epitoc2 / config.json
lucascamillomd's picture
Sync epitoc2
27e2f4e verified
Raw
History Blame Contribute Delete
1.09 kB
{
"approved_by_author": "\u231b",
"citation": "Teschendorff, Andrew E. \"A comparison of epigenetic mitotic-like clocks for cancer risk prediction.\" Genome Medicine 12 (2020): 56.",
"citations": 155,
"citations_date": "2026-07-05",
"clock_name": "epitoc2",
"data_type": "DNA methylation",
"doi": "https://doi.org/10.1186/s13073-020-00752-3",
"journal": "Genome Medicine",
"last_author": "Andrew E. Teschendorff",
"model_type": "dynamic methylation transmission model",
"n_features": 163,
"notes": "Dynamic methylation-transmission model returning total cumulative stem-cell divisions per stem cell; an intrinsic rate additionally requires chronological age but is not this implementation's returned value.",
"platform": [
"Illumina 450K"
],
"population": "adults",
"predicts": [
"mitotic age"
],
"preprocess": "nan_to_zero",
"reference_values": true,
"research_only": null,
"species": "Homo sapiens",
"tissue": [
"whole blood"
],
"training_target": [
"chronological age"
],
"unit": [
"cell divisions per stem cell"
],
"version": "0.5.0",
"year": 2020
}