gnn-ruby-code-study / experiments /gnn_generation_analysis.yaml
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# Fleet Spec: GNN Code Generation Failure Analysis (Track 2)
#
# Systematic analysis of code generation quality across decoder configurations.
# Tests: loss functions × decoder architectures × hidden dimensions.
#
# Launch:
# ratiocinator fleet run experiments/gnn_generation_analysis.yaml
name: gnn-generation-analysis
description: "Systematic GNN code generation failure analysis"
hardware:
gpu: "RTX 4090"
num_gpus: 1
min_cpu_ram_gb: 32
min_inet_down: 1000.0
min_cuda_version: 12.0
max_dph: 0.40
disk_gb: 50.0
image: pytorch/pytorch:2.7.0-cuda12.8-cudnn9-runtime
repo:
url: https://github.com/timlawrenz/jubilant-palm-tree.git
branch: experiment/ratiocinator-gnn-study
clone_depth: 1
data:
source: none
deps:
pre_install:
- "apt-get update -qq && apt-get install -y -qq git-lfs > /dev/null 2>&1 || true"
- "cd /workspace/experiment && git lfs install && git lfs pull"
- "pip install torch-geometric torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-2.7.0+cu128.html"
- "pip install pandas tqdm sentence-transformers nltk scikit-learn numpy"
requirements: requirements.txt
exclude_from_requirements:
- torch
- torchvision
- torch_geometric
verify: "python -c \"import torch_geometric; print(f'PyG {torch_geometric.__version__}')\""
arms:
# ── Loss function comparison (GAT decoder baseline) ──
- name: improved-loss-gat
description: "Improved (cross-entropy) loss, GAT decoder"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "GAT"
LOSS_FN: "improved"
HIDDEN_DIM: "256"
NUM_LAYERS: "5"
EPOCHS: "30"
- name: simple-loss-gat
description: "Simple (MSE) loss, GAT decoder"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "GAT"
LOSS_FN: "simple"
HIDDEN_DIM: "256"
NUM_LAYERS: "5"
EPOCHS: "30"
- name: comprehensive-loss-gat
description: "Comprehensive (combined) loss, GAT decoder"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "GAT"
LOSS_FN: "comprehensive"
HIDDEN_DIM: "256"
NUM_LAYERS: "5"
EPOCHS: "30"
# ── Decoder architecture comparison (improved loss) ──
- name: improved-loss-sage
description: "Improved loss, SAGE decoder"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "SAGE"
LOSS_FN: "improved"
HIDDEN_DIM: "256"
NUM_LAYERS: "5"
EPOCHS: "30"
- name: improved-loss-gin
description: "Improved loss, GIN decoder"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "GIN"
LOSS_FN: "improved"
HIDDEN_DIM: "256"
NUM_LAYERS: "5"
EPOCHS: "30"
- name: improved-loss-gcn
description: "Improved loss, GCN decoder"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "GCN"
LOSS_FN: "improved"
HIDDEN_DIM: "256"
NUM_LAYERS: "5"
EPOCHS: "30"
# ── Wider decoder ──
- name: improved-loss-gat-wide
description: "Improved loss, GAT decoder, hidden_dim=512"
command: "bash scripts/run_generation_arm.sh"
env:
DECODER_CONV_TYPE: "GAT"
LOSS_FN: "improved"
HIDDEN_DIM: "512"
NUM_LAYERS: "5"
EPOCHS: "30"
metrics:
protocol: json_line
json_prefix: "METRICS:"
budget:
max_dollars: 10.00
train_timeout_s: 3600
download_timeout_s: 600