| from __future__ import annotations |
|
|
| from typing import TYPE_CHECKING |
|
|
| import numpy as np |
|
|
| from contourpy._contourpy import ( |
| ContourGenerator, |
| FillType, |
| LineType, |
| Mpl2005ContourGenerator, |
| Mpl2014ContourGenerator, |
| SerialContourGenerator, |
| ThreadedContourGenerator, |
| ZInterp, |
| max_threads, |
| ) |
| from contourpy._version import __version__ |
| from contourpy.chunk import calc_chunk_sizes |
| from contourpy.convert import convert_filled, convert_lines |
| from contourpy.dechunk import dechunk_filled, dechunk_lines |
| from contourpy.enum_util import as_fill_type, as_line_type, as_z_interp |
|
|
| if TYPE_CHECKING: |
| from typing import Any |
|
|
| from numpy.typing import ArrayLike |
|
|
| from ._contourpy import CoordinateArray, MaskArray |
|
|
| __all__ = [ |
| "__version__", |
| "contour_generator", |
| "convert_filled", |
| "convert_lines", |
| "dechunk_filled", |
| "dechunk_lines", |
| "max_threads", |
| "FillType", |
| "LineType", |
| "ContourGenerator", |
| "Mpl2005ContourGenerator", |
| "Mpl2014ContourGenerator", |
| "SerialContourGenerator", |
| "ThreadedContourGenerator", |
| "ZInterp", |
| ] |
|
|
|
|
| |
| _class_lookup: dict[str, type[ContourGenerator]] = { |
| "mpl2005": Mpl2005ContourGenerator, |
| "mpl2014": Mpl2014ContourGenerator, |
| "serial": SerialContourGenerator, |
| "threaded": ThreadedContourGenerator, |
| } |
|
|
|
|
| def _remove_z_mask( |
| z: ArrayLike | np.ma.MaskedArray[Any, Any] | None, |
| ) -> tuple[CoordinateArray, MaskArray | None]: |
| |
| z_array = np.ma.asarray(z, dtype=np.float64) |
| z_masked = np.ma.masked_invalid(z_array, copy=False) |
|
|
| if np.ma.is_masked(z_masked): |
| mask = np.ma.getmask(z_masked) |
| else: |
| mask = None |
|
|
| return np.ma.getdata(z_masked), mask |
|
|
|
|
| def contour_generator( |
| x: ArrayLike | None = None, |
| y: ArrayLike | None = None, |
| z: ArrayLike | np.ma.MaskedArray[Any, Any] | None = None, |
| *, |
| name: str = "serial", |
| corner_mask: bool | None = None, |
| line_type: LineType | str | None = None, |
| fill_type: FillType | str | None = None, |
| chunk_size: int | tuple[int, int] | None = None, |
| chunk_count: int | tuple[int, int] | None = None, |
| total_chunk_count: int | None = None, |
| quad_as_tri: bool = False, |
| z_interp: ZInterp | str | None = ZInterp.Linear, |
| thread_count: int = 0, |
| ) -> ContourGenerator: |
| """Create and return a :class:`~contourpy._contourpy.ContourGenerator` object. |
| |
| The class and properties of the returned :class:`~contourpy._contourpy.ContourGenerator` are |
| determined by the function arguments, with sensible defaults. |
| |
| Args: |
| x (array-like of shape (ny, nx) or (nx,), optional): The x-coordinates of the ``z`` values. |
| May be 2D with the same shape as ``z.shape``, or 1D with length ``nx = z.shape[1]``. |
| If not specified are assumed to be ``np.arange(nx)``. Must be ordered monotonically. |
| y (array-like of shape (ny, nx) or (ny,), optional): The y-coordinates of the ``z`` values. |
| May be 2D with the same shape as ``z.shape``, or 1D with length ``ny = z.shape[0]``. |
| If not specified are assumed to be ``np.arange(ny)``. Must be ordered monotonically. |
| z (array-like of shape (ny, nx), may be a masked array): The 2D gridded values to calculate |
| the contours of. May be a masked array, and any invalid values (``np.inf`` or |
| ``np.nan``) will also be masked out. |
| name (str): Algorithm name, one of ``"serial"``, ``"threaded"``, ``"mpl2005"`` or |
| ``"mpl2014"``, default ``"serial"``. |
| corner_mask (bool, optional): Enable/disable corner masking, which only has an effect if |
| ``z`` is a masked array. If ``False``, any quad touching a masked point is masked out. |
| If ``True``, only the triangular corners of quads nearest these points are always masked |
| out, other triangular corners comprising three unmasked points are contoured as usual. |
| If not specified, uses the default provided by the algorithm ``name``. |
| line_type (LineType or str, optional): The format of contour line data returned from calls |
| to :meth:`~contourpy.ContourGenerator.lines`, specified either as a |
| :class:`~contourpy.LineType` or its string equivalent such as ``"SeparateCode"``. |
| If not specified, uses the default provided by the algorithm ``name``. |
| fill_type (FillType or str, optional): The format of filled contour data returned from calls |
| to :meth:`~contourpy.ContourGenerator.filled`, specified either as a |
| :class:`~contourpy.FillType` or its string equivalent such as ``"OuterOffset"``. |
| If not specified, uses the default provided by the algorithm ``name``. |
| chunk_size (int or tuple(int, int), optional): Chunk size in (y, x) directions, or the same |
| size in both directions if only one value is specified. |
| chunk_count (int or tuple(int, int), optional): Chunk count in (y, x) directions, or the |
| same count in both directions if only one value is specified. |
| total_chunk_count (int, optional): Total number of chunks. |
| quad_as_tri (bool): Enable/disable treating quads as 4 triangles, default ``False``. |
| If ``False``, a contour line within a quad is a straight line between points on two of |
| its edges. If ``True``, each full quad is divided into 4 triangles using a virtual point |
| at the centre (mean x, y of the corner points) and a contour line is piecewise linear |
| within those triangles. Corner-masked triangles are not affected by this setting, only |
| full unmasked quads. |
| z_interp (ZInterp or str, optional): How to interpolate ``z`` values when determining where |
| contour lines intersect the edges of quads and the ``z`` values of the central points of |
| quads, specified either as a :class:`~contourpy.ZInterp` or its string equivalent such |
| as ``"Log"``. Default is ``ZInterp.Linear``. |
| thread_count (int): Number of threads to use for contour calculation, default 0. Threads can |
| only be used with an algorithm ``name`` that supports threads (currently only |
| ``name="threaded"``) and there must be at least the same number of chunks as threads. |
| If ``thread_count=0`` and ``name="threaded"`` then it uses the maximum number of threads |
| as determined by the C++11 call ``std::thread::hardware_concurrency()``. If ``name`` is |
| something other than ``"threaded"`` then the ``thread_count`` will be set to ``1``. |
| |
| Return: |
| :class:`~contourpy._contourpy.ContourGenerator`. |
| |
| Note: |
| A maximum of one of ``chunk_size``, ``chunk_count`` and ``total_chunk_count`` may be |
| specified. |
| |
| Warning: |
| The ``name="mpl2005"`` algorithm does not implement chunking for contour lines. |
| """ |
| x = np.asarray(x, dtype=np.float64) |
| y = np.asarray(y, dtype=np.float64) |
| z, mask = _remove_z_mask(z) |
|
|
| |
| if z.ndim != 2: |
| raise TypeError(f"Input z must be 2D, not {z.ndim}D") |
|
|
| if z.shape[0] < 2 or z.shape[1] < 2: |
| raise TypeError(f"Input z must be at least a (2, 2) shaped array, but has shape {z.shape}") |
|
|
| ny, nx = z.shape |
|
|
| |
| if x.ndim != y.ndim: |
| raise TypeError(f"Number of dimensions of x ({x.ndim}) and y ({y.ndim}) do not match") |
|
|
| if x.ndim == 0: |
| x = np.arange(nx, dtype=np.float64) |
| y = np.arange(ny, dtype=np.float64) |
| x, y = np.meshgrid(x, y) |
| elif x.ndim == 1: |
| if len(x) != nx: |
| raise TypeError(f"Length of x ({len(x)}) must match number of columns in z ({nx})") |
| if len(y) != ny: |
| raise TypeError(f"Length of y ({len(y)}) must match number of rows in z ({ny})") |
| x, y = np.meshgrid(x, y) |
| elif x.ndim == 2: |
| if x.shape != z.shape: |
| raise TypeError(f"Shapes of x {x.shape} and z {z.shape} do not match") |
| if y.shape != z.shape: |
| raise TypeError(f"Shapes of y {y.shape} and z {z.shape} do not match") |
| else: |
| raise TypeError(f"Inputs x and y must be None, 1D or 2D, not {x.ndim}D") |
|
|
| |
| if mask is not None and mask.shape != z.shape: |
| raise ValueError("If mask is set it must be a 2D array with the same shape as z") |
|
|
| |
| if name not in _class_lookup: |
| raise ValueError(f"Unrecognised contour generator name: {name}") |
|
|
| |
| y_chunk_size, x_chunk_size = calc_chunk_sizes( |
| chunk_size, chunk_count, total_chunk_count, ny, nx) |
|
|
| cls = _class_lookup[name] |
|
|
| |
| if corner_mask is None: |
| |
| corner_mask = cls.supports_corner_mask() |
| elif corner_mask and not cls.supports_corner_mask(): |
| raise ValueError(f"{name} contour generator does not support corner_mask=True") |
|
|
| |
| if line_type is None: |
| line_type = cls.default_line_type |
| else: |
| line_type = as_line_type(line_type) |
|
|
| if not cls.supports_line_type(line_type): |
| raise ValueError(f"{name} contour generator does not support line_type {line_type}") |
|
|
| |
| if fill_type is None: |
| fill_type = cls.default_fill_type |
| else: |
| fill_type = as_fill_type(fill_type) |
|
|
| if not cls.supports_fill_type(fill_type): |
| raise ValueError(f"{name} contour generator does not support fill_type {fill_type}") |
|
|
| |
| if quad_as_tri and not cls.supports_quad_as_tri(): |
| raise ValueError(f"{name} contour generator does not support quad_as_tri=True") |
|
|
| |
| if z_interp is None: |
| z_interp = ZInterp.Linear |
| else: |
| z_interp = as_z_interp(z_interp) |
|
|
| if z_interp != ZInterp.Linear and not cls.supports_z_interp(): |
| raise ValueError(f"{name} contour generator does not support z_interp {z_interp}") |
|
|
| |
| if thread_count not in (0, 1) and not cls.supports_threads(): |
| raise ValueError(f"{name} contour generator does not support thread_count {thread_count}") |
|
|
| |
| args = [x, y, z, mask] |
| kwargs: dict[str, int | bool | LineType | FillType | ZInterp] = { |
| "x_chunk_size": x_chunk_size, |
| "y_chunk_size": y_chunk_size, |
| } |
|
|
| if name not in ("mpl2005", "mpl2014"): |
| kwargs["line_type"] = line_type |
| kwargs["fill_type"] = fill_type |
|
|
| if cls.supports_corner_mask(): |
| kwargs["corner_mask"] = corner_mask |
|
|
| if cls.supports_quad_as_tri(): |
| kwargs["quad_as_tri"] = quad_as_tri |
|
|
| if cls.supports_z_interp(): |
| kwargs["z_interp"] = z_interp |
|
|
| if cls.supports_threads(): |
| kwargs["thread_count"] = thread_count |
|
|
| |
| return cls(*args, **kwargs) |
|
|