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UNIT
UNIT-master/trainer.py
""" Copyright (C) 2017 NVIDIA Corporation. All rights reserved. Licensed under the CC BY-NC-SA 4.0 license (https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode). """ from networks import AdaINGen, MsImageDis, VAEGen from utils import weights_init, get_model_list, vgg_preprocess, load_vgg16, get_scheduler from ...
19,914
51.133508
117
py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/convert_from_keras.py
import argparse import collections import h5py import torch alphabet = ['a', 'b', 'c', 'd', 'e', 'f', 'g', 'h', 'i', 'j', 'k', 'l', 'm', 'n', 'o', 'p', 'q', 'r', 's', 't', 'u', 'v', 'w', 'x', 'y', 'z'] parser = argparse.ArgumentParser(description='Convert keras-mask-rcnn model to pytorch-mask-rcnn model') parser.add_...
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/utils.py
""" Mask R-CNN Common utility functions and classes. Copyright (c) 2017 Matterport, Inc. Licensed under the MIT License (see LICENSE for details) Written by Waleed Abdulla """ import sys import os import math import random import numpy as np import scipy.misc import scipy.ndimage import skimage.color import skimage.i...
16,796
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/model.py
""" Mask R-CNN The main Mask R-CNN model implemenetation. Copyright (c) 2017 Matterport, Inc. Licensed under the MIT License (see LICENSE for details) Written by Waleed Abdulla """ import datetime import math import os import random import re import numpy as np import torch import torch.nn as nn import torch.nn.func...
86,552
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/demo.py
import os import sys import random import math import numpy as np import skimage.io import matplotlib import matplotlib.pyplot as plt import coco import utils import model as modellib import visualize import torch # Root directory of the project ROOT_DIR = os.getcwd() # Directory to save logs and trained model MOD...
2,767
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/coco.py
""" Mask R-CNN Configurations and data loading code for MS COCO. Copyright (c) 2017 Matterport, Inc. Licensed under the MIT License (see LICENSE for details) Written by Waleed Abdulla ------------------------------------------------------------ Usage: import the module (see Jupyter notebooks for examples), or run fr...
20,937
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/roialign/roi_align/roi_align.py
import torch from torch import nn from .crop_and_resize import CropAndResizeFunction, CropAndResize class RoIAlign(nn.Module): def __init__(self, crop_height, crop_width, extrapolation_value=0, transform_fpcoor=True): super(RoIAlign, self).__init__() self.crop_height = crop_height self....
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/roialign/roi_align/crop_and_resize.py
import math import torch import torch.nn as nn import torch.nn.functional as F from torch.autograd import Function from ._ext import crop_and_resize as _backend class CropAndResizeFunction(Function): def __init__(self, crop_height, crop_width, extrapolation_value=0): self.crop_height = crop_height ...
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/roialign/roi_align/build.py
import os import torch from torch.utils.ffi import create_extension sources = ['src/crop_and_resize.c'] headers = ['src/crop_and_resize.h'] defines = [] with_cuda = False extra_objects = [] if torch.cuda.is_available(): print('Including CUDA code.') sources += ['src/crop_and_resize_gpu.c'] headers += ['s...
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/nms/pth_nms.py
import torch from ._ext import nms import numpy as np def pth_nms(dets, thresh): """ dets has to be a tensor """ if not dets.is_cuda: x1 = dets[:, 1] y1 = dets[:, 0] x2 = dets[:, 3] y2 = dets[:, 2] scores = dets[:, 4] areas = (x2 - x1 + 1) * (y2 - y1 + 1) order = scores.sort(0, des...
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py
pytorch-mask-rcnn
pytorch-mask-rcnn-master/nms/build.py
import os import torch from torch.utils.ffi import create_extension sources = ['src/nms.c'] headers = ['src/nms.h'] defines = [] with_cuda = False if torch.cuda.is_available(): print('Including CUDA code.') sources += ['src/nms_cuda.c'] headers += ['src/nms_cuda.h'] defines += [('WITH_CUDA', None)] ...
774
21.142857
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py
MT3
MT3-master/src/training.py
import os import time import datetime import re import shutil import pickle from collections import deque import argparse import numpy as np import torch from torch.optim import Adam from torch.optim.lr_scheduler import ReduceLROnPlateau import matplotlib.pyplot as plt from matplotlib.gridspec import GridSpec from da...
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MT3
MT3-master/src/data_generation/data_generator.py
import multiprocessing import numpy as np from numpy.random import SeedSequence, default_rng import torch from torch import Tensor from data_generation.mot_data_generation import MotDataGenerator from util.misc import NestedTensor class DataGenerator: def __init__(self, params): self.params = params ...
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MT3
MT3-master/src/modules/contrastive_loss.py
import torch from torch import nn, Tensor from torch.nn import functional as F class ContrastiveLoss(nn.Module): def __init__(self, params): super().__init__() self.device = torch.device(params.training.device) def forward(self, log_classifications, unique_ids) -> Tensor: batch_size, ...
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MT3
MT3-master/src/modules/matcher.py
import torch from scipy.optimize import linear_sum_assignment from torch import nn class HungarianMatcher(nn.Module): """This class computes an assignment between the targets and the predictions of the network For efficiency reasons, the targets don't include the no_object. Because of this, in general, th...
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py
MT3
MT3-master/src/modules/mlp.py
import torch from torch import nn, Tensor from torch.nn import functional as F class MLP(nn.Module): """ Very simple multi-layer perceptron (also called FFN)""" def __init__(self, input_dim, hidden_dim, output_dim, num_layers): super().__init__() self.num_layers = num_layers h = [hidde...
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MT3
MT3-master/src/modules/evaluation_gui.py
"""tkinter app for evaluation GUI. Run evaluation.py to try it out! """ import matplotlib import os import torch from pathlib import Path matplotlib.use("TkAgg") from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg, NavigationToolbar2Tk from matplotlib.figure import Figure from scipy.io import loadmat impor...
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MT3
MT3-master/src/modules/loss.py
import numpy as np import torch from torch import nn, Tensor import torch.nn.functional as F from scipy.optimize import linear_sum_assignment def check_gospa_parameters(c, p, alpha): """ Check parameter bounds. If the parameter values are outside the allowable range specified in the definition of GOSPA, ...
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MT3
MT3-master/src/modules/evaluator.py
import torch import time import numpy as np from util.misc import NestedTensor #from sklearn.manifold import TSNE #from sklearn.decomposition import PCA def compute_losses(outputs, labels, contrastive_classifications, unique_ids, mot_loss, contrastive_loss): c_loss = contrastive_loss.forward(contrastive_classific...
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py
MT3
MT3-master/src/modules/transformer.py
import torch from torch import nn, Tensor import torch.nn.functional as F from torch.nn.modules import ModuleList import copy from typing import Optional, List """ MOTT Transformer class. Copy-pasted from Facebook's DETR Transformer modules with the following modifications: * * * """ class PreProcce...
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py
MT3
MT3-master/src/modules/position_encoder.py
import torch from torch import nn, Tensor import math class LearnedPositionEncoder(nn.Module): """ Learned Position Encoder. Takes tensor of positional indicies and converts to learned embeddings """ def __init__(self, n_timesteps, d_model): super().__init__() self.embeddor = nn.E...
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MT3
MT3-master/src/modules/contrastive_classifier.py
import torch from torch import nn, Tensor from torch.nn import functional as F import numpy as np from typing import Optional class ContrastiveClassifier(nn.Module): def __init__(self, measurement_dim): super().__init__() self.measurement_dim = measurement_dim self.device = 'cpu' ...
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py
MT3
MT3-master/src/modules/models/mt3/transformer.py
import torch from torch import nn, Tensor import torch.nn.functional as F from torch.nn.modules import ModuleList from util.misc import inverse_sigmoid from modules.transformer import PreProccessor, TransformerEncoderLayer, TransformerDecoderLayer, TransformerEncoder import copy from typing import Optional, List c...
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py
MT3
MT3-master/src/modules/models/mt3/mt3.py
import torch from torch import nn from modules.position_encoder import LearnedPositionEncoder from modules.mlp import MLP from modules.models.mt3.transformer import TransformerEncoder, TransformerDecoder, PreProccessor, TransformerEncoderLayer, TransformerDecoderLayer from modules.contrastive_classifier import Contrast...
12,318
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py
MT3
MT3-master/src/util/plotting.py
import numpy as np import torch import matplotlib import matplotlib.pyplot as plt @torch.no_grad() def output_truth_plot(ax, output, labels, matched_idx, batch, training_example_to_plot=0): assert 'state' in output, "'state' should be in dict" assert 'logits' in output, "'logits' should be in dict" ...
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py
MT3
MT3-master/src/util/misc.py
from typing import Optional, List import math import os import sys import torch from torch import Tensor from util.load_config_files import load_yaml_into_dotdict, dotdict class NestedTensor(object): def __init__(self, tensors, mask: Optional[Tensor]): self.tensors = tensors self.mask = mask ...
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py
MT3
MT3-master/src/util/generate_data_for_matlab.py
import sys import argparse from scipy.io import savemat import torch import numpy as np from src.data_generation.data_generator import DataGenerator from src.util.load_config_files import load_yaml_into_dotdict, dotdict parser = argparse.ArgumentParser() parser.add_argument('-fp', '--filepath', help='filepath to co...
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py
MT3
MT3-master/src/tests/test_unique_obj_ids_data_generator.py
import numpy as np import matplotlib.pyplot as plt import torch from src.data_generation.data_generator import MotDataGenerator from src.training import get_params, convert_to_dot_dict params = get_params() params = convert_to_dot_dict(params) data_gen_params = params.data_generation_params data_gen_params.sigma_y =...
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py
MT3
MT3-master/src/tests/integration_test_contrastive_classifier.py
from data_generation.data_generator import DataGenerator from util.load_config_files import dotdict from util.plotting import contrastive_classifications_plot from modules.loss import MotLoss from modules.contrastive_loss import ContrastiveLoss from modules.MOTT import MOTT import numpy as np import torch from torch.op...
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py
MT3
MT3-master/src/tests/test_compute_contrastive_classifier_output.py
import unittest import torch from torch import nn import numpy as np from src.modules.contrastive_classifier import ContrastiveClassifier class TestComputeContrastiveClassifierOutput(unittest.TestCase): def test_batch_input(self): # Input x = [ [ [5.0, 9.0], ...
6,060
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py
MT3
MT3-master/src/tests/integration_test_data_generator.py
import argparse import matplotlib.pyplot as plt import torch import numpy as np from src.data_generation.data_generator import DataGenerator from src.util.load_config_files import load_yaml_into_dotdict, dotdict from src.util.misc import factor_int batch_size = 4 # Load hyperparameters from yaml file specified via ...
1,713
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py
MT3
MT3-master/src/tests/test_contrastive_loss.py
import unittest import torch import numpy as np from numpy import log from src.modules.contrastive_loss import ContrastiveLoss class TestContrastiveLoss(unittest.TestCase): def test_simple_input(self): # Input unique_ids = \ [ [2, 0, 1, 2], [6, 7, 6, 6...
2,630
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py
darmonpoints
darmonpoints-master/docs/source/conf.py
# -*- coding: utf-8 -*- # # sample documentation build configuration file, # inspried by slabbe configuration file created sphinx-quickstart # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. ...
11,697
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py
eli5
eli5-master/tests/test_xgboost.py
# -*- coding: utf-8 -*- from __future__ import absolute_import import pytest import numpy as np import scipy.sparse as sp from sklearn.feature_extraction.text import CountVectorizer pytest.importorskip('xgboost') import xgboost from xgboost import XGBClassifier, XGBRegressor from sklearn.pipeline import FeatureUnion f...
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py
eli5
eli5-master/tests/test_keras.py
# -*- coding: utf-8 -*- """Keras unit tests""" import pytest keras = pytest.importorskip('keras') import keras.backend as K from keras.models import Sequential, Model from keras.layers import ( Dense, Activation, Conv2D, GlobalAveragePooling2D, Input, Lambda, ) from keras.backend import...
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py
eli5
eli5-master/tests/test_keras_integration.py
# -*- coding: utf-8 -*- """Test integration of Grad-CAM explanation and image formatter for Keras""" from __future__ import print_function import pytest keras = pytest.importorskip('keras') PIL = pytest.importorskip('PIL') matplotlib = pytest.importorskip('matplotlib') IPython = pytest.importorskip('IPython') impor...
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py
eli5
eli5-master/tests/test_sklearn_permutation_importance.py
# -*- coding: utf-8 -*- import pytest import numpy as np from sklearn.base import is_classifier, is_regressor from sklearn.svm import SVR, SVC from sklearn.ensemble import RandomForestRegressor, RandomForestClassifier from sklearn.model_selection import train_test_split, cross_val_score from sklearn.pipeline import mak...
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py
eli5
eli5-master/docs/source/conf.py
#!/usr/bin/env python3 # -*- coding: utf-8 -*- # # ELI5 documentation build configuration file, created by # sphinx-quickstart on Mon Nov 14 21:54:37 2016. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autog...
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py
eli5
eli5-master/eli5/xgboost.py
# -*- coding: utf-8 -*- from __future__ import absolute_import from functools import partial import re from typing import Any, Dict, List, Tuple, Optional, Pattern import numpy as np import scipy.sparse as sp from xgboost import ( XGBClassifier, XGBRegressor, Booster, DMatrix ) from eli5.explain impor...
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py
eli5
eli5-master/eli5/lightgbm.py
# -*- coding: utf-8 -*- from __future__ import absolute_import, division from collections import defaultdict from typing import DefaultDict, Optional import numpy as np import lightgbm from eli5.explain import explain_weights, explain_prediction from eli5._feature_importances import get_feature_importance_explanation...
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py
eli5
eli5-master/eli5/_decision_path.py
# Method for determining feature importances follows an idea from # http://blog.datadive.net/interpreting-random-forests/. # Implementations are in eli5.xgboost, eli5.lightgbm and # eli5.sklearn.explain_prediction. from eli5._feature_weights import get_top_features_filtered from eli5.base import Explanation, TargetExpl...
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py
eli5
eli5-master/eli5/__init__.py
# -*- coding: utf-8 -*- from __future__ import absolute_import __version__ = '0.10.1' from .formatters import ( format_as_html, format_html_styles, format_as_text, format_as_dict, ) from .explain import explain_weights, explain_prediction from .sklearn import explain_weights_sklearn, explain_predictio...
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eli5
eli5-master/eli5/keras/gradcam.py
# -*- coding: utf-8 -*- from __future__ import absolute_import from typing import Union, Optional, Tuple, List import numpy as np import keras import keras.backend as K from keras.models import Model from keras.layers import Layer def gradcam(weights, activations): # type: (np.ndarray, np.ndarray) -> np.ndarray ...
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eli5
eli5-master/eli5/keras/__init__.py
# -*- coding: utf-8 -*- from .explain_prediction import explain_prediction_keras from .gradcam import gradcam, gradcam_backend
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py
eli5
eli5-master/eli5/keras/explain_prediction.py
# -*- coding: utf-8 -*- from __future__ import absolute_import from typing import Union, Optional, Callable, Tuple, List, TYPE_CHECKING if TYPE_CHECKING: import PIL import numpy as np import keras import keras.backend as K from keras.models import Model from keras.layers import Layer from keras.layers import ( ...
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py
DALLE2-pytorch
DALLE2-pytorch-main/setup.py
from setuptools import setup, find_packages exec(open('dalle2_pytorch/version.py').read()) setup( name = 'dalle2-pytorch', packages = find_packages(exclude=[]), include_package_data = True, entry_points={ 'console_scripts': [ 'dalle2_pytorch = dalle2_pytorch.cli:main', 'dream = dalle2_pytorch.c...
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py
DALLE2-pytorch
DALLE2-pytorch-main/train_decoder.py
from pathlib import Path from typing import List from datetime import timedelta from dalle2_pytorch.trainer import DecoderTrainer from dalle2_pytorch.dataloaders import create_image_embedding_dataloader from dalle2_pytorch.trackers import Tracker from dalle2_pytorch.train_configs import DecoderConfig, TrainDecoderConf...
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py
DALLE2-pytorch
DALLE2-pytorch-main/train_diffusion_prior.py
import click import torch from torch import nn from typing import List from accelerate import Accelerator from accelerate.utils import set_seed from torch.utils.data import DataLoader from embedding_reader import EmbeddingReader from accelerate.utils import dataclasses as accelerate_dataclasses from dalle2_pytorch.ut...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/vqgan_vae_trainer.py
from math import sqrt import copy from random import choice from pathlib import Path from shutil import rmtree from PIL import Image import torch from torch import nn from torch.cuda.amp import autocast, GradScaler from torch.utils.data import Dataset, DataLoader, random_split import torchvision.transforms as T from ...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/dalle2_pytorch.py
import math import random from tqdm.auto import tqdm from functools import partial, wraps from contextlib import contextmanager from collections import namedtuple from pathlib import Path import torch import torch.nn.functional as F from torch.utils.checkpoint import checkpoint from torch import nn, einsum import torc...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/train_configs.py
import json from torchvision import transforms as T from pydantic import BaseModel, validator, model_validator from typing import List, Optional, Union, Tuple, Dict, Any, TypeVar from x_clip import CLIP as XCLIP from open_clip import list_pretrained from coca_pytorch import CoCa from dalle2_pytorch.dalle2_pytorch imp...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/vqgan_vae.py
import copy import math from math import sqrt from functools import partial, wraps from vector_quantize_pytorch import VectorQuantize as VQ import torch from torch import nn, einsum import torch.nn.functional as F from torch.autograd import grad as torch_grad import torchvision from einops import rearrange, reduce, ...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/cli.py
import click import torch import torchvision.transforms as T from functools import reduce from pathlib import Path from dalle2_pytorch import DALLE2, Decoder, DiffusionPrior def safeget(dictionary, keys, default = None): return reduce(lambda d, key: d.get(key, default) if isinstance(d, dict) else default, keys.sp...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/tokenizer.py
# take from https://github.com/openai/CLIP/blob/main/clip/simple_tokenizer.py # to give users a quick easy start to training DALL-E without doing BPE import torch import html import os import ftfy import regex as re from functools import lru_cache from pathlib import Path from dalle2_pytorch.utils import import_or_p...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/__init__.py
import torch from packaging import version if version.parse(torch.__version__) >= version.parse('2.0.0'): from einops._torch_specific import allow_ops_in_compiled_graph allow_ops_in_compiled_graph() from dalle2_pytorch.version import __version__ from dalle2_pytorch.dalle2_pytorch import DALLE2, DiffusionPrior...
580
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/trainer.py
import time import copy from pathlib import Path from math import ceil from functools import partial, wraps from contextlib import nullcontext from collections.abc import Iterable import torch import torch.nn.functional as F from torch import nn from torch.optim.lr_scheduler import LambdaLR, CosineAnnealingLR from tor...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/trackers.py
import urllib.request import os import json from pathlib import Path import shutil from itertools import zip_longest from typing import Any, Optional, List, Union from pydantic import BaseModel import torch from dalle2_pytorch.dalle2_pytorch import Decoder, DiffusionPrior from dalle2_pytorch.utils import import_or_pri...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/optimizer.py
from torch.optim import AdamW, Adam def separate_weight_decayable_params(params): wd_params, no_wd_params = [], [] for param in params: param_list = no_wd_params if param.ndim < 2 else wd_params param_list.append(param) return wd_params, no_wd_params def get_optimizer( params, lr =...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/dataloaders/prior_loader.py
from math import ceil from clip import tokenize from embedding_reader import EmbeddingReader from torch import from_numpy from torch.utils.data import IterableDataset, DataLoader class PriorEmbeddingDataset(IterableDataset): """ PriorEmbeddingDataset is a wrapper of EmbeddingReader. It enables one to sim...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/dataloaders/decoder_loader.py
import os import webdataset as wds import torch from torch.utils.data import DataLoader import numpy as np import fsspec import shutil def get_shard(filename): """ Filenames with shards in them have a consistent structure that we can take advantage of Standard structure: path/to/file/prefix_string_00001.ex...
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/dataloaders/__init__.py
from dalle2_pytorch.dataloaders.decoder_loader import ImageEmbeddingDataset, create_image_embedding_dataloader from dalle2_pytorch.dataloaders.prior_loader import make_splits, get_reader, PriorEmbeddingDataset
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py
DALLE2-pytorch
DALLE2-pytorch-main/dalle2_pytorch/dataloaders/simple_image_only_dataloader.py
from pathlib import Path import torch from torch.utils import data from torchvision import transforms, utils from PIL import Image # helpers functions def cycle(dl): while True: for data in dl: yield data # dataset and dataloader class Dataset(data.Dataset): def __init__( self,...
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sensecnn
sensecnn-master/sentiment_analysis/__main__.py
from __future__ import print_function import numpy as np np.random.seed(1337) # for reproducibility from keras.preprocessing import sequence from keras.models import Sequential from keras.layers import Dense, Dropout, Activation, Bidirectional from keras.layers import Embedding from keras.layers import LSTM import pr...
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sensecnn
sensecnn-master/topic_categorization/__main__.py
from __future__ import print_function import numpy as np np.random.seed(1337) # for reproducibility from keras.preprocessing import sequence from keras.models import Sequential from keras.layers import Dense, Dropout, Activation from keras.layers import Embedding from keras.layers import LSTM import prepare_dataset a...
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Adaptive-Cutsel-MILP
Adaptive-Cutsel-MILP-main/utilities.py
#! /usr/bin/env python import os import numpy as np import torch import subprocess import shutil import logging import argparse from pyscipopt import Model, quicksum, SCIP_RESULT, SCIP_PARAMSETTING, Branchrule, SCIP_PRESOLTIMING, SCIP_PROPTIMING from ConstraintHandler.ConstraintHandler import RepeatSepaConshdlr from Cu...
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Adaptive-Cutsel-MILP
Adaptive-Cutsel-MILP-main/parameters.py
"""File containing the settings for the experiments you want to perform. Each parameter here affects different bits of the experiments. The individual comments outline how. """ # If you want to use the MIPLIB solution instead of one found after a 10 minute solve, set this to True # In the paper this was set to False f...
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Adaptive-Cutsel-MILP
Adaptive-Cutsel-MILP-main/Slurm/evaluate_trained_network.py
#! /usr/bin/env python import argparse import torch import os from GNN.GNN import GNNPolicy from Slurm.train_neural_network import create_tensorboard_writer, get_standard_solve_data, \ get_rand_seeds_from_feature_generators, generate_batches, run_test_set from utilities import remove_temp_files, str_to_bool, is_fil...
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Adaptive-Cutsel-MILP
Adaptive-Cutsel-MILP-main/Slurm/train_neural_network.py
#! /usr/bin/env python import os import argparse import yaml import logging import numpy as np import torch from torch.utils.tensorboard import SummaryWriter import time from datetime import datetime from utilities import read_feature_vector_files, str_to_bool from utilities import remove_slurm_files, remove_temp_files...
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Adaptive-Cutsel-MILP
Adaptive-Cutsel-MILP-main/scripts/random_seed_finder.py
import argparse import numpy as np import os import torch from GNN.GNN import GNNPolicy from utilities import is_dir, read_feature_vector_files, get_instances from parameters import NUM_TORCH_SEEDS def get_random_seeds(instance_dir): files = os.listdir(instance_dir) files = [file for file in files if file.end...
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Adaptive-Cutsel-MILP
Adaptive-Cutsel-MILP-main/GNN/GNN.py
import torch import torch.nn.functional as F import torch_geometric import numpy as np """ This GNN was mostly taken from an example at Ecole.ai (https://www.ecole.ai/) The exact example can be seen here: https://github.com/ds4dm/ecole/blob/master/examples/branching-imitation.ipynb The design comes from a paper by Gas...
6,703
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py
PIRBN
PIRBN-main/1D_sine_function/PIRBN.py
import tensorflow as tf from Dif_op import Dif def PIRBN(rbn): """ ==================================================================================================================== This function is to initialize a PIRBN. =============================================================================...
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27.571429
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py
PIRBN
PIRBN-main/1D_sine_function/rbn_net.py
import tensorflow as tf import numpy as np class RBN_Net: def __init__(self, n_in, n_out, n_neu, b, c): """ ================================================================================================================ This class is to build a radial basis network (RBN). --...
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py
PIRBN
PIRBN-main/1D_sine_function/Dif_op.py
import tensorflow as tf class Dif(tf.keras.layers.Layer): """ ==================================================================================================================== This is the class for calculating the differential terms of the RBN's output with respect to the RBN's input. We adopt the ...
2,914
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PIRBN
PIRBN-main/1D_sine_coupling/PIRBN.py
import tensorflow as tf from Dif_op import Dif def PIRBN(rbn): """ ==================================================================================================================== This function is to initialize a PIRBN. =============================================================================...
799
27.571429
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PIRBN
PIRBN-main/1D_sine_coupling/rbn_net.py
import tensorflow as tf import numpy as np class RBN_Net: def __init__(self, n_in, n_out, n_neu, b, c): """ ================================================================================================================ This class is to build a radial basis network (RBN). --...
3,058
35.416667
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py
PIRBN
PIRBN-main/1D_sine_coupling/Dif_op.py
import tensorflow as tf class Dif(tf.keras.layers.Layer): """ ==================================================================================================================== This is the class for calculating the differential terms of the RBN's output with respect to the RBN's input. We adopt the ...
2,998
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py
PIRBN
PIRBN-main/2D_viscoelastic_Poiseuille/PIRBN.py
import tensorflow as tf from Dif_op import Dif def PIRBN(rbn_u, rbn_tau): """ ==================================================================================================================== This function is to initialize a PIRBN. ==================================================================...
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py
PIRBN
PIRBN-main/2D_viscoelastic_Poiseuille/rbf_net.py
import tensorflow as tf import numpy as np class RBF_Net: def __init__(self, n_in, n_out, n_neu_x, n_neu_y, b, c_x, c_y): """ ================================================================================================================ This class is to build a radial basis network ...
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py
PIRBN
PIRBN-main/2D_viscoelastic_Poiseuille/Dif_op.py
import tensorflow as tf class Dif(tf.keras.layers.Layer): """ ==================================================================================================================== This is the class for calculating the differential terms of the RBN's output with respect to the RBN's input. We adopt the ...
2,642
41.629032
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py
PIRBN
PIRBN-main/2D_diffusion_equation/PIRBN.py
import tensorflow as tf from Dif_op import Dif def PIRBN(rbn): """ ==================================================================================================================== This function is to initialize a PIRBN. =============================================================================...
899
29
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py
PIRBN
PIRBN-main/2D_diffusion_equation/rbf_net.py
import tensorflow as tf import numpy as np class RBF_Net: def __init__(self, n_in, n_out, n_neu_x, n_neu_y, b, c_x, c_y): """ ================================================================================================================ This class is to build a radial basis network ...
3,607
36.195876
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py
PIRBN
PIRBN-main/2D_diffusion_equation/Dif_op.py
import tensorflow as tf class Dif(tf.keras.layers.Layer): """ ==================================================================================================================== This is the class for calculating the differential terms of the RBN's output with respect to the RBN's input. We adopt the ...
2,967
42.647059
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py
PIRBN
PIRBN-main/2D_wave_equation/PIRBN.py
import tensorflow as tf from Dif_op import Dif def PIRBN(rbn): """ ==================================================================================================================== This function is to initialize a PIRBN. =============================================================================...
930
29.032258
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PIRBN
PIRBN-main/2D_wave_equation/rbf_net.py
import tensorflow as tf import numpy as np class RBF_Net: def __init__(self, n_in, n_out, n_neu_x, n_neu_y, b, c_x, c_y): """ ================================================================================================================ This class is to build a radial basis network ...
3,607
36.195876
120
py
PIRBN
PIRBN-main/2D_wave_equation/Dif_op.py
import tensorflow as tf class Dif(tf.keras.layers.Layer): """ ==================================================================================================================== This is the class for calculating the differential terms of the RBN's output with respect to the RBN's input. We adopt the ...
3,053
43.26087
120
py
PIRBN
PIRBN-main/1D_nonlinear_spring/PIRBN.py
import tensorflow as tf from Dif_op import Dif def PIRBN(rbn): """ ==================================================================================================================== This function is to initialize a PIRBN. =============================================================================...
872
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PIRBN
PIRBN-main/1D_nonlinear_spring/rbn_net.py
import tensorflow as tf import numpy as np class RBN_Net: def __init__(self, n_in, n_out, n_neu, b, c): """ ================================================================================================================ This class is to build a radial basis network (RBN). --...
3,058
35.416667
138
py
PIRBN
PIRBN-main/1D_nonlinear_spring/Dif_op.py
import tensorflow as tf class Dif(tf.keras.layers.Layer): """ ==================================================================================================================== This is the class for calculating the differential terms of the RBN's output with respect to the RBN's input. We adopt the ...
2,914
41.246377
120
py
c3d-pytorch
c3d-pytorch-master/C3D_model.py
import torch.nn as nn class C3D(nn.Module): """ The C3D network as described in [1]. """ def __init__(self): super(C3D, self).__init__() self.conv1 = nn.Conv3d(3, 64, kernel_size=(3, 3, 3), padding=(1, 1, 1)) self.pool1 = nn.MaxPool3d(kernel_size=(1, 2, 2), stride=(1, 2, 2)) ...
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py
c3d-pytorch
c3d-pytorch-master/predict.py
""" How to use C3D network. """ import numpy as np import torch from torch.autograd import Variable from os.path import join from glob import glob import skimage.io as io from skimage.transform import resize from C3D_model import C3D def get_sport_clip(clip_name, verbose=True): """ Loads a clip to be fed ...
2,287
21.431373
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py
spurious_feature_learning
spurious_feature_learning-main/dfr_evaluate_auroc.py
"""Evaluate DFR on spurious correlations datasets.""" import torch import numpy as np import os import sys import tqdm import json import pickle from sklearn.linear_model import LogisticRegression from sklearn.preprocessing import StandardScaler from sklearn.metrics import roc_auc_score import models import utils f...
14,887
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spurious_feature_learning
spurious_feature_learning-main/dfr_evaluate_spurious.py
"""Evaluate DFR on spurious correlations datasets.""" import torch import numpy as np import os import sys import tqdm import json import pickle from sklearn.linear_model import LogisticRegression from sklearn.preprocessing import StandardScaler import models import utils from utils import supervised_utils try: ...
14,016
34.666667
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py
spurious_feature_learning
spurious_feature_learning-main/train_supervised.py
import os import torch import models import optimizers import utils from utils import supervised_utils try: import wandb has_wandb = True except ImportError: has_wandb = False def get_args_parser(): parser = utils.get_default_args() # TODO: add new supervised specific params? return parser de...
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py
spurious_feature_learning
spurious_feature_learning-main/group_DRO/loss.py
import os import torch import torch.nn as nn import torch.nn.functional as F import numpy as np class LossComputer: def __init__(self, criterion, is_robust, dataset, alpha=None, gamma=0.1, adj=None, min_var_weight=0, step_size=0.01, normalize_loss=False, btl=False): self.criterion = criterion self....
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spurious_feature_learning
spurious_feature_learning-main/group_DRO/utils.py
import sys import os import torch import numpy as np import csv import torchvision from torch.utils.tensorboard import SummaryWriter import json class Logger(object): def __init__(self, fpath=None, mode='w'): self.console = sys.stdout self.file = None if fpath is not None: self....
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spurious_feature_learning
spurious_feature_learning-main/group_DRO/train.py
import os import types import gc import torch import torch.nn as nn import torch.nn.functional as F from torch.utils.data import Dataset, DataLoader, Subset import numpy as np from tqdm import tqdm from utils import AverageMeter, accuracy from loss import LossComputer from utils import log_to_tb from pytorch_transfo...
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py
spurious_feature_learning
spurious_feature_learning-main/group_DRO/run_expt.py
import os, csv import argparse import pandas as pd import torch import torch.nn as nn import torchvision import sys from gdro_models import model_attributes from gdro_data import dfr_datasets from gdro_data.data import dataset_attributes, shift_types, prepare_data, log_data from utils import set_seed, Logger, CSVBatch...
9,211
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133
py
spurious_feature_learning
spurious_feature_learning-main/group_DRO/gdro_data/confounder_utils.py
import os import torch import pandas as pd from PIL import Image import numpy as np import torchvision.transforms as transforms from gdro_models import model_attributes from torch.utils.data import Dataset, Subset from gdro_data.celebA_dataset import CelebADataset from gdro_data.cub_dataset import CUBDataset from gdro_...
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py
spurious_feature_learning
spurious_feature_learning-main/group_DRO/gdro_data/confounder_dataset.py
import os import torch import pandas as pd from PIL import Image import numpy as np import torchvision.transforms as transforms from gdro_models import model_attributes from torch.utils.data import Dataset, Subset class ConfounderDataset(Dataset): def __init__(self, root_dir, target_name, confound...
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py
spurious_feature_learning
spurious_feature_learning-main/group_DRO/gdro_data/utils.py
import torch import numpy as np from torch.utils.data import Subset # Train val split def train_val_split(dataset, val_frac): # split into train and val indices = np.arange(len(dataset)) np.random.shuffle(indices) val_size = int(np.round(len(dataset)*val_frac)) train_indices, val_indices = indices[...
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py