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# coding: utf-8 import sys, os sys.path.append(os.pardir) # 부모 디렉터리의 파일을 가져올 수 있도록 설정 import numpy as np from collections import OrderedDict from Common.layers import * from Common.gradient import numerical_gradient class MultiLayerNetExtend: """완전 연결 다층 신경망(확장판) 가중치 감소, 드롭아웃, 배치 정규화 구현 Parameters ---...
""" This page is in the table of contents. Cool is a craft tool to cool the shape. Cool works well with a stepper extruder, it does not work well with a DC motor extruder. If enabled, before each layer that takes less then "Minimum Layer Time" to print the tool head will orbit around the printed area for 'Minimum Lay...
import distutils.spawn import logging import re import subprocess from time import time, sleep from targetd.main import TargetdError pools = [] pools_fs = dict() zfs_cmd = "" zfs_enable_copy = False ALLOWED_DATASET_NAMES = re.compile('^[A-Za-z0-9][A-Za-z0-9_.\-]*$') class VolInfo(object): """ Just to ha...
from django.db import models from dt.fields import AddedDateTimeField, ModifiedDateTimeField from djangosphinx.models import SphinxSearch class Modifier(models.Model): city = models.CharField(max_length=25, blank=True, null=True) data = models.TextField() def __unicode__(self): return self.data class Radius(m...
# -*- coding: utf-8 -*- import decimal import logging from flask_wtf import FlaskForm from flask_wtf.file import FileField from wtforms import ( BooleanField, DecimalField, Field, HiddenField, IntegerField, SelectField, SelectMultipleField, StringField, SubmitField, TextField, ...
import nose.tools from bs4 import BeautifulSoup from ckan.tests import helpers from common import create_fixtures eq = nose.tools.assert_equals class TestOrgPage(helpers.FunctionalTestBase): def test_search_parent_including_children(self): parent_org, child_org, parent_dataset, child_dataset = \ ...
#!/usr/bin/env python def configuration(parent_package='',top_path=None): import numpy import os import ConfigParser from numpy.distutils.misc_util import Configuration from numpy.distutils.system_info import get_info, NotFoundError # Read relevant NLPy-specific configuration options. nlpy...
import argparse import os import sys import unittest try: # py2 from StringIO import StringIO except ImportError: # py3 from io import StringIO from swift_build_support.arguments import ( action as argaction, type as argtype, ) class ArgumentsTypeTestCase(unittest.TestCase): def test_boo...
from graphql.core.execution import execute from graphql.core.language.parser import parse from graphql.core.type import ( GraphQLSchema, GraphQLField, GraphQLObjectType, GraphQLInterfaceType, GraphQLUnionType, GraphQLList, GraphQLString, GraphQLBoolean ) class Dog(object): def __in...
from copy import deepcopy from api import Volume from tests.conftest import dummy_ready_volume class TestVolume: def test_delete_case(self, mocker, volume_manager, p_volume_manager_by_id, p_volume_manager_update, p_volume_manager_get_lock, flask_app): volume = deepcopy(dummy_ready...
#!/usr/bin/env python # -*- coding: utf-8 -*- import urllib2 import urllib import json from array import * endpointUrl = "https://api.annomarket.com/online-processing/item/" shopItemId = "2" keyId = "<your-credentials-here>" password = "<your-credentials-here>" # create a password manager password_mgr = urllib2.HTTPP...
""" generate a single-file self-contained version of py.test """ import py def find_toplevel(name): for syspath in py.std.sys.path: base = py.path.local(syspath) lib = base/name if lib.check(dir=1): return lib mod = base.join("%s.py" % name) if mod.check(file=1):...
"""Message actions.""" __all__ = [ 'Action', 'FilterAction', ] from enum import Enum class Action(Enum): hold = 0 reject = 1 discard = 2 accept = 3 defer = 4 class FilterAction(Enum): hold = 0 reject = 1 discard = 2 accept = 3 defer = 4 forw...
# -*- coding: utf-8 -*- from __future__ import with_statement from fabric.api import cd, settings, env, abort, local, run, get, put from fabric.contrib.console import confirm import tempfile import time import os import sys from datetime import datetime env.hosts = ['23.253.52.12'] env.user = 'opm' code_dir = '/sr...
from __future__ import absolute_import, division, print_function, unicode_literals import pytest ; pytest from bokeh.util.api import INTERNAL, PUBLIC ; INTERNAL, PUBLIC from bokeh.util.testing import verify_api ; verify_api #----------------------------------------------------------------------------- # Imports #---...
""" Support for interface with an Aquos TV. For more details about this platform, please refer to the documentation at https://home-assistant.io/components/media_player.aquostv/ """ import logging import voluptuous as vol from homeassistant.components.media_player import ( MediaPlayerDevice, PLATFORM_SCHEMA) fro...
""" TXs a waveform (either from a file, or a sinusoid) in a frequency-hopping manner. """ import time import numpy import argparse import pmt from gnuradio import gr from gnuradio import blocks from gnuradio import uhd def setup_parser(): """ Setup the parser for the frequency hopper. """ parser = argparse.Ar...
from PyQt4.QtGui import QColor from qgis.core import QgsSymbolV2, QgsRendererRangeV2, QgsGraduatedSymbolRendererV2 class VectorSymbolizer(): symbology = "StreamTemp_Vector" def symbolize(self): # define ranges: label, lower value, upper value, color name temp_cat = ( ('0-10', 0.0,...
import movespy.utils import movespy.trajectory import os.path def getClassAttr(output_folder): '''Parses the XML parameters files in a TransModeler simulation output folder. Returns a dictionary keyed by Class ID. Values are dictionaries with keys for class_name, and mass_tonnes. ''' ...
''' Summer actors takes any number of input channels and adds the signals on each channel to produce a single output signal. The semantics of the addition depend on the kind of signals that are being added. @author: Allan McInnes @author: Brian Thorne ''' import logging #logging.basicConfig(level=logging.DEBUG) from n...
""" Routers for nested resources. Example: # urls.py from rest_framework_nested import routers router = routers.SimpleRouter() router.register(r'domains', DomainViewSet) domains_router = routers.NestedSimpleRouter(router, r'domains', lookup='domain') domains_router.register(r'nameservers', ...
import numpy as N def hess_plot(xdata, ydata, weight, xmin, xmax, nxbins, ymin, ymax, nybins, pmax = 1.0, pmin = 0.01): #x = stellar mass #y = gas fraction dx = (xmax - xmin) /nxbins mbin = xmin + (N.arange(nxbins))*dx + dx/2.0 dy = (ymax - ymin) ...
import math import os import numpy as np from scipy.spatial.distance import cdist import bpy from bpy.props import * import os from mathutils import Vector def no_flyover(mesh): """ Compute a static camera position Parameters ---------- mesh (obj) A DTMRenderContext (terr...
import subprocess import paramiko from paramiko import client # Devices TV = 1 AUDIO = 2 # Codes POWER_ON = 1 POWER_OFF = 2 device_map = { AUDIO : 'Audio', TV : 'VizioTv', } code_map = { POWER_ON : 'KEY_POWER', POWER_OFF : 'KEY_POWER2', } class LircCommander(object): instance = None def Setu...
= MPD play daemon = == ncmpcpp == emerge mpd ncmpcpp == configuration == sed '/^#/d;/^$/d' /etc/mpd.conf {{{ music_directory "/mnt/play/MUSIC" playlist_directory "/var/lib/mpd/playlists" db_file "/var/lib/mpd/database" log_file "/var/lib/mpd/log" pid...
""" Unit tests for :func:`iris.fileformats.pp_load_rules._reduce_points_and_bounds`. """ from __future__ import (absolute_import, division, print_function) from six.moves import (filter, input, map, range, zip) # noqa # Import iris.tests first so that some things can be initialised before # importing anything else....
import paddle import paddle.fluid as fluid import math __all__ = ['InceptionV4'] train_parameters = { "input_size": [3, 224, 224], "input_mean": [0.485, 0.456, 0.406], "input_std": [0.229, 0.224, 0.225], "learning_strategy": { "name": "piecewise_decay", "batch_size": 256, "epoc...
""" compare_fields.py Driver function that creates two ARTView displays for comparison. """ import os import sys from ..core import Variable, QtWidgets, QtCore from ..components import RadarDisplay, Menu, LinkSharedVariables from ._common import _add_all_advanced_tools, _parse_dir, _parse_field def run(DirIn=None, ...
# -*- coding: utf-8 -*- from __future__ import unicode_literals import unittest from mixpanel_jql import JQL, raw, Events, Reducer class TestAccessorOnlyTransformations(unittest.TestCase): def setUp(self): self.query = JQL(api_secret=None, events=Events()) def _test(self, manipulator, expected_fu...
""" Defines the functions corresponding to each of the subcommands """ import os.path import pickle import sys import time import greg.classes as c import greg.aux_functions as aux try: # lxml is an optional dependency for pretty printing opml export from lxml import etree as ET lxmlexists = True except Impo...
# -*- coding: utf-8 -*- """All exceptions used in the Cookiecutter code base are defined here.""" class CookiecutterException(Exception): """ Base exception class. All Cookiecutter-specific exceptions should subclass this class. """ class NonTemplatedInputDirException(CookiecutterException): "...
from __future__ import absolute_import from __future__ import division from __future__ import print_function import time import numpy as np import pytest import ray from ray.experimental.serve.examples.adder import ScalerAdder, VectorizedAdder from ray.experimental.serve.examples.halt import SleepCounter, SleepOnFir...
from django.conf.urls import patterns, include, url from .views import * from django.conf import settings urlpatterns=patterns('', url(r'^$' ,login_required(home.as_view()), name='index'), url(r'^home/$' ,login_required(home.as_view()), name='home'), url(r'^gestionusuarios/registrar/$', RegistrarUsuario.as_view(), ...
DATE_FORMAT = 'j. F Y' TIME_FORMAT = 'G:i:s' DATETIME_FORMAT = 'j. F Y G:i:s' YEAR_MONTH_FORMAT = 'F Y' MONTH_DAY_FORMAT = 'j. F' SHORT_DATE_FORMAT = 'd.m.Y' SHORT_DATETIME_FORMAT = 'd.m.Y G:i:s' FIRST_DAY_OF_WEEK = 1 # Monday # The *_INPUT_FORMATS strings use the Python strftime format syntax, # see http://...
#!/usr/bin/env python '''Demo to turn detected faces into TFs at 1m distance''' import rospy from opencv_apps.msg import FaceArrayStamped from geometry_msgs.msg import PoseStamped import tf import math FOV_VERT = math.radians(58) FOV_HORIZ = math.radians(87) RES_VERT = 480. RES_HORIZ = 640. class Face2TF: def __...
""" Given a string which contains only letters. Sort it by lower case first and upper case second. Note It's not necessary to keep the original order of lower-case letters and upper case letters. Example For "abAcD", a reasonable answer is "acbAD" """ __author__ = 'Danyang' class Solution: def sortLetters(self,...
from abc import ABC from abc import abstractmethod from copy import deepcopy class KernelWriterBase(ABC): def __init__(self): super().__init__() self.state = {} self.endLine = "\n" self.getGroupIdStr = "hc_get_group_id" self.getNumGroupsStr = "hc_get_num_groups" self.getLocalIdStr = "hc_...
# -*- coding: utf-8 -*- from forms import EntregaMonografiaRevisadaForm, EntregaMonografiaOriginalForm from models import EntregaMonografiaRevisada, EntregaMonografiaOriginal from django.http import HttpResponse, HttpResponseRedirect from django.contrib import auth, messages from django.shortcuts import render_to_resp...
""" Support for UDP socket based sensors. For more details about this platform, please refer to the documentation at https://home-assistant.io/components/sensor.udp/ """ import logging import socket import select import voluptuous as vol from homeassistant.components.sensor import PLATFORM_SCHEMA from homeassistant....
import json import cherrypy import logging import sensorPlugins import importlib logging.basicConfig(format='%(levelname)s:%(asctime)s %(message)s', level=logging.INFO) class Plugins: exposed = True def GET(self, **kwargs): logging.debug('GET request to plugins.') cherrypy.response.headers[...
#!/usr/bin/env python # -*- coding:utf-8 -*- """ update redis query string of all leancloud class, run every 24 hours. hset class_name:width page_num query_json_string. """ import _env import lean_classname import time from config import redis_config from config.img_config import Img from redis import Redis from lib....
"""Tests for various Frosted behavior.""" from __future__ import absolute_import, division, print_function, unicode_literals from sys import version_info import pytest from frosted import messages as m from pies.overrides import * from .utils import flakes def test_duplicateArgs(): flakes('def fu(bar, bar): p...
import logging import sys import os import platform import shutil import string import zipfile import re import ctypes from . import config from .osdriver import get_physical_disk_number, wmi_get_drive_info, \ log, resource_path, multibootusb_host_dir def scripts_dir_path(): return os.path.dirname(os.path.r...
# -*- coding: utf-8 -*- from __future__ import unicode_literals from django.db import models, migrations class Migration(migrations.Migration): dependencies = [ ('contenttypes', '0002_remove_content_type_name'), ] operations = [ migrations.CreateModel( name='Account', ...
import numpy as np from .utils import _create_info, _set_tmin, _create_events, \ _create_event_metadata, _validate_ft_struct from .. import RawArray from ...epochs import EpochsArray from ...evoked import EvokedArray def read_raw_fieldtrip(fname, info, data_name='data'): """Load continuous (raw) data from a ...
import unittest from blinkpy.common.net.web_test_results import WebTestResults class WebTestResultsTest(unittest.TestCase): # The real files have no whitespace, but newlines make this much more readable. example_full_results_json = """ADD_RESULTS({ "tests": { "fast": { "dom": { ...
""" Unit tests for the Assessment object """ from sqlalchemy.orm import attributes from ggrc import db from ggrc.models import Assessment from ggrc.models import mixins from ggrc.models import object_document from ggrc.models import object_person from ggrc.models import relationship from ggrc.models import track_obje...
__revision__ = "__FILE__ __REVISION__ __DATE__ __DEVELOPER__" """ Verify the mem --format=gnuplot option. """ import TestSCons_time test = TestSCons_time.TestSCons_time() test.fake_logfile('foo-000-0.log', 0) test.fake_logfile('foo-000-1.log', 0) test.fake_logfile('foo-000-2.log', 0) test.fake_logfile('foo-001-0.l...
#coding:utf-8 import json import re from django.http import HttpResponse # 数据库接口导入 from hbh import models as hbh_models info = { 'fail': '失败', 'error': '错误', 'Success': '成功' } # 注册用户 def addUser(request): if request.method == "POST": data = request.POST if hbh_models....
from opus_core.variables.variable import Variable from numpy import float32 class income_times_2(Variable): """A variable for unit tests. """ _return_type="float32" def dependencies(self): return ['opus_core.test_agent.income'] def compute(self, dataset_pool): val...
import logging import argparse import sys import os import subprocess import multiprocessing import pkg_resources import subprocess import itertools import signal import shutil import random import string from math import floor, log, ceil from collections import namedtuple from pbcore.io.FastaIO import FastaReader fr...
# -*- coding: utf-8 -*- from flask import Flask, render_template, url_for, request, json, g, redirect, request, abort from hashids import Hashids import random import os import countsyl import click from pprint import pprint app = Flask(__name__) hashids = Hashids() SYL_1="5" SYL_2="8" SYL_3="5" BOOK_META="books/book...
from __future__ import unicode_literals import frappe import frappe.defaults from frappe.core.doctype.data_import.data_import import export_csv import unittest import os class TestDataImportFixtures(unittest.TestCase): def setUp(self): pass #start test for Client Script def test_Custom_Script_fixture_simple(sel...
#!/usr/bin/env python # -*- coding: utf-8 -*- import binascii import hashlib import os import shutil import sys def concat(file_paths, file): """ Concatenates contents in file_paths list to a file-like object, `file` """ for file_path in file_paths: copy_file(file_path, file) def copy_file(...
from pybrain.rl.agents.linearfa import LinearFA_Agent from pybrain.rl.experiments import EpisodicExperiment from environment import Environment from tasks import LinearFATileCoding3476BalanceTask from training import LinearFATraining_setAlpha from learners import SARSALambda_LinFA_setAlpha # learning rate applied to ...
"""The app module, containing the app factory function.""" import os.path from flask import Flask from core.database import init_engine from core.extensions import db, cors, migrate from ibackend.config import ProdConfig from ibackend.extensions import set_global_api_blueprint def create_app(api_blueprint, config_...
import os import sys import click import pandas as pd from skbio import io def sample_genes(ortho_groups_fp, min_taxa_cutoff=10.0): """ Select gene families (orthologous groups) from OrthoFinder result Parameters ---------- ortho_groups_fp : str orthologous groups definition ...
# Definition for singly-linked list. class ListNode(object): def __init__(self, x): self.val = x self.next = None class Solution(object): def oddEvenList(self, head): """ :type head: ListNode :rtype: ListNode """ if head is None: return head...
from __future__ import unicode_literals import warnings from django.conf.urls import url, patterns, include from django.core.exceptions import ImproperlyConfigured from django.core.urlresolvers import reverse from django.http import HttpResponse, HttpResponseBadRequest from tastefulpy.exceptions import NotRegistered, B...
#!/usr/bin/env python3 """ Python class example. """ # The start of it all: # Fill it all in here. class TextWrapper: def __init__(self, text): self.text = text def render(self, file_out, current_ind=""): file_out.write(current_ind + self.text) class Element: tag = "html" indent = ...
from .. import signals # NOQA :signals import needs to be here so signals get registered import logging import collections from django.conf import settings from django.contrib.contenttypes.models import ContentType from django.core.urlresolvers import reverse from django.template import Context from django.contrib.a...
"""Helper functions for dealing with Cloud Datastore's Protobuf API. The non-private functions are part of the API. """ import calendar import datetime from google.protobuf.internal.type_checkers import Int64ValueChecker import pytz import six from gcloud.datastore import _datastore_v1_pb2 as datastore_pb from gclo...
from bson import DBRef, SON from base import (BaseDict, BaseList, TopLevelDocumentMetaclass, get_document) from fields import (ReferenceField, ListField, DictField, MapField) from connection import get_db from queryset import QuerySet from document import Document class DeReference(object): def __call__(self, i...
from lstree.nodes.node import Node __author__ = 'Shreyas Kulkarni' __email__ = '<EMAIL>' class FileNode(Node): def empty(self): return False
import tensorflow as tf class GcnBiasAndFeatureGates: def __init__(self, biases, features, transform_1, transform_2, l1_scale=0.0): self.features = features self.biases = biases self.transform_1 = transform_1 self.transform_2 = transform_2 self.l1_scale = 0.0 self...
""" Bunch is a dictionary that supports attribute-style access. The only difference with Bunch(look at https://github.com/dsc/bunch) is that this library normalizes keys into attribute style notation. >>> a = {'a': 1} >>> a['a'] 1 >>> b = bunchify(a) >>> b.a 1 """ import re import bunch as _bun...
"""WebMessage web interface""" __revision__ = "$Id$" __lastupdated__ = """$Date$""" from invenio.config import CFG_SITE_SECURE_URL, CFG_SITE_URL, CFG_ACCESS_CONTROL_LEVEL_SITE from invenio.webuser import getUid, isGuestUser, page_not_authorized, collect_user_info from invenio.webmessage import perform_request_displa...
import os import shutil import getpass from scp import SCPClient import paramiko #Variable location = "/etc/ocsinventory-server" directory = "/usr/share/ocsinventory-reports/ocsreports/extensions/" plugins = [] selection = -1 #Get directory where are the plugins print("Where is the plugins location [" + directory + "...
# code for mongodb from flask import Flask, jsonify, request, json, abort, session, redirect, render_template, \ url_for, Response, flash from flask_pymongo import PyMongo from flask_restplus import Resource from bson import json_util from bson.objectid import ObjectId from models import * from jinja2 import * a...
from msrest.service_client import ServiceClient from msrest import Serializer, Deserializer from msrestazure import AzureConfiguration from .version import VERSION from .operations.storage_accounts_operations import StorageAccountsOperations from .operations.usage_operations import UsageOperations from . import models ...
#!/usr/bin/env python3 import os import glob import time import flask import qrcode import urllib.parse from flask import Flask from flask import render_template from flask import request from flask import send_from_directory from config import uploadr as config from werkzeug.utils import secure_filename app = Flask(_...
import urllib from xml.etree import ElementTree from xl import common import logging logger = logging.getLogger(__name__) # TODO: The 'new' API doesn't allow general queries, only allows exact # matching.. if they fix it, we'll fix it. >_> search_url = 'http://librivox.org/api/feed/audiobooks/?title=' class Book():...
from __future__ import absolute_import, division, print_function __metaclass__ = type ANSIBLE_METADATA = { 'metadata_version': '1.1', 'status': ['preview'], 'supported_by': 'community' } try: from pyVmomi import vim except ImportError: pass from ansible.module_utils.basic import AnsibleModule fro...
import cPickle as pickle import irr import argparse import numpy as np #-- Parse command-line arguments PARSER = argparse.ArgumentParser(description='Estimate the tilt and orientation factor (TOF) for the annual insolation.') PARSER.add_argument('-lat', '--latitude', help='latitude of the place', required=False) PARS...
import base64 import os from google.appengine.ext import webapp from google.appengine.ext.webapp import template from google.appengine.ext.webapp.util import run_wsgi_app class IndexPage(webapp.RequestHandler): def get(self): template_values = { } path = os.path.join(os.path.dirname(__file__), 'in...
from celery import shared_task import requests import logging from django.conf import settings import base64 logger = logging.getLogger(__name__) @shared_task def get_character_id_from_sso_code(code): #first we need to exchange the code for a token client_id = settings.SSO_CLIENT_ID client_sec...
""" Tests the setup.py script by running ``python setup.py install`` in a temporarily activated virtual environment. """ import os import re import shutil import subprocess import sys import unittest import urllib2 import version VENV_NAME = '_e' BASE_PATH = os.path.abspath(os.path.dirname(__file__)) VENV_PATH = o...
from nmigen import Signal from nmigen_cfu import SimpleElaboratable class Delayer(SimpleElaboratable): """Delays an input Signal via a shift register. Parameters ---------- cycles: int Number of cycles to delay the signal Public Interface --------------- input: Signal() in ...
"""Commands to import or export the current command stack to or from a file.""" import click import unsync from unsync.core import NestedUnsyncCommands import pickle @unsync.command() @click.option('--output-file', '-o', type=click.Path(dir_okay=False, readable=True, resolve_path=True), help='File that the command s...
import argparse import centinel import centinel.models import centinel.views import config import logging from logging.handlers import RotatingFileHandler import sys if (2, 7, 9) > sys.version_info: print ("WARNING: Python is older than 2.7.9, " "using older SSL version. This is " "incompatib...
""" Run with: sudo python ./setup.py install """ import os import sys import warnings import io if sys.version_info[:2] < (2, 7) or (sys.version_info[:1] == 3 and sys.version_info[:2] < (3, 5)): raise Exception('This version of gensim needs Python 2.7, 3.5 or later.') import ez_setup ez_setup.use_setuptools() f...
from django.conf import settings from django import template # Depending on your django version, `reverse` and `NoReverseMatch` has been moved. # From django 2.0 they've been moved to `django.urls` try: from django.urls import reverse, NoReverseMatch except ImportError: from django.core.urlresolvers import rev...
#!/usr/bin/env python2.7 import os import sys args = sys.argv [1:] linecount = int(10) chunk_size=8 def tail(filehandle, offset=(int(chunk_size * -1)), whence=int(2), data=str()): length = len(data) if length == os.path.getsize(filename): return data filehandle.seek(offset,whence) data = filehandle.read(...
from __future__ import print_function import string import logging import curses # Needed for colours back = curses.COLOR_WHITE front = curses.COLOR_BLACK # Switch for white backgrounds ###back = curses.COLOR_BLACK ###front = curses.COLOR_WHITE COLORS = [ # Color combinations, (ID#, foreground, background) ...
# -*- coding: utf-8 -*- r""" The :mod:`pygsp.optimization` module provides tools to solve convex optimization problems on graphs. """ from pygsp import utils logger = utils.build_logger(__name__) def _import_pyunlocbox(): try: from pyunlocbox import functions, solvers except Exception as e: ...
import readline from jedi import utils from .helpers import TestCase, cwd_at class TestSetupReadline(TestCase): class NameSpace(): pass def __init__(self, *args, **kwargs): super(type(self), self).__init__(*args, **kwargs) self.namespace = self.NameSpace() utils.setup_readli...
import os from testtools import ExpectedException from testtools import TestCase from testscenarios.testcase import TestWithScenarios from yaml.composer import ComposerError from jenkins_jobs import builder from tests.base import get_scenarios, JsonTestCase, YamlTestCase from tests.base import LoggingFixture def _ex...
#!/usr/bin/env python """Prepare truth set of crowd sourced CNVs from GiaB samples. http://biorxiv.org/content/early/2016/12/13/093526 """ import requests from bcbio.variation import vcfutils url = "http://biorxiv.org/content/biorxiv/suppl/2016/12/13/093526.DC1/093526-3.txt" out_base = "NA24385-crowd-dels-%s.bed" ...
import pandas as pd import sys, os import tarfile import gzip class ValidatePhoSimCatalogs(object): MegaByte = 1024*1024 def __init__(self, obsHistIDValues, prefix='InstanceCatalogs/phosim_input_'): self.obsHistIDValues = obsHistIDValues self.prefix=prefix @classmetho...
title = "Combo boxes" description = """ The ComboBox widget allows to select one option out of a list. The ComboBoxEntry additionally allows the user to enter a value that is not in the list of options. How the options are displayed is controlled by cell renderers. """ from gi.repository import Gtk, Gdk, GdkPixbuf,...
# -*- coding: utf-8 -*- from __future__ import absolute_import import os import subprocess import re from powerline.theme import requires_segment_info from powerline.bindings.vim import buffer_name def get_git_status(): has_pending_commits = True has_untracked_files = False detached_head = False d...
''' Created on August 23, 2019 This file is subject to the terms and conditions defined in the file 'LICENSE.txt', which is part of this source code package. @author: David Moss ''' from intelligence.intelligence import Intelligence import utilities.utilities as utilities import utilities.analytics as analytics imp...
import os from translate.storage.versioncontrol import GenericRevisionControlSystem from translate.storage.versioncontrol import run_command, prepare_filelist def is_available(): """check if git is installed""" exitcode, output, error = run_command(["git", "--version"]) return exitcode == 0 class git(G...
import os import re import phonenumbers from gsxws.core import validate from django.conf import settings from django.core.exceptions import ValidationError from django.utils.translation import ugettext as _ def phone_validator(val): try: phonenumbers.parse(val, settings.INSTALL_COUNTRY) except phonenu...
#!/usr/bin/python import sys import re def main(): if (len(sys.argv)!=3): print "Usage: antlrpp.py Grammar.g Grammar_pure.g" return inf = open(sys.argv[1],"r") out = open(sys.argv[2],'w') words = [] for line in inf.readlines(): x = line.strip().split() #print x words.extend(x) line = '' for w in words...
from datetime import time import re def parse_time(arg): """ Returns datetime.time object based on parsed argument string Only accepts in the following format: [xx]:[yy] -> am/pm left out, use military time [xx]-> am/pm left out, use military time [xx]:[yy][am/pm] [xx][am/pm] -> xx is eva...
from twilio.rest.resources.imports import httplib2 from twilio.rest.resources.imports import socks from twilio.rest.resources.imports import PROXY_TYPE_HTTP from twilio.rest.resources.imports import PROXY_TYPE_SOCKS4 from twilio.rest.resources.imports import PROXY_TYPE_SOCKS5 class Connection(object): '''Class fo...
def isqrt(n): """Calculate the floor of the square root of a natural number. Uses a binary search to find the integer square root, and so runs logarithmically. """ a, b = 0, n+1 while b - a != 1: mid = (a + b) // 2 if mid*mid <= n: a = mid else: b = mid return a def perfect_square(n): """Calculate i...
# coding=utf-8 from django.conf import settings from django.db import models from django.utils.encoding import force_text from django.utils.translation import ugettext_lazy as _ from django.utils.translation.trans_real import get_supported_language_variant from pybb import defaults, util from pybb.compat import get_im...
# -*- coding: utf-8 -*- from PyQt5.QtCore import Qt from cadnano.proxies.cnenum import ( ItemEnum, EnumType ) from .cnoutlineritem import ( CNOutlinerItem, RootPartItem, NAME_COL, VISIBLE_COL, COLOR_COL, LEAF_FLAGS ) from cadnano.views.abstractitems import AbstractVirtualHelixItem from ...