| | from __future__ import absolute_import |
| |
|
| | import mock |
| | import pytest |
| | import pandas as pd |
| |
|
| | from collections import OrderedDict |
| |
|
| | from sagemaker.analytics import ExperimentAnalytics |
| |
|
| |
|
| | @pytest.fixture |
| | def mock_session(): |
| | return mock.Mock() |
| |
|
| |
|
| | def trial_component(trial_component_name): |
| | return { |
| | "TrialComponentName": trial_component_name, |
| | "DisplayName": "Training", |
| | "Source": {"SourceArn": "some-source-arn"}, |
| | "Parameters": {"hp1": {"NumberValue": 1.0}, "hp2": {"StringValue": "abc"}}, |
| | "Metrics": [ |
| | { |
| | "MetricName": "metric1", |
| | "Max": 5.0, |
| | "Min": 3.0, |
| | "Avg": 4.0, |
| | "StdDev": 1.0, |
| | "Last": 2.0, |
| | "Count": 2.0, |
| | }, |
| | { |
| | "MetricName": "metric2", |
| | "Max": 10.0, |
| | "Min": 8.0, |
| | "Avg": 9.0, |
| | "StdDev": 0.05, |
| | "Last": 7.0, |
| | "Count": 2.0, |
| | }, |
| | ], |
| | "InputArtifacts": { |
| | "inputArtifacts1": {"MediaType": "text/plain", "Value": "s3:/foo/bar1"}, |
| | "inputArtifacts2": {"MediaType": "text/plain", "Value": "s3:/foo/bar2"}, |
| | }, |
| | "OutputArtifacts": { |
| | "outputArtifacts1": {"MediaType": "text/csv", "Value": "s3:/sky/far1"}, |
| | "outputArtifacts2": {"MediaType": "text/csv", "Value": "s3:/sky/far2"}, |
| | }, |
| | "Parents": [{"TrialName": "trial1", "ExperimentName": "experiment1"}], |
| | } |
| |
|
| |
|
| | def test_trial_analytics_dataframe_all(mock_session): |
| | mock_session.sagemaker_client.search.return_value = { |
| | "Results": [ |
| | {"TrialComponent": trial_component("trial-1")}, |
| | {"TrialComponent": trial_component("trial-2")}, |
| | ] |
| | } |
| | analytics = ExperimentAnalytics(experiment_name="experiment1", sagemaker_session=mock_session) |
| |
|
| | expected_dataframe = pd.DataFrame.from_dict( |
| | OrderedDict( |
| | [ |
| | ("TrialComponentName", ["trial-1", "trial-2"]), |
| | ("DisplayName", ["Training", "Training"]), |
| | ("SourceArn", ["some-source-arn", "some-source-arn"]), |
| | ("hp1", [1.0, 1.0]), |
| | ("hp2", ["abc", "abc"]), |
| | ("metric1 - Min", [3.0, 3.0]), |
| | ("metric1 - Max", [5.0, 5.0]), |
| | ("metric1 - Avg", [4.0, 4.0]), |
| | ("metric1 - StdDev", [1.0, 1.0]), |
| | ("metric1 - Last", [2.0, 2.0]), |
| | ("metric1 - Count", [2.0, 2.0]), |
| | ("metric2 - Min", [8.0, 8.0]), |
| | ("metric2 - Max", [10.0, 10.0]), |
| | ("metric2 - Avg", [9.0, 9.0]), |
| | ("metric2 - StdDev", [0.05, 0.05]), |
| | ("metric2 - Last", [7.0, 7.0]), |
| | ("metric2 - Count", [2.0, 2.0]), |
| | ("inputArtifacts1 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts1 - Value", ["s3:/foo/bar1", "s3:/foo/bar1"]), |
| | ("inputArtifacts2 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts2 - Value", ["s3:/foo/bar2", "s3:/foo/bar2"]), |
| | ("outputArtifacts1 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts1 - Value", ["s3:/sky/far1", "s3:/sky/far1"]), |
| | ("outputArtifacts2 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts2 - Value", ["s3:/sky/far2", "s3:/sky/far2"]), |
| | ("Trials", [["trial1"], ["trial1"]]), |
| | ("Experiments", [["experiment1"], ["experiment1"]]), |
| | ] |
| | ) |
| | ) |
| |
|
| | pd.testing.assert_frame_equal(expected_dataframe, analytics.dataframe()) |
| | expected_search_exp = { |
| | "Filters": [ |
| | {"Name": "Parents.ExperimentName", "Operator": "Equals", "Value": "experiment1"} |
| | ] |
| | } |
| | mock_session.sagemaker_client.search.assert_called_with( |
| | Resource="ExperimentTrialComponent", SearchExpression=expected_search_exp |
| | ) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_selected_hyperparams(mock_session): |
| | mock_session.sagemaker_client.search.return_value = { |
| | "Results": [ |
| | {"TrialComponent": trial_component("trial-1")}, |
| | {"TrialComponent": trial_component("trial-2")}, |
| | ] |
| | } |
| | analytics = ExperimentAnalytics( |
| | experiment_name="experiment1", parameter_names=["hp2"], sagemaker_session=mock_session |
| | ) |
| |
|
| | expected_dataframe = pd.DataFrame.from_dict( |
| | OrderedDict( |
| | [ |
| | ("TrialComponentName", ["trial-1", "trial-2"]), |
| | ("DisplayName", ["Training", "Training"]), |
| | ("SourceArn", ["some-source-arn", "some-source-arn"]), |
| | ("hp2", ["abc", "abc"]), |
| | ("metric1 - Min", [3.0, 3.0]), |
| | ("metric1 - Max", [5.0, 5.0]), |
| | ("metric1 - Avg", [4.0, 4.0]), |
| | ("metric1 - StdDev", [1.0, 1.0]), |
| | ("metric1 - Last", [2.0, 2.0]), |
| | ("metric1 - Count", [2.0, 2.0]), |
| | ("metric2 - Min", [8.0, 8.0]), |
| | ("metric2 - Max", [10.0, 10.0]), |
| | ("metric2 - Avg", [9.0, 9.0]), |
| | ("metric2 - StdDev", [0.05, 0.05]), |
| | ("metric2 - Last", [7.0, 7.0]), |
| | ("metric2 - Count", [2.0, 2.0]), |
| | ("inputArtifacts1 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts1 - Value", ["s3:/foo/bar1", "s3:/foo/bar1"]), |
| | ("inputArtifacts2 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts2 - Value", ["s3:/foo/bar2", "s3:/foo/bar2"]), |
| | ("outputArtifacts1 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts1 - Value", ["s3:/sky/far1", "s3:/sky/far1"]), |
| | ("outputArtifacts2 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts2 - Value", ["s3:/sky/far2", "s3:/sky/far2"]), |
| | ("Trials", [["trial1"], ["trial1"]]), |
| | ("Experiments", [["experiment1"], ["experiment1"]]), |
| | ] |
| | ) |
| | ) |
| |
|
| | pd.testing.assert_frame_equal(expected_dataframe, analytics.dataframe()) |
| | expected_search_exp = { |
| | "Filters": [ |
| | {"Name": "Parents.ExperimentName", "Operator": "Equals", "Value": "experiment1"} |
| | ] |
| | } |
| | mock_session.sagemaker_client.search.assert_called_with( |
| | Resource="ExperimentTrialComponent", SearchExpression=expected_search_exp |
| | ) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_selected_metrics(mock_session): |
| | mock_session.sagemaker_client.search.return_value = { |
| | "Results": [ |
| | {"TrialComponent": trial_component("trial-1")}, |
| | {"TrialComponent": trial_component("trial-2")}, |
| | ] |
| | } |
| | analytics = ExperimentAnalytics( |
| | experiment_name="experiment1", metric_names=["metric1"], sagemaker_session=mock_session |
| | ) |
| |
|
| | expected_dataframe = pd.DataFrame.from_dict( |
| | OrderedDict( |
| | [ |
| | ("TrialComponentName", ["trial-1", "trial-2"]), |
| | ("DisplayName", ["Training", "Training"]), |
| | ("SourceArn", ["some-source-arn", "some-source-arn"]), |
| | ("hp1", [1.0, 1.0]), |
| | ("hp2", ["abc", "abc"]), |
| | ("metric1 - Min", [3.0, 3.0]), |
| | ("metric1 - Max", [5.0, 5.0]), |
| | ("metric1 - Avg", [4.0, 4.0]), |
| | ("metric1 - StdDev", [1.0, 1.0]), |
| | ("metric1 - Last", [2.0, 2.0]), |
| | ("metric1 - Count", [2.0, 2.0]), |
| | ("inputArtifacts1 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts1 - Value", ["s3:/foo/bar1", "s3:/foo/bar1"]), |
| | ("inputArtifacts2 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts2 - Value", ["s3:/foo/bar2", "s3:/foo/bar2"]), |
| | ("outputArtifacts1 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts1 - Value", ["s3:/sky/far1", "s3:/sky/far1"]), |
| | ("outputArtifacts2 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts2 - Value", ["s3:/sky/far2", "s3:/sky/far2"]), |
| | ("Trials", [["trial1"], ["trial1"]]), |
| | ("Experiments", [["experiment1"], ["experiment1"]]), |
| | ] |
| | ) |
| | ) |
| |
|
| | pd.testing.assert_frame_equal(expected_dataframe, analytics.dataframe()) |
| | expected_search_exp = { |
| | "Filters": [ |
| | {"Name": "Parents.ExperimentName", "Operator": "Equals", "Value": "experiment1"} |
| | ] |
| | } |
| | mock_session.sagemaker_client.search.assert_called_with( |
| | Resource="ExperimentTrialComponent", SearchExpression=expected_search_exp |
| | ) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_search_pagination(mock_session): |
| | result_page_1 = { |
| | "Results": [{"TrialComponent": trial_component("trial-1")}], |
| | "NextToken": "nextToken", |
| | } |
| |
|
| | result_page_2 = {"Results": [{"TrialComponent": trial_component("trial-2")}]} |
| |
|
| | mock_session.sagemaker_client.search.side_effect = [result_page_1, result_page_2] |
| | analytics = ExperimentAnalytics(experiment_name="experiment1", sagemaker_session=mock_session) |
| |
|
| | expected_dataframe = pd.DataFrame.from_dict( |
| | OrderedDict( |
| | [ |
| | ("TrialComponentName", ["trial-1", "trial-2"]), |
| | ("DisplayName", ["Training", "Training"]), |
| | ("SourceArn", ["some-source-arn", "some-source-arn"]), |
| | ("hp1", [1.0, 1.0]), |
| | ("hp2", ["abc", "abc"]), |
| | ("metric1 - Min", [3.0, 3.0]), |
| | ("metric1 - Max", [5.0, 5.0]), |
| | ("metric1 - Avg", [4.0, 4.0]), |
| | ("metric1 - StdDev", [1.0, 1.0]), |
| | ("metric1 - Last", [2.0, 2.0]), |
| | ("metric1 - Count", [2.0, 2.0]), |
| | ("metric2 - Min", [8.0, 8.0]), |
| | ("metric2 - Max", [10.0, 10.0]), |
| | ("metric2 - Avg", [9.0, 9.0]), |
| | ("metric2 - StdDev", [0.05, 0.05]), |
| | ("metric2 - Last", [7.0, 7.0]), |
| | ("metric2 - Count", [2.0, 2.0]), |
| | ("inputArtifacts1 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts1 - Value", ["s3:/foo/bar1", "s3:/foo/bar1"]), |
| | ("inputArtifacts2 - MediaType", ["text/plain", "text/plain"]), |
| | ("inputArtifacts2 - Value", ["s3:/foo/bar2", "s3:/foo/bar2"]), |
| | ("outputArtifacts1 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts1 - Value", ["s3:/sky/far1", "s3:/sky/far1"]), |
| | ("outputArtifacts2 - MediaType", ["text/csv", "text/csv"]), |
| | ("outputArtifacts2 - Value", ["s3:/sky/far2", "s3:/sky/far2"]), |
| | ("Trials", [["trial1"], ["trial1"]]), |
| | ("Experiments", [["experiment1"], ["experiment1"]]), |
| | ] |
| | ) |
| | ) |
| |
|
| | pd.testing.assert_frame_equal(expected_dataframe, analytics.dataframe()) |
| | expected_search_exp = { |
| | "Filters": [ |
| | {"Name": "Parents.ExperimentName", "Operator": "Equals", "Value": "experiment1"} |
| | ] |
| | } |
| | mock_session.sagemaker_client.search.assert_has_calls( |
| | [ |
| | mock.call(Resource="ExperimentTrialComponent", SearchExpression=expected_search_exp), |
| | mock.call( |
| | Resource="ExperimentTrialComponent", |
| | SearchExpression=expected_search_exp, |
| | NextToken="nextToken", |
| | ), |
| | ] |
| | ) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_filter_trials_search_exp_only(mock_session): |
| | mock_session.sagemaker_client.search.return_value = {"Results": []} |
| |
|
| | search_exp = {"Filters": [{"Name": "Tags.someTag", "Operator": "Equals", "Value": "someValue"}]} |
| | analytics = ExperimentAnalytics(search_expression=search_exp, sagemaker_session=mock_session) |
| |
|
| | analytics.dataframe() |
| |
|
| | mock_session.sagemaker_client.search.assert_called_with( |
| | Resource="ExperimentTrialComponent", SearchExpression=search_exp |
| | ) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_filter_trials_search_exp_with_experiment(mock_session): |
| | mock_session.sagemaker_client.search.return_value = {"Results": []} |
| |
|
| | search_exp = {"Filters": [{"Name": "Tags.someTag", "Operator": "Equals", "Value": "someValue"}]} |
| | analytics = ExperimentAnalytics( |
| | experiment_name="someExperiment", |
| | search_expression=search_exp, |
| | sagemaker_session=mock_session, |
| | ) |
| |
|
| | analytics.dataframe() |
| |
|
| | expected_search_exp = { |
| | "Filters": [ |
| | {"Name": "Tags.someTag", "Operator": "Equals", "Value": "someValue"}, |
| | {"Name": "Parents.ExperimentName", "Operator": "Equals", "Value": "someExperiment"}, |
| | ] |
| | } |
| |
|
| | mock_session.sagemaker_client.search.assert_called_with( |
| | Resource="ExperimentTrialComponent", SearchExpression=expected_search_exp |
| | ) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_throws_error_if_no_filter_specified(mock_session): |
| | with pytest.raises(ValueError): |
| | ExperimentAnalytics(sagemaker_session=mock_session) |
| |
|
| |
|
| | def test_trial_analytics_dataframe_filter_trials_search_exp_with_sort(mock_session): |
| | mock_session.sagemaker_client.search.return_value = {"Results": []} |
| |
|
| | search_exp = {"Filters": [{"Name": "Tags.someTag", "Operator": "Equals", "Value": "someValue"}]} |
| | analytics = ExperimentAnalytics( |
| | experiment_name="someExperiment", |
| | search_expression=search_exp, |
| | sort_by="Tags.someTag", |
| | sort_order="Ascending", |
| | sagemaker_session=mock_session, |
| | ) |
| |
|
| | analytics.dataframe() |
| |
|
| | expected_search_exp = { |
| | "Filters": [ |
| | {"Name": "Tags.someTag", "Operator": "Equals", "Value": "someValue"}, |
| | {"Name": "Parents.ExperimentName", "Operator": "Equals", "Value": "someExperiment"}, |
| | ] |
| | } |
| |
|
| | mock_session.sagemaker_client.search.assert_called_with( |
| | Resource="ExperimentTrialComponent", |
| | SearchExpression=expected_search_exp, |
| | SortBy="Tags.someTag", |
| | SortOrder="Ascending", |
| | ) |
| |
|