technion: sync data cards and figures with GitHub
Browse filesSyncs the three technion cards and figures on the Hub with the reviewed state on GitHub (open-h/OpenH-RF).
Adds the figures each card shows: a reference B-mode for bladder, cardiac and phantom, plus cine loops for bladder and cardiac. None were on the Hub, so those images were broken here. Each card also gains the `zea process` one-liner that reproduces its figure straight from the Hub.
Files changed: 8.
```
+ technion/bladder/assets/bmode.png
+ technion/bladder/assets/cine.gif
+ technion/cardiac/assets/bmode.png
+ technion/cardiac/assets/cine.gif
+ technion/phantom/assets/bmode.png
~ technion/bladder/README.md
~ technion/cardiac/README.md
~ technion/phantom/README.md
```
technion/bladder/README.md
CHANGED
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@@ -18,6 +18,20 @@ size_categories:
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# OpenH-RF — Bladder pre-beamformed RF channel data
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## Dataset Description
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Real, **in-vivo human** pre-beamformed ultrasound **channel data** for bladder
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`reconstruct.py` reconstructs a B-mode from `raw_data` using the `zea.Pipeline`
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defined in `pipeline.yaml`: delay-and-sum beamforming on a polar scanline grid
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(one image line per transmit, receive dynamic focusing
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detection → normalization → log compression → sector scan conversion. Run it on
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any file to reproduce a reference frame:
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```
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python reconstruct.py
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```
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Reference output: `
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reproduces the expected sector
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## Known Issues
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# OpenH-RF — Bladder pre-beamformed RF channel data
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+

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Transverse suprapubic view: one cine loop (10 frames) from [`data/a1.hdf5`](https://huggingface.co/datasets/nvidia/OpenH-RF/blob/main/technion/bladder/data/a1.hdf5).
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`zea` renders it straight from the Hub with the
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`pipeline.yaml` in this folder. Try it out with the following command:
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```bash
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zea process \
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--dataset hf://nvidia/OpenH-RF/technion/bladder/data/a1.hdf5 \
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--config hf://nvidia/OpenH-RF/technion/bladder/pipeline.yaml \
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--n-frames 10
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```
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## Dataset Description
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Real, **in-vivo human** pre-beamformed ultrasound **channel data** for bladder
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`reconstruct.py` reconstructs a B-mode from `raw_data` using the `zea.Pipeline`
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defined in `pipeline.yaml`: delay-and-sum beamforming on a polar scanline grid
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(one image line per transmit, receive dynamic focusing) → envelope
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detection → normalization → log compression → sector scan conversion. Run it on
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any file to reproduce a reference frame:
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```
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python reconstruct.py
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```
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Reference output: `bmode.png` — frame 30 of `data/a1.hdf5` (in `assets/`). The
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pipeline matches the acquisition's own receive-beamforming geometry
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(`code/processing/`), so the reconstruction reproduces the expected sector
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B-mode.
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## Known Issues
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technion/bladder/assets/bmode.png
ADDED
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Git LFS Details
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technion/bladder/assets/cine.gif
ADDED
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Git LFS Details
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technion/cardiac/README.md
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# OpenH-RF — Cardiac pre-beamformed RF channel data (paired with DAS targets)
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## Dataset Description
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Real, **in-vivo human** pre-beamformed ultrasound **channel data** for cardiac
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normalization → log compression → sector scan conversion. Run:
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```
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python reconstruct.py
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```
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Reference output: `
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delay-and-sum reconstruction in
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learning task) — note its depth
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rate is not stored (see Known
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## Known Issues
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# OpenH-RF — Cardiac pre-beamformed RF channel data (paired with DAS targets)
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+

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Apical four-chamber view: one cine loop (32 frames) from [`data/c1.hdf5`](https://huggingface.co/datasets/nvidia/OpenH-RF/blob/main/technion/cardiac/data/c1.hdf5).
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`zea` renders it straight from the Hub with the
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`pipeline.yaml` in this folder. Try it out with the following command:
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```bash
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zea process \
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--dataset hf://nvidia/OpenH-RF/technion/cardiac/data/c1.hdf5 \
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--config hf://nvidia/OpenH-RF/technion/cardiac/pipeline.yaml \
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--n-frames 32
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```
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## Dataset Description
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Real, **in-vivo human** pre-beamformed ultrasound **channel data** for cardiac
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normalization → log compression → sector scan conversion. Run:
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```
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python reconstruct.py
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```
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Reference output: `bmode.png` — frame 8 of `data/c1.hdf5` (in `assets/`). Each
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frame is also paired with its conventional delay-and-sum reconstruction in
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`beamformed_data` (the target for the raw→image learning task) — note its depth
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scale is approximate because the acquisition axial rate is not stored (see Known
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Issues).
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## Known Issues
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technion/cardiac/assets/bmode.png
ADDED
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Git LFS Details
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technion/cardiac/assets/cine.gif
ADDED
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Git LFS Details
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technion/phantom/README.md
CHANGED
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@@ -18,6 +18,21 @@ size_categories:
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# OpenH-RF — Tissue-mimicking phantom pre-beamformed RF channel data
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## Dataset Description
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Pre-beamformed ultrasound **channel data** from a tissue-mimicking phantom,
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normalization → log compression → sector scan conversion). Run:
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```
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python reconstruct.py
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```
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Reference output: `
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anechoic cyst at ~65 mm.
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## Known Issues
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# OpenH-RF — Tissue-mimicking phantom pre-beamformed RF channel data
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+

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Frame 6 of [`data/ph.hdf5`](https://huggingface.co/datasets/nvidia/OpenH-RF/blob/main/technion/phantom/data/ph.hdf5), reconstructed by
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`reconstruct.py`.
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`zea` renders it straight from the Hub with the
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`pipeline.yaml` in this folder. Try it out with the following command:
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```bash
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zea process \
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--dataset hf://nvidia/OpenH-RF/technion/phantom/data/ph.hdf5 \
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--config hf://nvidia/OpenH-RF/technion/phantom/pipeline.yaml \
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--n-frames 1
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```
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+
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## Dataset Description
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Pre-beamformed ultrasound **channel data** from a tissue-mimicking phantom,
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normalization → log compression → sector scan conversion). Run:
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```
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python reconstruct.py
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```
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Reference output: `bmode.png` — frame 6 of `data/ph.hdf5`, shown above:
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resolvable point targets and a well-defined anechoic cyst at ~65 mm.
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## Known Issues
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technion/phantom/assets/bmode.png
ADDED
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Git LFS Details
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