOutgoingEdgesStateM(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.DL, Transitions.t_DL_to_M, emission);
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.M, Transitions.t_M_in, emission);
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.D, Transitions.t_D_to_M, emission);
updateOutgoingEdges(currS, currL, States.M, prevS, prevL, States.S, Transitions.t_S_to_M, emission);
} | [
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141,107 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMMEvaluator.java | AbbvGapsHMMEvaluator.updateOutgoingEdgesStateD | protected void updateOutgoingEdgesStateD(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.D, prevS, prevL, States.D, Transitions.t_D_in, emission);
updateOutgoingEdges(currS, currL, States.D, prevS, prevL, States.M, Transitions.t_M_to_D, emission);
} | java | protected void updateOutgoingEdgesStateD(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.D, prevS, prevL, States.D, Transitions.t_D_in, emission);
updateOutgoingEdges(currS, currL, States.D, prevS, prevL, States.M, Transitions.t_M_to_D, emission);
} | [
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141,108 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMMEvaluator.java | AbbvGapsHMMEvaluator.updateOutgoingEdgesStateDL | protected void updateOutgoingEdgesStateDL(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.DL, prevS, prevL, States.DL, Transitions.t_DL_in, emission);
updateOutgoingEdges(currS, currL, States.DL, prevS, prevL, States.S, Transitions.t_S_to_DL, emission);
} | java | protected void updateOutgoingEdgesStateDL(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.DL, prevS, prevL, States.DL, Transitions.t_DL_in, emission);
updateOutgoingEdges(currS, currL, States.DL, prevS, prevL, States.S, Transitions.t_S_to_DL, emission);
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] | Enumerates the possible transitions into state DL. | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMMEvaluator.java#L386-L393 |
141,109 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMMEvaluator.java | AbbvGapsHMMEvaluator.updateOutgoingEdgesStateEND | protected void updateOutgoingEdgesStateEND(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.END, prevS, prevL, States.D, Transitions.t_D_to_END, emission);
updateOutgoingEdges(currS, currL, States.END, prevS, prevL, States.M, Transitions.t_M_to_END, emission);
} | java | protected void updateOutgoingEdgesStateEND(
int currS, int currL,
int prevS, int prevL,
Emissions emission
){
updateOutgoingEdges(currS, currL, States.END, prevS, prevL, States.D, Transitions.t_D_to_END, emission);
updateOutgoingEdges(currS, currL, States.END, prevS, prevL, States.M, Transitions.t_M_to_END, emission);
} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMMEvaluator.java#L398-L405 |
141,110 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java | Clause.getRule | public String getRule() {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_rule == null)
jcasType.jcas.throwFeatMissing("rule", "com.digitalpebble.rasp.Clause");
return jcasType.ll_cas.ll_getStringValue(addr, ((Clause_Type)jcasType).casFeatCode_rule);} | java | public String getRule() {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_rule == null)
jcasType.jcas.throwFeatMissing("rule", "com.digitalpebble.rasp.Clause");
return jcasType.ll_cas.ll_getStringValue(addr, ((Clause_Type)jcasType).casFeatCode_rule);} | [
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@generated
@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java#L87-L90 |
141,111 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java | Clause.setRule | public void setRule(String v) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_rule == null)
jcasType.jcas.throwFeatMissing("rule", "com.digitalpebble.rasp.Clause");
jcasType.ll_cas.ll_setStringValue(addr, ((Clause_Type)jcasType).casFeatCode_rule, v);} | java | public void setRule(String v) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_rule == null)
jcasType.jcas.throwFeatMissing("rule", "com.digitalpebble.rasp.Clause");
jcasType.ll_cas.ll_setStringValue(addr, ((Clause_Type)jcasType).casFeatCode_rule, v);} | [
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] | setter for rule - sets
@generated
@param v value to set into the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java#L96-L99 |
141,112 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java | Clause.getSubclauses | public FSArray getSubclauses() {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses)));} | java | public FSArray getSubclauses() {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses)));} | [
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] | getter for subclauses - gets array of subelements. contains WordForms or Clauses
@generated
@return value of the feature | [
"getter",
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java#L109-L112 |
141,113 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java | Clause.setSubclauses | public void setSubclauses(FSArray v) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
jcasType.ll_cas.ll_setRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setSubclauses(FSArray v) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
jcasType.ll_cas.ll_setRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses, jcasType.ll_cas.ll_getFSRef(v));} | [
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] | setter for subclauses - sets array of subelements. contains WordForms or Clauses
@generated
@param v value to set into the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java#L118-L121 |
141,114 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java | Clause.getSubclauses | public Annotation getSubclauses(int i) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i);
return (Annotation)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i)));} | java | public Annotation getSubclauses(int i) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i);
return (Annotation)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i)));} | [
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] | indexed getter for subclauses - gets an indexed value - array of subelements. contains WordForms or Clauses
@generated
@param i index in the array to get
@return value of the element at index i | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java#L128-L132 |
141,115 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Clause.java | Clause.setSubclauses | public void setSubclauses(int i, Annotation v) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setSubclauses(int i, Annotation v) {
if (Clause_Type.featOkTst && ((Clause_Type)jcasType).casFeat_subclauses == null)
jcasType.jcas.throwFeatMissing("subclauses", "com.digitalpebble.rasp.Clause");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Clause_Type)jcasType).casFeatCode_subclauses), i, jcasType.ll_cas.ll_getFSRef(v));} | [
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@generated
@param i index in the array to set
@param v value to set into the array | [
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141,116 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/EventTrigger.java | EventTrigger.getProbability | public String getProbability() {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_probability == null)
jcasType.jcas.throwFeatMissing("probability", "de.julielab.jules.types.EventTrigger");
return jcasType.ll_cas.ll_getStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_probability);} | java | public String getProbability() {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_probability == null)
jcasType.jcas.throwFeatMissing("probability", "de.julielab.jules.types.EventTrigger");
return jcasType.ll_cas.ll_getStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_probability);} | [
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@return value of the feature | [
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141,117 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/EventTrigger.java | EventTrigger.setProbability | public void setProbability(String v) {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_probability == null)
jcasType.jcas.throwFeatMissing("probability", "de.julielab.jules.types.EventTrigger");
jcasType.ll_cas.ll_setStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_probability, v);} | java | public void setProbability(String v) {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_probability == null)
jcasType.jcas.throwFeatMissing("probability", "de.julielab.jules.types.EventTrigger");
jcasType.ll_cas.ll_setStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_probability, v);} | [
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141,118 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/EventTrigger.java | EventTrigger.getSpecifity | public String getSpecifity() {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_specifity == null)
jcasType.jcas.throwFeatMissing("specifity", "de.julielab.jules.types.EventTrigger");
return jcasType.ll_cas.ll_getStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_specifity);} | java | public String getSpecifity() {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_specifity == null)
jcasType.jcas.throwFeatMissing("specifity", "de.julielab.jules.types.EventTrigger");
return jcasType.ll_cas.ll_getStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_specifity);} | [
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141,119 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/EventTrigger.java | EventTrigger.setSpecifity | public void setSpecifity(String v) {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_specifity == null)
jcasType.jcas.throwFeatMissing("specifity", "de.julielab.jules.types.EventTrigger");
jcasType.ll_cas.ll_setStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_specifity, v);} | java | public void setSpecifity(String v) {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_specifity == null)
jcasType.jcas.throwFeatMissing("specifity", "de.julielab.jules.types.EventTrigger");
jcasType.ll_cas.ll_setStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_specifity, v);} | [
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141,120 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/EventTrigger.java | EventTrigger.getImportance | public String getImportance() {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_importance == null)
jcasType.jcas.throwFeatMissing("importance", "de.julielab.jules.types.EventTrigger");
return jcasType.ll_cas.ll_getStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_importance);} | java | public String getImportance() {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_importance == null)
jcasType.jcas.throwFeatMissing("importance", "de.julielab.jules.types.EventTrigger");
return jcasType.ll_cas.ll_getStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_importance);} | [
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141,121 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/EventTrigger.java | EventTrigger.setImportance | public void setImportance(String v) {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_importance == null)
jcasType.jcas.throwFeatMissing("importance", "de.julielab.jules.types.EventTrigger");
jcasType.ll_cas.ll_setStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_importance, v);} | java | public void setImportance(String v) {
if (EventTrigger_Type.featOkTst && ((EventTrigger_Type)jcasType).casFeat_importance == null)
jcasType.jcas.throwFeatMissing("importance", "de.julielab.jules.types.EventTrigger");
jcasType.ll_cas.ll_setStringValue(addr, ((EventTrigger_Type)jcasType).casFeatCode_importance, v);} | [
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141,122 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/muc7/MUC7Header.java | MUC7Header.getStoryID | public String getStoryID() {
if (MUC7Header_Type.featOkTst && ((MUC7Header_Type)jcasType).casFeat_storyID == null)
jcasType.jcas.throwFeatMissing("storyID", "de.julielab.jules.types.muc7.MUC7Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((MUC7Header_Type)jcasType).casFeatCode_storyID);} | java | public String getStoryID() {
if (MUC7Header_Type.featOkTst && ((MUC7Header_Type)jcasType).casFeat_storyID == null)
jcasType.jcas.throwFeatMissing("storyID", "de.julielab.jules.types.muc7.MUC7Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((MUC7Header_Type)jcasType).casFeatCode_storyID);} | [
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] | getter for storyID - gets the storyID of the MUC7 documents
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/muc7/MUC7Header.java#L86-L89 |
141,123 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/muc7/MUC7Header.java | MUC7Header.setStoryID | public void setStoryID(String v) {
if (MUC7Header_Type.featOkTst && ((MUC7Header_Type)jcasType).casFeat_storyID == null)
jcasType.jcas.throwFeatMissing("storyID", "de.julielab.jules.types.muc7.MUC7Header");
jcasType.ll_cas.ll_setStringValue(addr, ((MUC7Header_Type)jcasType).casFeatCode_storyID, v);} | java | public void setStoryID(String v) {
if (MUC7Header_Type.featOkTst && ((MUC7Header_Type)jcasType).casFeat_storyID == null)
jcasType.jcas.throwFeatMissing("storyID", "de.julielab.jules.types.muc7.MUC7Header");
jcasType.ll_cas.ll_setStringValue(addr, ((MUC7Header_Type)jcasType).casFeatCode_storyID, v);} | [
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141,124 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/Level2.java | Level2.explainScore | public String explainScore(StringWrapper s, StringWrapper t)
{
StringBuffer buf = new StringBuffer();
BagOfTokens sBag = asBagOfTokens(s);
BagOfTokens tBag = asBagOfTokens(t);
double sumOverI = 0;
for (Iterator i = sBag.tokenIterator(); i.hasNext(); ) {
Token tokenI = (Token)i.next();
buf.append("token="+tokenI);
double maxOverJ = -Double.MAX_VALUE;
Token closestToI = null;
for (Iterator j = tBag.tokenIterator(); j.hasNext(); ) {
Token tokenJ = (Token)j.next();
double scoreItoJ = tokenDistance.score( tokenI.getValue(), tokenJ.getValue() );
buf.append(" dist("+tokenJ.getValue()+")="+scoreItoJ);
if (scoreItoJ >= maxOverJ) {
maxOverJ = scoreItoJ;
closestToI = tokenJ;
}
}
sumOverI += maxOverJ;
buf.append(" match="+closestToI+" score="+maxOverJ+"\n");
}
buf.append("total: "+sumOverI+"/"+sBag.size()+" = "+score(s,t)+"\n");
return buf.toString();
} | java | public String explainScore(StringWrapper s, StringWrapper t)
{
StringBuffer buf = new StringBuffer();
BagOfTokens sBag = asBagOfTokens(s);
BagOfTokens tBag = asBagOfTokens(t);
double sumOverI = 0;
for (Iterator i = sBag.tokenIterator(); i.hasNext(); ) {
Token tokenI = (Token)i.next();
buf.append("token="+tokenI);
double maxOverJ = -Double.MAX_VALUE;
Token closestToI = null;
for (Iterator j = tBag.tokenIterator(); j.hasNext(); ) {
Token tokenJ = (Token)j.next();
double scoreItoJ = tokenDistance.score( tokenI.getValue(), tokenJ.getValue() );
buf.append(" dist("+tokenJ.getValue()+")="+scoreItoJ);
if (scoreItoJ >= maxOverJ) {
maxOverJ = scoreItoJ;
closestToI = tokenJ;
}
}
sumOverI += maxOverJ;
buf.append(" match="+closestToI+" score="+maxOverJ+"\n");
}
buf.append("total: "+sumOverI+"/"+sBag.size()+" = "+score(s,t)+"\n");
return buf.toString();
} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/Level2.java#L49-L74 |
141,125 | BlueBrain/bluima | modules/bluima_opennlp/src/main/java/ch/epfl/bbp/shaded/opennlp/maxent/io/OldFormatGISModelReader.java | OldFormatGISModelReader.main | public static void main (String[] args) throws IOException {
if (args.length < 1) {
System.out.println("Usage: java opennlp.maxent.io.OldFormatGISModelReader model_name_prefix (new_model_name)");
System.exit(0);
}
int nameIndex = 0;
String infilePrefix = args[nameIndex];
String outfile;
if (args.length > nameIndex)
outfile = args[nameIndex+1];
else
outfile = infilePrefix + ".bin.gz";
GISModelReader reader = new OldFormatGISModelReader(infilePrefix);
new SuffixSensitiveGISModelWriter(reader.getModel(),
new File(outfile)).persist();
} | java | public static void main (String[] args) throws IOException {
if (args.length < 1) {
System.out.println("Usage: java opennlp.maxent.io.OldFormatGISModelReader model_name_prefix (new_model_name)");
System.exit(0);
}
int nameIndex = 0;
String infilePrefix = args[nameIndex];
String outfile;
if (args.length > nameIndex)
outfile = args[nameIndex+1];
else
outfile = infilePrefix + ".bin.gz";
GISModelReader reader = new OldFormatGISModelReader(infilePrefix);
new SuffixSensitiveGISModelWriter(reader.getModel(),
new File(outfile)).persist();
} | [
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] | Convert a model created with Maxent 1.0 to a format used with
Maxent 1.2.
<p>Usage: java opennlp.maxent.io.OldFormatGISModelReader model_name_prefix (new_model_name)");
<p>If the new_model_name is left unspecified, the new model will be saved
in gzipped, binary format as "<model_name_prefix>.bin.gz". | [
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141,126 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/lookup/SoftTFIDFDictionary.java | SoftTFIDFDictionary.put | public void put(String string,Object value)
{
if (frozen) throw new IllegalStateException("can't add new values to a frozen dictionary");
Set valset = (Set)valueMap.get(string);
if (valset==null) valueMap.put(string, (valset=new HashSet()));
valset.add( value );
} | java | public void put(String string,Object value)
{
if (frozen) throw new IllegalStateException("can't add new values to a frozen dictionary");
Set valset = (Set)valueMap.get(string);
if (valset==null) valueMap.put(string, (valset=new HashSet()));
valset.add( value );
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141,127 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/lookup/SoftTFIDFDictionary.java | SoftTFIDFDictionary.freeze | public void freeze()
{
if (frozen) return;
// train the TFIDF distance on all strings seen
trainDistances();
// now, compute the maxScore of each token, and create an inverted index
if (DEBUG) System.out.println("computing maxScore of "+tokenizer.maxTokenIndex()+" tokens");
invertedIndex = new Set[ tokenizer.maxTokenIndex()+1 ];
maxTFIDFScore = new double[ tokenizer.maxTokenIndex()+1 ];
for (Iterator i=valueMap.keySet().iterator(); i.hasNext(); ) {
String s = (String)i.next();
tfidfDistance.prepare( s );
Token[] tokens = tfidfDistance.getTokens();
for (int j=0; j<tokens.length; j++) {
Token tok = tokens[j];
double w = tfidfDistance.getWeight( tok );
maxTFIDFScore[ tok.getIndex() ] = Math.max( maxTFIDFScore[tok.getIndex()], w );
Set ii = invertedIndex[ tok.getIndex() ];
if (ii==null) ii = invertedIndex[ tok.getIndex() ] = new HashSet();
ii.add( s );
//if (DEBUG) System.out.println("adjust maxscore, invertedIndex for "+tok);
}
}
// find out which tokens are similar to which other tokens
if (DEBUG) System.out.println("computing similar-tokens for "+tokenizer.maxTokenIndex()+" tokens, window="+windowSize);
allTokens = new Token[tokenizer.maxTokenIndex()] ;
numTokens=0;
for (Iterator i=tokenizer.tokenIterator(); i.hasNext(); ) {
Token toki = (Token)i.next();
allTokens[numTokens++] = toki;
}
Arrays.sort(allTokens,LEXICAL_ORDER_FOR_TOKENS);
similarTokens = new Token[tokenizer.maxTokenIndex()+1][];
for (int i=0; i<numTokens; i++) {
Token toki = allTokens[i];
Set likeTokI = findSimilarTokens( toki.getValue(), i );
similarTokens[ toki.getIndex() ] = new Token[ likeTokI.size() ];
int k = 0;
for (Iterator j=likeTokI.iterator(); j.hasNext(); ) {
Token tokj = (Token)j.next();
similarTokens[toki.getIndex()][ k++ ] = tokj;
}
}
frozen = true;
} | java | public void freeze()
{
if (frozen) return;
// train the TFIDF distance on all strings seen
trainDistances();
// now, compute the maxScore of each token, and create an inverted index
if (DEBUG) System.out.println("computing maxScore of "+tokenizer.maxTokenIndex()+" tokens");
invertedIndex = new Set[ tokenizer.maxTokenIndex()+1 ];
maxTFIDFScore = new double[ tokenizer.maxTokenIndex()+1 ];
for (Iterator i=valueMap.keySet().iterator(); i.hasNext(); ) {
String s = (String)i.next();
tfidfDistance.prepare( s );
Token[] tokens = tfidfDistance.getTokens();
for (int j=0; j<tokens.length; j++) {
Token tok = tokens[j];
double w = tfidfDistance.getWeight( tok );
maxTFIDFScore[ tok.getIndex() ] = Math.max( maxTFIDFScore[tok.getIndex()], w );
Set ii = invertedIndex[ tok.getIndex() ];
if (ii==null) ii = invertedIndex[ tok.getIndex() ] = new HashSet();
ii.add( s );
//if (DEBUG) System.out.println("adjust maxscore, invertedIndex for "+tok);
}
}
// find out which tokens are similar to which other tokens
if (DEBUG) System.out.println("computing similar-tokens for "+tokenizer.maxTokenIndex()+" tokens, window="+windowSize);
allTokens = new Token[tokenizer.maxTokenIndex()] ;
numTokens=0;
for (Iterator i=tokenizer.tokenIterator(); i.hasNext(); ) {
Token toki = (Token)i.next();
allTokens[numTokens++] = toki;
}
Arrays.sort(allTokens,LEXICAL_ORDER_FOR_TOKENS);
similarTokens = new Token[tokenizer.maxTokenIndex()+1][];
for (int i=0; i<numTokens; i++) {
Token toki = allTokens[i];
Set likeTokI = findSimilarTokens( toki.getValue(), i );
similarTokens[ toki.getIndex() ] = new Token[ likeTokI.size() ];
int k = 0;
for (Iterator j=likeTokI.iterator(); j.hasNext(); ) {
Token tokj = (Token)j.next();
similarTokens[toki.getIndex()][ k++ ] = tokj;
}
}
frozen = true;
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/lookup/SoftTFIDFDictionary.java#L363-L413 |
141,128 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/lookup/SoftTFIDFDictionary.java | SoftTFIDFDictionary.findSimilarTokens | private Set findSimilarTokens(String s,int i)
{
Set likeTokI = new HashSet();
for (int j=Math.max(0,i-windowSize); j<Math.min(i+windowSize,numTokens); j++) {
if (i!=j) {
Token tokj = allTokens[j];
double d = jaroWinklerDistance.score( s, tokj.getValue() );
if (d>=minTokenSimilarity) likeTokI.add( tokj );
}
}
return likeTokI;
} | java | private Set findSimilarTokens(String s,int i)
{
Set likeTokI = new HashSet();
for (int j=Math.max(0,i-windowSize); j<Math.min(i+windowSize,numTokens); j++) {
if (i!=j) {
Token tokj = allTokens[j];
double d = jaroWinklerDistance.score( s, tokj.getValue() );
if (d>=minTokenSimilarity) likeTokI.add( tokj );
}
}
return likeTokI;
} | [
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141,129 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/lookup/SoftTFIDFDictionary.java | SoftTFIDFDictionary.slowLookup | public int slowLookup(double minScore,String toFind)
{
if (!frozen) freeze();
long start = System.currentTimeMillis();
StringWrapper wa = softTFIDFDistance.prepare( toFind );
result = new ArrayList();
for (Iterator i=valueMap.keySet().iterator(); i.hasNext(); ) {
String found = (String)i.next();
StringWrapper wb = softTFIDFDistance.prepare( found );
double d = softTFIDFDistance.score( wa, wb );
if (d>=minScore) {
Set valset = (Set)valueMap.get(found);
for (Iterator j=valset.iterator(); j.hasNext(); ) {
String valj=(String)j.next();
result.add(new LookupResult(found,valj,d));
}
}
}
Collections.sort( result );
lookupTime = (System.currentTimeMillis()-start) / 1000.0;
return result.size();
} | java | public int slowLookup(double minScore,String toFind)
{
if (!frozen) freeze();
long start = System.currentTimeMillis();
StringWrapper wa = softTFIDFDistance.prepare( toFind );
result = new ArrayList();
for (Iterator i=valueMap.keySet().iterator(); i.hasNext(); ) {
String found = (String)i.next();
StringWrapper wb = softTFIDFDistance.prepare( found );
double d = softTFIDFDistance.score( wa, wb );
if (d>=minScore) {
Set valset = (Set)valueMap.get(found);
for (Iterator j=valset.iterator(); j.hasNext(); ) {
String valj=(String)j.next();
result.add(new LookupResult(found,valj,d));
}
}
}
Collections.sort( result );
lookupTime = (System.currentTimeMillis()-start) / 1000.0;
return result.size();
} | [
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141,130 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/lookup/SoftTFIDFDictionary.java | SoftTFIDFDictionary.storeUpperBound | private void storeUpperBound(Token tok, Token simTok, List usefulTokens, Map upperBoundOnWeight, double sim)
{
double upperBound = tfidfDistance.getWeight(tok)*maxTFIDFScore[simTok.getIndex()]*sim;
if (DEBUG) System.out.println("upper-bounding tok "+simTok+" sim="+sim+" to "+tok+" upperBound "+upperBound);
if (DEBUG) System.out.println("upperBound = "+tfidfDistance.getWeight(tok)+"*"+maxTFIDFScore[simTok.getIndex()]+"*"+sim);
usefulTokens.add( simTok );
upperBoundOnWeight.put( simTok, new Double(upperBound) );
} | java | private void storeUpperBound(Token tok, Token simTok, List usefulTokens, Map upperBoundOnWeight, double sim)
{
double upperBound = tfidfDistance.getWeight(tok)*maxTFIDFScore[simTok.getIndex()]*sim;
if (DEBUG) System.out.println("upper-bounding tok "+simTok+" sim="+sim+" to "+tok+" upperBound "+upperBound);
if (DEBUG) System.out.println("upperBound = "+tfidfDistance.getWeight(tok)+"*"+maxTFIDFScore[simTok.getIndex()]+"*"+sim);
usefulTokens.add( simTok );
upperBoundOnWeight.put( simTok, new Double(upperBound) );
} | [
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141,131 | BlueBrain/bluima | utils/blue_commons/src/main/java/ch/epfl/bbp/io/TextFileWriter.java | TextFileWriter.addLine | public void addLine(String line) {
try {
writer.append(line);
writer.newLine();
} catch (IOException e) {
e.printStackTrace();
}
} | java | public void addLine(String line) {
try {
writer.append(line);
writer.newLine();
} catch (IOException e) {
e.printStackTrace();
}
} | [
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141,132 | BlueBrain/bluima | utils/blue_commons/src/main/java/ch/epfl/bbp/io/TextFileWriter.java | TextFileWriter.addText | public void addText(String text) {
try {
writer.append(text);
} catch (IOException e) {
e.printStackTrace();
}
} | java | public void addText(String text) {
try {
writer.append(text);
} catch (IOException e) {
e.printStackTrace();
}
} | [
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141,133 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java | MultiStringDistance.multiScore | private double[] multiScore(MultiStringWrapper ms,MultiStringWrapper mt)
{
if (ms.size() != mt.size()) {
throw new IllegalArgumentException("inputs have different numbers of fields");
}
int n = ms.size();
double scores[] = new double[n];
for (int i=0; i<n; i++) {
scores[i] = getDistance(i).score(ms.get(i), mt.get(i));
}
return scores;
} | java | private double[] multiScore(MultiStringWrapper ms,MultiStringWrapper mt)
{
if (ms.size() != mt.size()) {
throw new IllegalArgumentException("inputs have different numbers of fields");
}
int n = ms.size();
double scores[] = new double[n];
for (int i=0; i<n; i++) {
scores[i] = getDistance(i).score(ms.get(i), mt.get(i));
}
return scores;
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141,134 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java | MultiStringDistance.score | final public double score(String s, String t) {
return score(prepare(s), prepare(t));
} | java | final public double score(String s, String t) {
return score(prepare(s), prepare(t));
} | [
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141,135 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java | MultiStringDistance.explainScore | final public String explainScore(String s, String t) {
return explainScore(prepare(s),prepare(t));
} | java | final public String explainScore(String s, String t) {
return explainScore(prepare(s),prepare(t));
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141,136 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java | MultiStringDistance.prepare | final public StringWrapper prepare(String s) {
MultiStringWrapper ms = new MultiStringWrapper(s,delim);
if (!isLegalMultiStringWrapperSize(ms.size())) {
throw new IllegalArgumentException("string has invalid number of fields");
}
for (int i=0; i<ms.size(); i++) {
ms.set(i, getDistance(i).prepare( ms.get(i).unwrap() ));
}
return ms;
} | java | final public StringWrapper prepare(String s) {
MultiStringWrapper ms = new MultiStringWrapper(s,delim);
if (!isLegalMultiStringWrapperSize(ms.size())) {
throw new IllegalArgumentException("string has invalid number of fields");
}
for (int i=0; i<ms.size(); i++) {
ms.set(i, getDistance(i).prepare( ms.get(i).unwrap() ));
}
return ms;
} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java#L92-L101 |
141,137 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java | MultiStringDistance.doMain | final protected static void doMain(StringDistance d,String[] argv)
{
if (argv.length!=2) {
System.out.println("usage: string1 string2");
} else {
System.out.println(d.explainScore(argv[0],argv[1]));
}
} | java | final protected static void doMain(StringDistance d,String[] argv)
{
if (argv.length!=2) {
System.out.println("usage: string1 string2");
} else {
System.out.println(d.explainScore(argv[0],argv[1]));
}
} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/MultiStringDistance.java#L123-L130 |
141,138 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/ApproxNeedlemanWunsch.java | ApproxNeedlemanWunsch.getAlignedChar | public int getAlignedChar(int iMinusOne,boolean preferHigherIndices)
{
// internally to this package, strings are indexed 1...N, so
// we need to convert from the usual 0...N-1 Java convention
int i = iMinusOne+1;
int bestJ = -1;
double bestScore = -Double.MAX_VALUE;
for (int j=mat.getFirstStoredEntryInRow(i); j<=mat.getLastStoredEntryInRow(i); j++) {
if (mat.outOfRange(i,j)) log.error("out of range: "+i+","+j);
double score = mat.get(i,j);
if ((score>bestScore) || (score==bestScore && preferHigherIndices)) {
bestScore = score; bestJ = j;
}
}
// convert back to the usual 0...N-1 Java convention
return bestJ-1;
} | java | public int getAlignedChar(int iMinusOne,boolean preferHigherIndices)
{
// internally to this package, strings are indexed 1...N, so
// we need to convert from the usual 0...N-1 Java convention
int i = iMinusOne+1;
int bestJ = -1;
double bestScore = -Double.MAX_VALUE;
for (int j=mat.getFirstStoredEntryInRow(i); j<=mat.getLastStoredEntryInRow(i); j++) {
if (mat.outOfRange(i,j)) log.error("out of range: "+i+","+j);
double score = mat.get(i,j);
if ((score>bestScore) || (score==bestScore && preferHigherIndices)) {
bestScore = score; bestJ = j;
}
}
// convert back to the usual 0...N-1 Java convention
return bestJ-1;
} | [
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141,139 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getCopyright | public String getCopyright() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_copyright == null)
jcasType.jcas.throwFeatMissing("copyright", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((Header_Type)jcasType).casFeatCode_copyright);} | java | public String getCopyright() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_copyright == null)
jcasType.jcas.throwFeatMissing("copyright", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((Header_Type)jcasType).casFeatCode_copyright);} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java#L152-L155 |
141,140 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setCopyright | public void setCopyright(String v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_copyright == null)
jcasType.jcas.throwFeatMissing("copyright", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setStringValue(addr, ((Header_Type)jcasType).casFeatCode_copyright, v);} | java | public void setCopyright(String v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_copyright == null)
jcasType.jcas.throwFeatMissing("copyright", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setStringValue(addr, ((Header_Type)jcasType).casFeatCode_copyright, v);} | [
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141,141 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getTruncated | public boolean getTruncated() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_truncated == null)
jcasType.jcas.throwFeatMissing("truncated", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getBooleanValue(addr, ((Header_Type)jcasType).casFeatCode_truncated);} | java | public boolean getTruncated() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_truncated == null)
jcasType.jcas.throwFeatMissing("truncated", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getBooleanValue(addr, ((Header_Type)jcasType).casFeatCode_truncated);} | [
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141,142 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setTruncated | public void setTruncated(boolean v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_truncated == null)
jcasType.jcas.throwFeatMissing("truncated", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setBooleanValue(addr, ((Header_Type)jcasType).casFeatCode_truncated, v);} | java | public void setTruncated(boolean v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_truncated == null)
jcasType.jcas.throwFeatMissing("truncated", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setBooleanValue(addr, ((Header_Type)jcasType).casFeatCode_truncated, v);} | [
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141,143 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getAuthors | public FSArray getAuthors() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors)));} | java | public FSArray getAuthors() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors)));} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java#L196-L199 |
141,144 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setAuthors | public void setAuthors(FSArray v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setAuthors(FSArray v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors, jcasType.ll_cas.ll_getFSRef(v));} | [
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141,145 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getAuthors | public AuthorInfo getAuthors(int i) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i);
return (AuthorInfo)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i)));} | java | public AuthorInfo getAuthors(int i) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i);
return (AuthorInfo)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i)));} | [
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@return value of the element at index i | [
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141,146 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setAuthors | public void setAuthors(int i, AuthorInfo v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setAuthors(int i, AuthorInfo v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_authors == null)
jcasType.jcas.throwFeatMissing("authors", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_authors), i, jcasType.ll_cas.ll_getFSRef(v));} | [
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141,147 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getPubTypeList | public FSArray getPubTypeList() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList)));} | java | public FSArray getPubTypeList() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList)));} | [
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141,148 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setPubTypeList | public void setPubTypeList(FSArray v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setPubTypeList(FSArray v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList, jcasType.ll_cas.ll_getFSRef(v));} | [
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141,149 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getPubTypeList | public PubType getPubTypeList(int i) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i);
return (PubType)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i)));} | java | public PubType getPubTypeList(int i) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
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return (PubType)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i)));} | [
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] | indexed getter for pubTypeList - gets an indexed value - The list of the publication types, O
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@param i index in the array to get
@return value of the element at index i | [
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141,150 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setPubTypeList | public void setPubTypeList(int i, PubType v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setPubTypeList(int i, PubType v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_pubTypeList == null)
jcasType.jcas.throwFeatMissing("pubTypeList", "de.julielab.jules.types.Header");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((Header_Type)jcasType).casFeatCode_pubTypeList), i, jcasType.ll_cas.ll_getFSRef(v));} | [
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@param v value to set into the array | [
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141,151 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getLanguage | public String getLanguage() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_language == null)
jcasType.jcas.throwFeatMissing("language", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((Header_Type)jcasType).casFeatCode_language);} | java | public String getLanguage() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_language == null)
jcasType.jcas.throwFeatMissing("language", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((Header_Type)jcasType).casFeatCode_language);} | [
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@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java#L306-L309 |
141,152 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setLanguage | public void setLanguage(String v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_language == null)
jcasType.jcas.throwFeatMissing("language", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setStringValue(addr, ((Header_Type)jcasType).casFeatCode_language, v);} | java | public void setLanguage(String v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_language == null)
jcasType.jcas.throwFeatMissing("language", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setStringValue(addr, ((Header_Type)jcasType).casFeatCode_language, v);} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java#L315-L318 |
141,153 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.getDoi | public String getDoi() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_doi == null)
jcasType.jcas.throwFeatMissing("doi", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((Header_Type)jcasType).casFeatCode_doi);} | java | public String getDoi() {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_doi == null)
jcasType.jcas.throwFeatMissing("doi", "de.julielab.jules.types.Header");
return jcasType.ll_cas.ll_getStringValue(addr, ((Header_Type)jcasType).casFeatCode_doi);} | [
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] | getter for doi - gets document object identifier
@generated
@return value of the feature | [
"getter",
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java#L328-L331 |
141,154 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java | Header.setDoi | public void setDoi(String v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_doi == null)
jcasType.jcas.throwFeatMissing("doi", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setStringValue(addr, ((Header_Type)jcasType).casFeatCode_doi, v);} | java | public void setDoi(String v) {
if (Header_Type.featOkTst && ((Header_Type)jcasType).casFeat_doi == null)
jcasType.jcas.throwFeatMissing("doi", "de.julielab.jules.types.Header");
jcasType.ll_cas.ll_setStringValue(addr, ((Header_Type)jcasType).casFeatCode_doi, v);} | [
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@param v value to set into the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Header.java#L337-L340 |
141,155 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/SourcedTFIDF.java | SourcedTFIDF.getDocumentFrequency | public int getDocumentFrequency(Token token)
{
Integer df = (Integer)documentFrequency.get(token);
if (df == null) return 0;
else return df.intValue();
} | java | public int getDocumentFrequency(Token token)
{
Integer df = (Integer)documentFrequency.get(token);
if (df == null) return 0;
else return df.intValue();
} | [
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] | Get the document frequency of the token. | [
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141,156 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java | PronounFeats.setGender | public void setGender(String v) {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_gender == null)
jcasType.jcas.throwFeatMissing("gender", "de.julielab.jules.types.PronounFeats");
jcasType.ll_cas.ll_setStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_gender, v);} | java | public void setGender(String v) {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_gender == null)
jcasType.jcas.throwFeatMissing("gender", "de.julielab.jules.types.PronounFeats");
jcasType.ll_cas.ll_setStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_gender, v);} | [
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@generated
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java#L94-L97 |
141,157 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java | PronounFeats.getCase | public String getCase() {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_case == null)
jcasType.jcas.throwFeatMissing("case", "de.julielab.jules.types.PronounFeats");
return jcasType.ll_cas.ll_getStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_case);} | java | public String getCase() {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_case == null)
jcasType.jcas.throwFeatMissing("case", "de.julielab.jules.types.PronounFeats");
return jcasType.ll_cas.ll_getStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_case);} | [
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@generated
@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java#L107-L110 |
141,158 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java | PronounFeats.setCase | public void setCase(String v) {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_case == null)
jcasType.jcas.throwFeatMissing("case", "de.julielab.jules.types.PronounFeats");
jcasType.ll_cas.ll_setStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_case, v);} | java | public void setCase(String v) {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_case == null)
jcasType.jcas.throwFeatMissing("case", "de.julielab.jules.types.PronounFeats");
jcasType.ll_cas.ll_setStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_case, v);} | [
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@param v value to set into the feature | [
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141,159 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java | PronounFeats.getNumber | public String getNumber() {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_number == null)
jcasType.jcas.throwFeatMissing("number", "de.julielab.jules.types.PronounFeats");
return jcasType.ll_cas.ll_getStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_number);} | java | public String getNumber() {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_number == null)
jcasType.jcas.throwFeatMissing("number", "de.julielab.jules.types.PronounFeats");
return jcasType.ll_cas.ll_getStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_number);} | [
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] | getter for number - gets Number
@generated
@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java#L129-L132 |
141,160 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java | PronounFeats.setNumber | public void setNumber(String v) {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_number == null)
jcasType.jcas.throwFeatMissing("number", "de.julielab.jules.types.PronounFeats");
jcasType.ll_cas.ll_setStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_number, v);} | java | public void setNumber(String v) {
if (PronounFeats_Type.featOkTst && ((PronounFeats_Type)jcasType).casFeat_number == null)
jcasType.jcas.throwFeatMissing("number", "de.julielab.jules.types.PronounFeats");
jcasType.ll_cas.ll_setStringValue(addr, ((PronounFeats_Type)jcasType).casFeatCode_number, v);} | [
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@generated
@param v value to set into the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/PronounFeats.java#L138-L141 |
141,161 | BlueBrain/bluima | modules/bluima_xml/src/main/java/ch/epfl/bbp/uima/xml/archivearticle3/Th.java | Th.getHeaders | public java.util.List<Object> getHeaders() {
if (headers == null) {
headers = new ArrayList<Object>();
}
return this.headers;
} | java | public java.util.List<Object> getHeaders() {
if (headers == null) {
headers = new ArrayList<Object>();
}
return this.headers;
} | [
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141,162 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Annotation.java | Annotation.getComponentId | public String getComponentId() {
if (Annotation_Type.featOkTst && ((Annotation_Type)jcasType).casFeat_componentId == null)
jcasType.jcas.throwFeatMissing("componentId", "de.julielab.jules.types.Annotation");
return jcasType.ll_cas.ll_getStringValue(addr, ((Annotation_Type)jcasType).casFeatCode_componentId);} | java | public String getComponentId() {
if (Annotation_Type.featOkTst && ((Annotation_Type)jcasType).casFeat_componentId == null)
jcasType.jcas.throwFeatMissing("componentId", "de.julielab.jules.types.Annotation");
return jcasType.ll_cas.ll_getStringValue(addr, ((Annotation_Type)jcasType).casFeatCode_componentId);} | [
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@return value of the feature | [
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141,163 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Annotation.java | Annotation.setComponentId | public void setComponentId(String v) {
if (Annotation_Type.featOkTst && ((Annotation_Type)jcasType).casFeat_componentId == null)
jcasType.jcas.throwFeatMissing("componentId", "de.julielab.jules.types.Annotation");
jcasType.ll_cas.ll_setStringValue(addr, ((Annotation_Type)jcasType).casFeatCode_componentId, v);} | java | public void setComponentId(String v) {
if (Annotation_Type.featOkTst && ((Annotation_Type)jcasType).casFeat_componentId == null)
jcasType.jcas.throwFeatMissing("componentId", "de.julielab.jules.types.Annotation");
jcasType.ll_cas.ll_setStringValue(addr, ((Annotation_Type)jcasType).casFeatCode_componentId, v);} | [
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141,164 | BlueBrain/bluima | modules/bluima_banner/src/main/java/banner/tagging/DictionaryTagger.java | DictionaryTagger.add | public void add(String text, MentionType type)
{
MentionType previousType = entities.add(process(text), type);
if (previousType != null && !previousType.equals(type))
throw new IllegalArgumentException("Text is already associated with a different tag: " + text);
} | java | public void add(String text, MentionType type)
{
MentionType previousType = entities.add(process(text), type);
if (previousType != null && !previousType.equals(type))
throw new IllegalArgumentException("Text is already associated with a different tag: " + text);
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141,165 | BlueBrain/bluima | utils/blue_commons/src/main/java/ch/epfl/bbp/triechar/TrieCnt.java | TrieCnt.toFrequencyFile | public void toFrequencyFile(String filePath) throws IOException {
BufferedWriter writer = new BufferedWriter(new OutputStreamWriter(
new FileOutputStream(filePath), "UTF-8"));
for (TrieNodeCnt child : root.children.values()) {
child.writeFrequencies(writer, new char[0]);// recursive
}
writer.close();
} | java | public void toFrequencyFile(String filePath) throws IOException {
BufferedWriter writer = new BufferedWriter(new OutputStreamWriter(
new FileOutputStream(filePath), "UTF-8"));
for (TrieNodeCnt child : root.children.values()) {
child.writeFrequencies(writer, new char[0]);// recursive
}
writer.close();
} | [
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141,166 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/ace/EntityAttribute.java | EntityAttribute.getNames | public FSArray getNames() {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
jcasType.jcas.throwFeatMissing("names", "de.julielab.jules.types.ace.EntityAttribute");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names)));} | java | public FSArray getNames() {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
jcasType.jcas.throwFeatMissing("names", "de.julielab.jules.types.ace.EntityAttribute");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names)));} | [
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] | getter for names - gets
@generated
@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/ace/EntityAttribute.java#L86-L89 |
141,167 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/ace/EntityAttribute.java | EntityAttribute.setNames | public void setNames(FSArray v) {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
jcasType.jcas.throwFeatMissing("names", "de.julielab.jules.types.ace.EntityAttribute");
jcasType.ll_cas.ll_setRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setNames(FSArray v) {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
jcasType.jcas.throwFeatMissing("names", "de.julielab.jules.types.ace.EntityAttribute");
jcasType.ll_cas.ll_setRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names, jcasType.ll_cas.ll_getFSRef(v));} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/de/julielab/jules/types/ace/EntityAttribute.java#L95-L98 |
141,168 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/ace/EntityAttribute.java | EntityAttribute.getNames | public Name getNames(int i) {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
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if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
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141,169 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/ace/EntityAttribute.java | EntityAttribute.setNames | public void setNames(int i, Name v) {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
jcasType.jcas.throwFeatMissing("names", "de.julielab.jules.types.ace.EntityAttribute");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names), i, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setNames(int i, Name v) {
if (EntityAttribute_Type.featOkTst && ((EntityAttribute_Type)jcasType).casFeat_names == null)
jcasType.jcas.throwFeatMissing("names", "de.julielab.jules.types.ace.EntityAttribute");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names), i);
jcasType.ll_cas.ll_setRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((EntityAttribute_Type)jcasType).casFeatCode_names), i, jcasType.ll_cas.ll_getFSRef(v));} | [
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141,170 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java | TableExtractor.judgeHTMLCode | private boolean judgeHTMLCode(ArrayList<ArrayList<TextPiece>> wordsByPage) {
ArrayList<TextPiece> wordsOfPageOne = wordsByPage.get(0);
boolean isHTMLCode = true;
int i = 0;
/*
* do not have to check all words, Checking 10 words is enough
*/
while (i < Math.min(20, wordsOfPageOne.size())) {
TextPiece currentWord = wordsOfPageOne.get(i);
String thisText = currentWord.getText();
if ((thisText.length() % 2 != 0)
&& (thisText.matches("([A-Z]([A-Z]|[0-9]))*") == false)) {
isHTMLCode = false;
break;
}
i++;
}
// if (isHTMLCode)
// System.out.println("This document is coded in HTML code!");
return isHTMLCode;
} | java | private boolean judgeHTMLCode(ArrayList<ArrayList<TextPiece>> wordsByPage) {
ArrayList<TextPiece> wordsOfPageOne = wordsByPage.get(0);
boolean isHTMLCode = true;
int i = 0;
/*
* do not have to check all words, Checking 10 words is enough
*/
while (i < Math.min(20, wordsOfPageOne.size())) {
TextPiece currentWord = wordsOfPageOne.get(i);
String thisText = currentWord.getText();
if ((thisText.length() % 2 != 0)
&& (thisText.matches("([A-Z]([A-Z]|[0-9]))*") == false)) {
isHTMLCode = false;
break;
}
i++;
}
// if (isHTMLCode)
// System.out.println("This document is coded in HTML code!");
return isHTMLCode;
} | [
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141,171 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java | TableExtractor.extractFiguresFromAPage | private void extractFiguresFromAPage(ArrayList<TextPiece> linesOfAPage,
ArrayList<TextPiece> wordsOfAPage, int i, File pdfFile,
ArrayList<ArrayList<TextPiece>> linesByPage) {
if (linesOfAPage.size() > 30) { // if this page is very short, it
// usually does not contain tables
/*
* Checks for table keyword
*/
boolean figureKwdExist = false;
int prevTableEndIndex = 0;
int k = -1;
for (TextPiece t : linesOfAPage) {
k++;
String textWithoutSpace = t.getText().replace(" ", "");
TextPiece prevLine = (k == 0) ? null : linesOfAPage.get(k - 1);
if (getMatchedFigureKeyword(textWithoutSpace) != null) {
figureKwdExist = true;
String figKwd = getMatchedFigureKeyword(textWithoutSpace);
System.out.println("In page " + (i + 1) + ": "
+ textWithoutSpace);
}
}
} else {
/*
* Impossible to contain tables because of few texts in the page
*/
}
} | java | private void extractFiguresFromAPage(ArrayList<TextPiece> linesOfAPage,
ArrayList<TextPiece> wordsOfAPage, int i, File pdfFile,
ArrayList<ArrayList<TextPiece>> linesByPage) {
if (linesOfAPage.size() > 30) { // if this page is very short, it
// usually does not contain tables
/*
* Checks for table keyword
*/
boolean figureKwdExist = false;
int prevTableEndIndex = 0;
int k = -1;
for (TextPiece t : linesOfAPage) {
k++;
String textWithoutSpace = t.getText().replace(" ", "");
TextPiece prevLine = (k == 0) ? null : linesOfAPage.get(k - 1);
if (getMatchedFigureKeyword(textWithoutSpace) != null) {
figureKwdExist = true;
String figKwd = getMatchedFigureKeyword(textWithoutSpace);
System.out.println("In page " + (i + 1) + ": "
+ textWithoutSpace);
}
}
} else {
/*
* Impossible to contain tables because of few texts in the page
*/
}
} | [
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@param linesOfAPage
the list of lines of one page
@param wordsOfAPage
the list of words of one page
@param i
the current page id
@param linesByPage
the list of lines of the document | [
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141,172 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java | TableExtractor.extractOneTable | private int extractOneTable(int lineNumber,
ArrayList<TextPiece> linesOfAPage, String keyword,
TableCandidate tc, ArrayList<TextPiece> wordsOfAPage, int i,
int prevTableEndIndex, ArrayList<ArrayList<TextPiece>> linesByPage) {
TextPiece line = linesOfAPage.get(lineNumber);
if (line.getX() < 0 && line.getWidth() == 0.0) {
System.out
.println("\n This is a reversed table, currently we do not support such tables!");
lineNumber++;
tc.setValid(false);
} else {
lineNumber = findCaptionBoundary(lineNumber, linesOfAPage, tc);
if (tc.isValid()) {
tc.setPageId_thisTable(i);
// getReferenceTableTexts(tc, linesByPage);
isWideTable(tc);
Vector distinctY = new Vector();
Vector piecesEachY = new Vector();
distinctY = getDistinctSortedY(distinctY, piecesEachY,
wordsOfAPage, tc);
boolean aboveCaption = judgeCaptionLocation(linesOfAPage, tc,
distinctY, wordsOfAPage);
lineNumber = findBodyBoundary(lineNumber, linesOfAPage, tc,
aboveCaption, prevTableEndIndex);
getReferenceTableTexts(tc, linesByPage);
// System.out.println(tc.getRefText());
}
tc.setHighLevelMeta(i);
if (tc.isValid()) {
organizeCells(linesOfAPage, tc);
}
if (tc.isValid()) {
findFootnoteBeginRow(tc);
}
if (tc.isValid()) {
determineFootnoteHeading(tc);
getColumnBoundaryWithoutHeading(tc);
}
int cc = tc.getColumnNum_thisTable();
if (cc > 20) {
tc.setValid(false);
} else {
// if((cc>=2) && (tc.getMaxColumnNumber()<cc*2) ) { //if we
// treat each line as the possible table beginning without
// considering the table keyword, we need use this
if (cc >= 2) {
getTableStructure(cc, tc, wordsOfAPage);
// if (tc.isValid()) parameters.tableNum++;
} else {
tc.setEmptyMetadataStructureLevel(tc.getRows().size(), cc,
wordsOfAPage, m_docInfo);
}
}
}
return lineNumber;
} | java | private int extractOneTable(int lineNumber,
ArrayList<TextPiece> linesOfAPage, String keyword,
TableCandidate tc, ArrayList<TextPiece> wordsOfAPage, int i,
int prevTableEndIndex, ArrayList<ArrayList<TextPiece>> linesByPage) {
TextPiece line = linesOfAPage.get(lineNumber);
if (line.getX() < 0 && line.getWidth() == 0.0) {
System.out
.println("\n This is a reversed table, currently we do not support such tables!");
lineNumber++;
tc.setValid(false);
} else {
lineNumber = findCaptionBoundary(lineNumber, linesOfAPage, tc);
if (tc.isValid()) {
tc.setPageId_thisTable(i);
// getReferenceTableTexts(tc, linesByPage);
isWideTable(tc);
Vector distinctY = new Vector();
Vector piecesEachY = new Vector();
distinctY = getDistinctSortedY(distinctY, piecesEachY,
wordsOfAPage, tc);
boolean aboveCaption = judgeCaptionLocation(linesOfAPage, tc,
distinctY, wordsOfAPage);
lineNumber = findBodyBoundary(lineNumber, linesOfAPage, tc,
aboveCaption, prevTableEndIndex);
getReferenceTableTexts(tc, linesByPage);
// System.out.println(tc.getRefText());
}
tc.setHighLevelMeta(i);
if (tc.isValid()) {
organizeCells(linesOfAPage, tc);
}
if (tc.isValid()) {
findFootnoteBeginRow(tc);
}
if (tc.isValid()) {
determineFootnoteHeading(tc);
getColumnBoundaryWithoutHeading(tc);
}
int cc = tc.getColumnNum_thisTable();
if (cc > 20) {
tc.setValid(false);
} else {
// if((cc>=2) && (tc.getMaxColumnNumber()<cc*2) ) { //if we
// treat each line as the possible table beginning without
// considering the table keyword, we need use this
if (cc >= 2) {
getTableStructure(cc, tc, wordsOfAPage);
// if (tc.isValid()) parameters.tableNum++;
} else {
tc.setEmptyMetadataStructureLevel(tc.getRows().size(), cc,
wordsOfAPage, m_docInfo);
}
}
}
return lineNumber;
} | [
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@param linesOfAPage
the list of lines of one page
@param tc
the object of the table candidates
@param wordsOfAPage
the list of words of one page
@param i
the current page id
@param prevTableEndIndex
the line id of the ending place of the previous table
@param linesByPage
the list of lines of the document page
@return next line number after caption area | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java#L967-L1028 |
141,173 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java | TableExtractor.isWideTable | private void isWideTable(TableCandidate tc) {
float docWidth = m_docInfo.getMaxX() - m_docInfo.getMinX();
if ((((tc.getCaptionX() > ((docWidth - 30) / (float) 4.0)
+ m_docInfo.getMinX())) && (tc.getCaptionX() < docWidth / 2.5))
|| (tc.getCaptonEndX() - tc.getCaptionX() > docWidth
/ (float) 1.85)) {
tc.setWideTable(true);
// System.out.println();
// System.out.println("This is a wide table? " + tc.isWideTable());
} else {
// System.out.println();
// System.out.println("This is a single-doc-column table!");
}
} | java | private void isWideTable(TableCandidate tc) {
float docWidth = m_docInfo.getMaxX() - m_docInfo.getMinX();
if ((((tc.getCaptionX() > ((docWidth - 30) / (float) 4.0)
+ m_docInfo.getMinX())) && (tc.getCaptionX() < docWidth / 2.5))
|| (tc.getCaptonEndX() - tc.getCaptionX() > docWidth
/ (float) 1.85)) {
tc.setWideTable(true);
// System.out.println();
// System.out.println("This is a wide table? " + tc.isWideTable());
} else {
// System.out.println();
// System.out.println("This is a single-doc-column table!");
}
} | [
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@param tc
the object of the table candidates | [
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141,174 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java | TableExtractor.organizeCells | private void organizeCells(ArrayList<TextPiece> linesOfAPage,
TableCandidate tc) {
float captionY = linesOfAPage.get(tc.getCaptionStartLine()).getY();
float captionEndY = linesOfAPage.get(tc.getCaptionEndLine()).getEndY();
ArrayList<TextPiece> rawCells = new ArrayList<TextPiece>();
/*
* Copy & sort
*/
for (int i = tc.getBodyStartLine(); i <= tc.getBodyEndLine(); i++) {
rawCells.add(linesOfAPage.get(i));
}
Collections.sort(rawCells);
assert rawCells.size() >= 4; // due to previous check
TableRow currentRow = null; // creates first row
for (TextPiece cell : rawCells) {
/*
* Skips lines beyond caption //TODO: remove the far Y
*/
if (tc.isTopCaption() && (cell.getY() < captionY))
continue;
if (!tc.isTopCaption() && (cell.getEndY() > captionEndY))
continue;
/*
* Lines too close to each other are treated as a single line
*/
if (currentRow != null
&& cell.getY() - currentRow.getY() < m_docInfo
.getAverageLineGap() / 2.0)
currentRow.addCell(cell);
else {
/*
* Creates a new row
*/
currentRow = new TableRow();
currentRow.setY(cell.getY());
if (cell.isSuperScriptBeginning())
currentRow.setSuperScriptRow(true);
currentRow.addCell(cell);
tc.addRow(currentRow);
}
}
if (tc.getRows().size() < 2)
tc.setValid(false);
} | java | private void organizeCells(ArrayList<TextPiece> linesOfAPage,
TableCandidate tc) {
float captionY = linesOfAPage.get(tc.getCaptionStartLine()).getY();
float captionEndY = linesOfAPage.get(tc.getCaptionEndLine()).getEndY();
ArrayList<TextPiece> rawCells = new ArrayList<TextPiece>();
/*
* Copy & sort
*/
for (int i = tc.getBodyStartLine(); i <= tc.getBodyEndLine(); i++) {
rawCells.add(linesOfAPage.get(i));
}
Collections.sort(rawCells);
assert rawCells.size() >= 4; // due to previous check
TableRow currentRow = null; // creates first row
for (TextPiece cell : rawCells) {
/*
* Skips lines beyond caption //TODO: remove the far Y
*/
if (tc.isTopCaption() && (cell.getY() < captionY))
continue;
if (!tc.isTopCaption() && (cell.getEndY() > captionEndY))
continue;
/*
* Lines too close to each other are treated as a single line
*/
if (currentRow != null
&& cell.getY() - currentRow.getY() < m_docInfo
.getAverageLineGap() / 2.0)
currentRow.addCell(cell);
else {
/*
* Creates a new row
*/
currentRow = new TableRow();
currentRow.setY(cell.getY());
if (cell.isSuperScriptBeginning())
currentRow.setSuperScriptRow(true);
currentRow.addCell(cell);
tc.addRow(currentRow);
}
}
if (tc.getRows().size() < 2)
tc.setValid(false);
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@param linesOfAPage
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@param tc
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java#L1636-L1682 |
141,175 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/edu/psu/seersuite/extractors/tableextractor/extraction/TableExtractor.java | TableExtractor.getRowHeadingBasedOnCells | public void getRowHeadingBasedOnCells(TableCandidate tc) {
String rowHeadingThisTable = "";
int footnoteLineIndex = tc.getFootnoteBeginRow();
String[][] cells = tc.getCells();
// if (cells[0][0].length()==0 ) {
for (int j = 0; j < footnoteLineIndex; j++) {
if (cells[j][0].length() > 0)
rowHeadingThisTable = rowHeadingThisTable + cells[j][0] + "; ";
}
// }
rowHeadingThisTable = tc
.replaceAllSpecialChracters(rowHeadingThisTable);
tc.setHeadingRows(rowHeadingThisTable);
} | java | public void getRowHeadingBasedOnCells(TableCandidate tc) {
String rowHeadingThisTable = "";
int footnoteLineIndex = tc.getFootnoteBeginRow();
String[][] cells = tc.getCells();
// if (cells[0][0].length()==0 ) {
for (int j = 0; j < footnoteLineIndex; j++) {
if (cells[j][0].length() > 0)
rowHeadingThisTable = rowHeadingThisTable + cells[j][0] + "; ";
}
// }
rowHeadingThisTable = tc
.replaceAllSpecialChracters(rowHeadingThisTable);
tc.setHeadingRows(rowHeadingThisTable);
} | [
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141,176 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java | Dependency.getDeptype | public String getDeptype() {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_deptype == null)
jcasType.jcas.throwFeatMissing("deptype", "com.digitalpebble.rasp.Dependency");
return jcasType.ll_cas.ll_getStringValue(addr, ((Dependency_Type)jcasType).casFeatCode_deptype);} | java | public String getDeptype() {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_deptype == null)
jcasType.jcas.throwFeatMissing("deptype", "com.digitalpebble.rasp.Dependency");
return jcasType.ll_cas.ll_getStringValue(addr, ((Dependency_Type)jcasType).casFeatCode_deptype);} | [
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141,177 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java | Dependency.setDeptype | public void setDeptype(String v) {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_deptype == null)
jcasType.jcas.throwFeatMissing("deptype", "com.digitalpebble.rasp.Dependency");
jcasType.ll_cas.ll_setStringValue(addr, ((Dependency_Type)jcasType).casFeatCode_deptype, v);} | java | public void setDeptype(String v) {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_deptype == null)
jcasType.jcas.throwFeatMissing("deptype", "com.digitalpebble.rasp.Dependency");
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141,178 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java | Dependency.getSubtype | public String getSubtype() {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_subtype == null)
jcasType.jcas.throwFeatMissing("subtype", "com.digitalpebble.rasp.Dependency");
return jcasType.ll_cas.ll_getStringValue(addr, ((Dependency_Type)jcasType).casFeatCode_subtype);} | java | public String getSubtype() {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_subtype == null)
jcasType.jcas.throwFeatMissing("subtype", "com.digitalpebble.rasp.Dependency");
return jcasType.ll_cas.ll_getStringValue(addr, ((Dependency_Type)jcasType).casFeatCode_subtype);} | [
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141,179 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java | Dependency.setSubtype | public void setSubtype(String v) {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_subtype == null)
jcasType.jcas.throwFeatMissing("subtype", "com.digitalpebble.rasp.Dependency");
jcasType.ll_cas.ll_setStringValue(addr, ((Dependency_Type)jcasType).casFeatCode_subtype, v);} | java | public void setSubtype(String v) {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_subtype == null)
jcasType.jcas.throwFeatMissing("subtype", "com.digitalpebble.rasp.Dependency");
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141,180 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java | Dependency.getDep | public WordForm getDep() {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_dep == null)
jcasType.jcas.throwFeatMissing("dep", "com.digitalpebble.rasp.Dependency");
return (WordForm)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Dependency_Type)jcasType).casFeatCode_dep)));} | java | public WordForm getDep() {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_dep == null)
jcasType.jcas.throwFeatMissing("dep", "com.digitalpebble.rasp.Dependency");
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141,181 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java | Dependency.setDep | public void setDep(WordForm v) {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_dep == null)
jcasType.jcas.throwFeatMissing("dep", "com.digitalpebble.rasp.Dependency");
jcasType.ll_cas.ll_setRefValue(addr, ((Dependency_Type)jcasType).casFeatCode_dep, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setDep(WordForm v) {
if (Dependency_Type.featOkTst && ((Dependency_Type)jcasType).casFeat_dep == null)
jcasType.jcas.throwFeatMissing("dep", "com.digitalpebble.rasp.Dependency");
jcasType.ll_cas.ll_setRefValue(addr, ((Dependency_Type)jcasType).casFeatCode_dep, jcasType.ll_cas.ll_getFSRef(v));} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/Dependency.java#L161-L164 |
141,182 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/Lemma.java | Lemma.setValue | public void setValue(String v) {
if (Lemma_Type.featOkTst && ((Lemma_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.Lemma");
jcasType.ll_cas.ll_setStringValue(addr, ((Lemma_Type)jcasType).casFeatCode_value, v);} | java | public void setValue(String v) {
if (Lemma_Type.featOkTst && ((Lemma_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.Lemma");
jcasType.ll_cas.ll_setStringValue(addr, ((Lemma_Type)jcasType).casFeatCode_value, v);} | [
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141,183 | BlueBrain/bluima | modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMM.java | AbbvGapsHMM.trainCorpus | protected boolean trainCorpus(List<List<Acronym>> corpus, List<Map<String, String>> trueLabels){
boolean converge = false;
// Unsupervised
trueLabels = null;
initModelParamsAndCounters();
int n = corpus.size();
int c = 1;
Double change;
LOG.debug("Training abbreviations...");
while(!converge){
for (int i = 0; i < n; i++) {
List<Acronym> docAcronyms = corpus.get(i);
Map<String, String> docTrueLabels = null;
if(trueLabels != null)
docTrueLabels = trueLabels.get(i);
int m = docAcronyms.size();
for (int j = 0; j < m; j++) {
Acronym currAcronym = docAcronyms.get(j);
if(trueLabels != null)
expectationStep(currAcronym, docTrueLabels.get(currAcronym._shortForm));
else
expectationStep(currAcronym, null);
}
}
change = maximizationStep();
LOG.debug("step {}...",c);
c++;
if(c > MAX_ITERATIONS){
System.out.println("\n\tTraining stopped after "+(c-1)+" iterations with final change: "+change);
converge = true;
}
if(change.compareTo(CHANGE_THRESHOLD) < 0){
LOG.debug("Training converged in "+(c-1)+" iterations.");
converge = true;
}
}
saveModelParams();
return true;
} | java | protected boolean trainCorpus(List<List<Acronym>> corpus, List<Map<String, String>> trueLabels){
boolean converge = false;
// Unsupervised
trueLabels = null;
initModelParamsAndCounters();
int n = corpus.size();
int c = 1;
Double change;
LOG.debug("Training abbreviations...");
while(!converge){
for (int i = 0; i < n; i++) {
List<Acronym> docAcronyms = corpus.get(i);
Map<String, String> docTrueLabels = null;
if(trueLabels != null)
docTrueLabels = trueLabels.get(i);
int m = docAcronyms.size();
for (int j = 0; j < m; j++) {
Acronym currAcronym = docAcronyms.get(j);
if(trueLabels != null)
expectationStep(currAcronym, docTrueLabels.get(currAcronym._shortForm));
else
expectationStep(currAcronym, null);
}
}
change = maximizationStep();
LOG.debug("step {}...",c);
c++;
if(c > MAX_ITERATIONS){
System.out.println("\n\tTraining stopped after "+(c-1)+" iterations with final change: "+change);
converge = true;
}
if(change.compareTo(CHANGE_THRESHOLD) < 0){
LOG.debug("Training converged in "+(c-1)+" iterations.");
converge = true;
}
}
saveModelParams();
return true;
} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_abbreviations/src/main/java/com/wcohen/ss/abbvGapsHmm/AbbvGapsHMM.java#L262-L308 |
141,184 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/ch/epfl/bbp/uima/pdf/cleanup/LigaturesRemover.java | LigaturesRemover.remove | public String remove(String txt) {
for (Pattern p : patterns.keySet()) {
System.out.println("p: "+p);
System.out.println("b: "+txt);
txt = p.matcher(txt).replaceAll(patterns.get(p));
System.out.println("a: "+txt);
}
return txt;
} | java | public String remove(String txt) {
for (Pattern p : patterns.keySet()) {
System.out.println("p: "+p);
System.out.println("b: "+txt);
txt = p.matcher(txt).replaceAll(patterns.get(p));
System.out.println("a: "+txt);
}
return txt;
} | [
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141,185 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/DiscontinuousAnnotation.java | DiscontinuousAnnotation.getValue | public FSArray getValue() {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value)));} | java | public FSArray getValue() {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value)));} | [
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141,186 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/DiscontinuousAnnotation.java | DiscontinuousAnnotation.setValue | public void setValue(FSArray v) {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
jcasType.ll_cas.ll_setRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value, jcasType.ll_cas.ll_getFSRef(v));} | java | public void setValue(FSArray v) {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
jcasType.ll_cas.ll_setRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value, jcasType.ll_cas.ll_getFSRef(v));} | [
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141,187 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/DiscontinuousAnnotation.java | DiscontinuousAnnotation.getValue | public Annotation getValue(int i) {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value), i);
return (Annotation)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value), i)));} | java | public Annotation getValue(int i) {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value), i);
return (Annotation)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefArrayValue(jcasType.ll_cas.ll_getRefValue(addr, ((DiscontinuousAnnotation_Type)jcasType).casFeatCode_value), i)));} | [
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141,188 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/de/julielab/jules/types/DiscontinuousAnnotation.java | DiscontinuousAnnotation.setValue | public void setValue(int i, Annotation v) {
if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
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if (DiscontinuousAnnotation_Type.featOkTst && ((DiscontinuousAnnotation_Type)jcasType).casFeat_value == null)
jcasType.jcas.throwFeatMissing("value", "de.julielab.jules.types.DiscontinuousAnnotation");
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@param i index in the array to set
@param v value to set into the array | [
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141,189 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/org/apache/uima/examples/SourceDocumentInformation.java | SourceDocumentInformation.getDocumentSize | public int getDocumentSize() {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_documentSize == null)
jcasType.jcas.throwFeatMissing("documentSize", "org.apache.uima.examples.SourceDocumentInformation");
return jcasType.ll_cas.ll_getIntValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_documentSize);} | java | public int getDocumentSize() {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_documentSize == null)
jcasType.jcas.throwFeatMissing("documentSize", "org.apache.uima.examples.SourceDocumentInformation");
return jcasType.ll_cas.ll_getIntValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_documentSize);} | [
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141,190 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/org/apache/uima/examples/SourceDocumentInformation.java | SourceDocumentInformation.setDocumentSize | public void setDocumentSize(int v) {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_documentSize == null)
jcasType.jcas.throwFeatMissing("documentSize", "org.apache.uima.examples.SourceDocumentInformation");
jcasType.ll_cas.ll_setIntValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_documentSize, v);} | java | public void setDocumentSize(int v) {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_documentSize == null)
jcasType.jcas.throwFeatMissing("documentSize", "org.apache.uima.examples.SourceDocumentInformation");
jcasType.ll_cas.ll_setIntValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_documentSize, v);} | [
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141,191 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/org/apache/uima/examples/SourceDocumentInformation.java | SourceDocumentInformation.getLastSegment | public boolean getLastSegment() {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_lastSegment == null)
jcasType.jcas.throwFeatMissing("lastSegment", "org.apache.uima.examples.SourceDocumentInformation");
return jcasType.ll_cas.ll_getBooleanValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_lastSegment);} | java | public boolean getLastSegment() {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_lastSegment == null)
jcasType.jcas.throwFeatMissing("lastSegment", "org.apache.uima.examples.SourceDocumentInformation");
return jcasType.ll_cas.ll_getBooleanValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_lastSegment);} | [
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] | getter for lastSegment - gets For a CAS that represents a segment of a larger source document, this flag indicates whether this CAS is the final segment of the source document. This is useful for downstream components that want to take some action after having seen all of the segments of a particular source document.
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141,192 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/org/apache/uima/examples/SourceDocumentInformation.java | SourceDocumentInformation.setLastSegment | public void setLastSegment(boolean v) {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_lastSegment == null)
jcasType.jcas.throwFeatMissing("lastSegment", "org.apache.uima.examples.SourceDocumentInformation");
jcasType.ll_cas.ll_setBooleanValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_lastSegment, v);} | java | public void setLastSegment(boolean v) {
if (SourceDocumentInformation_Type.featOkTst && ((SourceDocumentInformation_Type)jcasType).casFeat_lastSegment == null)
jcasType.jcas.throwFeatMissing("lastSegment", "org.apache.uima.examples.SourceDocumentInformation");
jcasType.ll_cas.ll_setBooleanValue(addr, ((SourceDocumentInformation_Type)jcasType).casFeatCode_lastSegment, v);} | [
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] | setter for lastSegment - sets For a CAS that represents a segment of a larger source document, this flag indicates whether this CAS is the final segment of the source document. This is useful for downstream components that want to take some action after having seen all of the segments of a particular source document.
@generated | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/org/apache/uima/examples/SourceDocumentInformation.java#L131-L134 |
141,193 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java | WordForm.getLemma | public String getLemma() {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_lemma == null)
jcasType.jcas.throwFeatMissing("lemma", "com.digitalpebble.rasp.WordForm");
return jcasType.ll_cas.ll_getStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_lemma);} | java | public String getLemma() {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_lemma == null)
jcasType.jcas.throwFeatMissing("lemma", "com.digitalpebble.rasp.WordForm");
return jcasType.ll_cas.ll_getStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_lemma);} | [
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] | getter for lemma - gets lemma of the Form
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@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java#L86-L89 |
141,194 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java | WordForm.setLemma | public void setLemma(String v) {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_lemma == null)
jcasType.jcas.throwFeatMissing("lemma", "com.digitalpebble.rasp.WordForm");
jcasType.ll_cas.ll_setStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_lemma, v);} | java | public void setLemma(String v) {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_lemma == null)
jcasType.jcas.throwFeatMissing("lemma", "com.digitalpebble.rasp.WordForm");
jcasType.ll_cas.ll_setStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_lemma, v);} | [
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@generated
@param v value to set into the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java#L95-L98 |
141,195 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java | WordForm.getPOS | public String getPOS() {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_POS == null)
jcasType.jcas.throwFeatMissing("POS", "com.digitalpebble.rasp.WordForm");
return jcasType.ll_cas.ll_getStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_POS);} | java | public String getPOS() {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_POS == null)
jcasType.jcas.throwFeatMissing("POS", "com.digitalpebble.rasp.WordForm");
return jcasType.ll_cas.ll_getStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_POS);} | [
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141,196 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java | WordForm.setPOS | public void setPOS(String v) {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_POS == null)
jcasType.jcas.throwFeatMissing("POS", "com.digitalpebble.rasp.WordForm");
jcasType.ll_cas.ll_setStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_POS, v);} | java | public void setPOS(String v) {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_POS == null)
jcasType.jcas.throwFeatMissing("POS", "com.digitalpebble.rasp.WordForm");
jcasType.ll_cas.ll_setStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_POS, v);} | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java#L117-L120 |
141,197 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java | WordForm.getSuffix | public String getSuffix() {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_suffix == null)
jcasType.jcas.throwFeatMissing("suffix", "com.digitalpebble.rasp.WordForm");
return jcasType.ll_cas.ll_getStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_suffix);} | java | public String getSuffix() {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_suffix == null)
jcasType.jcas.throwFeatMissing("suffix", "com.digitalpebble.rasp.WordForm");
return jcasType.ll_cas.ll_getStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_suffix);} | [
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@generated
@return value of the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java#L152-L155 |
141,198 | BlueBrain/bluima | modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java | WordForm.setSuffix | public void setSuffix(String v) {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_suffix == null)
jcasType.jcas.throwFeatMissing("suffix", "com.digitalpebble.rasp.WordForm");
jcasType.ll_cas.ll_setStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_suffix, v);} | java | public void setSuffix(String v) {
if (WordForm_Type.featOkTst && ((WordForm_Type)jcasType).casFeat_suffix == null)
jcasType.jcas.throwFeatMissing("suffix", "com.digitalpebble.rasp.WordForm");
jcasType.ll_cas.ll_setStringValue(addr, ((WordForm_Type)jcasType).casFeatCode_suffix, v);} | [
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@param v value to set into the feature | [
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] | 793ea3f46761dce72094e057a56cddfa677156ae | https://github.com/BlueBrain/bluima/blob/793ea3f46761dce72094e057a56cddfa677156ae/modules/bluima_typesystem/src/main/java/com/digitalpebble/rasp/WordForm.java#L161-L164 |
141,199 | BlueBrain/bluima | modules/bluima_pdf/src/main/java/ch/epfl/bbp/uima/pdf/cr/PdfCollectionReader.java | PdfCollectionReader.serializeXMLDocument | public static void serializeXMLDocument (Document doc, Writer output) throws TransformerException {
// serialize XML document using identity transformation
Transformer trans = TransformerFactory.newInstance().newTransformer();
DOMSource source = new DOMSource(doc);
StreamResult result = new StreamResult(output);
trans.transform(source, result);
} | java | public static void serializeXMLDocument (Document doc, Writer output) throws TransformerException {
// serialize XML document using identity transformation
Transformer trans = TransformerFactory.newInstance().newTransformer();
DOMSource source = new DOMSource(doc);
StreamResult result = new StreamResult(output);
trans.transform(source, result);
} | [
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