| | --- |
| | license: apache-2.0 |
| | --- |
| | # Multilingual Medicine: Model, Dataset, Benchmark, Code |
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| | Covering English, Chinese, French, Hindi, Spanish, Hindi, Arabic So far |
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| | <p align="center"> |
| | 👨🏻💻<a href="https://github.com/FreedomIntelligence/Apollo" target="_blank">Github</a> •📃 <a href="https://arxiv.org/abs/2403.03640" target="_blank">Paper</a> • 🌐 <a href="https://apollo.llmzoo.com/" target="_blank">Demo</a> • 🤗 <a href="https://huggingface.co/datasets/FreedomIntelligence/ApolloCorpus" target="_blank">ApolloCorpus</a> • 🤗 <a href="https://huggingface.co/datasets/FreedomIntelligence/XMedbench" target="_blank">XMedBench</a> |
| | <br> <a href="./README_zh.md"> 中文 </a> | <a href="./README.md"> English |
| | </p> |
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| |  |
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|
| | ## 🌈 Update |
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| | * **[2024.04.25]** [MedJamba](https://huggingface.co/FreedomIntelligence/Apollo-MedJamba) released, train and evaluation code refer to [repo](https://github.com/FreedomIntelligence/MedJamba). |
| | * **[2024.03.07]** [Paper](https://arxiv.org/abs/2403.03640) released. |
| | * **[2024.02.12]** <a href="https://huggingface.co/datasets/FreedomIntelligence/ApolloCorpus" target="_blank">ApolloCorpus</a> and <a href="https://huggingface.co/datasets/FreedomIntelligence/XMedbench" target="_blank">XMedBench</a> is published！🎉 |
| | * **[2024.01.23]** Apollo repo is published！🎉 |
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| | ## Results |
| | 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-0.5B" target="_blank">Apollo-0.5B</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-1.8B" target="_blank">Apollo-1.8B</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-2B" target="_blank">Apollo-2B</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-6B" target="_blank">Apollo-6B</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-7B" target="_blank">Apollo-7B</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-34B" target="_blank">Apollo-34B</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-72B" target="_blank">Apollo-72B</a> |
| | |
| | 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-MedJamba" target="_blank">MedJamba</a> |
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| | 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-0.5B-GGUF" target="_blank">Apollo-0.5B-GGUF</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-2B-GGUF" target="_blank">Apollo-2B-GGUF</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-6B-GGUF" target="_blank">Apollo-6B-GGUF</a> • 🤗 <a href="https://huggingface.co/FreedomIntelligence/Apollo-7B-GGUF" target="_blank">Apollo-7B-GGUF</a> |
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| | |
| | ## Usage Format |
| |
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| | User:{query}\nAssistant:{response}<|endoftext|> |
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| | ## Dataset & Evaluation |
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| | - Dataset |
| | 🤗 <a href="https://huggingface.co/datasets/FreedomIntelligence/ApolloCorpus" target="_blank">ApolloCorpus</a> |
| | |
| | <details><summary>Click to expand</summary> |
| |
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| |  |
| | |
| | - [Zip File](https://huggingface.co/datasets/FreedomIntelligence/ApolloCorpus/blob/main/ApolloCorpus.zip) |
| | - [Data category](https://huggingface.co/datasets/FreedomIntelligence/ApolloCorpus/tree/main/train) |
| | - Pretrain: |
| | - data item: |
| | - json_name: {data_source}_{language}_{data_type}.json |
| | - data_type: medicalBook, medicalGuideline, medicalPaper, medicalWeb(from online forum), medicalWiki |
| | - language: en(English), zh(chinese), es(spanish), fr(french), hi(Hindi) |
| | - data_type: qa(generated qa from text) |
| | - data_type==text: list of string |
| | ``` |
| | [ |
| | "string1", |
| | "string2", |
| | ... |
| | ] |
| | ``` |
| | - data_type==qa: list of qa pairs(list of string) |
| | ``` |
| | [ |
| | [ |
| | "q1", |
| | "a1", |
| | "q2", |
| | "a2", |
| | ... |
| | ], |
| | ... |
| | ] |
| | ``` |
| | - SFT: |
| | - json_name: {data_source}_{language}.json |
| | - data_type: code, general, math, medicalExam, medicalPatient |
| | - data item: list of qa pairs(list of string) |
| | ``` |
| | [ |
| | [ |
| | "q1", |
| | "a1", |
| | "q2", |
| | "a2", |
| | ... |
| | ], |
| | ... |
| | ] |
| | ``` |
| | |
| |
|
| | </details> |
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|
| | - Evaluation |
| | 🤗 <a href="https://huggingface.co/datasets/FreedomIntelligence/XMedbench" target="_blank">XMedBench</a> |
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|
| | <details><summary>Click to expand</summary> |
| | |
| | - EN: |
| | - [MedQA-USMLE](https://huggingface.co/datasets/GBaker/MedQA-USMLE-4-options) |
| | - [MedMCQA](https://huggingface.co/datasets/medmcqa/viewer/default/test) |
| | - [PubMedQA](https://huggingface.co/datasets/pubmed_qa): Because the results fluctuated too much, they were not used in the paper. |
| | - [MMLU-Medical](https://huggingface.co/datasets/cais/mmlu) |
| | - Clinical knowledge, Medical genetics, Anatomy, Professional medicine, College biology, College medicine |
| | - ZH: |
| | - [MedQA-MCMLE](https://huggingface.co/datasets/bigbio/med_qa/viewer/med_qa_zh_4options_bigbio_qa/test) |
| | - [CMB-single](https://huggingface.co/datasets/FreedomIntelligence/CMB): Not used in the paper |
| | - Randomly sample 2,000 multiple-choice questions with single answer. |
| | - [CMMLU-Medical](https://huggingface.co/datasets/haonan-li/cmmlu) |
| | - Anatomy, Clinical_knowledge, College_medicine, Genetics, Nutrition, Traditional_chinese_medicine, Virology |
| | - [CExam](https://github.com/williamliujl/CMExam): Not used in the paper |
| | - Randomly sample 2,000 multiple-choice questions |
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| | - ES: [Head_qa](https://huggingface.co/datasets/head_qa) |
| | - FR: [Frenchmedmcqa](https://github.com/qanastek/FrenchMedMCQA) |
| | - HI: [MMLU_HI](https://huggingface.co/datasets/FreedomIntelligence/MMLU_Arabic) |
| | - Clinical knowledge, Medical genetics, Anatomy, Professional medicine, College biology, College medicine |
| | - AR: [MMLU_Ara](https://huggingface.co/datasets/FreedomIntelligence/MMLU_Hindi) |
| | - Clinical knowledge, Medical genetics, Anatomy, Professional medicine, College biology, College medicine |
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|
| | </details> |
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| |
|
| | ## Results reproduction |
| | <details><summary>Click to expand</summary> |
| |
|
| | **Waiting for Update** |
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| |
|
| | </details> |
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|
| | ## Citation |
| | Please use the following citation if you intend to use our dataset for training or evaluation: |
| |
|
| | ``` |
| | @misc{wang2024apollo, |
| | title={Apollo: Lightweight Multilingual Medical LLMs towards Democratizing Medical AI to 6B People}, |
| | author={Xidong Wang and Nuo Chen and Junyin Chen and Yan Hu and Yidong Wang and Xiangbo Wu and Anningzhe Gao and Xiang Wan and Haizhou Li and Benyou Wang}, |
| | year={2024}, |
| | eprint={2403.03640}, |
| | archivePrefix={arXiv}, |
| | primaryClass={cs.CL} |
| | } |
| | ``` |
| |
|
