| | """ |
| | =================== |
| | Packed-bubble chart |
| | =================== |
| | |
| | Create a packed-bubble chart to represent scalar data. |
| | The presented algorithm tries to move all bubbles as close to the center of |
| | mass as possible while avoiding some collisions by moving around colliding |
| | objects. In this example we plot the market share of different desktop |
| | browsers. |
| | (source: https://gs.statcounter.com/browser-market-share/desktop/worldwidev) |
| | """ |
| |
|
| | import matplotlib.pyplot as plt |
| | import numpy as np |
| |
|
| | browser_market_share = { |
| | 'browsers': ['firefox', 'chrome', 'safari', 'edge', 'ie', 'opera'], |
| | 'market_share': [8.61, 69.55, 8.36, 4.12, 2.76, 2.43], |
| | 'color': ['#5A69AF', '#579E65', '#F9C784', '#FC944A', '#F24C00', '#00B825'] |
| | } |
| |
|
| |
|
| | class BubbleChart: |
| | def __init__(self, area, bubble_spacing=0): |
| | """ |
| | Setup for bubble collapse. |
| | |
| | Parameters |
| | ---------- |
| | area : array-like |
| | Area of the bubbles. |
| | bubble_spacing : float, default: 0 |
| | Minimal spacing between bubbles after collapsing. |
| | |
| | Notes |
| | ----- |
| | If "area" is sorted, the results might look weird. |
| | """ |
| | area = np.asarray(area) |
| | r = np.sqrt(area / np.pi) |
| |
|
| | self.bubble_spacing = bubble_spacing |
| | self.bubbles = np.ones((len(area), 4)) |
| | self.bubbles[:, 2] = r |
| | self.bubbles[:, 3] = area |
| | self.maxstep = 2 * self.bubbles[:, 2].max() + self.bubble_spacing |
| | self.step_dist = self.maxstep / 2 |
| |
|
| | |
| | length = np.ceil(np.sqrt(len(self.bubbles))) |
| | grid = np.arange(length) * self.maxstep |
| | gx, gy = np.meshgrid(grid, grid) |
| | self.bubbles[:, 0] = gx.flatten()[:len(self.bubbles)] |
| | self.bubbles[:, 1] = gy.flatten()[:len(self.bubbles)] |
| |
|
| | self.com = self.center_of_mass() |
| |
|
| | def center_of_mass(self): |
| | return np.average( |
| | self.bubbles[:, :2], axis=0, weights=self.bubbles[:, 3] |
| | ) |
| |
|
| | def center_distance(self, bubble, bubbles): |
| | return np.hypot(bubble[0] - bubbles[:, 0], |
| | bubble[1] - bubbles[:, 1]) |
| |
|
| | def outline_distance(self, bubble, bubbles): |
| | center_distance = self.center_distance(bubble, bubbles) |
| | return center_distance - bubble[2] - \ |
| | bubbles[:, 2] - self.bubble_spacing |
| |
|
| | def check_collisions(self, bubble, bubbles): |
| | distance = self.outline_distance(bubble, bubbles) |
| | return len(distance[distance < 0]) |
| |
|
| | def collides_with(self, bubble, bubbles): |
| | distance = self.outline_distance(bubble, bubbles) |
| | return np.argmin(distance, keepdims=True) |
| |
|
| | def collapse(self, n_iterations=50): |
| | """ |
| | Move bubbles to the center of mass. |
| | |
| | Parameters |
| | ---------- |
| | n_iterations : int, default: 50 |
| | Number of moves to perform. |
| | """ |
| | for _i in range(n_iterations): |
| | moves = 0 |
| | for i in range(len(self.bubbles)): |
| | rest_bub = np.delete(self.bubbles, i, 0) |
| | |
| | |
| | dir_vec = self.com - self.bubbles[i, :2] |
| |
|
| | |
| | dir_vec = dir_vec / np.sqrt(dir_vec.dot(dir_vec)) |
| |
|
| | |
| | new_point = self.bubbles[i, :2] + dir_vec * self.step_dist |
| | new_bubble = np.append(new_point, self.bubbles[i, 2:4]) |
| |
|
| | |
| | if not self.check_collisions(new_bubble, rest_bub): |
| | self.bubbles[i, :] = new_bubble |
| | self.com = self.center_of_mass() |
| | moves += 1 |
| | else: |
| | |
| | |
| | for colliding in self.collides_with(new_bubble, rest_bub): |
| | |
| | dir_vec = rest_bub[colliding, :2] - self.bubbles[i, :2] |
| | dir_vec = dir_vec / np.sqrt(dir_vec.dot(dir_vec)) |
| | |
| | orth = np.array([dir_vec[1], -dir_vec[0]]) |
| | |
| | new_point1 = (self.bubbles[i, :2] + orth * |
| | self.step_dist) |
| | new_point2 = (self.bubbles[i, :2] - orth * |
| | self.step_dist) |
| | dist1 = self.center_distance( |
| | self.com, np.array([new_point1])) |
| | dist2 = self.center_distance( |
| | self.com, np.array([new_point2])) |
| | new_point = new_point1 if dist1 < dist2 else new_point2 |
| | new_bubble = np.append(new_point, self.bubbles[i, 2:4]) |
| | if not self.check_collisions(new_bubble, rest_bub): |
| | self.bubbles[i, :] = new_bubble |
| | self.com = self.center_of_mass() |
| |
|
| | if moves / len(self.bubbles) < 0.1: |
| | self.step_dist = self.step_dist / 2 |
| |
|
| | def plot(self, ax, labels, colors): |
| | """ |
| | Draw the bubble plot. |
| | |
| | Parameters |
| | ---------- |
| | ax : matplotlib.axes.Axes |
| | labels : list |
| | Labels of the bubbles. |
| | colors : list |
| | Colors of the bubbles. |
| | """ |
| | for i in range(len(self.bubbles)): |
| | circ = plt.Circle( |
| | self.bubbles[i, :2], self.bubbles[i, 2], color=colors[i]) |
| | ax.add_patch(circ) |
| | ax.text(*self.bubbles[i, :2], labels[i], |
| | horizontalalignment='center', verticalalignment='center') |
| |
|
| |
|
| | bubble_chart = BubbleChart(area=browser_market_share['market_share'], |
| | bubble_spacing=0.1) |
| |
|
| | bubble_chart.collapse() |
| |
|
| | fig, ax = plt.subplots(subplot_kw=dict(aspect="equal")) |
| | bubble_chart.plot( |
| | ax, browser_market_share['browsers'], browser_market_share['color']) |
| | ax.axis("off") |
| | ax.relim() |
| | ax.autoscale_view() |
| | ax.set_title('Browser market share') |
| |
|
| | plt.show() |
| |
|