#!/usr/bin/env python3 """ tokenize_for_training.py — Tokenize and chunk ir_dataset.parquet into a HuggingFace dataset ready for continued_pretrain.py. Pipeline position: AFTER build_ir_dataset.py, BEFORE continued_pretrain.py Input ----- Parquet file produced by build_ir_dataset.py with columns: source_code, llvm_ir, language, ir_type, source_dataset, est_tokens Processing ---------- 1. Assemble one text string per record: sltrans → \\n{code}\\n\\n\\n{ir}\\n stack_llvm → {llvm_ir} (unpaired IR, no source) others → {source_code} (peS2o, TheStack, OpenWebMath) 2. Tokenize each string without truncation, append an EOS token as a document separator. 3. Concatenate all token sequences into one stream, split into fixed-length blocks of --block-size tokens. 4. Emit records with input_ids / attention_mask / labels columns. labels == input_ids (the Trainer shifts internally for causal LM loss). Output ------ Arrow dataset saved with save_to_disk(), optionally pushed to the Hub. Load locally: datasets.load_from_disk("./tokenized_dataset") Load from Hub: datasets.load_dataset("your-org/your-dataset") NOTE: continued_pretrain.py uses load_dataset(...), so either push to Hub or replace that call with load_from_disk() for a purely local workflow. Usage ----- python tokenize_for_training.py \\ --input ir_dataset.parquet \\ --model bigcode/starcoderbase-1b \\ --output ./tokenized_dataset python tokenize_for_training.py \\ --input ir_dataset.parquet \\ --model codellama/CodeLlama-7b-hf \\ --output ./tokenized_dataset \\ --validation-split 0.05 \\ --push-to-hub your-org/dataset-name \\ --token YOUR_HF_TOKEN """ from __future__ import annotations import argparse import sys from pathlib import Path from itertools import chain from datasets import Dataset, DatasetDict from transformers import AutoTokenizer # Special tokens the IRCoder paper adds to every model's vocabulary. _IR_SPECIAL_TOKENS = ["", ""] _PAD_TOKEN = "<|pad|>" # Records per batch during the group_texts step. Larger batches waste fewer # tokens at chunk boundaries. _GROUP_BATCH_SIZE = 5_000 # ── tokenizer setup ──────────────────────────────────────────────────────────── def build_tokenizer(model_name: str, block_size: int | None, token: str | None) -> AutoTokenizer: """Load tokenizer and register the IRCoder special tokens.""" tok = AutoTokenizer.from_pretrained( model_name, padding_side="left", truncation_side="right", trust_remote_code=True, token=token, ) tokens_to_add: dict = {} if tok.pad_token is None: tokens_to_add["pad_token"] = _PAD_TOKEN extra = [t for t in _IR_SPECIAL_TOKENS if t not in tok.get_vocab()] existing_extra = list(tok.extra_special_tokens or []) new_extra = [t for t in extra if t not in existing_extra] if new_extra: tokens_to_add["additional_special_tokens"] = existing_extra + new_extra if tokens_to_add: tok.add_special_tokens(tokens_to_add) if block_size is not None: tok.model_max_length = block_size elif tok.model_max_length > 1_000_000: # HuggingFace sets model_max_length to a huge sentinel when the tokenizer # config doesn't specify a context length. Fall back to the value used by # the IRCoder paper for all StarCoder/DeepSeek/CodeLlama models. tok.model_max_length = 4096 print(f" WARNING: tokenizer did not report a context length; defaulting " f"to {tok.model_max_length}. Pass --block-size to override.") return tok # ── text assembly ────────────────────────────────────────────────────────────── def _assemble_text_batch(batch: dict) -> dict: """Derive a single 'text' string for each record.""" texts: list[str | None] = [] for src, ir, source in zip( batch["source_code"], batch["llvm_ir"], batch["source_dataset"] ): if source == "sltrans": if src and ir: texts.append( f"\n{src}\n\n\n{ir}\n" ) else: texts.append(None) elif source == "stack_llvm": texts.append(str(ir) if ir else None) else: texts.append(str(src) if src else None) return {"text": texts} def _is_valid(example: dict) -> bool: t = example["text"] return t is not None and t != "" # ── tokenisation ─────────────────────────────────────────────────────────────── def _tokenize_batch(batch: dict, tokenizer: AutoTokenizer) -> dict: """Tokenize text without truncation; append EOS as a document separator.""" eos = tokenizer.eos_token_id if eos is None: raise ValueError( f"Tokenizer for {tokenizer.name_or_path!r} has no eos_token_id. " "Set one explicitly before running this script." ) encoded = tokenizer( batch["text"], add_special_tokens=False, truncation=False, padding=False, ) return { "input_ids": [ids + [eos] for ids in encoded["input_ids"]], "attention_mask": [am + [1] for am in encoded["attention_mask"]], } # ── chunking ─────────────────────────────────────────────────────────────────── def _group_texts(batch: dict, block_size: int) -> dict: """Concatenate token sequences and split into fixed-length blocks.""" all_ids = list(chain.from_iterable(batch["input_ids"])) total = (len(all_ids) // block_size) * block_size if total == 0: return {"input_ids": [], "attention_mask": [], "labels": []} num_blocks = total // block_size ids_list = [all_ids[i : i + block_size] for i in range(0, total, block_size)] am_row = [1] * block_size return { "input_ids": ids_list, "attention_mask": [am_row] * num_blocks, "labels": ids_list, } # ── main ─────────────────────────────────────────────────────────────────────── def main() -> None: ap = argparse.ArgumentParser( description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter, ) ap.add_argument( "--input", default="ir_dataset.parquet", help="Parquet file from build_ir_dataset.py (default: ir_dataset.parquet)", ) ap.add_argument( "--model", required=True, help="HuggingFace model name — selects the tokenizer " "(e.g. bigcode/starcoderbase-1b)", ) ap.add_argument( "--output", default="./tokenized_dataset", help="Directory for the Arrow dataset (default: ./tokenized_dataset)", ) ap.add_argument( "--block-size", type=int, default=None, help="Token block length. Defaults to the tokenizer's model_max_length " "(4096 for StarCoder/DeepSeek/CodeLlama, 2048 for CodeGen).", ) ap.add_argument( "--num-workers", type=int, default=1, help="Parallel workers for dataset.map (default: 1). " "Increase on Linux; keep at 1 on Windows to avoid spawn issues.", ) ap.add_argument( "--validation-split", type=float, default=0.0, help="Fraction of blocks to hold out as validation (default: 0 = no split). " "The training script can also split at runtime via " "--validation_split_percentage.", ) ap.add_argument( "--push-to-hub", default=None, metavar="HUB_DATASET_ID", help="Push the finished dataset to the Hub (e.g. your-org/dataset-name).", ) ap.add_argument( "--token", default=None, help="HuggingFace token (required for gated models and Hub push).", ) args = ap.parse_args() in_path = Path(args.input) if not in_path.exists(): print(f"ERROR: input file not found: {in_path}", file=sys.stderr) sys.exit(1) # ── tokenizer ───────────────────────────────────────────────────────────── print(f"Model / tokenizer : {args.model}") tokenizer = build_tokenizer(args.model, args.block_size, args.token) block_size = tokenizer.model_max_length print(f"Block size : {block_size} tokens") print(f"Vocab size (final) : {len(tokenizer)}") print(f"EOS token : {tokenizer.eos_token!r} (id={tokenizer.eos_token_id})") print() # ── load ────────────────────────────────────────────────────────────────── print(f"[1/4] Loading {in_path.resolve()} ...") ds: Dataset = Dataset.from_parquet(str(in_path)) print(f" {len(ds):,} records loaded") # ── assemble text ───────────────────────────────────────────────────────── print("\n[2/4] Assembling text column ...") ds = ds.map( _assemble_text_batch, batched=True, num_proc=args.num_workers, remove_columns=ds.column_names, desc="assemble", ) before = len(ds) ds = ds.filter(_is_valid, num_proc=args.num_workers, desc="filter-empty") dropped = before - len(ds) print(f" {len(ds):,} records with text ({dropped:,} dropped — empty/null fields)") # ── tokenize ────────────────────────────────────────────────────────────── print("\n[3/4] Tokenizing (no truncation, EOS appended) ...") ds = ds.map( _tokenize_batch, fn_kwargs={"tokenizer": tokenizer}, batched=True, batch_size=1_000, writer_batch_size=500, num_proc=args.num_workers, remove_columns=["text"], desc="tokenize", ) # ── chunk ───────────────────────────────────────────────────────────────── print(f"\n[4/4] Chunking into {block_size}-token blocks ...") ds = ds.map( _group_texts, fn_kwargs={"block_size": block_size}, batched=True, batch_size=_GROUP_BATCH_SIZE, num_proc=args.num_workers, desc="chunk", ) total_tokens = len(ds) * block_size print(f" {len(ds):,} blocks ({total_tokens:,} tokens)") if len(ds) == 0: print("ERROR: chunking produced 0 blocks. Check that --block-size is set " "correctly and that the input dataset is non-empty.", file=sys.stderr) sys.exit(1) if "labels" not in ds.column_names: ds = ds.add_column("labels", ds["input_ids"]) # ── optional validation split ───────────────────────────────────────────── out_ds: Dataset | DatasetDict if args.validation_split > 0.0: split = ds.train_test_split( test_size=args.validation_split, seed=42, shuffle=True ) out_ds = DatasetDict({"train": split["train"], "validation": split["test"]}) print( f"\n train : {len(split['train']):,} blocks" f"\n validation : {len(split['test']):,} blocks" ) else: out_ds = ds # ── save ────────────────────────────────────────────────────────────────── out_dir = Path(args.output) out_dir.mkdir(parents=True, exist_ok=True) print(f"\nSaving parquet to {out_dir.resolve()} ...") splits: dict[str, Dataset] = ( dict(out_ds.items()) if isinstance(out_ds, DatasetDict) else {"train": out_ds} ) for split_name, split_ds in splits.items(): dest = out_dir / f"{split_name}.parquet" split_ds.to_parquet(str(dest)) print(f" Wrote {dest.name} ({len(split_ds):,} blocks)") if args.push_to_hub: print(f"\nPushing to Hub: {args.push_to_hub} ...") out_ds.push_to_hub(args.push_to_hub, token=args.token) print("Pushed.") # ── summary ─────────────────────────────────────────────────────────────── print() print("=" * 60) print("TOKENIZATION COMPLETE") print("=" * 60) for split_name, split_ds in splits.items(): print( f" {split_name:<12} {len(split_ds):>10,} blocks" f" ({len(split_ds) * block_size:,} tokens)" ) schema_ds = next(iter(splits.values())) print(f"\nDataset schema : {list(schema_ds.column_names)}") print(f"Output : {out_dir.resolve()}") if args.push_to_hub: print(f"Hub : {args.push_to_hub}") print() print("Pass to continued_pretrain.py with:") print(f" --dataset_name {str(out_dir.resolve())!r}") if __name__ == "__main__": main()