repo stringlengths 2 99 | file stringlengths 13 225 | code stringlengths 0 18.3M | file_length int64 0 18.3M | avg_line_length float64 0 1.36M | max_line_length int64 0 4.26M | extension_type stringclasses 1
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netcdf4-python | netcdf4-python-master/test/tst_stringarr.py | from netCDF4 import Dataset, stringtochar, chartostring
import random, numpy, string
import unittest
import os
from numpy.testing import assert_array_equal, assert_array_almost_equal
def generateString(length, alphabet=string.ascii_letters + string.digits + string.punctuation):
return(''.join([random.choice(alphab... | 3,409 | 36.472527 | 95 | py |
netcdf4-python | netcdf4-python-master/test/tst_unlimdim.py | import sys
import unittest
import os
import tempfile
import numpy as np
from numpy.random.mtrand import uniform
from numpy.testing import assert_array_equal, assert_array_almost_equal
import netCDF4
# test creating variables with unlimited dimensions,
# writing to and retrieving data from such variables.
# create an ... | 2,210 | 32 | 91 | py |
netcdf4-python | netcdf4-python-master/test/tst_masked6.py | import unittest
import os
import tempfile
import numpy as np
from numpy import ma
from numpy.testing import assert_array_almost_equal
from netCDF4 import Dataset
# Test automatic conversion of masked arrays (set_always_mask())
class SetAlwaysMaskTestBase(unittest.TestCase):
"""Base object for tests checking the... | 3,641 | 25.583942 | 96 | py |
netcdf4-python | netcdf4-python-master/test/tst_masked3.py | import unittest
import os
import tempfile
import numpy as np
from numpy import ma
from numpy.testing import assert_array_almost_equal
from netCDF4 import Dataset, default_fillvals
# Test automatic conversion of masked arrays (set_auto_mask())
class SetAutoMaskTestBase(unittest.TestCase):
"""Base object for test... | 5,568 | 26.569307 | 106 | py |
netcdf4-python | netcdf4-python-master/test/tst_slicing.py | from netCDF4 import Dataset
from numpy.random import seed, randint
from numpy.testing import assert_array_equal, assert_equal,\
assert_array_almost_equal
import tempfile, unittest, os, random, sys
import numpy as np
file_name = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
xdim=9; ydim=10; zdim=11
#seed... | 10,135 | 35.992701 | 87 | py |
netcdf4-python | netcdf4-python-master/test/tst_compression_szip.py | from numpy.random.mtrand import uniform
from netCDF4 import Dataset
from numpy.testing import assert_almost_equal
import os, tempfile, unittest, sys
ndim = 100000
filename = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
datarr = uniform(size=(ndim,))
def write_netcdf(filename,dtype='f8'):
nc = Data... | 1,716 | 34.770833 | 183 | py |
netcdf4-python | netcdf4-python-master/test/tst_masked4.py | import unittest
import os
import tempfile
import numpy as np
from numpy import ma
from numpy.testing import assert_array_almost_equal
from netCDF4 import Dataset, default_fillvals
# Test use of valid_min/valid_max/valid_range in generation of masked arrays
class SetValidMinMax(unittest.TestCase):
def setUp(self... | 4,136 | 32.096 | 121 | py |
netcdf4-python | netcdf4-python-master/test/tst_compression_zstd.py | from numpy.random.mtrand import uniform
from netCDF4 import Dataset
from numpy.testing import assert_almost_equal
import os, tempfile, unittest, sys
ndim = 100000
filename1 = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
filename2 = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
array = un... | 2,133 | 35.793103 | 125 | py |
netcdf4-python | netcdf4-python-master/test/tst_masked5.py | import unittest
import os
import tempfile
import numpy as np
from numpy import ma
from numpy.testing import assert_array_equal
from netCDF4 import Dataset, __netcdf4libversion__
# Test use of vector of missing values.
class VectorMissingValues(unittest.TestCase):
def setUp(self):
self.testfile = tempfi... | 1,787 | 25.294118 | 84 | py |
netcdf4-python | netcdf4-python-master/test/tst_grps2.py | import sys
import unittest
import os
import tempfile
import netCDF4
# test implicit group creation by using unix-like paths
# in createVariable and createGroups (added in 1.1.8).
# also test Dataset.__getitem__, also added in 1.1.8.
FILE_NAME = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
class Group... | 1,334 | 29.340909 | 73 | py |
netcdf4-python | netcdf4-python-master/test/tst_vlen.py | import sys
import unittest
import os
import tempfile
from netCDF4 import Dataset
import numpy as np
from numpy.testing import assert_array_equal
FILE_NAME = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
VL_NAME = 'vlen_type'
VL_BASETYPE = np.int16
DIM1_NAME = 'lon'
DIM2_NAME = 'lat'
nlons = 5; nlats = 5... | 7,675 | 32.519651 | 86 | py |
netcdf4-python | netcdf4-python-master/test/tst_compression_blosc.py | from numpy.random.mtrand import uniform
from netCDF4 import Dataset
from numpy.testing import assert_almost_equal
import os, tempfile, unittest, sys
ndim = 100000
iblosc_shuffle=2
iblosc_complevel=4
filename = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
datarr = uniform(size=(ndim,))
def write_netcdf... | 4,029 | 47.554217 | 125 | py |
netcdf4-python | netcdf4-python-master/test/tst_rename.py | import sys
import unittest
import os
import tempfile
import netCDF4
from netCDF4 import __has_rename_grp__
# test changing dimension, variable names
# and deleting attributes.
FILE_NAME = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
LAT_NAME="lat"
LON_NAME="lon"
LON_NAME2 = "longitude"
LEVEL_NAME="lev... | 5,167 | 35.13986 | 79 | py |
netcdf4-python | netcdf4-python-master/test/tst_alignment.py | import numpy as np
from netCDF4 import set_alignment, get_alignment, Dataset
from netCDF4 import __has_set_alignment__
import netCDF4
import os
import subprocess
import tempfile
import unittest
# During testing, sometimes development versions are used.
# They may be written as 4.9.1-development
libversion_no_developme... | 5,676 | 33.828221 | 88 | py |
netcdf4-python | netcdf4-python-master/test/tst_filepath.py | import os, sys, shutil
import tempfile
import unittest
import netCDF4
class test_filepath(unittest.TestCase):
def setUp(self):
self.netcdf_file = os.path.join(os.getcwd(), "netcdf_dummy_file.nc")
self.nc = netCDF4.Dataset(self.netcdf_file)
def test_filepath(self):
assert self.nc.file... | 1,067 | 29.514286 | 76 | py |
netcdf4-python | netcdf4-python-master/test/tst_issue908.py | import netCDF4, unittest
import numpy as np
class Issue908TestCase(unittest.TestCase):
def setUp(self):
nc = netCDF4.Dataset('CRM032_test1.nc')
self.nc = nc
def tearDown(self):
self.nc.close()
def runTest(self):
data = self.nc['rgrid'][:]
assert(data.all() is np.m... | 378 | 18.947368 | 47 | py |
camel_tools | camel_tools-master/setup.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 4,817 | 32.227586 | 79 | py |
camel_tools | camel_tools-master/camel_tools/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,567 | 39.205128 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_data.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 5,041 | 29.011905 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_diac.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 5,882 | 32.617143 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_arclean.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 3,901 | 29.015385 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_morphology.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 14,086 | 29.757642 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/utils.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 1,914 | 34.462963 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_word_tokenize.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 3,552 | 28.363636 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_dediac.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 5,596 | 31.923529 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/camel_transliterate.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, inclu... | 7,318 | 35.412935 | 79 | py |
camel_tools | camel_tools-master/camel_tools/cli/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,203 | 47.16 | 79 | py |
camel_tools | camel_tools-master/camel_tools/morphology/reinflector.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 7,462 | 37.271795 | 81 | py |
camel_tools | camel_tools-master/camel_tools/morphology/errors.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 3,942 | 27.366906 | 79 | py |
camel_tools | camel_tools-master/camel_tools/morphology/utils.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 10,355 | 34.34471 | 79 | py |
camel_tools | camel_tools-master/camel_tools/morphology/analyzer.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 18,547 | 34.876209 | 79 | py |
camel_tools | camel_tools-master/camel_tools/morphology/database.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 17,140 | 34.415289 | 79 | py |
camel_tools | camel_tools-master/camel_tools/morphology/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,315 | 47.740741 | 79 | py |
camel_tools | camel_tools-master/camel_tools/morphology/generator.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 9,177 | 39.078603 | 81 | py |
camel_tools | camel_tools-master/camel_tools/tokenizers/morphological.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 4,375 | 35.466667 | 79 | py |
camel_tools | camel_tools-master/camel_tools/tokenizers/__init__.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 1,208 | 42.178571 | 79 | py |
camel_tools | camel_tools-master/camel_tools/tokenizers/word.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 3,526 | 41.493976 | 79 | py |
camel_tools | camel_tools-master/camel_tools/sentiment/__init__.py |
# -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitati... | 6,028 | 34.464706 | 82 | py |
camel_tools | camel_tools-master/camel_tools/ner/__init__.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 17,999 | 40.189931 | 79 | py |
camel_tools | camel_tools-master/camel_tools/dialectid/model6.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 18,565 | 35.261719 | 79 | py |
camel_tools | camel_tools-master/camel_tools/dialectid/common.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 2,979 | 31.043011 | 79 | py |
camel_tools | camel_tools-master/camel_tools/dialectid/model26.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 22,736 | 35.495987 | 79 | py |
camel_tools | camel_tools-master/camel_tools/dialectid/__init__.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 2,040 | 38.25 | 79 | py |
camel_tools | camel_tools-master/camel_tools/utils/charsets.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 4,968 | 42.208696 | 80 | py |
camel_tools | camel_tools-master/camel_tools/utils/dediac.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 3,413 | 27.689076 | 79 | py |
camel_tools | camel_tools-master/camel_tools/utils/charmap.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 10,962 | 34.478964 | 79 | py |
camel_tools | camel_tools-master/camel_tools/utils/stringutils.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 2,753 | 30.295455 | 79 | py |
camel_tools | camel_tools-master/camel_tools/utils/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,232 | 46.423077 | 79 | py |
camel_tools | camel_tools-master/camel_tools/utils/normalize.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 7,288 | 25.032143 | 79 | py |
camel_tools | camel_tools-master/camel_tools/utils/transliterate.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 4,578 | 36.532787 | 79 | py |
camel_tools | camel_tools-master/camel_tools/data/downloader.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 6,437 | 33.427807 | 79 | py |
camel_tools | camel_tools-master/camel_tools/data/post_install.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 2,459 | 34.652174 | 79 | py |
camel_tools | camel_tools-master/camel_tools/data/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,763 | 34.28 | 79 | py |
camel_tools | camel_tools-master/camel_tools/data/catalogue.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 17,448 | 31.614953 | 102 | py |
camel_tools | camel_tools-master/camel_tools/tagger/common.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 1,846 | 34.519231 | 79 | py |
camel_tools | camel_tools-master/camel_tools/tagger/__init__.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 1,151 | 45.08 | 79 | py |
camel_tools | camel_tools-master/camel_tools/tagger/default.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 5,459 | 29.333333 | 79 | py |
camel_tools | camel_tools-master/camel_tools/disambig/mle.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 10,769 | 36.137931 | 81 | py |
camel_tools | camel_tools-master/camel_tools/disambig/score_function.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 3,483 | 31.867925 | 79 | py |
camel_tools | camel_tools-master/camel_tools/disambig/common.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 5,555 | 34.845161 | 79 | py |
camel_tools | camel_tools-master/camel_tools/disambig/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,210 | 47.44 | 79 | py |
camel_tools | camel_tools-master/camel_tools/disambig/bert/unfactored.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 25,500 | 38.536434 | 100 | py |
camel_tools | camel_tools-master/camel_tools/disambig/bert/__init__.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 1,279 | 40.290323 | 79 | py |
camel_tools | camel_tools-master/camel_tools/disambig/bert/_bert_morph_dataset.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 12,226 | 43.300725 | 79 | py |
camel_tools | camel_tools-master/tests/test_stringutils.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 2,321 | 31.25 | 79 | py |
camel_tools | camel_tools-master/tests/test_charmap.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 12,276 | 29.46402 | 79 | py |
camel_tools | camel_tools-master/tests/test_meta.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 1,967 | 34.781818 | 79 | py |
camel_tools | camel_tools-master/tests/test_transliterate.py | # -*- coding: utf-8 -*-
# MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitatio... | 7,987 | 32.704641 | 79 | py |
camel_tools | camel_tools-master/tests/__init__.py | # MIT License
#
# Copyright 2018-2022 New York University Abu Dhabi
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, co... | 1,125 | 50.181818 | 79 | py |
camel_tools | camel_tools-master/docs/source/conf.py | # -*- coding: utf-8 -*-
#
# Configuration file for the Sphinx documentation builder.
#
# This file does only contain a selection of the most common options. For a
# full list see the documentation:
# http://www.sphinx-doc.org/en/master/config
# -- Path setup ------------------------------------------------------------... | 5,775 | 28.025126 | 79 | py |
femocs | femocs-main/in/flat.py | #!/usr/bin/python
import numpy as np
width = 30
Nwidth = 8
x = np.linspace(-width, width, Nwidth)
y = np.copy(x)
X,Y = np.meshgrid(x,y)
Z = np.copy(X) * 0
X = np.reshape(X,-1)
Y = np.reshape(Y,-1)
Z = np.reshape(Z,-1)
with open("flat.ckx","w") as f:
f.write("%d\nMedium properties=type:I:1:pos:R:3\n"%len(X))
for i ... | 381 | 19.105263 | 59 | py |
cqr | cqr-master/nonconformist/nc.py | #!/usr/bin/env python
"""
Nonconformity functions.
"""
# Authors: Henrik Linusson
# Yaniv Romano modified RegressorNc class to include CQR
from __future__ import division
import abc
import numpy as np
import sklearn.base
from nonconformist.base import ClassifierAdapter, RegressorAdapter
from nonconformist.base impo... | 17,678 | 27.79316 | 79 | py |
cqr | cqr-master/nonconformist/base.py | #!/usr/bin/env python
"""
docstring
"""
# Authors: Henrik Linusson
import abc
import numpy as np
from sklearn.base import BaseEstimator
class RegressorMixin(object):
def __init__(self):
super(RegressorMixin, self).__init__()
@classmethod
def get_problem_type(cls):
return 'regression'
class ClassifierMix... | 3,379 | 20.528662 | 63 | py |
cqr | cqr-master/nonconformist/icp.py | #!/usr/bin/env python
"""
Inductive conformal predictors.
"""
# Authors: Henrik Linusson
from __future__ import division
from collections import defaultdict
from functools import partial
import numpy as np
from sklearn.base import BaseEstimator
from nonconformist.base import RegressorMixin, ClassifierMixin
from no... | 13,978 | 30.698413 | 79 | py |
cqr | cqr-master/nonconformist/cp.py | from nonconformist.icp import *
# TODO: move contents from nonconformist.icp here
# -----------------------------------------------------------------------------
# TcpClassifier
# -----------------------------------------------------------------------------
class TcpClassifier(BaseEstimator, ClassifierMixin):
"""Tra... | 5,299 | 29.813953 | 79 | py |
cqr | cqr-master/nonconformist/util.py | from __future__ import division
import numpy as np
def calc_p(ncal, ngt, neq, smoothing=False):
if smoothing:
return (ngt + (neq + 1) * np.random.uniform(0, 1)) / (ncal + 1)
else:
return (ngt + neq + 1) / (ncal + 1)
| 223 | 23.888889 | 65 | py |
cqr | cqr-master/nonconformist/__init__.py | #!/usr/bin/env python
"""
docstring
"""
# Authors: Henrik Linusson
# Yaniv Romano modified np.py file to include CQR
__version__ = '2.1.0'
__all__ = ['icp', 'nc', 'acp']
| 174 | 12.461538 | 49 | py |
cqr | cqr-master/nonconformist/evaluation.py | #!/usr/bin/env python
"""
Evaluation of conformal predictors.
"""
# Authors: Henrik Linusson
# TODO: cross_val_score/run_experiment should possibly allow multiple to be evaluated on identical folding
from __future__ import division
from nonconformist.base import RegressorMixin, ClassifierMixin
import sys
import n... | 14,339 | 30.378556 | 106 | py |
cqr | cqr-master/nonconformist/acp.py | #!/usr/bin/env python
"""
Aggregated conformal predictors
"""
# Authors: Henrik Linusson
import numpy as np
from sklearn.cross_validation import KFold, StratifiedKFold
from sklearn.cross_validation import ShuffleSplit, StratifiedShuffleSplit
from sklearn.base import clone
from nonconformist.base import BaseEstimator... | 10,138 | 26.402703 | 79 | py |
cqr | cqr-master/get_meps_data/meps_dataset_panel19_fy2015_reg.py | # This code is a variant of
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/meps_dataset_panel19_fy2015.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import pandas as pd
from save_dataset import Save... | 5,141 | 48.442308 | 137 | py |
cqr | cqr-master/get_meps_data/base_dataset.py | # Code copied from IBM's AIF360 package:
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/dataset.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import abc
import copy
import sys
if sys.version_info >=... | 2,782 | 32.53012 | 80 | py |
cqr | cqr-master/get_meps_data/meps_dataset_panel21_fy2016_reg.py | # This code is a variant of
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/meps_dataset_panel21_fy2016.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import pandas as pd
#from standard_dataset import... | 5,262 | 49.12381 | 137 | py |
cqr | cqr-master/get_meps_data/structured_dataset.py | # Code copied from IBM's AIF360 package
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/structured_dataset.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
from collections import defaultdict
from contex... | 24,495 | 43.70073 | 133 | py |
cqr | cqr-master/get_meps_data/save_dataset.py | # Code copied from IBM's AIF360 package
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/standard_dataset.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
from logging import warning
import numpy as np
i... | 6,412 | 45.136691 | 112 | py |
cqr | cqr-master/get_meps_data/regression_dataset.py | # Code copied from IBM's AIF360 package
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/binary_label_dataset.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import numpy as np
from structured_dataset i... | 2,259 | 39.357143 | 83 | py |
cqr | cqr-master/get_meps_data/meps_dataset_panel20_fy2015_reg.py | # This code is a variant of
# https://github.com/IBM/AIF360/blob/master/aif360/datasets/meps_dataset_panel20_fy2015.py
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import pandas as pd
#from standard_datasets impor... | 5,265 | 48.679245 | 137 | py |
cqr | cqr-master/get_meps_data/main_clean_and_save_to_csv.py |
# Code based on IBM's AIF360 software package, suggesting a simple modification
# that accumulates the medical utilization variables without binarization
# Load packages
from meps_dataset_panel19_fy2015_reg import MEPSDataset19Reg
from meps_dataset_panel20_fy2015_reg import MEPSDataset20Reg
from meps_dataset_panel21_... | 8,836 | 50.678363 | 107 | py |
cqr | cqr-master/cqr/torch_models.py |
import sys
import copy
import torch
import numpy as np
import torch.nn as nn
from cqr import helper
from sklearn.model_selection import train_test_split
if torch.cuda.is_available():
device = "cuda:0"
else:
device = "cpu"
###############################################################################
# Help... | 17,313 | 33.217391 | 215 | py |
cqr | cqr-master/cqr/tune_params_cv.py |
from cqr import helper
from skgarden import RandomForestQuantileRegressor
from sklearn.model_selection import train_test_split
def CV_quntiles_rf(params,
X,
y,
target_coverage,
grid_q,
test_ratio,
random... | 3,123 | 42.388889 | 109 | py |
cqr | cqr-master/cqr/helper.py |
import sys
import torch
import numpy as np
from cqr import torch_models
from functools import partial
from cqr import tune_params_cv
from nonconformist.cp import IcpRegressor
from nonconformist.base import RegressorAdapter
from skgarden import RandomForestQuantileRegressor
if torch.cuda.is_available():
device = "... | 22,414 | 36.927242 | 133 | py |
cqr | cqr-master/cqr/__init__.py | #!/usr/bin/env python
| 22 | 10.5 | 21 | py |
cqr | cqr-master/datasets/datasets.py |
import numpy as np
import pandas as pd
def GetDataset(name, base_path):
""" Load a dataset
Parameters
----------
name : string, dataset name
base_path : string, e.g. "path/to/datasets/directory/"
Returns
-------
X : features (nXp)
y : labels (n)
"""
if name=="m... | 17,896 | 49.414085 | 122 | py |
cqr | cqr-master/reproducible_experiments/run_equalized_coverage_experiment.py | #!/usr/bin/env python
# coding: utf-8
import os
import torch
import random
import numpy as np
np.warnings.filterwarnings('ignore')
from datasets import datasets
from sklearn.preprocessing import StandardScaler
from sklearn.model_selection import train_test_split
import pandas as pd
# for MEPS
def condition(x, y=Non... | 22,793 | 41.36803 | 118 | py |
cqr | cqr-master/reproducible_experiments/all_equalized_coverage_experiments.py | ###############################################################################
# Script for reproducing the results of CQR paper
###############################################################################
import numpy as np
from reproducible_experiments.run_equalized_coverage_experiment import run_equalized_cover... | 1,442 | 40.228571 | 104 | py |
cqr | cqr-master/reproducible_experiments/all_cqr_experiments.py |
###############################################################################
# Script for reproducing the results of CQR paper
###############################################################################
import numpy as np
from reproducible_experiments.run_cqr_experiment import run_experiment
#from run_cqr_expe... | 1,670 | 32.42 | 79 | py |
cqr | cqr-master/reproducible_experiments/run_cqr_experiment.py | import os
import sys
import torch
import random
import numpy as np
import pandas as pd
from cqr import helper
from datasets import datasets
from sklearn import linear_model
from nonconformist.nc import NcFactory
from nonconformist.nc import RegressorNc
from nonconformist.nc import AbsErrorErrFunc
from nonconformist.nc ... | 30,512 | 41.915612 | 139 | py |
tmbidl | tmbidl-master/catalogs/generateContCat.py | # generateContCat.py - generate continuum catalog
#
# Usage:
#
# > python generateContCat.py <catalog name>
#
def generateContCat(proj='hii'):
# set the output file
outfile = 'source_catalog'
fout = open(outfile, 'w')
print " "
print "Reading data from proj :", proj
print " "
# define ... | 2,910 | 34.5 | 259 | py |
MCEvidence | MCEvidence-master/examples.py | '''
Collection of codes that can be used to test the MCEvidence code.
The examples below demostrate the validitiy of MCEvidence for
three MCMC samplers:
* Gibbs Sampling
* PyStan NUT sampler
* EMCEE sampler
Two types of likelihood surface is considered
* Gaussian Linear Model - 3 dimensions
* N-dimensional Gaussian... | 18,044 | 30.994681 | 104 | py |
MCEvidence | MCEvidence-master/setup.py | #!/usr/bin/env python
from __future__ import absolute_import
import io
import re
import os
try:
from setuptools import setup
except ImportError:
from distutils.core import setup
def find_version():
version_file = io.open(os.path.join(os.path.dirname(__file__), 'MCEvidence.py')).read()
version_match =... | 1,451 | 29.25 | 91 | py |
MCEvidence | MCEvidence-master/MCEvidence.py | #!usr/bin/env python
"""
Authors : Yabebal Fantaye
Email : yabi@aims.ac.za
Affiliation : African Institute for Mathematical Sciences - South Africa
Stellenbosch University - South Africa
License : MIT
Status : Under Development
Description :
Python implementation of the evidence estimation from MCMC ch... | 58,030 | 38.343051 | 126 | py |
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