| | |
| |
|
| | #ifndef MPL_NUMPY_CPP_H |
| | #define MPL_NUMPY_CPP_H |
| | #define PY_SSIZE_T_CLEAN |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| |
|
| | #include "py_exceptions.h" |
| |
|
| | #include <complex> |
| |
|
| | #ifdef _POSIX_C_SOURCE |
| | # undef _POSIX_C_SOURCE |
| | #endif |
| | #ifndef _AIX |
| | #ifdef _XOPEN_SOURCE |
| | # undef _XOPEN_SOURCE |
| | #endif |
| | #endif |
| |
|
| | |
| | #if defined(__sun) || defined(sun) |
| | #if defined(_XPG4) |
| | #undef _XPG4 |
| | #endif |
| | #if defined(_XPG3) |
| | #undef _XPG3 |
| | #endif |
| | #endif |
| |
|
| | #include <Python.h> |
| | #include <numpy/ndarrayobject.h> |
| |
|
| | namespace numpy |
| | { |
| |
|
| | |
| | template <typename T> |
| | struct type_num_of; |
| |
|
| | |
| | |
| | |
| | |
| | |
| | template <> struct type_num_of<bool> |
| | { |
| | enum { |
| | value = NPY_BOOL |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_byte> |
| | { |
| | enum { |
| | value = NPY_BYTE |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_ubyte> |
| | { |
| | enum { |
| | value = NPY_UBYTE |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_short> |
| | { |
| | enum { |
| | value = NPY_SHORT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_ushort> |
| | { |
| | enum { |
| | value = NPY_USHORT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_int> |
| | { |
| | enum { |
| | value = NPY_INT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_uint> |
| | { |
| | enum { |
| | value = NPY_UINT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_long> |
| | { |
| | enum { |
| | value = NPY_LONG |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_ulong> |
| | { |
| | enum { |
| | value = NPY_ULONG |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_longlong> |
| | { |
| | enum { |
| | value = NPY_LONGLONG |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_ulonglong> |
| | { |
| | enum { |
| | value = NPY_ULONGLONG |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_float> |
| | { |
| | enum { |
| | value = NPY_FLOAT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_double> |
| | { |
| | enum { |
| | value = NPY_DOUBLE |
| | }; |
| | }; |
| | #if NPY_LONGDOUBLE != NPY_DOUBLE |
| | template <> |
| | struct type_num_of<npy_longdouble> |
| | { |
| | enum { |
| | value = NPY_LONGDOUBLE |
| | }; |
| | }; |
| | #endif |
| | template <> |
| | struct type_num_of<npy_cfloat> |
| | { |
| | enum { |
| | value = NPY_CFLOAT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<std::complex<npy_float> > |
| | { |
| | enum { |
| | value = NPY_CFLOAT |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<npy_cdouble> |
| | { |
| | enum { |
| | value = NPY_CDOUBLE |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<std::complex<npy_double> > |
| | { |
| | enum { |
| | value = NPY_CDOUBLE |
| | }; |
| | }; |
| | #if NPY_CLONGDOUBLE != NPY_CDOUBLE |
| | template <> |
| | struct type_num_of<npy_clongdouble> |
| | { |
| | enum { |
| | value = NPY_CLONGDOUBLE |
| | }; |
| | }; |
| | template <> |
| | struct type_num_of<std::complex<npy_longdouble> > |
| | { |
| | enum { |
| | value = NPY_CLONGDOUBLE |
| | }; |
| | }; |
| | #endif |
| | template <> |
| | struct type_num_of<PyObject *> |
| | { |
| | enum { |
| | value = NPY_OBJECT |
| | }; |
| | }; |
| | template <typename T> |
| | struct type_num_of<T &> |
| | { |
| | enum { |
| | value = type_num_of<T>::value |
| | }; |
| | }; |
| | template <typename T> |
| | struct type_num_of<const T> |
| | { |
| | enum { |
| | value = type_num_of<T>::value |
| | }; |
| | }; |
| |
|
| | template <typename T> |
| | struct is_const |
| | { |
| | enum { |
| | value = false |
| | }; |
| | }; |
| | template <typename T> |
| | struct is_const<const T> |
| | { |
| | enum { |
| | value = true |
| | }; |
| | }; |
| |
|
| | namespace detail |
| | { |
| | template <template <typename, int> class AV, typename T, int ND> |
| | class array_view_accessors; |
| |
|
| | template <template <typename, int> class AV, typename T> |
| | class array_view_accessors<AV, T, 1> |
| | { |
| | public: |
| | typedef AV<T, 1> AVC; |
| | typedef T sub_t; |
| |
|
| | T &operator()(npy_intp i) |
| | { |
| | AVC *self = static_cast<AVC *>(this); |
| |
|
| | return *reinterpret_cast<T *>(self->m_data + self->m_strides[0] * i); |
| | } |
| |
|
| | const T &operator()(npy_intp i) const |
| | { |
| | const AVC *self = static_cast<const AVC *>(this); |
| |
|
| | return *reinterpret_cast<const T *>(self->m_data + self->m_strides[0] * i); |
| | } |
| |
|
| | T &operator[](npy_intp i) |
| | { |
| | AVC *self = static_cast<AVC *>(this); |
| |
|
| | return *reinterpret_cast<T *>(self->m_data + self->m_strides[0] * i); |
| | } |
| |
|
| | const T &operator[](npy_intp i) const |
| | { |
| | const AVC *self = static_cast<const AVC *>(this); |
| |
|
| | return *reinterpret_cast<const T *>(self->m_data + self->m_strides[0] * i); |
| | } |
| | }; |
| |
|
| | template <template <typename, int> class AV, typename T> |
| | class array_view_accessors<AV, T, 2> |
| | { |
| | public: |
| | typedef AV<T, 2> AVC; |
| | typedef AV<T, 1> sub_t; |
| |
|
| | T &operator()(npy_intp i, npy_intp j) |
| | { |
| | AVC *self = static_cast<AVC *>(this); |
| |
|
| | return *reinterpret_cast<T *>(self->m_data + self->m_strides[0] * i + |
| | self->m_strides[1] * j); |
| | } |
| |
|
| | const T &operator()(npy_intp i, npy_intp j) const |
| | { |
| | const AVC *self = static_cast<const AVC *>(this); |
| |
|
| | return *reinterpret_cast<const T *>(self->m_data + self->m_strides[0] * i + |
| | self->m_strides[1] * j); |
| | } |
| |
|
| | sub_t subarray(npy_intp i) const |
| | { |
| | const AVC *self = static_cast<const AVC *>(this); |
| |
|
| | return sub_t(self->m_arr, |
| | self->m_data + self->m_strides[0] * i, |
| | self->m_shape + 1, |
| | self->m_strides + 1); |
| | } |
| | }; |
| |
|
| | template <template <typename, int> class AV, typename T> |
| | class array_view_accessors<AV, T, 3> |
| | { |
| | public: |
| | typedef AV<T, 3> AVC; |
| | typedef AV<T, 2> sub_t; |
| |
|
| | T &operator()(npy_intp i, npy_intp j, npy_intp k) |
| | { |
| | AVC *self = static_cast<AVC *>(this); |
| |
|
| | return *reinterpret_cast<T *>(self->m_data + self->m_strides[0] * i + |
| | self->m_strides[1] * j + self->m_strides[2] * k); |
| | } |
| |
|
| | const T &operator()(npy_intp i, npy_intp j, npy_intp k) const |
| | { |
| | const AVC *self = static_cast<const AVC *>(this); |
| |
|
| | return *reinterpret_cast<const T *>(self->m_data + self->m_strides[0] * i + |
| | self->m_strides[1] * j + self->m_strides[2] * k); |
| | } |
| |
|
| | sub_t subarray(npy_intp i) const |
| | { |
| | const AVC *self = static_cast<const AVC *>(this); |
| |
|
| | return sub_t(self->m_arr, |
| | self->m_data + self->m_strides[0] * i, |
| | self->m_shape + 1, |
| | self->m_strides + 1); |
| | } |
| |
|
| |
|
| | }; |
| |
|
| | |
| | |
| |
|
| | } |
| |
|
| | static npy_intp zeros[] = { 0, 0, 0 }; |
| |
|
| | template <typename T, int ND> |
| | class array_view : public detail::array_view_accessors<array_view, T, ND> |
| | { |
| | friend class detail::array_view_accessors<numpy::array_view, T, ND>; |
| |
|
| | private: |
| | |
| | PyArrayObject *m_arr; |
| | npy_intp *m_shape; |
| | npy_intp *m_strides; |
| | char *m_data; |
| |
|
| | public: |
| | typedef T value_type; |
| |
|
| | enum { |
| | ndim = ND |
| | }; |
| |
|
| | array_view() : m_arr(NULL), m_data(NULL) |
| | { |
| | m_shape = zeros; |
| | m_strides = zeros; |
| | } |
| |
|
| | array_view(PyObject *arr, bool contiguous = false) : m_arr(NULL), m_data(NULL) |
| | { |
| | if (!set(arr, contiguous)) { |
| | throw py::exception(); |
| | } |
| | } |
| |
|
| | array_view(const array_view &other) : m_arr(NULL), m_data(NULL) |
| | { |
| | m_arr = other.m_arr; |
| | Py_XINCREF(m_arr); |
| | m_data = other.m_data; |
| | m_shape = other.m_shape; |
| | m_strides = other.m_strides; |
| | } |
| |
|
| | array_view(PyArrayObject *arr, char *data, npy_intp *shape, npy_intp *strides) |
| | { |
| | m_arr = arr; |
| | Py_XINCREF(arr); |
| | m_data = data; |
| | m_shape = shape; |
| | m_strides = strides; |
| | } |
| |
|
| | array_view(PyArrayObject *arr) |
| | { |
| | m_arr = arr; |
| | Py_XINCREF(arr); |
| | m_shape = PyArray_DIMS(m_arr); |
| | m_strides = PyArray_STRIDES(m_arr); |
| | m_data = PyArray_BYTES(m_arr); |
| | } |
| |
|
| | array_view(npy_intp shape[ND]) : m_arr(NULL), m_shape(NULL), m_strides(NULL), m_data(NULL) |
| | { |
| | PyObject *arr = PyArray_SimpleNew(ND, shape, type_num_of<T>::value); |
| | if (arr == NULL) { |
| | throw py::exception(); |
| | } |
| | if (!set(arr, true)) { |
| | Py_DECREF(arr); |
| | throw py::exception(); |
| | } |
| | Py_DECREF(arr); |
| | } |
| |
|
| | ~array_view() |
| | { |
| | Py_XDECREF(m_arr); |
| | } |
| |
|
| | array_view& operator=(const array_view &other) |
| | { |
| | if (this != &other) |
| | { |
| | Py_XDECREF(m_arr); |
| | m_arr = other.m_arr; |
| | Py_XINCREF(m_arr); |
| | m_data = other.m_data; |
| | m_shape = other.m_shape; |
| | m_strides = other.m_strides; |
| | } |
| | return *this; |
| | } |
| |
|
| | bool set(PyObject *arr, bool contiguous = false) |
| | { |
| | PyArrayObject *tmp; |
| |
|
| | if (arr == NULL || arr == Py_None) { |
| | Py_XDECREF(m_arr); |
| | m_arr = NULL; |
| | m_data = NULL; |
| | m_shape = zeros; |
| | m_strides = zeros; |
| | } else { |
| | if (contiguous) { |
| | tmp = (PyArrayObject *)PyArray_ContiguousFromAny(arr, type_num_of<T>::value, 0, ND); |
| | } else { |
| | tmp = (PyArrayObject *)PyArray_FromObject(arr, type_num_of<T>::value, 0, ND); |
| | } |
| | if (tmp == NULL) { |
| | return false; |
| | } |
| |
|
| | if (PyArray_NDIM(tmp) == 0 || PyArray_DIM(tmp, 0) == 0) { |
| | Py_XDECREF(m_arr); |
| | m_arr = NULL; |
| | m_data = NULL; |
| | m_shape = zeros; |
| | m_strides = zeros; |
| | if (PyArray_NDIM(tmp) == 0 && ND == 0) { |
| | m_arr = tmp; |
| | return true; |
| | } |
| | } |
| | if (PyArray_NDIM(tmp) != ND) { |
| | PyErr_Format(PyExc_ValueError, |
| | "Expected %d-dimensional array, got %d", |
| | ND, |
| | PyArray_NDIM(tmp)); |
| | Py_DECREF(tmp); |
| | return false; |
| | } |
| |
|
| | |
| | Py_XDECREF(m_arr); |
| | m_arr = tmp; |
| | m_shape = PyArray_DIMS(m_arr); |
| | m_strides = PyArray_STRIDES(m_arr); |
| | m_data = PyArray_BYTES(tmp); |
| | } |
| |
|
| | return true; |
| | } |
| |
|
| | npy_intp dim(size_t i) const |
| | { |
| | if (i >= ND) { |
| | return 0; |
| | } |
| | return m_shape[i]; |
| | } |
| |
|
| | |
| | |
| | |
| | |
| | size_t size() const |
| | { |
| | bool empty = (ND == 0); |
| | for (size_t i = 0; i < ND; i++) { |
| | if (m_shape[i] == 0) { |
| | empty = true; |
| | } |
| | } |
| | if (empty) { |
| | return 0; |
| | } else { |
| | return (size_t)dim(0); |
| | } |
| | } |
| |
|
| | bool empty() const |
| | { |
| | return size() == 0; |
| | } |
| |
|
| | |
| | const T *data() const |
| | { |
| | return (const T *)m_data; |
| | } |
| |
|
| | |
| | T *data() |
| | { |
| | return (T *)m_data; |
| | } |
| |
|
| | |
| | PyObject *pyobj() |
| | { |
| | Py_XINCREF(m_arr); |
| | return (PyObject *)m_arr; |
| | } |
| |
|
| | |
| | PyObject *pyobj_steal() |
| | { |
| | return (PyObject *)m_arr; |
| | } |
| |
|
| | static int converter(PyObject *obj, void *arrp) |
| | { |
| | array_view<T, ND> *arr = (array_view<T, ND> *)arrp; |
| |
|
| | if (!arr->set(obj)) { |
| | return 0; |
| | } |
| |
|
| | return 1; |
| | } |
| |
|
| | static int converter_contiguous(PyObject *obj, void *arrp) |
| | { |
| | array_view<T, ND> *arr = (array_view<T, ND> *)arrp; |
| |
|
| | if (!arr->set(obj, true)) { |
| | return 0; |
| | } |
| |
|
| | return 1; |
| | } |
| | }; |
| |
|
| | } |
| |
|
| |
|
| | #endif |
| |
|