File size: 24,429 Bytes
c061ce5 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 | # -*- coding: utf-8 -*-
"""old_models.ipynb
Automatically generated by Colaboratory.
Original file is located at
https://colab.research.google.com/drive/1Oc7A5TaGLg1qkYXzf0qLGIe0_ZxyAnXE
This notebook contains Feature selection with Chi-Square test, Logistic Regression with TFIDF as well as Bidirectional LSTM with gensim to classifies a given tweet into depressive or non-depressive ones.
"""
from google.colab import drive
drive.mount('/content/drive')
## Import required libraries
## warnings
import warnings
warnings.filterwarnings("ignore")
## for data
import numpy as np
import pandas as pd
## for plotting
import matplotlib.pyplot as plt
import seaborn as sns
## TF-IDF
from sklearn.feature_extraction.text import TfidfVectorizer
## T-Sne
from yellowbrick.text import TSNEVisualizer
from sklearn import manifold
## Train-Test Split
from sklearn.model_selection import train_test_split
## Feature selection
from sklearn import feature_selection
## libraraies for classification
from sklearn.pipeline import Pipeline
import sklearn.metrics as skm
from sklearn.metrics import confusion_matrix, accuracy_score
from sklearn.linear_model import LogisticRegression
from sklearn.neighbors import KNeighborsClassifier
from sklearn.svm import SVC
from sklearn.tree import DecisionTreeClassifier
from sklearn.neural_network import MLPClassifier
from sklearn.ensemble import RandomForestClassifier
## for saving model
import pickle
## detokenization
from nltk.tokenize.treebank import TreebankWordDetokenizer
## for word embedding with gensim
import gensim
import gensim.downloader as gensim_api
from gensim.models import Word2Vec
from gensim.models import KeyedVectors
from keras.preprocessing.text import Tokenizer
from keras.preprocessing.sequence import pad_sequences
## for word embedding with Spacy
# import spacy
# import en_core_web_lg
## for deep learning
from keras.models import load_model
from keras.models import Model, Sequential
from keras.callbacks import EarlyStopping, ModelCheckpoint
from keras.layers import Conv1D, Dense, Input, LSTM, Embedding, Dropout, Activation, MaxPooling1D
from tensorflow.keras import models, layers, preprocessing as kprocessing
from tensorflow.keras import backend as K
import tensorflow as tf
import keras
from keras.layers import Lambda
import tensorflow as tf
from keras.models import model_from_json
## for bert language model
#import transformers
"""## Loading the dataset:"""
df_all = pd.read_csv("/content/drive/MyDrive/NLP/Depression_Detection/data_cleaning/processed_data/processed_data.csv",
sep='\t', encoding='utf-8')
df_all
"""## Feature selection
In order to drop some columns and reduce the matrix dimensionality, we can carry out some Feature Selection, the process of selecting a subset of relevant variables. I will proceed as follows:
1. treat each category as binary (for example, the “depressive” category is 1 for the depressive tweets and 0 for non_depressive);
2. perform a Chi-Square test to determine whether a feature and the (binary) target are independent;
3. keep only the features with a certain p-value from the Chi-Square test.
This snippet of code is derived from https://towardsdatascience.com/text-classification-with-nlp-tf-idf-vs-word2vec-vs-bert-41ff868d1794
"""
y = y_train
X_names = cv.get_feature_names()
p_value_limit = 0.95
df_features = pd.DataFrame()
for cat in np.unique(y):
chi2, p = feature_selection.chi2(X_train_tfidf, y==cat)
df_features = df_features.append(pd.DataFrame(
{"feature":X_names, "score":1-p, "y":cat}))
df_features = df_features.sort_values(["y","score"],
ascending=[True,False])
df_features = df_features[df_features["score"]>p_value_limit]
X_names = df_features["feature"].unique().tolist()
print(len(X_names))
"""I reduced the number of features from 20018 to 688 by keeping the most statistically relevant ones. Let’s print some:"""
for cat in np.unique(y):
print("# {}:".format(cat))
print(" . selected features:",
len(df_features[df_features["y"]==cat]))
print(" . top features:", ",".join(df_features[df_features["y"]==cat]["feature"].values[:10]))
print(" ")
"""## Logistic Regression with TFIDF:
### Spliting data to train and test datasets:
"""
## split dataset to train and test
X_train, X_test, y_train, y_test = train_test_split(df_all['clean_text'], df_all['label'], test_size=0.3, random_state= 42)
X_train.shape, X_test.shape, y_train.shape, y_test.shape
"""### TF-IDF
TF-IDF (term frequency and inverse document frequency):
"""
## Creating the TF-IDF model
cv = TfidfVectorizer()
cv.fit(X_train.to_list())
dic_vocabulary = cv.vocabulary_
X_train_tfidf = cv.transform(X_train.to_list())
X_test_tfidf = cv.transform(X_test.to_list())
cv.inverse_transform(X_test_tfidf[0])
X_train_tfidf.shape
# ## Adding clean tweets to a list called corpus
# corpus = []
# corpus = [x for x in df_train['clean_text']]
# # corpus = df_train["clean_text"]
"""The feature matrix X_train_tfidf has a shape of 16,464 (Number of documents in training) x 20018 (Length of vocabulary) and it’s pretty sparse:"""
sns.heatmap(X_train_tfidf.todense()[:,np.random.randint(0,X_train_tfidf.shape[1],100)]==0, vmin=0, vmax=1, cbar=False).set_title('Sparse Matrix Sample')
"""In order to know the position of a certain word, we can look it up in the vocabulary:"""
word = "mental"
dic_vocabulary[word]
"""Build a scikit-learn pipeline: a sequential application of a list of transformations and a final estimator. Putting the Tf-Idf vectorizer and Logistic Regression classifier in a pipeline allows us to transform and predict test data in just one step."""
# classifier = LogisticRegression(solver='liblinear', penalty='l1')
# ## pipeline
# model = Pipeline([("vectorizer", cv),
# ("classifier", classifier)])
# ## train classifier
# model["classifier"].fit(X_train, y_train)
# ## test
# predicted = model.predict(X_test)
# predicted_prob = model.predict_proba(X_test)
# ## creating the instance of the models
lr = LogisticRegression(solver='liblinear', penalty='l1')
## fitting the model
print(lr.fit(X_train_tfidf, y_train.to_list()))
## Save the Modle to file in the current working directory
LogisticReg = "/content/drive/MyDrive/NLP/Depression_Detection/modeling/model_LogReg.pkl"
with open(LogisticReg, 'wb') as file:
pickle.dump(lr, file)
## Load the Model back from file
with open(LogisticReg, 'rb') as file:
lr = pickle.load(file)
lr
## Test
y_pred_lr = lr.predict(X_test_tfidf)
probs = lr.predict_proba(X_test_tfidf)
classes = np.unique(y_test.to_list())
y_test_array = pd.get_dummies(y_test, drop_first=False).values
"""## Evaluate the performance:
* **Accuracy:** the fraction of predictions the model got right.
* **Confusion Matrix:** a summary table that breaks down the number of correct and incorrect predictions by each class.
* **ROC:** a plot that illustrates the true positive rate against the false positive rate at various threshold settings. The area under the curve (AUC) indicates the probability that the classifier will rank a randomly chosen positive observation higher than a randomly chosen negative one.
* **Precision:** the fraction of relevant instances among the retrieved instances.
* **Recall:** the fraction of the total amount of relevant instances that were actually retrieved.
"""
def conf_matrix_acc(y_true, y_pred):
## Plot confusion matrix
cm = confusion_matrix(y_true, y_pred)
fig, ax = plt.subplots()
sns.heatmap(cm, annot=True, fmt='d', ax=ax, cmap=plt.cm.Blues,
cbar=False)
ax.set(xlabel="Pred", ylabel="True", xticklabels=classes,
yticklabels=classes, title="Confusion matrix")
plt.yticks(rotation=0)
print("=========================================")
print(f'Accuracy score is : {accuracy_score(y_true, y_pred)}')
print("=========================================")
print("Detail:")
print(skm.classification_report(y_true, y_pred))
## Plot ROC and precision-recall curve
def roc_precision_auc():
fig, ax = plt.subplots(nrows=1, ncols=2)
## Plot roc
for i in range(len(classes)):
fpr, tpr, thresholds = skm.roc_curve(y_test_array[:,i],
probs[:,i])
ax[0].plot(fpr, tpr, lw=3,
label='{0} (area={1:0.2f})'.format(classes[i],
skm.auc(fpr, tpr))
)
ax[0].plot([0,1], [0,1], color='navy', lw=3, linestyle='--')
ax[0].set(xlim=[-0.05,1.0], ylim=[0.0,1.05],
xlabel='False Positive Rate',
ylabel="True Positive Rate (Recall)",
title="Receiver operating characteristic")
ax[0].legend(loc="lower right")
ax[0].grid(True)
## Plot precision-recall curve
for i in range(len(classes)):
precision, recall, thresholds = skm.precision_recall_curve(
y_test_array[:,i], probs[:,i])
ax[1].plot(recall, precision, lw=3,
label='{0} (area={1:0.2f})'.format(classes[i],
skm.auc(recall, precision))
)
ax[1].set(xlim=[0.0,1.05], ylim=[0.0,1.05], xlabel='Recall',
ylabel="Precision", title="Precision-Recall curve")
ax[1].legend(loc="best")
ax[1].grid(True)
plt.show()
#plt.savefig('/content/drive/MyDrive/NLP/Depression_Detection/modeling/ROC_Precision_LR.png')
plt.savefig('/content/drive/MyDrive/NLP/Depression_Detection/modeling/ROC_Precision_SVM.png')
## AUC score
print(f'AUC score is : {skm.roc_auc_score(Y_test, probs[:,1])}')
conf_matrix_acc(y_test.to_list(),y_pred_lr)
roc_precision_auc()
"""## Bidirectional LSTM:
In Python, you can load a pre-trained Word Embedding model from genism-data like this:
"""
nlp_pre = gensim_api.load("word2vec-google-news-300")
word = "anxiety"
fig = plt.figure()
## word embedding
tot_words = [word] + [tupla[0] for tupla in
nlp_pre.most_similar(word, topn=20)]
X = nlp_pre[tot_words]
## pca to reduce dimensionality from 300 to 3
pca = manifold.TSNE(perplexity=40, n_components=3, init='pca')
X = pca.fit_transform(X)
## create dtf
dtf_ = pd.DataFrame(X, index=tot_words, columns=["x","y","z"])
dtf_["input"] = 0
dtf_["input"].iloc[0:1] = 1
## plot 3d
from mpl_toolkits.mplot3d import Axes3D
ax = fig.add_subplot(111, projection='3d')
ax.scatter(dtf_[dtf_["input"]==0]['x'],
dtf_[dtf_["input"]==0]['y'],
dtf_[dtf_["input"]==0]['z'], c="black")
ax.scatter(dtf_[dtf_["input"]==1]['x'],
dtf_[dtf_["input"]==1]['y'],
dtf_[dtf_["input"]==1]['z'], c="red")
ax.set(xlabel=None, ylabel=None, zlabel=None, xticklabels=[],
yticklabels=[], zticklabels=[])
for label, row in dtf_[["x","y","z"]].iterrows():
x, y, z = row
ax.text(x, y, z, s=label)
"""Instead of using a pre-trained model, I am going to fit my own Word2Vec on the training data corpus with gensim. Before fitting the model, the corpus needs to be transformed into a list of lists of n-grams. In this particular case, I’ll try to capture unigrams (“york”), bigrams (“new york”), and trigrams (“new york city”)."""
## split dataset
dtf_train, dtf_test = train_test_split(df_all, test_size=0.3)
## get target
y_train = dtf_train["label"].values
y_test = dtf_test["label"].values
corpus = []
corpus = [x for x in dtf_train['clean_text']]
## create list of lists of unigrams
lst_corpus = []
for string in corpus:
lst_words = str(string).split()
lst_grams = [" ".join(lst_words[i:i+1])
for i in range(0, len(lst_words), 1)]
lst_corpus.append(lst_grams)
## detect bigrams and trigrams
bigrams_detector = gensim.models.phrases.Phrases(lst_corpus,
delimiter=" ".encode(), min_count=5, threshold=10)
bigrams_detector = gensim.models.phrases.Phraser(bigrams_detector)
trigrams_detector = gensim.models.phrases.Phrases(bigrams_detector[lst_corpus],
delimiter=" ".encode(), min_count=5, threshold=10)
trigrams_detector = gensim.models.phrases.Phraser(trigrams_detector)
"""When fitting the Word2Vec, you need to specify:
* the target size of the word vectors, I’ll use 300;
* the window, or the maximum distance between the current and predicted word within a sentence, I’ll use the mean length of text in the corpus;
* the training algorithm, I’ll use skip-grams (sg=1) as in general it has better results.
"""
## fit w2v
nlp = gensim.models.word2vec.Word2Vec(lst_corpus, size=300,
window=8, min_count=1, sg=1, iter=30)
"""We have our embedding model, so we can select any word from the corpus and transform it into a vector."""
word = "anxiety"
nlp[word].shape
"""We can even use it to visualize a word and its context into a smaller dimensional space (2D or 3D) by applying any dimensionality reduction algorithm (i.e. TSNE)."""
word = "anxiety"
fig = plt.figure()
## word embedding
tot_words = [word] + [tupla[0] for tupla in
nlp.most_similar(word, topn=20)]
X = nlp[tot_words]
## pca to reduce dimensionality from 300 to 3
pca = manifold.TSNE(perplexity=40, n_components=3, init='pca')
X = pca.fit_transform(X)
## create dtf
dtf_ = pd.DataFrame(X, index=tot_words, columns=["x","y","z"])
dtf_["input"] = 0
dtf_["input"].iloc[0:1] = 1
## plot 3d
from mpl_toolkits.mplot3d import Axes3D
ax = fig.add_subplot(111, projection='3d')
ax.scatter(dtf_[dtf_["input"]==0]['x'],
dtf_[dtf_["input"]==0]['y'],
dtf_[dtf_["input"]==0]['z'], c="black")
ax.scatter(dtf_[dtf_["input"]==1]['x'],
dtf_[dtf_["input"]==1]['y'],
dtf_[dtf_["input"]==1]['z'], c="red")
ax.set(xlabel=None, ylabel=None, zlabel=None, xticklabels=[],
yticklabels=[], zticklabels=[])
for label, row in dtf_[["x","y","z"]].iterrows():
x, y, z = row
ax.text(x, y, z, s=label)
"""The word vectors can be used in a neural network as weights in the follwing procedure:
1. Transform the corpus into padded sequences of word ids to get a feature matrix.
2. Create an embedding matrix so that the vector of the word with id N is located at the Nth row.
3. Build a neural network with an embedding layer that weighs every word in the sequences with the corresponding vector.
**Feature Engineering:** by transforming the same preprocessed corpus (list of lists of n-grams) given to the Word2Vec into a list of sequences using tensorflow/keras:
"""
## tokenize text
tokenizer = kprocessing.text.Tokenizer(lower=True, split=' ',
oov_token="NaN",
filters='!"#$%&()*+,-./:;<=>?@[\\]^_`{|}~\t\n')
tokenizer.fit_on_texts(lst_corpus)
dic_vocabulary = tokenizer.word_index
## create sequence
lst_text2seq= tokenizer.texts_to_sequences(lst_corpus)
## padding sequence
X_train = kprocessing.sequence.pad_sequences(lst_text2seq,
maxlen=35, padding="post", truncating="post")
X_train.shape
"""The feature matrix X_train has a shape of 16559 x 35 (Number of sequences x Sequences max length). Let’s visualize it:"""
sns.heatmap(X_train==0, vmin=0, vmax=1, cbar=False)
plt.show()
"""Every text in the corpus is now an id sequence with length 35. For instance, if a text had 20 tokens in it, then the sequence is composed of 20 ids + 15 0s, which is the padding element (while the id for word not in the vocabulary is 1)
Let’s print how a text from the train set has been transformed into a sequence with the padding and the vocabulary.
"""
i = 8
## list of text: ["I like this", ...]
len_txt = len(dtf_train["clean_text"].iloc[i].split())
print("from: ", dtf_train["clean_text"].iloc[i], "| len:", len_txt)
## sequence of token ids: [[1, 2, 3], ...]
len_tokens = len(X_train[i])
print("to: ", X_train[i], "| len:", len(X_train[i]))
## vocabulary: {"I":1, "like":2, "this":3, ...}
print("check: ", dtf_train["clean_text"].iloc[i].split()[0],
" -- idx in vocabulary -->",
dic_vocabulary[dtf_train["clean_text"].iloc[i].split()[0]])
print("vocabulary: ", dict(list(dic_vocabulary.items())[0:5]), "... (padding element, 0)")
corpus = dtf_test["clean_text"]
## create list of n-grams
lst_corpus = []
for string in corpus:
lst_words = str(string).split()
lst_grams = [" ".join(lst_words[i:i+1]) for i in range(0,
len(lst_words), 1)]
lst_corpus.append(lst_grams)
## detect common bigrams and trigrams using the fitted detectors
lst_corpus = list(bigrams_detector[lst_corpus])
lst_corpus = list(trigrams_detector[lst_corpus])
## text to sequence with the fitted tokenizer
lst_text2seq = tokenizer.texts_to_sequences(lst_corpus)
## padding sequence
X_test = kprocessing.sequence.pad_sequences(lst_text2seq, maxlen=35,
padding="post", truncating="post")
X_test.shape
sns.heatmap(X_test==0, vmin=0, vmax=1, cbar=False)
plt.show()
"""We’ve got our X_train and X_test, now we need to create the embedding matrix that will be used as a weight matrix in the neural network."""
## start the matrix (length of vocabulary x vector size) with all 0s
embeddings = np.zeros((len(dic_vocabulary)+1, 300))
for word,idx in dic_vocabulary.items():
## update the row with vector
try:
embeddings[idx] = nlp[word]
## if word not in model then skip and the row stays all 0s
except:
pass
embeddings.shape
"""That code generates a matrix of shape 20,050 x 300 (Length of vocabulary extracted from the corpus x Vector size). It can be navigated by word id, which can be obtained from the vocabulary."""
word = "anxiety"
print("dic[word]:", dic_vocabulary[word], "|idx")
print("embeddings[idx]:", embeddings[dic_vocabulary[word]].shape,
"|vector")
"""### Deep Learning:
It’s finally time to build a deep learning model. I’m going to use the embedding matrix in the first Embedding layer of the neural network that I will build and train to classify the news. Each id in the input sequence will be used as the index to access the embedding matrix. The output of this Embedding layer will be a 2D matrix with a word vector for each word id in the input sequence (Sequence length x Vector size). Let’s use the sentence “I like this article” as an example:
My neural network shall be structured as follows:
* An Embedding layer that takes the sequences as input and the word vectors as weights, just as described before.
* A simple Attention layer that won’t affect the predictions but it’s going to capture the weights of each instance and allow us to build a nice explainer (it isn't necessary for the predictions, just for the explainability, so you can skip it).
* Two layers of Bidirectional LSTM to model the order of words in a sequence in both directions.
* Two final dense layers that will predict the probability of each category.
"""
## code attention layer
def attention_layer(inputs, neurons):
x = layers.Permute((2,1))(inputs)
x = layers.Dense(neurons, activation="softmax")(x)
x = layers.Permute((2,1), name="attention")(x)
x = layers.multiply([inputs, x])
return x
## input
x_in = layers.Input(shape=(35,))
## embedding
x = layers.Embedding(input_dim=embeddings.shape[0],
output_dim=embeddings.shape[1],
weights=[embeddings],
input_length=35, trainable=False)(x_in)
## apply attention
x = attention_layer(x, neurons=35)
## 2 layers of bidirectional lstm
x = layers.Bidirectional(layers.LSTM(units=35, dropout=0.2,
return_sequences=True))(x)
x = layers.Bidirectional(layers.LSTM(units=35, dropout=0.2))(x)
## final dense layers
x = layers.Dense(64, activation='relu')(x)
y_out = layers.Dense(1, activation='sigmoid')(x)
## compile
model = models.Model(x_in, y_out)
model.compile(loss='binary_crossentropy',
optimizer='adam', metrics=['accuracy'])
model.summary()
## encode y
dic_y_mapping = {n:label for n,label in
enumerate(np.unique(y_train))}
inverse_dic = {v:k for k,v in dic_y_mapping.items()}
y_train = np.array([inverse_dic[y] for y in y_train])
## train
training = model.fit(x=X_train, y=y_train, batch_size=256,
epochs=30, shuffle=True, verbose=0,
validation_split=0.3)
## plot loss and accuracy
metrics = [k for k in training.history.keys() if ("loss" not in k) and ("val" not in k)]
fig, ax = plt.subplots(nrows=1, ncols=2, sharey=True)
ax[0].set(title="Training")
ax11 = ax[0].twinx()
ax[0].plot(training.history['loss'], color='black')
ax[0].set_xlabel('Epochs')
ax[0].set_ylabel('Loss', color='black')
for metric in metrics:
ax11.plot(training.history[metric], label=metric)
ax11.set_ylabel("Score", color='steelblue')
ax11.legend()
ax[1].set(title="Validation")
ax22 = ax[1].twinx()
ax[1].plot(training.history['val_loss'], color='black')
ax[1].set_xlabel('Epochs')
ax[1].set_ylabel('Loss', color='black')
for metric in metrics:
ax22.plot(training.history['val_'+metric], label=metric)
ax22.set_ylabel("Score", color="steelblue")
plt.savefig('/content/drive/MyDrive/NLP/Depression_Detection/modeling/loss_accuracy_LSTM_3.png')
plt.show()
# serialize model to JSON
model_json = model.to_json()
with open("/content/drive/MyDrive/NLP/Depression_Detection/modeling/model.json", "w") as json_file:
json_file.write(model_json)
# serialize weights to HDF5
model.save_weights("/content/drive/MyDrive/NLP/Depression_Detection/modeling/model.h5")
print("Saved model to disk")
loaded_model = model_from_json(open("/content/drive/MyDrive/NLP/Depression_Detection/modeling/model.json", "r").read(),
custom_objects={'tf': tf})
json_file.close()
# load weights into new model
loaded_model.load_weights("/content/drive/MyDrive/NLP/Depression_Detection/modeling/model.h5")
print("Loaded model from disk")
labels_pred = model.predict(X_test)
labels_pred = np.round(labels_pred.flatten())
accuracy = accuracy_score(y_test, labels_pred)
classes = np.unique(y_test)
print("Accuracy: %.2f%%" % (accuracy*100))
def conf_matrix_acc2(y_true, y_pred):
## Plot confusion matrix
cm = confusion_matrix(y_test, y_pred)
fig, ax = plt.subplots()
sns.heatmap(cm, annot=True, fmt='d', ax=ax, cmap=plt.cm.Blues,
cbar=False)
ax.set(xlabel="Pred", ylabel="True", xticklabels=classes,
yticklabels=classes, title="Confusion matrix")
plt.yticks(rotation=0)
print("=========================================")
print(f'Accuracy score is : {accuracy_score(y_true, y_pred)}')
print("=========================================")
print("Detail:")
print(skm.classification_report(y_test, y_pred))
conf_matrix_acc2(y_test, labels_pred)
# classes = np.unique(y_test)
# y_test_array = pd.get_dummies(y_test, drop_first=False).values
# predicted_prob = model.predict_on_batch(X_test)
# ## Plot ROC and precision-recall curve
# def roc_precision_auc2():
# fig, ax = plt.subplots(nrows=1, ncols=2)
# ## Plot roc
# for i in range(len(classes)):
# fpr, tpr, thresholds = skm.roc_curve(y_test_array[:,i],
# predicted_prob[:,i])
# ax[0].plot(fpr, tpr, lw=3,
# label='{0} (area={1:0.2f})'.format(classes[i],
# skm.auc(fpr, tpr))
# )
# ax[0].plot([0,1], [0,1], color='navy', lw=3, linestyle='--')
# ax[0].set(xlim=[-0.05,1.0], ylim=[0.0,1.05],
# xlabel='False Positive Rate',
# ylabel="True Positive Rate (Recall)",
# title="Receiver operating characteristic")
# ax[0].legend(loc="lower right")
# ax[0].grid(True)
# ## Plot precision-recall curve
# for i in range(len(classes)):
# precision, recall, thresholds = skm.precision_recall_curve(
# y_test_array[:,i], probs[:,i])
# ax[1].plot(recall, precision, lw=3,
# label='{0} (area={1:0.2f})'.format(classes[i],
# skm.auc(recall, precision))
# )
# ax[1].set(xlim=[0.0,1.05], ylim=[0.0,1.05], xlabel='Recall',
# ylabel="Precision", title="Precision-Recall curve")
# ax[1].legend(loc="best")
# ax[1].grid(True)
# plt.show()
# #plt.savefig('/content/drive/MyDrive/NLP/Depression_Detection/modeling/ROC_Precision_LR.png')
# #plt.savefig('/content/drive/MyDrive/NLP/Depression_Detection/modeling/ROC_Precision_LSTM.png')
# ## AUC score
# print(f'AUC score is : {skm.roc_auc_score(y_test, probs[:,1])}') |