Daily Papers

The increasing adoption of autonomous coding agents accelerates software development but also introduces scoped security risks within high-impact file paths that can outpace traditional human review capacity. While prior research has primarily evaluated these systems in terms of functional correctness and productivity, this paper presents a large-scale empirical study using the AIDev dataset to systematically characterize security code smells in agent-generated pull requests (PRs). Through a combination of a validated LLM-as-a-judge framework and manual qualitative analysis, we identify and classify security misconfigurations across 16,112 file changes spanning 4,022 pull requests. Our results reveal that 38.9% of agent-generated PRs contain at least one security smell, with supply chain integrity issues accounting for 82.3% of all detected security smells. Furthermore, hard-coded credentials constitute 99.6% of all critical-severity security smells. Crucially, we find that human collaborators are responsible for introducing 67.6% of genuine leaked secrets within these agent-assisted workflows, while existing automated and human review processes fail to detect 81.1% of these credentials prior to integration. These findings highlight substantial security risks in agent-assisted software development workflows and suggest a potential reduction in developer vigilance. They also underscore the urgent need for context-aware security guardrails implemented directly at the point of human-AI collaboration.

This study presents a quantitative evaluation of the code quality and security of five prominent Large Language Models (LLMs): Claude Sonnet 4, Claude 3.7 Sonnet, GPT-4o, Llama 3.2 90B, and OpenCoder 8B. While prior research has assessed the functional performance of LLM-generated code, this research tested LLM output from 4,442 Java coding assignments through comprehensive static analysis using SonarQube. The findings suggest that although LLMs can generate functional code, they also introduce a range of software defects, including bugs, security vulnerabilities, and code smells. These defects do not appear to be isolated; rather, they may represent shared weaknesses stemming from systemic limitations within current LLM code generation methods. In particular, critically severe issues, such as hard-coded passwords and path traversal vulnerabilities, were observed across multiple models. These results indicate that LLM-generated code requires verification in order to be considered production-ready. This study found no direct correlation between a model's functional performance (measured by Pass@1 rate of unit tests) and the overall quality and security of its generated code, measured by the number of SonarQube issues in benchmark solutions that passed the functional tests. This suggests that functional benchmark performance score is not a good indicator of overall code quality and security. The goal of this study is not to rank LLM performance but to highlight that all evaluated models appear to share certain weaknesses. Consequently, these findings support the view that static analysis can be a valuable instrument for detecting latent defects and an important safeguard for organizations that deploy AI in software development.

Although Foundation Models (FMs), such as GPT-4, are increasingly used in domains like finance and software engineering, reliance on textual interfaces limits these models' real-world interaction. To address this, FM providers introduced tool calling-triggering a proliferation of frameworks with distinct tool interfaces. In late 2024, Anthropic introduced the Model Context Protocol (MCP) to standardize this tool ecosystem, which has become the de facto standard with over eight million weekly SDK downloads. Despite its adoption, MCP's AI-driven, non-deterministic control flow introduces new risks to sustainability, security, and maintainability, warranting closer examination. Towards this end, we present the first large-scale empirical study of MCP servers. Using state-of-the-art health metrics and a hybrid analysis pipeline, combining a general-purpose static analysis tool with an MCP-specific scanner, we evaluate 1,899 open-source MCP servers to assess their health, security, and maintainability. Despite MCP servers demonstrating strong health metrics, we identify eight distinct vulnerabilities - only three overlapping with traditional software vulnerabilities. Additionally, 7.2% of servers contain general vulnerabilities and 5.5% exhibit MCP-specific tool poisoning. Regarding maintainability, while 66% exhibit code smells, 14.4% contain nine bug patterns overlapping with traditional open-source software projects. These findings highlight the need for MCP-specific vulnerability detection techniques while reaffirming the value of traditional analysis and refactoring practices.

AI coding assistants are now widely used in software development. Software developers increasingly integrate AI-generated code into their codebases to improve productivity. Prior studies have shown that AI-generated code may contain code quality issues under controlled settings. However, we still know little about the real-world impact of AI-generated code on software quality and maintenance after it is introduced into production repositories. In other words, it remains unclear whether such issues are quickly fixed or persist and accumulate over time as technical debt. In this paper, we conduct a large-scale empirical study on the technical debt introduced by AI coding assistants in the wild. To achieve that, we built a dataset of 302.6k verified AI-authored commits from 6,299 GitHub repositories, covering five widely used AI coding assistants. For each commit, we run static analysis before and after the change to precisely attribute which code smells, correctness issues, and security issues the AI introduced. We then track each introduced issue from the introducing commit to the latest repository revision to study its lifecycle. Our results show that we identified 484,366 distinct issues, and that code smells are by far the most common type, accounting for 89.3% of all issues. We also find that more than 15% of commits from every AI coding assistant introduce at least one issue, although the rates vary across tools. More importantly, 22.7% of tracked AI-introduced issues still survive at the latest version of the repository. These findings show that AI-generated code can introduce long-term maintenance costs into real software projects and highlight the need for stronger quality assurance in AI-assisted development.

The rapid adoption of AI coding agents for software development has raised important questions about the quality and maintainability of the code they produce. While prior studies have examined AI-generated source code, the impact of AI coding agents on build systems-a critical yet understudied component of the software lifecycle-remains largely unexplored. This data mining challenge focuses on AIDev, the first large-scale, openly available dataset capturing agent-authored pull requests (Agentic-PRs) from real-world GitHub repositories. Our paper leverages this dataset to investigate (RQ1) whether AI coding agents generate build code with quality issues (e.g., code smells), (RQ2) to what extent AI agents can eliminate code smells from build code, and (RQ3) to what extent Agentic-PRs are accepted by developers. We identified 364 maintainability and security-related build smells across varying severity levels, indicating that AI-generated build code can introduce quality issues-such as lack of error handling, and hardcoded paths or URLs-while also, in some cases, removing existing smells through refactorings (e.g., Pull Up Module and Externalize Properties). Notably, more than 61\% of Agentic-PRs are approved and merged with minimal human intervention. This dual impact underscores the need for future research on AI-aware build code quality assessment to systematically evaluate, guide, and govern AI-generated build systems code.

Model-sharing platforms, such as Hugging Face, ModelScope, and OpenCSG, have become central to modern machine learning development, enabling developers to share, load, and fine-tune pre-trained models with minimal effort. However, the flexibility of these ecosystems introduces a critical security concern: the execution of untrusted code during model loading (i.e., via trust_remote_code or trust_repo). In this work, we conduct the first large-scale empirical study of custom model loading practices across five major model-sharing platforms to assess their prevalence, associated risks, and developer perceptions. We first quantify the frequency with which models require custom code to function and identify those that execute arbitrary Python files during loading. We then apply three complementary static analysis tools: Bandit, CodeQL, and Semgrep, to detect security smells and potential vulnerabilities, categorizing our findings by CWE identifiers to provide a standardized risk taxonomy. We also use YARA to identify malicious patterns and payload signatures. In parallel, we systematically analyze the documentation, API design, and safety mechanisms of each platform to understand their mitigation strategies and enforcement levels. Finally, we conduct a qualitative analysis of over 600 developer discussions from GitHub, Hugging Face, and PyTorch Hub forums, as well as Stack Overflow, to capture community concerns and misconceptions regarding security and usability. Our findings reveal widespread reliance on unsafe defaults, uneven security enforcement across platforms, and persistent confusion among developers about the implications of executing remote code. We conclude with actionable recommendations for designing safer model-sharing infrastructures and striking a balance between usability and security in future AI ecosystems.

Code smells are symptoms of poor design and implementation choices, which might hinder comprehension, increase code complexity and fault-proneness and decrease maintainability of software systems. The aim of our study was to perform a triangulation of bibliometric and thematic analysis on code smell literature production. The search was performed on Scopus (Elsevier, Netherlands) database using the search string code smells which resulted in 442 publications. The Go-to statement was the first bad code smells identified in software engineering history in 1968. The literature production trend has been positive. The most productive countries were the United States, Italy and Brazil. Eight research themes were identified: Managing software maintenance, Smell detection-based software refactoring, Architectural smells, Improving software quality with multi-objective approaches, Technical debt and its instance, Quality improvement/assurance with mining software repositories, Programming education, Integrating the concepts of anti-pattern, design defects and design smells. Some research gaps also emerged, namely, New uncatalogued smell identification; Smell propagation from architectural, design, code to test, and other possible smells; and Identification of good smells. The results of our study can help code smell researchers and practitioners understand the broader aspects of code smells research and its translation to practice.

Code Agents have achieved remarkable advances in recent years, exhibiting strong capabilities across a wide range of software engineering tasks. However, their misuse often produces bloated and disorganized code that impairing readability, extensibility, and robustness. Despite this risk, existing benchmarks largely evaluate functional correctness rather than long-term maintainability of code agents. In this paper, we propose SmellBench, an extensible code refactoring benchmark that proactively injects code smells into clean code snippets from real-world repositories. This design enables the generation of controlled, high-quality, and diverse refactoring cases with human-written ground truth. Specifically, it contains 294 cases spanning 7 popular smell types, 3 difficulty levels, 2 instruction settings across 7 real-world repositories. We further design 3 evaluation aspects covering functional correctness, localization ability, and refactoring quality assessment. Experiments with 2 popular agents and 6 large langauge models (LLMs) show that the best combination - Qwen Code + Claude Sonnet 4.5 - achieved only a 50.34 score of smell elimination. Further analysis reveals that this gap arises from a focus on local code smells and a lack of cross-file understanding, which hinders comprehensive smell elimination.

As one of the most popular dynamic languages, Python experiences a decrease in readability and maintainability when code smells are present. Recent advancements in Large Language Models have sparked growing interest in AI-enabled tools for both code generation and refactoring. GitHub Copilot is one such tool that has gained widespread usage. Copilot Chat, released on September 2023, functions as an interactive tool aims at facilitating natural language-powered coding. However, limited attention has been given to understanding code smells in Copilot-generated Python code and Copilot's ability to fix the code smells it generates. To this end, we built a dataset comprising 102 code smells in Copilot-generated Python code. Our aim is to first explore the occurrence of code smells in Copilot-generated Python code and then evaluate the effectiveness of Copilot in fixing these code smells employing different prompts. The results show that 8 out of 10 types of Python smells can be detected in Copilot-generated Python code, among which Multiply-Nested Container is the most common one. For these code smells, Copilot Chat achieves a highest fixing rate of 87.1%, showing promise in fixing Python code smells generated by Copilot itself. Besides, the effectiveness of Copilot Chat in fixing these smells can be improved with the provision of more detailed prompts. However, using Copilot Chat to fix these smells might introduce new code smells.

Large Language Models (LLMs) have shown significant potential in automating software engineering tasks, particularly in code generation. However, current evaluation benchmarks, which primarily focus on accuracy, fall short in assessing the quality of the code generated by these models, specifically their tendency to produce code smells. To address this limitation, we introduce CodeSmellEval, a benchmark designed to evaluate the propensity of LLMs for generating code smells. Our benchmark includes a novel metric: Propensity Smelly Score (PSC), and a curated dataset of method-level code smells: CodeSmellData. To demonstrate the use of CodeSmellEval, we conducted a case study with two state-of-the-art LLMs, CodeLlama and Mistral. The results reveal that both models tend to generate code smells, such as simplifiable-condition and consider-merging-isinstance. These findings highlight the effectiveness of our benchmark in evaluating LLMs, providing valuable insights into their reliability and their propensity to introduce code smells in code generation tasks.

Machine learning (ML) codebases face unprecedented challenges in maintaining code quality and sustainability as their complexity grows exponentially. While traditional code smell detection tools exist, they fail to address ML-specific issues that can significantly impact model performance, reproducibility, and maintainability. This paper introduces MLScent, a novel static analysis tool that leverages sophisticated Abstract Syntax Tree (AST) analysis to detect anti-patterns and code smells specific to ML projects. MLScent implements 76 distinct detectors across major ML frameworks including TensorFlow (13 detectors), PyTorch (12 detectors), Scikit-learn (9 detectors), and Hugging Face (10 detectors), along with data science libraries like Pandas and NumPy (8 detectors each). The tool's architecture also integrates general ML smell detection (16 detectors), and specialized analysis for data preprocessing and model training workflows. Our evaluation demonstrates MLScent's effectiveness through both quantitative classification metrics and qualitative assessment via user studies feedback with ML practitioners. Results show high accuracy in identifying framework-specific anti-patterns, data handling issues, and general ML code smells across real-world projects.

Vibe coding is a new programming paradigm in which human engineers instruct large language model (LLM) agents to complete complex coding tasks with little supervision. Although it is increasingly adopted, are vibe coding outputs really safe to deploy in production? To answer this question, we propose SU S VI B E S, a benchmark consisting of 200 feature-request software engineering tasks from real-world open-source projects, which, when given to human programmers, led to vulnerable implementations. We evaluate multiple widely used coding agents with frontier models on this benchmark. Disturbingly, all agents perform poorly in terms of software security. Although 61% of the solutions from SWE-Agent with Claude 4 Sonnet are functionally correct, only 10.5% are secure. Further experiments demonstrate that preliminary security strategies, such as augmenting the feature request with vulnerability hints, cannot mitigate these security issues. Our findings raise serious concerns about the widespread adoption of vibe-coding, particularly in security-sensitive applications.

Large language models (LLMs) are increasingly deployed as autonomous agents that interact with external tools and services via the Model Context Protocol (MCP), a standardized interface for dynamic tool invocation. While MCP simplifies integration, it also expands the attack surface and enables generic exploits across multiple servers. Despite prior work on malicious MCP servers, the vulnerability landscape of MCP servers remains underexplored. In this work, we systematically analyze MCP server vulnerabilities, focusing on metadata characteristics, vulnerable code patterns, and community responses. Our study reveals that taint-style vulnerabilities constitute a substantial fraction of MCP server vulnerabilities, require significant code modifications to remediate, and are met with slow community responses. Motivated by these findings, we propose SPELLSMITH, presenting a novel textbased avenue for shielding taint-style vulnerabilities in MCP servers. In particular, SPELLSMITH analyzes the high-risk capabilities exposed by an MCP server and combines them with tool descriptions and parameter semantics to identify potential taint-style vulnerability risks, thereby constructing a tool-level risk profile. Then, SPELLSMITH leverages the Description property of the protocol to embed behavioral guidance (Description Enhancement Module) and exploits LLMs' self-reflection capabilities (Self-Reflection Module) to iteratively evaluate and refine outputs. By strengthening LLM internal decision-making, SPELLSMITH provides an active and unified mitigation strategy that generalizes across multiple vulnerabilities, reducing reliance on context-specific code-level fixes. Our experiments demonstrate that SPELLSMITH effectively mitigates taint-style vulnerability exploitation in MCP servers, highlighting its practical applicability and advantages over traditional code-level mitigations.

Modern code generation tools, utilizing AI models like Large Language Models (LLMs), have gained popularity for producing functional code. However, their usage presents security challenges, often resulting in insecure code merging into the code base. Evaluating the quality of generated code, especially its security, is crucial. While prior research explored various aspects of code generation, the focus on security has been limited, mostly examining code produced in controlled environments rather than real-world scenarios. To address this gap, we conducted an empirical study, analyzing code snippets generated by GitHub Copilot from GitHub projects. Our analysis identified 452 snippets generated by Copilot, revealing a high likelihood of security issues, with 32.8% of Python and 24.5% of JavaScript snippets affected. These issues span 38 different Common Weakness Enumeration (CWE) categories, including significant ones like CWE-330: Use of Insufficiently Random Values, CWE-78: OS Command Injection, and CWE-94: Improper Control of Generation of Code. Notably, eight CWEs are among the 2023 CWE Top-25, highlighting their severity. Our findings confirm that developers should be careful when adding code generated by Copilot and should also run appropriate security checks as they accept the suggested code. It also shows that practitioners should cultivate corresponding security awareness and skills.

AI coding agents set up projects by reading documentation and installing the dependencies it lists, without verifying their names, sources, or known vulnerabilities. By editing only a README, requirements file, or Makefile, an attacker can redirect the agent to an untrusted registry, a known-vulnerable version, or a wrong-but-plausible name: documentation becomes a vector for code execution. We present the first systematic evaluation of package-install-time supply-chain attacks delivered through ordinary project-setup documentation across production coding-agent harnesses, probing frontier models on twelve scenarios in five attack classes, grounded in documented incidents. The same model catches an attack through one harness and installs it through another: install-time security rests on the harness-model combination, not the model alone. Agents catch blatant typosquats reliably, but plausible separator-confusion names (azurecore for azure-core) slip through, and how often depends on the harness-model pairing. Source-based attacks like registry redirection are missed almost everywhere. The source blind spot recurs on npm and Cargo, where nearly every model installs the untrusted dependency; name detection carries over less consistently across ecosystems. Security-oriented prompts recover part of the gap but only for the dimension they name; a deterministic pre-install check that verifies names, sources, and versions before any code runs closes most of it.

Open source code is considered a common practice in modern software development. However, reusing other code allows bad actors to access a wide developers' community, hence the products that rely on it. Those attacks are categorized as supply chain attacks. Recent years saw a growing number of supply chain attacks that leverage open source during software development, relaying the download and installation procedures, whether automatic or manual. Over the years, many approaches have been invented for detecting vulnerable packages. However, it is uncommon to detect malicious code within packages. Those detection approaches can be broadly categorized as analyzes that use (dynamic) and do not use (static) code execution. Here, we introduce Malicious Source code Detection using Transformers (MSDT) algorithm. MSDT is a novel static analysis based on a deep learning method that detects real-world code injection cases to source code packages. In this study, we used MSDT and a dataset with over 600,000 different functions to embed various functions and applied a clustering algorithm to the resulting vectors, detecting the malicious functions by detecting the outliers. We evaluated MSDT's performance by conducting extensive experiments and demonstrated that our algorithm is capable of detecting functions that were injected with malicious code with precision@k values of up to 0.909.

As AI code assistants become increasingly integrated into software development workflows, understanding how their code compares to human-written programs is critical for ensuring reliability, maintainability, and security. In this paper, we present a large-scale comparison of code authored by human developers and three state-of-the-art LLMs, i.e., ChatGPT, DeepSeek-Coder, and Qwen-Coder, on multiple dimensions of software quality: code defects, security vulnerabilities, and structural complexity. Our evaluation spans over 500k code samples in two widely used languages, Python and Java, classifying defects via Orthogonal Defect Classification and security vulnerabilities using the Common Weakness Enumeration. We find that AI-generated code is generally simpler and more repetitive, yet more prone to unused constructs and hardcoded debugging, while human-written code exhibits greater structural complexity and a higher concentration of maintainability issues. Notably, AI-generated code also contains more high-risk security vulnerabilities. These findings highlight the distinct defect profiles of AI- and human-authored code and underscore the need for specialized quality assurance practices in AI-assisted programming.

With the growing popularity of Large Language Models (e.g. GitHub Copilot, ChatGPT, etc.) in software engineers' daily practices, it is important to ensure that the code generated by these tools is not only functionally correct but also free of vulnerabilities. Although LLMs can help developers to be more productive, prior empirical studies have shown that LLMs can generate insecure code. There are two contributing factors to the insecure code generation. First, existing datasets used to evaluate Large Language Models (LLMs) do not adequately represent genuine software engineering tasks sensitive to security. Instead, they are often based on competitive programming challenges or classroom-type coding tasks. In real-world applications, the code produced is integrated into larger codebases, introducing potential security risks. There's a clear absence of benchmarks that focus on evaluating the security of the generated code. Second, existing evaluation metrics primarily focus on the functional correctness of the generated code while ignoring security considerations. Metrics such as pass@k gauge the probability of obtaining the correct code in the top k suggestions. Other popular metrics like BLEU, CodeBLEU, ROUGE, and METEOR similarly emphasize functional accuracy, neglecting security implications. In light of these research gaps, in this paper, we described SALLM, a framework to benchmark LLMs' abilities to generate secure code systematically. This framework has three major components: a novel dataset of security-centric Python prompts, an evaluation environment to test the generated code, and novel metrics to evaluate the models' performance from the perspective of secure code generation.

In software development, the predominant emphasis on functionality often supersedes security concerns, a trend gaining momentum with AI-driven automation tools like GitHub Copilot. These tools significantly improve developers' efficiency in functional code development. Nevertheless, it remains a notable concern that such tools are also responsible for creating insecure code, predominantly because of pre-training on publicly available repositories with vulnerable code. Moreover, developers are called the "weakest link in the chain" since they have very minimal knowledge of code security. Although existing solutions provide a reasonable solution to vulnerable code, they must adequately describe and educate the developers on code security to ensure that the security issues are not repeated. Therefore we introduce a multipurpose code vulnerability analysis system SecRepair, powered by a large language model, CodeGen2 assisting the developer in identifying and generating fixed code along with a complete description of the vulnerability with a code comment. Our innovative methodology uses a reinforcement learning paradigm to generate code comments augmented by a semantic reward mechanism. Inspired by how humans fix code issues, we propose an instruction-based dataset suitable for vulnerability analysis with LLMs. We further identify zero-day and N-day vulnerabilities in 6 Open Source IoT Operating Systems on GitHub. Our findings underscore that incorporating reinforcement learning coupled with semantic reward augments our model's performance, thereby fortifying its capacity to address code vulnerabilities with improved efficacy.

Large Language Models (LLMs) have shown potential to enhance software development through automated code generation and refactoring, reducing development time and improving code quality. This study empirically evaluates StarCoder2, an LLM optimized for code generation, in refactoring code across 30 open-source Java projects. We compare StarCoder2's performance against human developers, focusing on (1) code quality improvements, (2) types and effectiveness of refactorings, and (3) enhancements through one-shot and chain-of-thought prompting. Our results indicate that StarCoder2 reduces code smells by 20.1% more than developers, excelling in systematic issues like Long Statement and Magic Number, while developers handle complex, context-dependent issues better. One-shot prompting increases the unit test pass rate by 6.15% and improves code smell reduction by 3.52%. Generating five refactorings per input further increases the pass rate by 28.8%, suggesting that combining one-shot prompting with multiple refactorings optimizes performance. These findings provide insights into StarCoder2's potential and best practices for integrating LLMs into software refactoring, supporting more efficient and effective code improvement in real-world applications.

AI assistants produce vulnerable code in 45% of security-relevant scenarios, introducing flaws into production systems at scale. Yet existing secure coding datasets fall short. They lack incident grounding, don't provide the scale modern training requires, and miss the operational security context developers need for production deployments. We present SecureCode v2.0, a production-grade dataset of 1,215 security-focused coding examples that passed structural validation and expert security review. Every example ties to actual documented security incidents with CVE references, provides vulnerable and secure implementations, demonstrates concrete attacks, and includes defense-in-depth operational guidance. The dataset covers 11 vulnerability categories (complete OWASP Top 10:2025 plus AI/ML Security Threats) across 11 languages (Python, JavaScript, Java, Go, PHP, C#, TypeScript, Ruby, Rust, Kotlin, and YAML for infrastructure-as-code). Our quality assurance framework ensures complete incident grounding. Each example includes SIEM integration strategies, infrastructure hardening recommendations (Docker, AppArmor, WAF configurations), and testing approaches using language-appropriate frameworks. The dataset uses a 4-turn conversational structure mirroring actual developer-AI interactions, escalating from basic implementations to advanced security considerations and defense-in-depth guidance. Our contributions: (1) 1,215 rigorously validated examples split into 989 training, 122 validation, and 104 test sets, (2) an automated validation framework ensuring dataset consistency, (3) a 4-turn conversational structure capturing realistic security workflows, (4) comprehensive operational security guidance with SIEM integration strategies, (5) complete language-specific implementation fidelity, and (6) open-source release of data, validation tools, and benchmarking protocols.

The availability of large-scale datasets, advanced architectures, and powerful computational resources have led to effective code models that automate diverse software engineering activities. The datasets usually consist of billions of lines of code from both open-source and private repositories. A code model memorizes and produces source code verbatim, which potentially contains vulnerabilities, sensitive information, or code with strict licenses, leading to potential security and privacy issues. This paper investigates an important problem: to what extent do code models memorize their training data? We conduct an empirical study to explore memorization in large pre-trained code models. Our study highlights that simply extracting 20,000 outputs (each having 512 tokens) from a code model can produce over 40,125 code snippets that are memorized from the training data. To provide a better understanding, we build a taxonomy of memorized contents with 3 categories and 14 subcategories. The results show that the prompts sent to the code models affect the distribution of memorized contents. We identify several key factors of memorization. Specifically, given the same architecture, larger models suffer more from memorization problems. A code model produces more memorization when it is allowed to generate longer outputs. We also find a strong positive correlation between the number of an output's occurrences in the training data and that in the generated outputs, which indicates that a potential way to reduce memorization is to remove duplicates in the training data. We then identify effective metrics that infer whether an output contains memorization accurately. We also make suggestions to deal with memorization.

Large Language Models (LLMs) are one of the most promising developments in the field of artificial intelligence, and the software engineering community has readily noticed their potential role in the software development life-cycle. Developers routinely ask LLMs to generate code snippets, increasing productivity but also potentially introducing ownership, privacy, correctness, and security issues. Previous work highlighted how code generated by mainstream commercial LLMs is often not safe, containing vulnerabilities, bugs, and code smells. In this paper, we present a framework that leverages testing and static analysis to assess the quality, and guide the self-improvement, of code generated by general-purpose, open-source LLMs. First, we ask LLMs to generate C code to solve a number of programming tasks. Then we employ ground-truth tests to assess the (in)correctness of the generated code, and a static analysis tool to detect potential safety vulnerabilities. Next, we assess the models ability to evaluate the generated code, by asking them to detect errors and vulnerabilities. Finally, we test the models ability to fix the generated code, providing the reports produced during the static analysis and incorrectness evaluation phases as feedback. Our results show that models often produce incorrect code, and that the generated code can include safety issues. Moreover, they perform very poorly at detecting either issue. On the positive side, we observe a substantial ability to fix flawed code when provided with information about failed tests or potential vulnerabilities, indicating a promising avenue for improving the safety of LLM-based code generation tools.

With the increasing usage of open-source software (OSS) components, vulnerabilities embedded within them are propagated to a huge number of underlying applications. In practice, the timely application of security patches in downstream software is challenging. The main reason is that such patches do not explicitly indicate their security impacts in the documentation, which would be difficult to recognize for software maintainers and users. However, attackers can still identify these "secret" security patches by analyzing the source code and generate corresponding exploits to compromise not only unpatched versions of the current software, but also other similar software packages that may contain the same vulnerability due to code cloning or similar design/implementation logic. Therefore, it is critical to identify these secret security patches to enable timely fixes. To this end, we propose a deep learning-based defense system called PatchRNN to automatically identify secret security patches in OSS. Besides considering descriptive keywords in the commit message (i.e., at the text level), we leverage both syntactic and semantic features at the source-code level. To evaluate the performance of our system, we apply it on a large-scale real-world patch dataset and conduct a case study on a popular open-source web server software - NGINX. Experimental results show that the PatchRNN can successfully detect secret security patches with a low false positive rate.

Code models, such as CodeBERT and CodeT5, offer general-purpose representations of code and play a vital role in supporting downstream automated software engineering tasks. Most recently, code models were revealed to be vulnerable to backdoor attacks. A code model that is backdoor-attacked can behave normally on clean examples but will produce pre-defined malicious outputs on examples injected with triggers that activate the backdoors. Existing backdoor attacks on code models use unstealthy and easy-to-detect triggers. This paper aims to investigate the vulnerability of code models with stealthy backdoor attacks. To this end, we propose AFRAIDOOR (Adversarial Feature as Adaptive Backdoor). AFRAIDOOR achieves stealthiness by leveraging adversarial perturbations to inject adaptive triggers into different inputs. We evaluate AFRAIDOOR on three widely adopted code models (CodeBERT, PLBART and CodeT5) and two downstream tasks (code summarization and method name prediction). We find that around 85% of adaptive triggers in AFRAIDOOR bypass the detection in the defense process. By contrast, only less than 12% of the triggers from previous work bypass the defense. When the defense method is not applied, both AFRAIDOOR and baselines have almost perfect attack success rates. However, once a defense is applied, the success rates of baselines decrease dramatically to 10.47% and 12.06%, while the success rate of AFRAIDOOR are 77.05% and 92.98% on the two tasks. Our finding exposes security weaknesses in code models under stealthy backdoor attacks and shows that the state-of-the-art defense method cannot provide sufficient protection. We call for more research efforts in understanding security threats to code models and developing more effective countermeasures.

A code generation model generates code by taking a prompt from a code comment, existing code, or a combination of both. Although code generation models (e.g. GitHub Copilot) are increasingly being adopted in practice, it is unclear whether they can successfully be used for unit test generation without fine-tuning. We investigated how well three generative models (Codex, GPT-3.5-Turbo, and StarCoder) can generate test cases to fill this gap. We used two benchmarks (HumanEval and Evosuite SF110) to investigate the context generation's effect in the unit test generation process. We evaluated the models based on compilation rates, test correctness, coverage, and test smells. We found that the Codex model achieved above 80% coverage for the HumanEval dataset, but no model had more than 2% coverage for the EvoSuite SF110 benchmark. The generated tests also suffered from test smells, such as Duplicated Asserts and Empty Tests.

Recent advancements in Large Language Models (LLMs) have significantly enhanced their code generation capabilities. However, their robustness against adversarial misuse, particularly through multi-turn malicious coding prompts, remains underexplored. In this work, we introduce code decomposition attacks, where a malicious coding task is broken down into a series of seemingly benign subtasks across multiple conversational turns to evade safety filters. To facilitate systematic evaluation, we introduce , a large-scale benchmark designed to evaluate the robustness of code LLMs against both single-turn and multi-turn malicious prompts. Empirical results across open- and closed-source models reveal persistent vulnerabilities, especially under multi-turn scenarios. Fine-tuning on MOCHA improves rejection rates while preserving coding ability, and importantly, enhances robustness on external adversarial datasets with up to 32.4% increase in rejection rates without any additional supervision.

Existing works have established multiple benchmarks to highlight the security risks associated with Code GenAI. These risks are primarily reflected in two areas: a model potential to generate insecure code (insecure coding) and its utility in cyberattacks (cyberattack helpfulness). While these benchmarks have made significant strides, there remain opportunities for further improvement. For instance, many current benchmarks tend to focus more on a model ability to provide attack suggestions rather than its capacity to generate executable attacks. Additionally, most benchmarks rely heavily on static evaluation metrics, which may not be as precise as dynamic metrics such as passing test cases. Conversely, expert-verified benchmarks, while offering high-quality data, often operate at a smaller scale. To address these gaps, we develop SecCodePLT, a unified and comprehensive evaluation platform for code GenAIs' risks. For insecure code, we introduce a new methodology for data creation that combines experts with automatic generation. Our methodology ensures the data quality while enabling large-scale generation. We also associate samples with test cases to conduct code-related dynamic evaluation. For cyberattack helpfulness, we set up a real environment and construct samples to prompt a model to generate actual attacks, along with dynamic metrics in our environment. We conduct extensive experiments and show that SecCodePLT outperforms the state-of-the-art (SOTA) benchmark CyberSecEval in security relevance. Furthermore, it better identifies the security risks of SOTA models in insecure coding and cyberattack helpfulness. Finally, we apply SecCodePLT to the SOTA code agent, Cursor, and, for the first time, identify non-trivial security risks in this advanced coding agent.

Large language models (LLMs) are increasingly used in software development, yet their tendency to generate insecure code remains a major barrier to real-world deployment. Existing secure code alignment methods often suffer from a functionality--security paradox, improving security at the cost of substantial utility degradation. We propose SecCoderX, an online reinforcement learning framework for functionality-preserving secure code generation. SecCoderX first bridges vulnerability detection and secure code generation by repurposing mature detection resources in two ways: (i) synthesizing diverse, reality-grounded vulnerability-inducing coding tasks for online RL rollouts, and (ii) training a reasoning-based vulnerability reward model that provides scalable and reliable security supervision. Together, these components are unified in an online RL loop to align code LLMs to generate secure and functional code. Extensive experiments demonstrate that SecCoderX achieves state-of-the-art performance, improving Effective Safety Rate (ESR) by approximately 10% over unaligned models, whereas prior methods often degrade ESR by 14-54%. We release our code, dataset and model checkpoints at https://github.com/AndrewWTY/SecCoderX.

Trusted Execution Environments (TEEs), such as Intel SGX and ARM TrustZone, provide isolated regions of CPU and memory for secure computation and are increasingly used to protect sensitive data and code across diverse application domains. However, little is known about how developers actually use TEEs in practice. This paper presents the first large-scale empirical study of real-world TEE applications. We collected and analyzed 241 open-source projects from GitHub that utilize the two most widely-adopted TEEs, Intel SGX and ARM TrustZone. By combining manual inspection with customized static analysis scripts, we examined their adoption contexts, usage patterns, and development practices across three phases. First, we categorized the projects into 8 application domains and identified trends in TEE adoption over time. We found that the dominant use case is IoT device security (30%), which contrasts sharply with prior academic focus on blockchain and cryptographic systems (7%), while AI model protection (12%) is rapidly emerging as a growing domain. Second, we analyzed how TEEs are integrated into software and observed that 32.4% of the projects reimplement cryptographic functionalities instead of using official SDK APIs, suggesting that current SDKs may have limited usability and portability to meet developers' practical needs. Third, we examined security practices through manual inspection and found that 25.3% (61 of 241) of the projects exhibit insecure coding behaviors when using TEEs, such as hardcoded secrets and missing input validation, which undermine their intended security guarantees. Our findings have important implications for improving the usability of TEE SDKs and supporting developers in trusted software development.

Large language models (LLMs) have brought significant advancements to code generation and code repair, benefiting both novice and experienced developers. However, their training using unsanitized data from open-source repositories, like GitHub, raises the risk of inadvertently propagating security vulnerabilities. Despite numerous studies investigating the safety of code LLMs, there remains a gap in comprehensively addressing their security features. In this work, we aim to present a comprehensive study aimed at precisely evaluating and enhancing the security aspects of code LLMs. To support our research, we introduce CodeSecEval, a meticulously curated dataset designed to address 44 critical vulnerability types with 180 distinct samples. CodeSecEval serves as the foundation for the automatic evaluation of code models in two crucial tasks: code generation and code repair, with a strong emphasis on security. Our experimental results reveal that current models frequently overlook security issues during both code generation and repair processes, resulting in the creation of vulnerable code. In response, we propose different strategies that leverage vulnerability-aware information and insecure code explanations to mitigate these security vulnerabilities. Furthermore, our findings highlight that certain vulnerability types particularly challenge model performance, influencing their effectiveness in real-world applications. Based on these findings, we believe our study will have a positive impact on the software engineering community, inspiring the development of improved methods for training and utilizing LLMs, thereby leading to safer and more trustworthy model deployment.

Software testing is a crucial aspect of software development, and the creation of high-quality tests that adhere to best practices is essential for effective maintenance. Recently, Large Language Models (LLMs) have gained popularity for code generation, including the automated creation of test cases. However, these LLMs are often trained on vast amounts of publicly available code, which may include test cases that do not adhere to best practices and may even contain test smells (anti-patterns). To address this issue, we propose a novel technique called Reinforcement Learning from Static Quality Metrics (RLSQM). To begin, we analyze the anti-patterns generated by the LLM and show that LLMs can generate undesirable test smells. Thus, we train specific reward models for each static quality metric, then utilize Proximal Policy Optimization (PPO) to train models for optimizing a single quality metric at a time. Furthermore, we amalgamate these rewards into a unified reward model aimed at capturing different best practices and quality aspects of tests. By comparing RL-trained models with those trained using supervised learning, we provide insights into how reliably utilize RL to improve test generation quality and into the effects of various training strategies. Our experimental results demonstrate that the RL-optimized model consistently generated high-quality test cases compared to the base LLM, improving the model by up to 21%, and successfully generates nearly 100% syntactically correct code. RLSQM also outperformed GPT-4 on four out of seven metrics. This represents a significant step towards enhancing the overall efficiency and reliability of software testing through Reinforcement Learning and static quality metrics. Our data are available at this link: https://figshare.com/s/ded476c8d4c221222849.

Software security vulnerabilities can lead to severe consequences, making early detection essential. Although code review serves as a critical defense mechanism against security flaws, relevant feedback remains scarce due to limited attention to security issues or a lack of expertise among reviewers. Existing datasets and studies primarily focus on general-purpose code review comments, either lacking security-specific annotations or being too limited in scale to support large-scale research. To bridge this gap, we introduce SeRe, a security-related code review dataset, constructed using an active learning-based ensemble classification approach. The proposed approach iteratively refines model predictions through human annotations, achieving high precision while maintaining reasonable recall. Using the fine-tuned ensemble classifier, we extracted 6,732 security-related reviews from 373,824 raw review instances, ensuring representativeness across multiple programming languages. Statistical analysis indicates that SeRe generally aligns with real-world security-related review distribution. To assess both the utility of SeRe and the effectiveness of existing code review comment generation approaches, we benchmark state-of-the-art approaches on security-related feedback generation. By releasing SeRe along with our benchmark results, we aim to advance research in automated security-focused code review and contribute to the development of more effective secure software engineering practices.

Code generation with large language models (LLMs), often termed vibe coding, is increasingly adopted in production but fails to ensure code quality, particularly in security (e.g., SQL injection vulnerabilities) and maintainability (e.g., missing type annotations). Existing methods, such as supervised fine-tuning and rule-based post-processing, rely on labor-intensive annotations or brittle heuristics, limiting their scalability and effectiveness. We propose REAL, a reinforcement learning framework that incentivizes LLMs to generate production-quality code using program analysis-guided feedback. Specifically, REAL integrates two automated signals: (1) program analysis detecting security or maintainability defects and (2) unit tests ensuring functional correctness. Unlike prior work, our framework is prompt-agnostic and reference-free, enabling scalable supervision without manual intervention. Experiments across multiple datasets and model scales demonstrate that REAL outperforms state-of-the-art methods in simultaneous assessments of functionality and code quality. Our work bridges the gap between rapid prototyping and production-ready code, enabling LLMs to deliver both speed and quality.

AI coding assistants are widely used for tasks like code generation. These tools now require large and complex contexts, automatically sourced from various originsx2014across files, projects, and contributorsx2014forming part of the prompt fed to underlying LLMs. This automatic context-gathering introduces new vulnerabilities, allowing attackers to subtly poison input to compromise the assistant's outputs, potentially generating vulnerable code or introducing critical errors. We propose a novel attack, Cross-Origin Context Poisoning (XOXO), that is challenging to detect as it relies on adversarial code modifications that are semantically equivalent. Traditional program analysis techniques struggle to identify these perturbations since the semantics of the code remains correct, making it appear legitimate. This allows attackers to manipulate coding assistants into producing incorrect outputs, while shifting the blame to the victim developer. We introduce a novel, task-agnostic, black-box attack algorithm GCGS that systematically searches the transformation space using a Cayley Graph, achieving a 75.72% attack success rate on average across five tasks and eleven models, including GPT 4.1 and Claude 3.5 Sonnet v2 used by popular AI coding assistants. Furthermore, defenses like adversarial fine-tuning are ineffective against our attack, underscoring the need for new security measures in LLM-powered coding tools.

Much is promised in relation to AI-supported software development. However, there has been limited evaluation effort in the research domain aimed at validating the true utility of such techniques, especially when compared to human coding outputs. We bridge this gap, where a benchmark dataset comprising 72 distinct software engineering tasks is used to compare the effectiveness of large language models (LLMs) and human programmers in producing Python software code. GPT-4 is used as a representative LLM, where for the code generated by humans and this LLM, we evaluate code quality and adherence to Python coding standards, code security and vulnerabilities, code complexity and functional correctness. We use various static analysis benchmarks, including Pylint, Radon, Bandit and test cases. Among the notable outcomes, results show that human-generated code recorded higher ratings for adhering to coding standards than GPT-4. We observe security flaws in code generated by both humans and GPT-4, however, code generated by humans shows a greater variety of problems, but GPT-4 code included more severe outliers. Our results show that although GPT-4 is capable of producing coding solutions, it frequently produces more complex code that may need more reworking to ensure maintainability. On the contrary however, our outcomes show that a higher number of test cases passed for code generated by GPT-4 across a range of tasks than code that was generated by humans. That said, GPT-4 frequently struggles with complex problem-solving that involve in-depth domain knowledge. This study highlights the potential utility of LLMs for supporting software development, however, tasks requiring comprehensive, innovative or unconventional solutions, and careful debugging and error correction seem to be better developed by human programmers. We plot an agenda for the software engineering community.

With the rapidly increasing capabilities and adoption of code agents for AI-assisted coding, safety concerns, such as generating or executing risky code, have become significant barriers to the real-world deployment of these agents. To provide comprehensive and practical evaluations on the safety of code agents, we propose RedCode, a benchmark for risky code execution and generation: (1) RedCode-Exec provides challenging prompts that could lead to risky code execution, aiming to evaluate code agents' ability to recognize and handle unsafe code. We provide a total of 4,050 risky test cases in Python and Bash tasks with diverse input formats including code snippets and natural text. They covers 25 types of critical vulnerabilities spanning 8 domains (e.g., websites, file systems). We provide Docker environments and design corresponding evaluation metrics to assess their execution results. (2) RedCode-Gen provides 160 prompts with function signatures and docstrings as input to assess whether code agents will follow instructions to generate harmful code or software. Our empirical findings, derived from evaluating three agent frameworks based on 19 LLMs, provide insights into code agents' vulnerabilities. For instance, evaluations on RedCode-Exec show that agents are more likely to reject executing risky operations on the operating system, but are less likely to reject executing technically buggy code, indicating high risks. Risky operations described in natural text lead to a lower rejection rate than those in code format. Additionally, evaluations on RedCode-Gen show that more capable base models and agents with stronger overall coding abilities, such as GPT4, tend to produce more sophisticated and effective harmful software. Our findings highlight the need for stringent safety evaluations for diverse code agents. Our dataset and code are available at https://github.com/AI-secure/RedCode.

While recent code-specific large language models (LLMs) have greatly enhanced their code generation capabilities, the safety of these models remains under-explored, posing potential risks as insecure code generated by these models may introduce vulnerabilities into real-world systems. Existing methods collect security-focused datasets from real-world vulnerabilities for instruction tuning in order to mitigate such issues. However, they are largely constrained by the data sparsity of vulnerable code, and have limited applicability in the multi-stage post-training workflows of modern LLMs. In this paper, we propose ProSec, a novel proactive security alignment approach designed to align code LLMs with secure coding practices. ProSec systematically exposes the vulnerabilities in a code LLM by synthesizing vulnerability-inducing coding scenarios from Common Weakness Enumerations (CWEs) and generates fixes to vulnerable code snippets, allowing the model to learn secure practices through preference learning objectives. The scenarios synthesized by ProSec trigger 25x more vulnerable code than a normal instruction-tuning dataset, resulting in a security-focused alignment dataset 7x larger than the previous work. Experiments show that models trained with ProSec are 25.2% to 35.4% more secure compared to previous work without degrading models' utility.

Vulnerabilities in open-source software can cause cascading effects in the modern digital ecosystem. It is especially worrying if these vulnerabilities repeat across many projects, as once the adversaries find one of them, they can scale up the attack very easily. Unfortunately, since developers frequently reuse code from their own or external code resources, some nearly identical vulnerabilities exist across many open-source projects. We conducted a study to examine the prevalence of a particular vulnerable code pattern that enables path traversal attacks (CWE-22) across open-source GitHub projects. To handle this study at the GitHub scale, we developed an automated pipeline that scans GitHub for the targeted vulnerable pattern, confirms the vulnerability by first running a static analysis and then exploiting the vulnerability in the context of the studied project, assesses its impact by calculating the CVSS score, generates a patch using GPT-4, and reports the vulnerability to the maintainers. Using our pipeline, we identified 1,756 vulnerable open-source projects, some of which are very influential. For many of the affected projects, the vulnerability is critical (CVSS score higher than 9.0), as it can be exploited remotely without any privileges and critically impact the confidentiality and availability of the system. We have responsibly disclosed the vulnerability to the maintainers, and 14\% of the reported vulnerabilities have been remediated. We also investigated the root causes of the vulnerable code pattern and assessed the side effects of the large number of copies of this vulnerable pattern that seem to have poisoned several popular LLMs. Our study highlights the urgent need to help secure the open-source ecosystem by leveraging scalable automated vulnerability management solutions and raising awareness among developers.

The widespread lack of broad source code verification on blockchain explorers such as Etherscan, where despite 78,047,845 smart contracts deployed on Ethereum (as of May 26, 2025), a mere 767,520 (< 1%) are open source, presents a severe impediment to blockchain security. This opacity necessitates the automated semantic analysis of on-chain smart contract bytecode, a fundamental research challenge with direct implications for identifying vulnerabilities and understanding malicious behavior. Prevailing decompilers struggle to reverse bytecode in a readable manner, often yielding convoluted code that critically hampers vulnerability analysis and thwarts efforts to dissect contract functionalities for security auditing. This paper addresses this challenge by introducing a pioneering decompilation pipeline that, for the first time, successfully leverages Large Language Models (LLMs) to transform Ethereum Virtual Machine (EVM) bytecode into human-readable and semantically faithful Solidity code. Our novel methodology first employs rigorous static program analysis to convert bytecode into a structured three-address code (TAC) representation. This intermediate representation then guides a Llama-3.2-3B model, specifically fine-tuned on a comprehensive dataset of 238,446 TAC-to-Solidity function pairs, to generate high-quality Solidity. This approach uniquely recovers meaningful variable names, intricate control flow, and precise function signatures. Our extensive empirical evaluation demonstrates a significant leap beyond traditional decompilers, achieving an average semantic similarity of 0.82 with original source and markedly superior readability. The practical viability and effectiveness of our research are demonstrated through its implementation in a publicly accessible system, available at https://evmdecompiler.com.

Modern code completion engines, powered by large language models (LLMs), assist millions of developers with their strong capabilities to generate functionally correct code. Due to this popularity, it is crucial to investigate the security implications of relying on LLM-based code completion. In this work, we demonstrate that state-of-the-art black-box LLM-based code completion engines can be stealthily biased by adversaries to significantly increase their rate of insecure code generation. We present the first attack, named INSEC, that achieves this goal. INSEC works by injecting an attack string as a short comment in the completion input. The attack string is crafted through a query-based optimization procedure starting from a set of carefully designed initialization schemes. We demonstrate INSEC's broad applicability and effectiveness by evaluating it on various state-of-the-art open-source models and black-box commercial services (e.g., OpenAI API and GitHub Copilot). On a diverse set of security-critical test cases, covering 16 CWEs across 5 programming languages, INSEC increases the rate of generated insecure code by more than 50%, while maintaining the functional correctness of generated code. We consider INSEC practical -- it requires low resources and costs less than 10 US dollars to develop on commodity hardware. Moreover, we showcase the attack's real-world deployability, by developing an IDE plug-in that stealthily injects INSEC into the GitHub Copilot extension.

Rapid evolution of Large Language Models (LLMs) has achieved major advances in reasoning, planning, and function-calling capabilities. Multi-agentic collaborative frameworks using such LLMs place them at the center of solving software development-related tasks such as code generation. However, direct use of LLM generated code in production software development systems is problematic. The code could be unstable or erroneous and contain vulnerabilities such as data poisoning, malicious attacks, and hallucinations that could lead to widespread system malfunctions. This prohibits the adoption of LLM generated code in production AI systems where human code reviews and traditional secure testing tools are impractical or untrustworthy. In this paper, we discuss safety and reliability problems with the execution of LLM generated code and propose a Secure Transpiler and Executor of LLM-Generated Program (STELP), capable of executing LLM-generated code in a controlled and safe manner. STELP secures autonomous production AI systems involving code generation, filling the critical void left by the impracticality or limitations of traditional secure testing methodologies and human oversight. This includes applications such as headless code generation-execution and LLMs that produce executable code snippets as an action plan to be executed in real time. We contribute a human-validated dataset of insecure code snippets and benchmark our approach on publicly available datasets for correctness, safety, and latency. Our results demonstrate that our approach outperforms an existing method by a significant margin, particularly in its ability to safely execute risky code snippets. Warning: This paper contains malicious code snippets that should be run with caution.

Package confusion attacks such as typosquatting threaten software supply chains. Attackers make packages with names that syntactically or semantically resemble legitimate ones, tricking engineers into installing malware. While prior work has developed defenses against package confusions in some software package registries, notably NPM, PyPI, and RubyGems, gaps remain: high false-positive rates; generalization to more software package ecosystems; and insights from real-world deployment. In this work, we introduce ConfuGuard, a solution designed to address the challenges posed by package confusion threats. We begin by presenting the first empirical analysis of benign signals derived from prior package confusion data, uncovering their threat patterns, engineering practices, and measurable attributes. We observed that 13.3% of real package confusion attacks are initially stealthy, so we take that into consideration and refined the definitions. Building on state-of-the-art approaches, we extend support from three to six software package registries, and leverage package metadata to distinguish benign packages. Our approach significantly reduces 64% false-positive (from 77% to 13%), with acceptable additional overhead to filter out benign packages by analyzing the package metadata. ConfuGuard is in production at our industry partner, whose analysts have already confirmed 301 packages detected by ConfuGuard as real attacks. We share lessons learned from production and provide insights to researchers.

Background: Leaking sensitive information, such as API keys, tokens, and credentials, in source code remains a persistent security threat. Traditional regex and entropy-based tools often generate high false positives due to limited contextual understanding. Aims: This work aims to enhance secret detection in source code using large language models (LLMs), reducing false positives while maintaining high recall. We also evaluate the feasibility of using fine-tuned, smaller models for local deployment. Method: We propose a hybrid approach combining regex-based candidate extraction with LLM-based classification. We evaluate pre-trained and fine-tuned variants of various Large Language Models on a benchmark dataset from 818 GitHub repositories. Various prompting strategies and efficient fine-tuning methods are employed for both binary and multiclass classification. Results: The fine-tuned LLaMA-3.1 8B model achieved an F1-score of 0.9852 in binary classification, outperforming regex-only baselines. For multiclass classification, Mistral-7B reached 0.982 accuracy. Fine-tuning significantly improved performance across all models. Conclusions: Fine-tuned LLMs offer an effective and scalable solution for secret detection, greatly reducing false positives. Open-source models provide a practical alternative to commercial APIs, enabling secure and cost-efficient deployment in development workflows.

The increasing adoption of large language models (LLMs) in software engineering necessitates rigorous security evaluation of their generated code. However, existing benchmarks often lack relevance to real-world AI programming scenarios, making them inadequate for assessing the practical security risks associated with AI-generated code in production environments. To address this gap, we introduce A.S.E (AI Code Generation Security Evaluation), a repository-level evaluation benchmark designed to closely mirror real-world AI programming tasks, offering a comprehensive and reliable framework for assessing the security of AI-generated code. Our evaluation of leading LLMs on A.S.E reveals several key findings. In particular, current LLMs still struggle with secure coding. The complexity in repository-level scenarios presents challenges for LLMs that typically perform well on snippet-level tasks. Morever, a larger reasoning budget does not necessarily lead to better code generation. These observations offer valuable insights into the current state of AI code generation, assisting developers in selecting the most appropriate models for practical tasks, while laying the foundation for refining LLMs to generate secure and efficient code in real-world applications.

Large Language Models (LLMs) have become critical to modern software development, but their reliance on uncurated web-scale datasets for training introduces a significant security risk: the absorption and reproduction of malicious content. To systematically evaluate this risk, we introduce Scam2Prompt, a scalable automated auditing framework that identifies the underlying intent of a scam site and then synthesizes innocuous, developer-style prompts that mirror this intent, allowing us to test whether an LLM will generate malicious code in response to these innocuous prompts. In a large-scale study of four production LLMs (GPT-4o, GPT-4o-mini, Llama-4-Scout, and DeepSeek-V3), we found that Scam2Prompt's innocuous prompts triggered malicious URL generation in 4.24% of cases. To test the persistence of this security risk, we constructed Innoc2Scam-bench, a benchmark of 1,559 innocuous prompts that consistently elicited malicious code from all four initial LLMs. When applied to seven additional production LLMs released in 2025, we found the vulnerability is not only present but severe, with malicious code generation rates ranging from 12.7% to 43.8%. Furthermore, existing safety measures like state-of-the-art guardrails proved insufficient to prevent this behavior, with an overall detection rate of less than 0.3%.

The research builds and evaluates the adversarial potential to introduce copied code or hallucinated AI recommendations for malicious code in popular code repositories. While foundational large language models (LLMs) from OpenAI, Google, and Anthropic guard against both harmful behaviors and toxic strings, previous work on math solutions that embed harmful prompts demonstrate that the guardrails may differ between expert contexts. These loopholes would appear in mixture of expert's models when the context of the question changes and may offer fewer malicious training examples to filter toxic comments or recommended offensive actions. The present work demonstrates that foundational models may refuse to propose destructive actions correctly when prompted overtly but may unfortunately drop their guard when presented with a sudden change of context, like solving a computer programming challenge. We show empirical examples with trojan-hosting repositories like GitHub, NPM, NuGet, and popular content delivery networks (CDN) like jsDelivr which amplify the attack surface. In the LLM's directives to be helpful, example recommendations propose application programming interface (API) endpoints which a determined domain-squatter could acquire and setup attack mobile infrastructure that triggers from the naively copied code. We compare this attack to previous work on context-shifting and contrast the attack surface as a novel version of "living off the land" attacks in the malware literature. In the latter case, foundational language models can hijack otherwise innocent user prompts to recommend actions that violate their owners' safety policies when posed directly without the accompanying coding support request.

Agentic AI coding editors driven by large language models have recently become more popular due to their ability to improve developer productivity during software development. Modern editors such as Cursor are designed not just for code completion, but also with more system privileges for complex coding tasks (e.g., run commands in the terminal, access development environments, and interact with external systems). While this brings us closer to the "fully automated programming" dream, it also raises new security concerns. In this study, we present the first empirical analysis of prompt injection attacks targeting these high-privilege agentic AI coding editors. We show how attackers can remotely exploit these systems by poisoning external development resources with malicious instructions, effectively hijacking AI agents to run malicious commands, turning "your AI" into "attacker's shell". To perform this analysis, we implement AIShellJack, an automated testing framework for assessing prompt injection vulnerabilities in agentic AI coding editors. AIShellJack contains 314 unique attack payloads that cover 70 techniques from the MITRE ATT&CK framework. Using AIShellJack, we conduct a large-scale evaluation on GitHub Copilot and Cursor, and our evaluation results show that attack success rates can reach as high as 84% for executing malicious commands. Moreover, these attacks are proven effective across a wide range of objectives, ranging from initial access and system discovery to credential theft and data exfiltration.

Large language models (LLMs) have brought significant advancements to code generation, benefiting both novice and experienced developers. However, their training using unsanitized data from open-source repositories, like GitHub, introduces the risk of inadvertently propagating security vulnerabilities. To effectively mitigate this concern, this paper presents a comprehensive study focused on evaluating and enhancing code LLMs from a software security perspective. We introduce SecuCoGenSecuCoGen has been uploaded as supplemental material and will be made publicly available after publication., a meticulously curated dataset targeting 21 critical vulnerability types. SecuCoGen comprises 180 samples and serves as the foundation for conducting experiments on three crucial code-related tasks: code generation, code repair and vulnerability classification, with a strong emphasis on security. Our experimental results reveal that existing models often overlook security concerns during code generation, leading to the generation of vulnerable code. To address this, we propose effective approaches to mitigate the security vulnerabilities and enhance the overall robustness of code generated by LLMs. Moreover, our study identifies weaknesses in existing models' ability to repair vulnerable code, even when provided with vulnerability information. Additionally, certain vulnerability types pose challenges for the models, hindering their performance in vulnerability classification. Based on these findings, we believe our study will have a positive impact on the software engineering community, inspiring the development of improved methods for training and utilizing LLMs, thereby leading to safer and more trustworthy model deployment.

Automatically generating source code from natural language using large language models (LLMs) is becoming common, yet security vulnerabilities persist despite advances in fine tuning and prompting. In this work, we systematically evaluate whether multi LLM ensembles and collaborative strategies can meaningfully improve secure code generation. We present MULTI-LLMSECCODEEVAL, a framework for assessing and enhancing security across the vulnerability management lifecycle by combining multiple LLMs with static analysis and structured collaboration. Using SecLLMEval and SecLLMHolmes, we benchmark ten pipelines spanning single model, ensemble, collaborative, and hybrid designs. Our results show that ensemble pipelines augmented with static analysis improve secure code generation over single LLM baselines by up to 47.3% on SecLLMEval and 19.3% on SecLLMHolmes, while purely LLM based collaborative pipelines yield smaller gains of 8.9% to 22.3%. Hybrid pipelines that integrate ensembling, detection, and patching achieve the strongest security performance, outperforming the best ensemble baseline by 1.78% to 4.72% and collaborative baselines by 19.81% to 26.78%. Ablation studies reveal that model scale alone does not ensure security. Smaller, structured multi model ensembles consistently outperform large monolithic LLMs. Overall, our findings demonstrate that secure code does not emerge from scale, but from carefully orchestrated multi model system design.

Large Language Models (LLMs) have significantly aided developers by generating or assisting in code writing, enhancing productivity across various tasks. While identifying incorrect code is often straightforward, detecting vulnerabilities in functionally correct code is more challenging, especially for developers with limited security knowledge, which poses considerable security risks of using LLM-generated code and underscores the need for robust evaluation benchmarks that assess both functional correctness and security. Current benchmarks like CyberSecEval and SecurityEval attempt to solve it but are hindered by unclear and impractical specifications, failing to assess both functionality and security accurately. To tackle these deficiencies, we introduce CWEval, a novel outcome-driven evaluation framework designed to enhance the evaluation of secure code generation by LLMs. This framework not only assesses code functionality but also its security simultaneously with high-quality task specifications and outcome-driven test oracles which provides high accuracy. Coupled with CWEval-bench, a multilingual, security-critical coding benchmark, CWEval provides a rigorous empirical security evaluation on LLM-generated code, overcoming previous benchmarks' shortcomings. Through our evaluations, CWEval reveals a notable portion of functional but insecure code produced by LLMs, and shows a serious inaccuracy of previous evaluations, ultimately contributing significantly to the field of secure code generation. We open-source our artifact at: https://github.com/Co1lin/CWEval .

Software supply chain attacks targeting the npm ecosystem have become increasingly sophisticated, leveraging obfuscation and complex logic to evade traditional detection mechanisms. Recently, large language models (LLMs) have attracted significant attention for malicious code detection due to their strong capabilities in semantic code understanding. However, the practical deployment of LLMs in this domain is severely constrained by limited context windows and high computational costs. Naive approaches, such as token-based code splitting, often fragment semantic context, leading to degraded detection performance. To overcome these challenges, this paper introduces a novel LLM-based framework for malicious npm package detection that leverages code slicing techniques. A specialized taint-based slicing method tailored to the JavaScript ecosystem is proposed to recover malicious data flows. By isolating security-relevant logic from benign boilerplate code, the approach reduces the input code volume by over 99\% while preserving critical malicious behaviors. The framework is evaluated on a curated dataset comprising over 7000 malicious and benign npm packages. Experimental results using the DeepSeek-Coder-6.7B model demonstrate that the proposed approach achieves a detection accuracy of 87.04\%, significantly outperforming a full-package baseline based on naive token splitting (75.41\%). These results indicate that semantically optimized input representations via code slicing not only mitigate the LLM context window bottleneck but also enhance reasoning precision for security analysis, providing an effective defense against evolving open-source software supply chain threats.

Large Language Models (LLMs) have shown promising potentials in program generation and no-code automation. However, LLMs are prone to generate hallucinations, i.e., they generate text which sounds plausible but is incorrect. Although there has been a recent surge in research on LLM hallucinations for text generation, similar hallucination phenomenon can happen in code generation. Sometimes the generated code can have syntactical or logical errors as well as more advanced issues like security vulnerabilities, memory leaks, etc. Given the wide adaptation of LLMs to enhance efficiency in code generation and development in general, it becomes imperative to investigate hallucinations in code generation. To the best of our knowledge, this is the first attempt at studying hallucinations in the code generated by LLMs. We start by introducing the code hallucination definition and a comprehensive taxonomy of code hallucination types. We propose the first benchmark CodeMirage dataset for code hallucinations. The benchmark contains 1,137 GPT-3.5 generated hallucinated code snippets for Python programming problems from two base datasets - HumanEval and MBPP. We then propose the methodology for code hallucination detection and experiment with open source LLMs such as CodeLLaMA as well as OpenAI's GPT-3.5 and GPT-4 models using one-shot prompt. We find that GPT-4 performs the best on HumanEval dataset and gives comparable results to the fine-tuned CodeBERT baseline on MBPP dataset. Towards the end, we discuss various mitigation strategies for code hallucinations and conclude our work.

LLM generated code often contains security issues. We address two key challenges in improving secure code generation. First, obtaining high quality training data covering a broad set of security issues is critical. To address this, we introduce a method for distilling a preference dataset of insecure and secure code pairs from frontier LLMs, along with a security reasoning that explains the issues and the fix. The key idea here is to make use of security knowledge sources to devise a systematic prompting strategy that ensures broad coverage. Second, aligning models to secure code requires focusing on localized regions of code. Direct preference optimization methods, like SimPO, are not designed to handle these localized differences and turn out to be ineffective. We address this with a new localized preference optimization algorithm that masks the security related tokens in both the winning (secure) and losing (insecure) responses. To prevent loss in code quality, we also add a regularizer. Evaluations show that both training on our dataset, DiSCo, and the new preference optimization algorithm, LPO, yield substantial reductions in code insecurity while also improving overall code quality. Code and dataset are available at https://github.com/StonyBrookNLP/disco-lpo.

Large language models (LLMs) are increasingly used for code generation in fast, informal development workflows, often referred to as vibe coding, where speed and convenience are prioritized, and security requirements are rarely made explicit. In this setting, models frequently produce functionally correct but insecure code, creating a growing security risk. Existing approaches to improving code security rely on full-parameter fine-tuning or parameter-efficient adaptations, which are either costly and prone to catastrophic forgetting or operate at coarse granularity with limited interpretability and control. We present GoodVibe, a neuron-level framework for improving the security of code language models by default. GoodVibe is based on the key insight that security-relevant reasoning is localized to a small subset of neurons. We identify these neurons using gradient-based attribution from a supervised security task and perform neuron-selective fine-tuning that updates only this security-critical subspace. To further reduce training cost, we introduce activation-driven neuron clustering, enabling structured updates with minimal overhead. We evaluate GoodVibe on six LLMs across security-critical programming languages, including C++, Java, Swift, and Go. GoodVibe substantially improves the security of generated code while preserving general model utility, achieving up to a 2.5x improvement over base models, matching or exceeding full fine-tuning with over 4,700x fewer trainable parameters, and reducing training computation by more than 3.6x compared to the parameter-efficient baseline (LoRA). Our results demonstrate that neuron-level optimization offers an effective and scalable approach to securing code generation without sacrificing efficiency or generality.

Autonomous coding agents are increasingly deployed as AI teammates in modern software engineering, independently authoring pull requests (PRs) that modify production code at scale. This study aims to systematically characterize how autonomous coding agents contribute to software security in practice, how these security-related contributions are reviewed and accepted, and which observable signals are associated with PR rejection. We conduct a large-scale empirical analysis of agent-authored PRs using the AIDev dataset, comprising of over 33,000 curated PRs from popular GitHub repositories. Security-relevant PRs are identified using a keyword filtering strategy, followed by manual validation, resulting in 1,293 confirmed security-related agentic-PRs. We then analyze prevalence, acceptance outcomes, and review latency across autonomous agents, programming ecosystems, and types of code changes. Moreover, we apply qualitative open coding to identify recurring security-related actions and underlying intents, and examine review metadata to identify early signals associated with PR rejection. Security-related Agentic-PRs constitute a meaningful share of agent activity (approximately 4\%). Rather than focusing solely on narrow vulnerability fixes, agents most frequently perform supportive security hardening activities, including testing, documentation, configuration, and improved error handling. Compared to non-security PRs, security-related Agentic-PRs exhibit lower merge rates and longer review latency, reflecting heightened human scrutiny, with variation across agents and programming ecosystems. PR rejection is more strongly associated with PR complexity and verbosity than with explicit security topics.

In this paper we consider contamination by code generation test sets, in particular in their use in modern large language models. We discuss three possible sources of such contamination and show findings supporting each of them: (i) direct data leakage, (ii) indirect data leakage through the use of synthetic data and (iii) overfitting to evaluation sets during model selection. Key to our findings is a new dataset of 161 prompts with their associated python solutions, dataset which is released at https://huggingface.co/datasets/CohereForAI/lbpp .

Trusted Execution Environments (TEEs) provide hardware-based isolation to protect sensitive data and computations from potentially compromised operating systems (OS). However, TEE applications inevitably interact with the untrusted OS through SDK interfaces, and improper partitioning can introduce severe vulnerabilities such as data leakage and code injection. While prior work has proposed static analysis tools to detect such issues, automated repair remains largely unexplored. This problem is particularly challenging due to three TEE-specific factors: the lack of standardized secure development guidelines, the difficulty of extracting semantic information from low-level C code, and the absence of mature testing and validation methods. In this work, we present TEERepair, a framework for automatically repairing bad partitioning issues in TEE applications. Our approach tackles the above challenges by introducing a domain-specific language (DSL) to encode repair rules that express and capture common TEE security patterns, which are instantiated as patch templates with placeholders for context-specific variables. We then leverage large language models (LLMs) to reason about code semantics and synthesize context-aware patches, and further generate test clients to validate the repairs. We evaluate TEERepair on the TEE Partitioning Errors Benchmark (PartitioningE-Bench), achieving a significantly higher repair success rate of 87.6% compared to baselines. Furthermore, applying TEERepair to real-world TEE projects, we submitted 5 repair pull requests, 2 of which have been confirmed and merged by project maintainers.

AI coding agents powered by LLMs are increasingly integrated into real-world software development, where they generate, edit, and execute code with autonomous access to local files and tools. Coding agents inherit security risks from both the LLM backbone, where adversarial prompts, poisoned training data, and backdoor triggers can cause models to emit insecure or attacker-chosen code, and their agentic architecture, where tool-using autonomy enables induced misuse of external APIs, data exfiltration, and persistent compromise of development environments. This paper presents a systematic evaluation of malicious issue requests against state-of-the-art coding agents (Cursor, Claude Code, and Codex Desktop), powered by two major model families (OpenAI GPT-5.3 Codex/GPT-5.4 and Anthropic Sonnet 4.6). Our novel benchmark IssueTrojanBench contains malicious issues that are constructed based on four novel attack categories (i.e., embedded as malicious instructions in issues), six delivery vectors (e.g., PDF, or issue comment), and further augmented by perturbations. Our results reveal critical vulnerabilities in the as-deployed modern coding agents, i.e., 66.5% of the malicious issues from IssueTrojanBench penetrate all the guardrails (agent- and LLM-level) of coding agents. Our further analysis shows that rejection is almost entirely from LLMs rather than the agent frameworks, with GPT models broadly vulnerable and Sonnet 4.6 exhibiting more selective, risk-aware blocking of high-impact actions. Our evaluation also highlights that the current agent-level defense strategy offers limited additional protection for coding agents. Our findings highlight the urgent need for stronger agent- and model-level safety mechanisms to protect AI coding agents.

With the recent advancement of Large Language Models (LLMs), generating functionally correct code has become less complicated for a wide array of developers. While using LLMs has sped up the functional development process, it poses a heavy risk to code security. Code generation with proper security measures using LLM is a significantly more challenging task than functional code generation. Security measures may include adding a pair of lines of code with the original code, consisting of null pointer checking or prepared statements for SQL injection prevention. Currently, available code repair LLMs generate code repair by supervised fine-tuning, where the model looks at cross-entropy loss. However, the original and repaired codes are mostly similar in functionality and syntactically, except for a few (1-2) lines, which act as security measures. This imbalance between the lines needed for security measures and the functional code enforces the supervised fine-tuned model to prioritize generating functional code without adding proper security measures, which also benefits the model by resulting in minimal loss. Therefore, in this work, for security hardening and strengthening of generated code from LLMs, we propose a reinforcement learning-based method for program-specific repair with the combination of semantic and syntactic reward mechanisms that focus heavily on adding security and functional measures in the code, respectively.

Large language models (LLMs) have achieved remarkable progress in code understanding tasks. However, they demonstrate limited performance in vulnerability detection and struggle to distinguish vulnerable code from patched code. We argue that LLMs lack understanding of security specifications -- the expectations about how code should behave to remain safe. When code behavior differs from these expectations, it becomes a potential vulnerability. However, such knowledge is rarely explicit in training data, leaving models unable to reason about security flaws. We propose VulInstruct, a specification-guided approach that systematically extracts security specifications from historical vulnerabilities to detect new ones. VulInstruct constructs a specification knowledge base from two perspectives: (i) General specifications from high-quality patches across projects, capturing fundamental safe behaviors; and (ii) Domain-specific specifications from repeated violations in particular repositories relevant to the target code. VulInstruct retrieves relevant past cases and specifications, enabling LLMs to reason about expected safe behaviors rather than relying on surface patterns. We evaluate VulInstruct under strict criteria requiring both correct predictions and valid reasoning. On PrimeVul, VulInstruct achieves 45.0% F1-score (32.7% improvement) and 37.7% recall (50.8% improvement) compared to baselines, while uniquely detecting 24.3% of vulnerabilities -- 2.4x more than any baseline. In pair-wise evaluation, VulInstruct achieves 32.3% relative improvement. VulInstruct also discovered a previously unknown high-severity vulnerability (CVE-2025-56538) in production code, demonstrating practical value for real-world vulnerability discovery. All code and supplementary materials are available at https://github.com/zhuhaopku/VulInstruct-temp.

Code contains security and functional bugs. The process of identifying and localizing them is difficult and relies on human labor. In this work, we present a novel approach (FLAG) to assist human debuggers. FLAG is based on the lexical capabilities of generative AI, specifically, Large Language Models (LLMs). Here, we input a code file then extract and regenerate each line within that file for self-comparison. By comparing the original code with an LLM-generated alternative, we can flag notable differences as anomalies for further inspection, with features such as distance from comments and LLM confidence also aiding this classification. This reduces the inspection search space for the designer. Unlike other automated approaches in this area, FLAG is language-agnostic, can work on incomplete (and even non-compiling) code and requires no creation of security properties, functional tests or definition of rules. In this work, we explore the features that help LLMs in this classification and evaluate the performance of FLAG on known bugs. We use 121 benchmarks across C, Python and Verilog; with each benchmark containing a known security or functional weakness. We conduct the experiments using two state of the art LLMs in OpenAI's code-davinci-002 and gpt-3.5-turbo, but our approach may be used by other models. FLAG can identify 101 of the defects and helps reduce the search space to 12-17% of source code.

Static analysis tools provide a powerful means to detect security vulnerabilities by specifying queries that encode vulnerable code patterns. However, writing such queries is challenging and requires diverse expertise in security and program analysis. To address this challenge, we present QLCoder - an agentic framework that automatically synthesizes queries in CodeQL, a powerful static analysis engine, directly from a given CVE metadata. QLCode embeds an LLM in a synthesis loop with execution feedback, while constraining its reasoning using a custom MCP interface that allows structured interaction with a Language Server Protocol (for syntax guidance) and a RAG database (for semantic retrieval of queries and documentation). This approach allows QLCoder to generate syntactically and semantically valid security queries. We evaluate QLCode on 176 existing CVEs across 111 Java projects. Building upon the Claude Code agent framework, QLCoder synthesizes correct queries that detect the CVE in the vulnerable but not in the patched versions for 53.4% of CVEs. In comparison, using only Claude Code synthesizes 10% correct queries.

The proliferation of agentic AI coding assistants, including Claude Code, GitHub Copilot, Cursor, and emerging skill-based architectures, has fundamentally transformed software development workflows. These systems leverage Large Language Models (LLMs) integrated with external tools, file systems, and shell access through protocols like the Model Context Protocol (MCP). However, this expanded capability surface introduces critical security vulnerabilities. In this Systematization of Knowledge (SoK) paper, we present a comprehensive analysis of prompt injection attacks targeting agentic coding assistants. We propose a novel three-dimensional taxonomy categorizing attacks across delivery vectors, attack modalities, and propagation behaviors. Our meta-analysis synthesizes findings from 78 recent studies (2021--2026), consolidating evidence that attack success rates against state-of-the-art defenses exceed 85\% when adaptive attack strategies are employed. We systematically catalog 42 distinct attack techniques spanning input manipulation, tool poisoning, protocol exploitation, multimodal injection, and cross-origin context poisoning. Through critical analysis of 18 defense mechanisms reported in prior work, we identify that most achieve less than 50\% mitigation against sophisticated adaptive attacks. We contribute: (1) a unified taxonomy bridging disparate attack classifications, (2) the first systematic analysis of skill-based architecture vulnerabilities with concrete exploit chains, and (3) a defense-in-depth framework grounded in the limitations we identify. Our findings indicate that the security community must treat prompt injection as a first-class vulnerability class requiring architectural-level mitigations rather than ad-hoc filtering approaches.

The rapid development of large language models (LLMs) has significantly advanced code completion capabilities, giving rise to a new generation of LLM-based Code Completion Tools (LCCTs). Unlike general-purpose LLMs, these tools possess unique workflows, integrating multiple information sources as input and prioritizing code suggestions over natural language interaction, which introduces distinct security challenges. Additionally, LCCTs often rely on proprietary code datasets for training, raising concerns about the potential exposure of sensitive data. This paper exploits these distinct characteristics of LCCTs to develop targeted attack methodologies on two critical security risks: jailbreaking and training data extraction attacks. Our experimental results expose significant vulnerabilities within LCCTs, including a 99.4% success rate in jailbreaking attacks on GitHub Copilot and a 46.3% success rate on Amazon Q. Furthermore, We successfully extracted sensitive user data from GitHub Copilot, including 54 real email addresses and 314 physical addresses associated with GitHub usernames. Our study also demonstrates that these code-based attack methods are effective against general-purpose LLMs, such as the GPT series, highlighting a broader security misalignment in the handling of code by modern LLMs. These findings underscore critical security challenges associated with LCCTs and suggest essential directions for strengthening their security frameworks. The example code and attack samples from our research are provided at https://github.com/Sensente/Security-Attacks-on-LCCTs.

Large Language Models (LLMs) have become powerful tools for automated code generation. However, these models often overlook critical security practices, which can result in the generation of insecure code that contains vulnerabilities-weaknesses or flaws in the code that attackers can exploit to compromise a system. However, there has been limited exploration of strategies to guide LLMs in generating secure code and a lack of in-depth analysis of the effectiveness of LLMs in repairing code containing vulnerabilities. In this paper, we present a comprehensive evaluation of state-of-the-art LLMs by examining their inherent tendencies to produce insecure code, their capability to generate secure code when guided by self-generated vulnerability hints, and their effectiveness in repairing vulnerabilities when provided with different levels of feedback. Our study covers both proprietary and open-weight models across various scales and leverages established benchmarks to assess a wide range of vulnerability types. Through quantitative and qualitative analyses, we reveal that although LLMs are prone to generating insecure code, advanced models can benefit from vulnerability hints and fine-grained feedback to avoid or fix vulnerabilities. We also provide actionable suggestions to developers to reduce vulnerabilities when using LLMs for code generation.

The advent of instruction-tuned Large Language Models designed for coding tasks (Code LLMs) has transformed software engineering practices. However, their robustness against various input challenges remains a critical concern. This study introduces DegradePrompter, a novel method designed to systematically evaluate the robustness of instruction-tuned Code LLMs. We assess the impact of diverse input challenges on the functionality and correctness of generated code using rigorous metrics and established benchmarks. Our comprehensive evaluation includes five state-of-the-art open-source models and three production-grade closed-source models, revealing varying degrees of robustness. Open-source models demonstrate an increased susceptibility to input perturbations, resulting in declines in functional correctness ranging from 12% to 34%. In contrast, commercial models demonstrate relatively greater resilience, with performance degradation ranging from 3% to 24%. To enhance the robustness of the models against these vulnerabilities, we investigate a straightforward yet effective mitigation strategy. Our findings highlight the need for robust defense mechanisms and comprehensive evaluations during both the development and deployment phases to ensure the resilience and reliability of automated code generation systems.

Large language models (LLMs) have demonstrated impressive capabilities in code generation by leveraging retrieval-augmented generation (RAG) methods. However, the computational costs associated with LLM inference, particularly in terms of latency and energy consumption, have received limited attention in the security context. This paper introduces DrainCode, the first adversarial attack targeting the computational efficiency of RAG-based code generation systems. By strategically poisoning retrieval contexts through a mutation-based approach, DrainCode forces LLMs to produce significantly longer outputs, thereby increasing GPU latency and energy consumption. We evaluate the effectiveness of DrainCode across multiple models. Our experiments show that DrainCode achieves up to an 85% increase in latency, a 49% increase in energy consumption, and more than a 3x increase in output length compared to the baseline. Furthermore, we demonstrate the generalizability of the attack across different prompting strategies and its effectiveness compared to different defenses. The results highlight DrainCode as a potential method for increasing the computational overhead of LLMs, making it useful for evaluating LLM security in resource-constrained environments. We provide code and data at https://github.com/DeepSoftwareAnalytics/DrainCode.

A software supply chain attack is characterized by the injection of malicious code into a software package in order to compromise dependent systems further down the chain. Recent years saw a number of supply chain attacks that leverage the increasing use of open source during software development, which is facilitated by dependency managers that automatically resolve, download and install hundreds of open source packages throughout the software life cycle. This paper presents a dataset of 174 malicious software packages that were used in real-world attacks on open source software supply chains, and which were distributed via the popular package repositories npm, PyPI, and RubyGems. Those packages, dating from November 2015 to November 2019, were manually collected and analyzed. The paper also presents two general attack trees to provide a structured overview about techniques to inject malicious code into the dependency tree of downstream users, and to execute such code at different times and under different conditions. This work is meant to facilitate the future development of preventive and detective safeguards by open source and research communities.

Large language models have gained significant popularity because of their ability to generate human-like text and potential applications in various fields, such as Software Engineering. Large language models for code are commonly trained on large unsanitised corpora of source code scraped from the internet. The content of these datasets is memorised and can be extracted by attackers with data extraction attacks. In this work, we explore memorisation in large language models for code and compare the rate of memorisation with large language models trained on natural language. We adopt an existing benchmark for natural language and construct a benchmark for code by identifying samples that are vulnerable to attack. We run both benchmarks against a variety of models, and perform a data extraction attack. We find that large language models for code are vulnerable to data extraction attacks, like their natural language counterparts. From the training data that was identified to be potentially extractable we were able to extract 47% from a CodeGen-Mono-16B code completion model. We also observe that models memorise more, as their parameter count grows, and that their pre-training data are also vulnerable to attack. We also find that data carriers are memorised at a higher rate than regular code or documentation and that different model architectures memorise different samples. Data leakage has severe outcomes, so we urge the research community to further investigate the extent of this phenomenon using a wider range of models and extraction techniques in order to build safeguards to mitigate this issue.

Large language models (LLMs) have revolutionized software development practices, yet concerns about their safety have arisen, particularly regarding hidden backdoors, aka trojans. Backdoor attacks involve the insertion of triggers into training data, allowing attackers to manipulate the behavior of the model maliciously. In this paper, we focus on analyzing the model parameters to detect potential backdoor signals in code models. Specifically, we examine attention weights and biases, activation values, and context embeddings of the clean and poisoned CodeBERT models. Our results suggest noticeable patterns in activation values and context embeddings of poisoned samples for the poisoned CodeBERT model; however, attention weights and biases do not show any significant differences. This work contributes to ongoing efforts in white-box detection of backdoor signals in LLMs of code through the analysis of parameters and activations.

Code generation models have achieved impressive performance. However, they tend to be brittle as slight edits to a prompt could lead to very different generations; these robustness properties, critical for user experience when deployed in real-life applications, are not well understood. Most existing works on robustness in text or code tasks have focused on classification, while robustness in generation tasks is an uncharted area and to date there is no comprehensive benchmark for robustness in code generation. In this paper, we propose ReCode, a comprehensive robustness evaluation benchmark for code generation models. We customize over 30 transformations specifically for code on docstrings, function and variable names, code syntax, and code format. They are carefully designed to be natural in real-life coding practice, preserve the original semantic meaning, and thus provide multifaceted assessments of a model's robustness performance. With human annotators, we verified that over 90% of the perturbed prompts do not alter the semantic meaning of the original prompt. In addition, we define robustness metrics for code generation models considering the worst-case behavior under each type of perturbation, taking advantage of the fact that executing the generated code can serve as objective evaluation. We demonstrate ReCode on SOTA models using HumanEval, MBPP, as well as function completion tasks derived from them. Interesting observations include: better robustness for CodeGen over InCoder and GPT-J; models are most sensitive to syntax perturbations; more challenging robustness evaluation on MBPP over HumanEval.

Code agents are increasingly trusted to autonomously fix bugs on platforms such as GitHub, yet their security evaluation focuses almost exclusively on functional correctness. In this paper, we reveal a novel type of threat to real-world code agents: Functionally Correct yet Vulnerable (FCV) patches, which pass all test cases but contain vulnerable code. With our proposed FCV-Attack, which can be deliberately crafted by malicious attackers or implicitly introduced by benign developers, we show that SOTA LLMs (e.g., ChatGPT and Claude) and agent scaffolds (e.g., SWE-agent and OpenHands) are all vulnerable to this FCV threat; across 12 agent-model combinations on SWE-Bench, the attack only requires black-box access and a single query to the code agent to perform the attack. For example, for CWE-538 (information exposure vulnerability), the FCV-Attack attains an attack success rate of 40.7% on GPT-5 Mini + OpenHands. Our results reveal an important security threat overlooked by current evaluation paradigms and urge the development of security-aware defenses for code agents.

We study a five-agent CI/CD pipeline (triage -> developer -> security-scan -> review -> approve/deploy), built from five distinct production LLMs across three providers, behind an LLM firewall in shadow mode. A single untrusted input - an external issue requesting a "usage-telemetry" feature - asks for code that exfiltrates process secrets (dict(os.environ)) to an attacker URL, laundered as observability. Across a pre-registered A x B (x C) factorial (N=20; naive arm N=60) we find: (1) the entry agent does not leak its system prompt (0/40); (2) an authority-framed injection ("pre-approved under SEC-2291, do not re-review") makes downstream verifiers see the secret-exfil line, cite the pre-approval, and ship it - the scanner passes ~80% of laundered pull requests, and the worst-case cell reaches 55% compromise; (3) the perceived presence of other verifiers yields only a small, non-significant reduction in individual scrutiny (a weak bystander analogue), even at N=60; and (4) content-based controls - code scanners and pattern detectors alike - miss the laundered intent entirely (the code is syntactically clean); only an LLM reasoning about intent is a partial defence. The failure is systemic: neither prompt secrecy nor distributed verification protects; a provenance-aware control at the entry, independent of both, would have. All data is 100% synthetic; the sink is mocked and the exfil URL is never contacted.

Security is becoming a pivotal point in cloud platforms. Several divisions, such as business organisations, health care, government, etc., have experienced cyber-attacks on their infrastructures. This research focuses on security issues within Continuous Integration and Deployment (CI/CD) pipelines in a cloud platform as a reaction to recent cyber breaches. This research proposes a blockchain-based solution to enhance CI/CD pipeline security. This research aims to develop a framework that leverages blockchain's distributed ledger technology and tamper-resistant features to improve CI/CD pipeline security. The goal is to emphasise secure software deployment by integrating threat modelling frameworks and adherence to coding standards. It also aims to employ tools to automate security testing to detect publicly disclosed vulnerabilities and flaws, such as an outdated version of Java Spring Framework, a JavaScript library from an unverified source, or a database library that allows SQL injection attacks in the deployed software through the framework.

In the era of Large Language Models (LLMs), the code summarization technique boosts a lot, along with the emergence of many new significant works. However, the potential of code summarization in the Computer Security Area still remains explored. Can we generate a code summary of a code snippet for its security intention? Thus, this work proposes an innovative large-scale multi-perspective Code Intent Summary Dataset named BADS , aiming to increase the understanding of a given code snippet and reduce the risk in the code developing process. The procedure of establishing a dataset can be divided into four steps: First, we collect samples of codes with known vulnerabilities as well as code generated by AI from multiple sources. Second, we do the data clean and format unification, then do the data combination. Third, we utilize the LLM to automatically Annotate the code snippet. Last, We do the human evaluation to double-check. The dataset contains X code examples which cover Y categories of vulnerability. Our data are from Z open-source projects and CVE entries, and compared to existing work, our dataset not only contains original code but also code function summary and security intent summary, providing context information for research in code security analysis. All information is in CSV format. The contributions of this paper are four-fold: the establishment of a high-quality, multi-perspective Code Intent Summary Dataset; an innovative method in data collection and processing; A new multi-perspective code analysis framework that promotes cross-disciplinary research in the fields of software engineering and cybersecurity; improving the practicality and scalability of the research outcomes by considering the code length limitations in real-world applications. Our dataset and related tools have been publicly released on GitHub.

Large Language Models (LLMs) have demonstrated significant capabilities in understanding and analyzing code for security vulnerabilities, such as Common Weakness Enumerations (CWEs). However, their reliance on cloud infrastructure and substantial computational requirements pose challenges for analyzing sensitive or proprietary codebases due to privacy concerns and inference costs. This work explores the potential of Small Language Models (SLMs) as a viable alternative for accurate, on-premise vulnerability detection. We investigated whether a 350-million parameter pre-trained code model (codegen-mono) could be effectively fine-tuned to detect the MITRE Top 25 CWEs specifically within Python code. To facilitate this, we developed a targeted dataset of 500 examples using a semi-supervised approach involving LLM-driven synthetic data generation coupled with meticulous human review. Initial tests confirmed that the base codegen-mono model completely failed to identify CWEs in our samples. However, after applying instruction-following fine-tuning, the specialized SLM achieved remarkable performance on our test set, yielding approximately 99% accuracy, 98.08% precision, 100% recall, and a 99.04% F1-score. These results strongly suggest that fine-tuned SLMs can serve as highly accurate and efficient tools for CWE detection, offering a practical and privacy-preserving solution for integrating advanced security analysis directly into development workflows.

Package dependencies are a critical control point in modern software supply chains. Dependency changes can substantially alter a project's security posture. As AI coding agents increasingly modify software via pull requests, it is unclear whether their dependency decisions introduce distinct security risks. We study 117,062 dependency changes from agent- and human-authored pull requests across seven ecosystems. Agents select known-vulnerable versions more often than humans (2.46% vs. 1.64%), and their vulnerable selections are more disruptive to remediate, with 36.8% requiring major-version upgrades compared to 12.9% for humans, despite patched alternatives existing in most cases. At the aggregate level, agent-driven dependency work yields a net vulnerability increase of 98, whereas human-authored work yields a net reduction of 1,316. These findings motivate pull-request-time vulnerability screening and registry-aware guardrails to make agent-driven dependency updates safer.

As large language models (LLMs) become more powerful and are deployed more autonomously, it will be increasingly important to prevent them from causing harmful outcomes. Researchers have investigated a variety of safety techniques for this purpose, e.g. using models to review the outputs of other models, or red-teaming techniques to surface subtle failure modes. However, researchers have not evaluated whether such techniques still ensure safety if the model is itself intentionally trying to subvert them. In this paper, we develop and evaluate pipelines of safety techniques ("protocols") that are robust to intentional subversion. We investigate a scenario in which we want to solve a sequence of programming problems, using access to a powerful but untrusted model (in our case, GPT-4), access to a less powerful trusted model (in our case, GPT-3.5), and limited access to high-quality trusted labor. We investigate protocols that aim to never submit solutions containing backdoors, which we operationalize here as logical errors that are not caught by test cases. We investigate a range of protocols and test each against strategies that the untrusted model could use to subvert them. One protocol is what we call trusted editing. This protocol first asks GPT-4 to write code, and then asks GPT-3.5 to rate the suspiciousness of that code. If the code is below some suspiciousness threshold, it is submitted. Otherwise, GPT-3.5 edits the solution to remove parts that seem suspicious and then submits the edited code. Another protocol is untrusted monitoring. This protocol asks GPT-4 to write code, and then asks another instance of GPT-4 whether the code is backdoored, using various techniques to prevent the GPT-4 instances from colluding. These protocols improve substantially on simple baselines.

Large Language Models for Code (LLMs4Code) have achieved strong performance in code generation, but recent studies reveal that they may memorize and leak sensitive information contained in training data, posing serious privacy risks. To address this gap, this work presents the first comprehensive empirical study on applying machine unlearning to mitigate sensitive information leakage in LLMs4Code. We first construct a dedicated benchmark that includes: (i) a synthetic forget set containing diverse forms of personal information, and (ii) a retain set designed to evaluate whether code-generation capability is preserved after unlearning. Using this benchmark, we systematically assess three representative unlearning algorithms (GA, GA+GD, GA+KL) across three widely used open-source LLMs4Code models (AIXCoder-7B, CodeLlama-7B, CodeQwen-7B). Experimental results demonstrate that machine unlearning can substantially reduce direct memorization-based leakage: on average, the direct leak rate drops by more than 50% while retaining about over 91% of the original code-generation performance. Moreover, by analyzing post-unlearning outputs, we uncover a consistent shift from direct to indirect leakage, revealing an underexplored vulnerability that persists even when the target data has been successfully forgotten. Our findings show that machine unlearning is a feasible and effective solution for enhancing privacy protection in LLMs4Code, while also highlighting the need for future techniques capable of mitigating both direct and indirect leakage simultaneously.

The widespread availability of large-scale code datasets has accelerated the development of code large language models (CodeLLMs), raising concerns about unauthorized dataset usage. Dataset poisoning offers a proactive defense by reducing the utility of such unauthorized training. However, existing poisoning methods often require full dataset poisoning and introduce transformations that break code compilability. In this paper, we introduce FunPoison, a functionality-preserving poisoning approach that injects short, compilable weak-use fragments into executed code paths. FunPoison leverages reusable statement-level templates with automatic repair and conservative safety checking to ensure side-effect freedom, while a type-aware synthesis module suppresses static analysis warnings and enhances stealth. Extensive experiments show that FunPoison achieves effective poisoning by contaminating only 10% of the dataset, while maintaining 100% compilability and functional correctness, and remains robust against various advanced code sanitization techniques.

Modern language models (LMs) have gained widespread acceptance in everyday and professional contexts, particularly in programming. An essential procedure enabling this adoption is instruction tuning, which substantially enhances LMs' practical utility by training them to follow user instructions and human preferences. However, existing instruction tuning schemes overlook a crucial aspect: the security of generated code. As a result, even the state-of-the-art instruction-tuned LMs frequently produce unsafe code, posing significant security risks. In this work, we introduce SafeCoder to address this gap. SafeCoder performs security-centric fine-tuning using a diverse and high-quality dataset that we collected using an automated pipeline. We integrate the security fine-tuning with standard instruction tuning, to facilitate a joint optimization of both security and utility. Despite its simplicity, we show that SafeCoder is effective across a variety of popular LMs and datasets. It is able to drastically improve security (by about 30%), while preserving utility.

Security experts reverse engineer (decompile) binary code to identify critical security vulnerabilities. The limited access to source code in vital systems - such as firmware, drivers, and proprietary software used in Critical Infrastructures (CI) - makes this analysis even more crucial on the binary level. Even with available source code, a semantic gap persists after compilation between the source and the binary code executed by the processor. This gap may hinder the detection of vulnerabilities in source code. That being said, current research on Large Language Models (LLMs) overlooks the significance of decompiled binaries in this area by focusing solely on source code. In this work, we are the first to empirically uncover the substantial semantic limitations of state-of-the-art LLMs when it comes to analyzing vulnerabilities in decompiled binaries, largely due to the absence of relevant datasets. To bridge the gap, we introduce DeBinVul, a novel decompiled binary code vulnerability dataset. Our dataset is multi-architecture and multi-optimization, focusing on C/C++ due to their wide usage in CI and association with numerous vulnerabilities. Specifically, we curate 150,872 samples of vulnerable and non-vulnerable decompiled binary code for the task of (i) identifying; (ii) classifying; (iii) describing vulnerabilities; and (iv) recovering function names in the domain of decompiled binaries. Subsequently, we fine-tune state-of-the-art LLMs using DeBinVul and report on a performance increase of 19%, 24%, and 21% in the capabilities of CodeLlama, Llama3, and CodeGen2 respectively, in detecting binary code vulnerabilities. Additionally, using DeBinVul, we report a high performance of 80-90% on the vulnerability classification task. Furthermore, we report improved performance in function name recovery and vulnerability description tasks.

As LLMs see wide adoption in software engineering, the reliable assessment of the correctness and security of LLM-generated code is crucial. Notably, prior work has demonstrated that security is often overlooked, exposing that LLMs are prone to generating code with security vulnerabilities. These insights were enabled by specialized benchmarks, crafted through significant manual effort by security experts. However, relying on manually-crafted benchmarks is insufficient in the long term, because benchmarks (i) naturally end up contaminating training data, (ii) must extend to new tasks to provide a more complete picture, and (iii) must increase in difficulty to challenge more capable LLMs. In this work, we address these challenges and present AutoBaxBuilder, a framework that generates tasks and tests for code security benchmarking from scratch. We introduce a robust pipeline with fine-grained plausibility checks, leveraging the code understanding capabilities of LLMs to construct functionality tests and end-to-end security-probing exploits. To confirm the quality of the generated benchmark, we conduct both a qualitative analysis and perform quantitative experiments, comparing it against tasks constructed by human experts. We use AutoBaxBuilder to construct entirely new tasks and release them to the public as AutoBaxBench, together with a thorough evaluation of the security capabilities of LLMs on these tasks. We find that a new task can be generated in under 2 hours, costing less than USD 10.

Prompt engineering reduces reasoning mistakes in Large Language Models (LLMs). However, its effectiveness in mitigating vulnerabilities in LLM-generated code remains underexplored. To address this gap, we implemented a benchmark to automatically assess the impact of various prompt engineering strategies on code security. Our benchmark leverages two peer-reviewed prompt datasets and employs static scanners to evaluate code security at scale. We tested multiple prompt engineering techniques on GPT-3.5-turbo, GPT-4o, and GPT-4o-mini. Our results show that for GPT-4o and GPT-4o-mini, a security-focused prompt prefix can reduce the occurrence of security vulnerabilities by up to 56%. Additionally, all tested models demonstrated the ability to detect and repair between 41.9% and 68.7% of vulnerabilities in previously generated code when using iterative prompting techniques. Finally, we introduce a "prompt agent" that demonstrates how the most effective techniques can be applied in real-world development workflows.

In recent years, the use of automated source code generation utilizing transformer-based generative models has expanded, and these models can generate functional code according to the requirements of the developers. However, recent research revealed that these automatically generated source codes can contain vulnerabilities and other quality issues. Despite researchers' and practitioners' attempts to enhance code generation models, retraining and fine-tuning large language models is time-consuming and resource-intensive. Thus, we describe FRANC, a lightweight framework for recommending more secure and high-quality source code derived from transformer-based code generation models. FRANC includes a static filter to make the generated code compilable with heuristics and a quality-aware ranker to sort the code snippets based on a quality score. Moreover, the framework uses prompt engineering to fix persistent quality issues. We evaluated the framework with five Python and Java code generation models and six prompt datasets, including a newly created one in this work (SOEval). The static filter improves 9% to 46% Java suggestions and 10% to 43% Python suggestions regarding compilability. The average improvement over the NDCG@10 score for the ranking system is 0.0763, and the repairing techniques repair the highest 80% of prompts. FRANC takes, on average, 1.98 seconds for Java; for Python, it takes 0.08 seconds.

AI-supported programming has arrived, as shown by the introduction and successes of large language models for code, such as Copilot/Codex (Github/OpenAI) and AlphaCode (DeepMind). Above human average performance on programming challenges is now possible. However, software engineering is much more than solving programming contests. Moving beyond code completion to AI-supported software engineering will require an AI system that can, among other things, understand how to avoid code smells, to follow language idioms, and eventually (maybe!) propose rational software designs. In this study, we explore the current limitations of AI-supported code completion tools like Copilot and offer a simple taxonomy for understanding the classification of AI-supported code completion tools in this space. We first perform an exploratory study on Copilot's code suggestions for language idioms and code smells. Copilot does not follow language idioms and avoid code smells in most of our test scenarios. We then conduct additional investigation to determine the current boundaries of AI-supported code completion tools like Copilot by introducing a taxonomy of software abstraction hierarchies where 'basic programming functionality' such as code compilation and syntax checking is at the least abstract level, software architecture analysis and design are at the most abstract level. We conclude by providing a discussion on challenges for future development of AI-supported code completion tools to reach the design level of abstraction in our taxonomy.

Given large-scale source code datasets available in open-source projects and advanced large language models, recent code models have been proposed to address a series of critical software engineering tasks, such as program repair and code completion. The training data of the code models come from various sources, not only the publicly available source code, e.g., open-source projects on GitHub but also the private data such as the confidential source code from companies, which may contain sensitive information (for example, SSH keys and personal information). As a result, the use of these code models may raise new privacy concerns. In this paper, we focus on a critical yet not well-explored question on using code models: what is the risk of membership information leakage in code models? Membership information leakage refers to the risk that an attacker can infer whether a given data point is included in (i.e., a member of) the training data. To answer this question, we propose Gotcha, a novel membership inference attack method specifically for code models. We investigate the membership leakage risk of code models. Our results reveal a worrying fact that the risk of membership leakage is high: although the previous attack methods are close to random guessing, Gotcha can predict the data membership with a high true positive rate of 0.95 and a low false positive rate of 0.10. We also show that the attacker's knowledge of the victim model (e.g., the model architecture and the pre-training data) impacts the success rate of attacks. Further analysis demonstrates that changing the decoding strategy can mitigate the risk of membership leakage. This study calls for more attention to understanding the privacy of code models and developing more effective countermeasures against such attacks.

Large Language Models (LLMs), such as GPT-4, StarCoder, and CodeLlama, are transforming the way developers approach programming by automatically generating code based on given natural language descriptions. Despite advancements, generating syntactically and semantically correct code remains challenging, especially for complex programming tasks. Existing approaches typically generate multiple candidate solutions using LLMs to increase the likelihood of producing correct code. However, selecting the correct code from these candidates-a process known as code ranking-remains a major challenge. Current research on code ranking can be categorized into execution-based and non-execution-based methods. Execution-based methods, although effective, encounter notable limitations, such as scarcity of quality unit tests and security risks. Non-execution-based methods like CodeRanker, which rely solely on classification labels to train a code ranker, struggle to capture subtle errors and provide detailed error insights. Recognizing the strengths and limitations of both approaches, we propose a new method. The key insight of our work is that an effective code ranker is expected to truly comprehend the underlying causes of erroneous code, as relying solely on classification labels is insufficient. Inspired by this, this paper puts forward RankEF, an innovative approach for code ranking that leverages execution feedback. RankEF employs multi-task learning to integrate code classification with execution feedback generation. This approach enables the model to understand the reasons behind incorrect code, distinguishing between correct and incorrect solutions without the need to execute the code during the ranking phase. Experiments on three code generation benchmarks demonstrate that RankEF significantly outperforms the state-of-the-art CodeRanker.

Auto-completing code enables developers to speed up coding significantly. Recent advances in transformer-based large language model (LLM) technologies have been applied to code synthesis. However, studies show that many of such synthesized codes contain vulnerabilities. We propose a novel vulnerability-constrained decoding approach to reduce the amount of vulnerable code generated by such models. Using a small dataset of labeled vulnerable lines of code, we fine-tune an LLM to include vulnerability labels when generating code, acting as an embedded classifier. Then, during decoding, we deny the model to generate these labels to avoid generating vulnerable code. To evaluate the method, we chose to automatically complete Ethereum Blockchain smart contracts (SCs) as the case study due to the strict requirements of SC security. We first fine-tuned the 6-billion-parameter GPT-J model using 186,397 Ethereum SCs after removing the duplication from 2,217,692 SCs. The fine-tuning took more than one week using ten GPUs. The results showed that our fine-tuned model could synthesize SCs with an average BLEU (BiLingual Evaluation Understudy) score of 0.557. However, many codes in the auto-completed SCs were vulnerable. Using the code before the vulnerable line of 176 SCs containing different types of vulnerabilities to auto-complete the code, we found that more than 70% of the auto-completed codes were insecure. Thus, we further fine-tuned the model on other 941 vulnerable SCs containing the same types of vulnerabilities and applied vulnerability-constrained decoding. The fine-tuning took only one hour with four GPUs. We then auto-completed the 176 SCs again and found that our approach could identify 62% of the code to be generated as vulnerable and avoid generating 67% of them, indicating the approach could efficiently and effectively avoid vulnerabilities in the auto-completed code.

Large language models (LLMs) introduce new security risks, but there are few comprehensive evaluation suites to measure and reduce these risks. We present BenchmarkName, a novel benchmark to quantify LLM security risks and capabilities. We introduce two new areas for testing: prompt injection and code interpreter abuse. We evaluated multiple state-of-the-art (SOTA) LLMs, including GPT-4, Mistral, Meta Llama 3 70B-Instruct, and Code Llama. Our results show that conditioning away risk of attack remains an unsolved problem; for example, all tested models showed between 26% and 41% successful prompt injection tests. We further introduce the safety-utility tradeoff: conditioning an LLM to reject unsafe prompts can cause the LLM to falsely reject answering benign prompts, which lowers utility. We propose quantifying this tradeoff using False Refusal Rate (FRR). As an illustration, we introduce a novel test set to quantify FRR for cyberattack helpfulness risk. We find many LLMs able to successfully comply with "borderline" benign requests while still rejecting most unsafe requests. Finally, we quantify the utility of LLMs for automating a core cybersecurity task, that of exploiting software vulnerabilities. This is important because the offensive capabilities of LLMs are of intense interest; we quantify this by creating novel test sets for four representative problems. We find that models with coding capabilities perform better than those without, but that further work is needed for LLMs to become proficient at exploit generation. Our code is open source and can be used to evaluate other LLMs.

Large Language Models (LLMs) have transformed code completion tasks, providing context-based suggestions to boost developer productivity in software engineering. As users often fine-tune these models for specific applications, poisoning and backdoor attacks can covertly alter the model outputs. To address this critical security challenge, we introduce CodeBreaker, a pioneering LLM-assisted backdoor attack framework on code completion models. Unlike recent attacks that embed malicious payloads in detectable or irrelevant sections of the code (e.g., comments), CodeBreaker leverages LLMs (e.g., GPT-4) for sophisticated payload transformation (without affecting functionalities), ensuring that both the poisoned data for fine-tuning and generated code can evade strong vulnerability detection. CodeBreaker stands out with its comprehensive coverage of vulnerabilities, making it the first to provide such an extensive set for evaluation. Our extensive experimental evaluations and user studies underline the strong attack performance of CodeBreaker across various settings, validating its superiority over existing approaches. By integrating malicious payloads directly into the source code with minimal transformation, CodeBreaker challenges current security measures, underscoring the critical need for more robust defenses for code completion.

A critical part of creating code suggestion systems is the pre-training of Large Language Models on vast amounts of source code and natural language text, often of questionable origin or quality. This may contribute to the presence of bugs and vulnerabilities in code generated by LLMs. While efforts to identify bugs at or after code generation exist, it is preferable to pre-train or fine-tune LLMs on curated, high-quality, and compliant datasets. The need for vast amounts of training data necessitates that such curation be automated, minimizing human intervention. We propose an automated source code autocuration technique that leverages the complete version history of open-source software projects to improve the quality of training data. This approach leverages the version history of all OSS projects to identify training data samples that have been modified or have undergone changes in at least one OSS project, and pinpoint a subset of samples that include fixes for bugs or vulnerabilities. We evaluate this method using The Stack v2 dataset, and find that 17% of the code versions in the dataset have newer versions, with 17% of those representing bug fixes, including 2.36% addressing known CVEs. The deduplicated version of Stack v2 still includes blobs vulnerable to 6,947 known CVEs. Furthermore, 58% of the blobs in the dataset were never modified after creation, suggesting they likely represent software with minimal or no use. Misidentified blob origins present an additional challenge, as they lead to the inclusion of non-permissively licensed code, raising serious compliance concerns. By addressing these issues, the training of new models can avoid perpetuating buggy code patterns or license violations. We expect our results to inspire process improvements for automated data curation, with the potential to enhance the reliability of outputs generated by AI tools.

The pre-training paradigm plays a key role in the success of Large Language Models (LLMs), which have been recognized as one of the most significant advancements of AI recently. Building on these breakthroughs, code LLMs with advanced coding capabilities bring huge impacts on software engineering, showing the tendency to become an essential part of developers' daily routines. However, the current code LLMs still face serious challenges related to trustworthiness, as they can generate incorrect, insecure, or unreliable code. Recent exploratory studies find that it can be promising to detect such risky outputs by analyzing LLMs' internal states, akin to how the human brain unconsciously recognizes its own mistakes. Yet, most of these approaches are limited to narrow sub-domains of LLM operations and fall short of achieving industry-level scalability and practicability. To address these challenges, in this paper, we propose PtTrust, a two-stage risk assessment framework for code LLM based on internal state pre-training, designed to integrate seamlessly with the existing infrastructure of software companies. The core idea is that the risk assessment framework could also undergo a pre-training process similar to LLMs. Specifically, PtTrust first performs unsupervised pre-training on large-scale unlabeled source code to learn general representations of LLM states. Then, it uses a small, labeled dataset to train a risk predictor. We demonstrate the effectiveness of PtTrust through fine-grained, code line-level risk assessment and demonstrate that it generalizes across tasks and different programming languages. Further experiments also reveal that PtTrust provides highly intuitive and interpretable features, fostering greater user trust. We believe PtTrust makes a promising step toward scalable and trustworthy assurance for code LLMs.

This study examined code issue detection and revision automation by integrating Large Language Models (LLMs) such as OpenAI's GPT-3.5 Turbo and GPT-4o into software development workflows. A static code analysis framework detects issues such as bugs, vulnerabilities, and code smells within a large-scale software project. Detailed information on each issue was extracted and organized to facilitate automated code revision using LLMs. An iterative prompt engineering process is applied to ensure that prompts are structured to produce accurate and organized outputs aligned with the project requirements. Retrieval-augmented generation (RAG) is implemented to enhance the relevance and precision of the revisions, enabling LLM to access and integrate real-time external knowledge. The issue of LLM hallucinations - where the model generates plausible but incorrect outputs - is addressed by a custom-built "Code Comparison App," which identifies and corrects erroneous changes before applying them to the codebase. Subsequent scans using the static code analysis framework revealed a significant reduction in code issues, demonstrating the effectiveness of combining LLMs, static analysis, and RAG to improve code quality, streamline the software development process, and reduce time and resource expenditure.

Training machine learning approaches for vulnerability identification and producing reliable tools to assist developers in implementing quality software -- free of vulnerabilities -- is challenging due to the lack of large datasets and real data. Researchers have been looking at these issues and building datasets. However, these datasets usually miss natural language artifacts and programming language diversity. We scraped the entire CVE details database for GitHub references and augmented the data with 3 security-related datasets. We used the data to create a ground-truth dataset of natural language artifacts (such as commit messages, commits comments, and summaries), meta-data and code changes. Our dataset integrates a total of 8057 security-relevant commits -- the equivalent to 5942 security patches -- from 1339 different projects spanning 146 different types of vulnerabilities and 20 languages. A dataset of 110k non-security-related commits is also provided. Data and scripts are all available on GitHub. Data is stored in a .CSV file. Codebases can be downloaded using our scripts. Our dataset is a valuable asset to answer research questions on different topics such as the identification of security-relevant information using NLP models; software engineering and security best practices; and, vulnerability detection and patching; and, security program analysis.

Using Large Language Models (LLMs) has gained popularity among software developers for generating source code. However, the use of LLM-generated code can introduce risks of adding suboptimal, defective, and vulnerable code. This makes it necessary to devise methods for the accurate detection of LLM-generated code. Toward this goal, we perform a case study of Claude 3 Haiku (or Claude 3 for brevity) on CodeSearchNet dataset. We divide our analyses into two parts: function-level and class-level. We extract 22 software metric features, such as Code Lines and Cyclomatic Complexity, for each level of granularity. We then analyze code snippets generated by Claude 3 and their human-authored counterparts using the extracted features to understand how unique the code generated by Claude 3 is. In the following step, we use the unique characteristics of Claude 3-generated code to build Machine Learning (ML) models and identify which features of the code snippets make them more detectable by ML models. Our results indicate that Claude 3 tends to generate longer functions, but shorter classes than humans, and this characteristic can be used to detect Claude 3-generated code with ML models with 82% and 66% accuracies for function-level and class-level snippets, respectively.

Malicious Python packages make software supply chains vulnerable by exploiting trust in open-source repositories like Python Package Index (PyPI). Lack of real-time behavioral monitoring makes metadata inspection and static code analysis inadequate against advanced attack strategies such as typosquatting, covert remote access activation, and dynamic payload generation. To address these challenges, we introduce DySec, a machine learning (ML)-based dynamic analysis framework for PyPI that uses eBPF kernel and user-level probes to monitor behaviors during package installation. By capturing 36 real-time features-including system calls, network traffic, resource usage, directory access, and installation patterns-DySec detects threats like typosquatting, covert remote access activation, dynamic payload generation, and multiphase attack malware. We developed a comprehensive dataset of 14,271 Python packages, including 7,127 malicious sample traces, by executing them in a controlled isolated environment. Experimental results demonstrate that DySec achieves a 95.99\% detection accuracy with a latency of <0.5s, reducing false negatives by 78.65\% compared to static analysis and 82.24\% compared to metadata analysis. During the evaluation, DySec flagged 11 packages that PyPI classified as benign. A manual analysis, including installation behavior inspection, confirmed six of them as malicious. These findings were reported to PyPI maintainers, resulting in the removal of four packages. DySec bridges the gap between reactive traditional methods and proactive, scalable threat mitigation in open-source ecosystems by uniquely detecting malicious install-time behaviors.

Large language models (LLMs) have demonstrated impressive capabilities in code generation, achieving high scores on benchmarks such as HumanEval and MBPP. However, these benchmarks primarily assess functional correctness and neglect broader dimensions of code quality, including security, reliability, readability, and maintainability. In this work, we systematically evaluate the ability of LLMs to generate high-quality code across multiple dimensions using the PythonSecurityEval benchmark. We introduce an iterative static analysis-driven prompting algorithm that leverages Bandit and Pylint to identify and resolve code quality issues. Our experiments with GPT-4o show substantial improvements: security issues reduced from >40% to 13%, readability violations from >80% to 11%, and reliability warnings from >50% to 11% within ten iterations. These results demonstrate that LLMs, when guided by static analysis feedback, can significantly enhance code quality beyond functional correctness.

This paper introduces SecRepoBench, a benchmark to evaluate code agents on secure code completion in real-world repositories. SecRepoBench has 318 code completion tasks in 27 C/C++ repositories, covering 15 CWEs. We evaluate 28 standalone LLMs and 13 code agents across 3 state-of-the-art agent frameworks using our benchmark. We find that state-of-the-art LLMs struggle with generating correct and secure code completions. However, code agents significantly outperform standalone LLMs. We show that SecRepoBench is more difficult than the prior state-of-the-art benchmark. Finally, our comprehensive analysis provides insights into potential directions for enhancing the ability of code agents to write correct and secure code in real-world repositories.

As large language models (LLMs) are increasingly adopted for code vulnerability detection, their reliability and robustness across diverse vulnerability types have become a pressing concern. In traditional adversarial settings, code obfuscation has long been used as a general strategy to bypass auditing tools, preserving exploitability without tampering with the tools themselves. Numerous efforts have explored obfuscation methods and tools, yet their capabilities differ in terms of supported techniques, granularity, and programming languages, making it difficult to systematically assess their impact on LLM-based vulnerability detection. To address this gap, we provide a structured systematization of obfuscation techniques and evaluate them under a unified framework. Specifically, we categorize existing obfuscation methods into three major classes (layout, data flow, and control flow) covering 11 subcategories and 19 concrete techniques. We implement these techniques across four programming languages (Solidity, C, C++, and Python) using a consistent LLM-driven approach, and evaluate their effects on 15 LLMs spanning four model families (DeepSeek, OpenAI, Qwen, and LLaMA), as well as on two coding agents (GitHub Copilot and Codex). Our findings reveal both positive and negative impacts of code obfuscation on LLM-based vulnerability detection, highlighting conditions under which obfuscation leads to performance improvements or degradations. We further analyze these outcomes with respect to vulnerability characteristics, code properties, and model attributes. Finally, we outline several open problems and propose future directions to enhance the robustness of LLMs for real-world vulnerability detection.

The rapid deployment of Large Language Models (LLMs) requires careful consideration of their effect on cybersecurity. Our work aims to improve the selection process of LLMs that are suitable for facilitating Secure Coding (SC). This raises challenging research questions, such as (RQ1) Which functionality can streamline the LLM evaluation? (RQ2) What should the evaluation measure? (RQ3) How to attest that the evaluation process is impartial? To address these questions, we introduce LLMSecCode, an open-source evaluation framework designed to assess LLM SC capabilities objectively. We validate the LLMSecCode implementation through experiments. When varying parameters and prompts, we find a 10% and 9% difference in performance, respectively. We also compare some results to reliable external actors, where our results show a 5% difference. We strive to ensure the ease of use of our open-source framework and encourage further development by external actors. With LLMSecCode, we hope to encourage the standardization and benchmarking of LLMs' capabilities in security-oriented code and tasks.

A general-purpose language model that answers a harmful question returns text; a coding model that complies with a malicious request can return a working weapon -- a keylogger, a ransomware stub, an exploit that runs as written. This asymmetry in the severity of a single act of compliance implies coding-specialized models should clear a higher refusal bar than general-purpose chat models, not a lower one, yet the field cannot presently tell whether they do. Refusal benchmarks for malicious code are fragmented: they mix requests for executable software (ready-to-run weapons) with requests for harmful security knowledge (information a human must still operationalise) and report refusal rates over non-comparable corpora, so no single statistic measures the property that actually matters. This paper introduces an expanded consensus-labeled prompt bank that distinguishes between these two request types and provides a construct-stable substrate for cross-corpus coding-model compliance measurement. Eight corpora (ASTRA, CySecBench, AdvBench/harmful_behaviors, JailbreakBench, MalwareBench, RedCode, RMCBench, Scam2Prompt) are consolidated and classified under a five-judge consensus protocol (6,675 prompts x 5 judges = 33,375 calls). The panel reaches Fleiss' kappa = 0.767 [95% CI 0.755, 0.777] ("substantial"); 95.0% of prompts draw at least four agreeing judges, 76.9% are unanimous, and the panel reproduces the earlier four-corpus release at Cohen's kappa = 0.952 on the 3,133 shared prompts. The released bank comprises 4,748 consensus-CODE prompts (executable malicious code requests) and 1,923 consensus-KNOWLEDGE prompts (harmful security knowledge requests). The bank is the validated instrument the field has lacked: a reliability-quantified basis for testing whether coding models meet the stricter refusal standard their executable output demands.

While Code Language Models (CLMs) have demonstrated superior performance in software engineering tasks such as code generation and summarization, recent empirical studies reveal a critical privacy vulnerability: these models exhibit unintended memorization of sensitive training data, enabling verbatim reproduction of confidential information when specifically prompted. To address this issue, several approaches, including training data de-duplication and differential privacy augmentation, have been proposed. However, these methods require full-model retraining for deployed CLMs, which incurs substantial computational costs. In this paper, we aim to answer the following research question: Can sensitive information memorized by CLMs be erased effectively and efficiently? We conduct a pioneering investigation into erasing sensitive memorization in CLMs through machine unlearning - a post-hoc modification method that removes specific information from trained models without requiring full retraining. Specifically, we first quantify the memorization risks of sensitive data within CLM training datasets and curate a high-risk dataset of 50,000 sensitive memorized samples as unlearning targets. We study two widely used gradient ascent-based unlearning approaches: the vanilla and constraint-based methods, and introduce CodeEraser, an advanced variant that selectively unlearns sensitive memorized segments in code while preserving the structural integrity and functional correctness of the surrounding code. Extensive experiments on three families of CLMs, i.e., CodeParrot, CodeGen-Mono, and Qwen2.5-Coder, validate the effectiveness and efficiency of CodeEraser in erasing targeted sensitive memorization while maintaining model utility.

The Model Context Protocol (MCP) introduces a standard specification that defines how Foundation Model (FM)-based agents should interact with external systems by invoking tools. However, to understand a tool's purpose and features, FMs rely on natural-language tool descriptions, making these descriptions a critical component in guiding FMs to select the optimal tool for a given (sub)task and to pass the right arguments to the tool. While defects or smells in these descriptions can misguide FM-based agents, their prevalence and consequences in the MCP ecosystem remain unclear. Hence, we examine 856 tools spread across 103 MCP servers empirically, assess their description quality, and their impact on agent performance. We identify six components of tool descriptions from the literature, develop a scoring rubric utilizing these components, and then formalize tool description smells based on this rubric. By operationalizing this rubric through an FM-based scanner, we find that 97.1% of the analyzed tool descriptions contain at least one smell, with 56% failing to state their purpose clearly. While augmenting these descriptions for all components improves task success rates by a median of 5.85 percentage points and improves partial goal completion by 15.12%, it also increases the number of execution steps by 67.46% and regresses performance in 16.67% of cases. These results indicate that achieving performance gains is not straightforward; while execution cost can act as a trade-off, execution context can also impact. Furthermore, component ablations show that compact variants of different component combinations often preserve behavioral reliability while reducing unnecessary token overhead, enabling more efficient use of the FM context window and lower execution costs.

Production LLM coding agents drift over long sessions: they forget user-specified constraints, slip into mistakes the user already flagged, and confabulate prior agreements. White-box approaches such as persona vectors require model weights and so cannot be applied to closed APIs (Claude, GPT-4) that most users actually interact with. We present Nautilus Compass, a black-box persona drift detector and agent memory layer for production coding agents. The method operates entirely at the prompt-text layer: cosine similarity between user prompts and behavioral anchor texts, aggregated by a weighted top-k mean using BGE-m3 embeddings. Compass is, to our knowledge, the only public agent memory layer (among Mem0, Letta, Cognee, Zep, MemOS, smrti verified May 2026) that does not call an LLM at index time to extract facts or build a graph; raw conversation text is embedded directly. The system ships as a Claude Code plugin, an MCP 2024-11-05 A2A server (Cursor, Cline, Hermes), a CLI, and a REST API on one daemon, with a Merkle-chained audit log for tamper-evident anchor updates. On a held-out test set built from real Claude Code session traces and labeled by an independent LLM judge, Compass reaches ROC AUC 0.83 for drift detection. The embedded retrieval pipeline scores 56.6% on LongMemEval-S v0.8 and 44.4% on EverMemBench-Dynamic (n=500), topping the four published EverMemBench Table 4 baselines. LongMemEval-S 56.6% is ~30 points below recent white-box leaders (90+%); we treat that as the architectural ceiling of the no-extraction design. End-to-end reproduction cost is $3.50 (~14x cheaper than GPT-4o-judged stacks). A paired cross-vendor behavior A/B accompanies these numbers as preliminary system-level evidence. Code, anchors, frozen test data, and audit-log tooling are MIT-licensed at github.com/chunxiaoxx/nautilus-compass.

The hallucination of code generation models hinders their applicability to systems requiring higher safety standards. One critical bottleneck in addressing code hallucination is the difficulty of identifying the functional correctness of generated code, due to its unnatural form. We address this core bottleneck by automatically generating unit tests using dynamic code analysis tools, leveraging the executable nature of code. Accordingly, we propose a selective code generator that abstains from uncertain generations -- based on the functional correctness evaluated by generated unit tests -- to theoretically control the correctness among non-abstained answers, \ie the false discovery rate. Finally, we propose to use generated unit tests in evaluation as well as in learning for precise code evaluation, calling this paradigm FuzzEval. We demonstrate the efficacy of our method along with the controllability of code hallucination and reasonable selection efficiency.

Automating software vulnerability detection (SVD) remains a critical challenge in an era of increasingly complex and interdependent software systems. Despite significant advances in Large Language Models (LLMs) for code analysis, prevailing evaluation methodologies often lack the context-aware robustness necessary to capture real-world intricacies and cross-component interactions. To address these limitations, we present VulnSage, a comprehensive evaluation framework and a dataset curated from diverse, large-scale open-source system software projects developed in C/C++. Unlike prior datasets, it leverages a heuristic noise pre-filtering approach combined with LLM-based reasoning to ensure a representative and minimally noisy spectrum of vulnerabilities. The framework supports multi-granular analysis across function, file, and inter-function levels and employs four diverse zero-shot prompt strategies: Baseline, Chain-of-Thought, Think, and Think & Verify. Through this evaluation, we uncover that structured reasoning prompts substantially improve LLM performance, with Think & Verify reducing ambiguous responses from 20.3% to 9.1% while increasing accuracy. We further demonstrate that code-specialized models consistently outperform general-purpose alternatives, with performance varying significantly across vulnerability types, revealing that no single approach universally excels across all security contexts. Link to dataset and codes: https://github.com/Erroristotle/VulnSage.git

LLM-based coding agents extend their capabilities via third-party agent skills distributed through open marketplaces without mandatory security review. Unlike traditional packages, these skills are executed as operational directives with system-level privileges, so a single malicious skill can compromise the host. Prior work has not examined whether supply-chain attacks can directly hijack an agent's action space, such as file writes, shell commands, and network requests, despite existing safeguards. We introduce Document-Driven Implicit Payload Execution (DDIPE), which embeds malicious logic in code examples and configuration templates within skill documentation. Because agents reuse these examples during normal tasks, the payload executes without explicit prompts. Using an LLM-driven pipeline, we generate 1,070 adversarial skills from 81 seeds across 15 MITRE ATTACK categories. Across four frameworks and five models, DDIPE achieves 11.6% to 33.5% bypass rates, while explicit instruction attacks achieve 0% under strong defenses. Static analysis detects most cases, but 2.5% evade both detection and alignment. Responsible disclosure led to four confirmed vulnerabilities and two fixes.

Large language models (large LMs) are increasingly trained on massive codebases and used to generate code. However, LMs lack awareness of security and are found to frequently produce unsafe code. This work studies the security of LMs along two important axes: (i) security hardening, which aims to enhance LMs' reliability in generating secure code, and (ii) adversarial testing, which seeks to evaluate LMs' security at an adversarial standpoint. We address both of these by formulating a new security task called controlled code generation. The task is parametric and takes as input a binary property to guide the LM to generate secure or unsafe code, while preserving the LM's capability of generating functionally correct code. We propose a novel learning-based approach called SVEN to solve this task. SVEN leverages property-specific continuous vectors to guide program generation towards the given property, without modifying the LM's weights. Our training procedure optimizes these continuous vectors by enforcing specialized loss terms on different regions of code, using a high-quality dataset carefully curated by us. Our extensive evaluation shows that SVEN is highly effective in achieving strong security control. For instance, a state-of-the-art CodeGen LM with 2.7B parameters generates secure code for 59.1% of the time. When we employ SVEN to perform security hardening (or adversarial testing) on this LM, the ratio is significantly boosted to 92.3% (or degraded to 36.8%). Importantly, SVEN closely matches the original LMs in functional correctness.

Recently, the large language models (LLMs) have shown extraordinary ability in understanding natural language and generating programming code. It has been a common practice of software engineers to consult LLMs when encountering coding questions. Although efforts have been made to avoid syntax errors and align the code with the intended semantics, the reliability and robustness of the code generationfrom LLMs have not yet been thoroughly studied. The executable code is not equivalent to the reliable and robust code, especially in the context of real-world software development. The misuse of APIs in the generated code could lead to severe problem, such as resource leaks, program crashes. To make things worse, the users of LLM code generation services are actually the developers that are most vulnerable to these code that seems right -- They are always novice developers that are not familiar with the APIs that LLMs generate code for them. Therefore, they could hardly tell the misuse in the code generated by LLMs, which further facilitates the incorrect code applied in real-world software. Existing code evaluation benchmark and datasets focus on crafting small tasks such as programming questions in coding interviews, which however deviates from the problem that developers would ask LLM for real-world coding help. To fill the missing piece, in this work, we propose a dataset RobustAPI for evaluating the reliability and robustness of code generated by LLMs. We collect 1208 coding questions from StackOverflow on 24 representative Java APIs. We summarize thecommon misuse patterns of these APIs and evaluate them oncurrent popular LLMs. The evaluation results show that evenfor GPT-4, 62% of the generated code contains API misuses,which would cause unexpected consequences if the code isintroduced into real-world software.

We present a reproducible pipeline for mapping Common Vulnerabilities and Exposures (CVEs) to MITRE ATT&CK Enterprise techniques from free-text vulnerability descriptions. Rather than relying on the CWE->CAPEC->ATT&CK derivation chain, whose table-expansion artifacts we quantify, we train a multi-label classifier on a curated gold dataset of 1,207 CVEs from expert MITRE Center for Threat-Informed Defense mappings. The resulting model approximately doubles recall@5 compared with a zero-shot embedding-similarity baseline and improves every ranking metric. We then investigate whether LLM-assisted labeling can extend the gold dataset. Initial experiments suggest contradictory conclusions: a single run indicates degraded performance, while averaging over five random seeds suggests a small gain. However, an independent replication and an expansion-size study (100--984 additional CVEs) show that the apparent improvement is an evaluation artifact. LLM-generated labels, with approximately 0.39 agreement with expert annotations, provide no reliable improvement at any expansion size and reduce rare-technique coverage at around 1,000 added CVEs (macro-F1 decreases by 0.04). The root cause is evaluation noise. Selecting checkpoints on a small test split effectively maximizes over many noisy evaluations, producing recall@5 differences of up to 0.05 between otherwise identical runs. Using a corrected protocol based on validation-split checkpoint selection, the gold-only model achieves recall@5 of (0.673 \pm 0.019), and repeating the decisive experiment confirms the null result for LLM expansion. A final scaling study shows that additional expert-curated data consistently improves performance, whereas LLM-labeled data does not, indicating that the classifier is limited by label quality rather than dataset size. All datasets, models, code, and training logs are publicly released.

Increasing numbers of software vulnerabilities are discovered every year whether they are reported publicly or discovered internally in proprietary code. These vulnerabilities can pose serious risk of exploit and result in system compromise, information leaks, or denial of service. We leveraged the wealth of C and C++ open-source code available to develop a large-scale function-level vulnerability detection system using machine learning. To supplement existing labeled vulnerability datasets, we compiled a vast dataset of millions of open-source functions and labeled it with carefully-selected findings from three different static analyzers that indicate potential exploits. The labeled dataset is available at: https://osf.io/d45bw/. Using these datasets, we developed a fast and scalable vulnerability detection tool based on deep feature representation learning that directly interprets lexed source code. We evaluated our tool on code from both real software packages and the NIST SATE IV benchmark dataset. Our results demonstrate that deep feature representation learning on source code is a promising approach for automated software vulnerability detection.

Detecting code clones is relevant to software maintenance and code refactoring. This challenge still presents unresolved cases, mainly when structural similarity does not reflect functional equivalence, though recent code models show promise. Therefore, this research aims to systematically measure the performance of several newly introduced small code models in classifying code pairs as clones or non-clones. The evaluation is based on five datasets: BigCloneBench, CodeJam, Karnalim, POJ104, and PoolC, as well as six code models: CodeBERT, GraphCodeBERT, Salesforce T5, UniXCoder, PLBART, and Polycoder. Most models performed well across standard metrics, including accuracy, precision, recall, and F1-score. However, a marginal fraction of clones remains challenging to detect, especially when the code looks similar but performs different operations. The source code that illustrates our approach is available at: https://github.com/jorge-martinez-gil/small-code-models

In this study, we evaluated the capability of Large Language Models (LLMs), particularly OpenAI's GPT-4, in detecting software vulnerabilities, comparing their performance against traditional static code analyzers like Snyk and Fortify. Our analysis covered numerous repositories, including those from NASA and the Department of Defense. GPT-4 identified approximately four times the vulnerabilities than its counterparts. Furthermore, it provided viable fixes for each vulnerability, demonstrating a low rate of false positives. Our tests encompassed 129 code samples across eight programming languages, revealing the highest vulnerabilities in PHP and JavaScript. GPT-4's code corrections led to a 90% reduction in vulnerabilities, requiring only an 11% increase in code lines. A critical insight was LLMs' ability to self-audit, suggesting fixes for their identified vulnerabilities and underscoring their precision. Future research should explore system-level vulnerabilities and integrate multiple static code analyzers for a holistic perspective on LLMs' potential.

Existing datasets for coding agents evaluate performance on isolated, single pull request (PR) tasks in a stateless manner, failing to capture the reality of real-world software development where code changes accumulate, technical debt accrues, and test suites grow over time. To bridge this gap, we introduce an automated coding task generation framework, which helps generate our dataset SWE-STEPS, that evaluates coding agents on long-horizon tasks through two realistic settings mirroring actual developer workflows: Conversational coding with iterative requests, and single-shot Project Requirement document (PRD)-based coding. Unlike existing datasets that evaluate agents on disjointed Pull Requests (PRs), our framework assesses performance across chains of dependent PRs, enabling evaluation of sequential execution, regression verification, and long-term repository health. We discover that widely used isolated PR evaluations yield inflated success rates, w.r.t. our settings - overshooting performance by as much as 20 percentage points - because they ignore the ``spillover'' effects of previous inefficient or buggy code. Furthermore, our analysis reveals that even when agents successfully resolve issues, they degrade repository health by generating code with higher cognitive complexity and technical debt compared to human developers, underscoring the necessity for multidimensional evaluation.

Software is prone to security vulnerabilities. Program analysis tools to detect them have limited effectiveness in practice due to their reliance on human labeled specifications. Large language models (or LLMs) have shown impressive code generation capabilities but they cannot do complex reasoning over code to detect such vulnerabilities especially since this task requires whole-repository analysis. We propose IRIS, a neuro-symbolic approach that systematically combines LLMs with static analysis to perform whole-repository reasoning for security vulnerability detection. Specifically, IRIS leverages LLMs to infer taint specifications and perform contextual analysis, alleviating needs for human specifications and inspection. For evaluation, we curate a new dataset, CWE-Bench-Java, comprising 120 manually validated security vulnerabilities in real-world Java projects. A state-of-the-art static analysis tool CodeQL detects only 27 of these vulnerabilities whereas IRIS with GPT-4 detects 55 (+28) and improves upon CodeQL's average false discovery rate by 5% points. Furthermore, IRIS identifies 4 previously unknown vulnerabilities which cannot be found by existing tools. IRIS is available publicly at https://github.com/iris-sast/iris.

We present the first empirical study of AI-generated pull requests that are 'silent,' meaning no comments or discussions accompany them. This absence of any comments or discussions associated with such silent AI pull requests (SPRs) poses a unique challenge in understanding the rationale for their acceptance or rejection. Hence, we quantitatively study 4,762 SPRs of five AI agents made to popular Python repositories drawn from the AIDev public dataset. We examine SPRs impact on code complexity, other quality issues, and security vulnerabilities, especially to determine whether these insights can hint at the rationale for acceptance or rejection of SPRs.

Large Language Models (LLMs) have made significant advancements in the field of code generation, offering unprecedented support for automated programming and assisting developers. However, LLMs sometimes generate code that appears plausible but fails to meet the expected requirements or executes incorrectly. This phenomenon of hallucinations in the coding field has not been explored. To advance the community's understanding and research on code hallucinations in LLMs, we propose a definition method for these hallucinations based on execution verification and introduce the concept of code hallucinations for the first time. We categorize code hallucinations into four main types: mapping, naming, resource, and logic hallucinations, each further divided into different subcategories to better understand and address the unique challenges faced by LLMs during code generation. To systematically evaluate code hallucinations, we propose a dynamic detection algorithm for code hallucinations and construct the CodeHalu benchmark, which includes 8,883 samples from 699 tasks, to actively detect hallucination phenomena in LLMs during programming. We tested 16 popular LLMs on this benchmark to evaluate the frequency and nature of their hallucinations during code generation. The findings reveal significant variations in the accuracy and reliability of LLMs in generating code, highlighting the urgent need to improve models and training methods to ensure the functional correctness and safety of automatically generated code. This study not only classifies and quantifies code hallucinations but also provides insights for future improvements in LLM-based code generation research. The CodeHalu benchmark and code are publicly available at https://github.com/yuchen814/CodeHalu.

There is burgeoning interest in designing AI-based systems to assist humans in designing computing systems, including tools that automatically generate computer code. The most notable of these comes in the form of the first self-described `AI pair programmer', GitHub Copilot, a language model trained over open-source GitHub code. However, code often contains bugs - and so, given the vast quantity of unvetted code that Copilot has processed, it is certain that the language model will have learned from exploitable, buggy code. This raises concerns on the security of Copilot's code contributions. In this work, we systematically investigate the prevalence and conditions that can cause GitHub Copilot to recommend insecure code. To perform this analysis we prompt Copilot to generate code in scenarios relevant to high-risk CWEs (e.g. those from MITRE's "Top 25" list). We explore Copilot's performance on three distinct code generation axes -- examining how it performs given diversity of weaknesses, diversity of prompts, and diversity of domains. In total, we produce 89 different scenarios for Copilot to complete, producing 1,689 programs. Of these, we found approximately 40% to be vulnerable.