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# Copyright Amazon.com, Inc. or its affiliates. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"). You
# may not use this file except in compliance with the License. A copy of
# the License is located at
#
# http://aws.amazon.com/apache2.0/
#
# or in the "license" file accompanying this file. This file is
# distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF
# ANY KIND, either express or implied. See the License for the specific
# language governing permissions and limitations under the License.
from __future__ import absolute_import
import io
import json
import os
import numpy as np
import pytest
import scipy.sparse
from sagemaker.serializers import (
CSVSerializer,
NumpySerializer,
JSONSerializer,
IdentitySerializer,
SparseMatrixSerializer,
JSONLinesSerializer,
LibSVMSerializer,
DataSerializer,
)
from tests.unit import DATA_DIR
@pytest.fixture
def csv_serializer():
return CSVSerializer()
def test_csv_serializer_str(csv_serializer):
original = "1,2,3"
result = csv_serializer.serialize("1,2,3")
assert result == original
def test_csv_serializer_python_array(csv_serializer):
result = csv_serializer.serialize([1, 2, 3])
assert result == "1,2,3"
def test_csv_serializer_numpy_valid(csv_serializer):
result = csv_serializer.serialize(np.array([1, 2, 3]))
assert result == "1,2,3"
def test_csv_serializer_numpy_valid_2dimensional(csv_serializer):
result = csv_serializer.serialize(np.array([[1, 2, 3], [3, 4, 5]]))
assert result == "1,2,3\n3,4,5"
def test_csv_serializer_list_of_str(csv_serializer):
result = csv_serializer.serialize(["1,2,3", "4,5,6"])
assert result == "1,2,3\n4,5,6"
def test_csv_serializer_list_of_list(csv_serializer):
result = csv_serializer.serialize([[1, 2, 3], [3, 4, 5]])
assert result == "1,2,3\n3,4,5"
def test_csv_serializer_list_of_empty(csv_serializer):
with pytest.raises(ValueError) as invalid_input:
csv_serializer.serialize(np.array([[], []]))
assert "empty array" in str(invalid_input)
def test_csv_serializer_numpy_invalid_empty(csv_serializer):
with pytest.raises(ValueError) as invalid_input:
csv_serializer.serialize(np.array([]))
assert "empty array" in str(invalid_input)
def test_csv_serializer_python_invalid_empty(csv_serializer):
with pytest.raises(ValueError) as error:
csv_serializer.serialize([])
assert "empty array" in str(error)
def test_csv_serializer_csv_reader(csv_serializer):
csv_file_path = os.path.join(DATA_DIR, "with_integers.csv")
with open(csv_file_path) as csv_file:
validation_data = csv_file.read()
csv_file.seek(0)
result = csv_serializer.serialize(csv_file)
assert result == validation_data
@pytest.fixture
def numpy_serializer():
return NumpySerializer()
def test_numpy_serializer_python_array(numpy_serializer):
array = [1, 2, 3]
result = numpy_serializer.serialize(array)
assert np.array_equal(array, np.load(io.BytesIO(result)))
def test_numpy_serializer_python_array_with_dtype():
numpy_serializer = NumpySerializer(dtype="float16")
array = [1, 2, 3]
result = numpy_serializer.serialize(array)
deserialized = np.load(io.BytesIO(result))
assert np.array_equal(array, deserialized)
assert deserialized.dtype == "float16"
def test_numpy_serializer_numpy_valid_2_dimensional(numpy_serializer):
array = np.array([[1, 2, 3], [3, 4, 5]])
result = numpy_serializer.serialize(array)
assert np.array_equal(array, np.load(io.BytesIO(result)))
def test_numpy_serializer_numpy_valid_multidimensional(numpy_serializer):
array = np.ones((10, 10, 10, 10))
result = numpy_serializer.serialize(array)
assert np.array_equal(array, np.load(io.BytesIO(result)))
def test_numpy_serializer_numpy_valid_list_of_strings(numpy_serializer):
array = np.array(["one", "two", "three"])
result = numpy_serializer.serialize(array)
assert np.array_equal(array, np.load(io.BytesIO(result)))
def test_numpy_serializer_from_buffer_or_file(numpy_serializer):
array = np.ones((2, 3))
stream = io.BytesIO()
np.save(stream, array)
stream.seek(0)
result = numpy_serializer.serialize(stream)
assert np.array_equal(array, np.load(io.BytesIO(result)))
def test_numpy_serializer_object(numpy_serializer):
object = {1, 2, 3}
result = numpy_serializer.serialize(object)
assert np.array_equal(np.array(object), np.load(io.BytesIO(result), allow_pickle=True))
def test_numpy_serializer_list_of_empty(numpy_serializer):
with pytest.raises(ValueError) as invalid_input:
numpy_serializer.serialize(np.array([[], []]))
assert "empty array" in str(invalid_input)
def test_numpy_serializer_numpy_invalid_empty(numpy_serializer):
with pytest.raises(ValueError) as invalid_input:
numpy_serializer.serialize(np.array([]))
assert "empty array" in str(invalid_input)
def test_numpy_serializer_python_invalid_empty(numpy_serializer):
with pytest.raises(ValueError) as error:
numpy_serializer.serialize([])
assert "empty array" in str(error)
@pytest.fixture
def json_serializer():
return JSONSerializer()
def test_json_serializer_numpy_valid(json_serializer):
result = json_serializer.serialize(np.array([1, 2, 3]))
assert result == "[1, 2, 3]"
def test_json_serializer_numpy_valid_2dimensional(json_serializer):
result = json_serializer.serialize(np.array([[1, 2, 3], [3, 4, 5]]))
assert result == "[[1, 2, 3], [3, 4, 5]]"
def test_json_serializer_empty(json_serializer):
assert json_serializer.serialize(np.array([])) == "[]"
def test_json_serializer_python_array(json_serializer):
result = json_serializer.serialize([1, 2, 3])
assert result == "[1, 2, 3]"
def test_json_serializer_python_dictionary(json_serializer):
d = {"gender": "m", "age": 22, "city": "Paris"}
result = json_serializer.serialize(d)
assert json.loads(result) == d
def test_json_serializer_python_invalid_empty(json_serializer):
assert json_serializer.serialize([]) == "[]"
def test_json_serializer_python_dictionary_invalid_empty(json_serializer):
assert json_serializer.serialize({}) == "{}"
def test_json_serializer_csv_buffer(json_serializer):
csv_file_path = os.path.join(DATA_DIR, "with_integers.csv")
with open(csv_file_path) as csv_file:
validation_value = csv_file.read()
csv_file.seek(0)
result = json_serializer.serialize(csv_file)
assert result == validation_value
def test_identity_serializer():
identity_serializer = IdentitySerializer()
assert identity_serializer.serialize(b"{}") == b"{}"
def test_identity_serializer_with_custom_content_type():
identity_serializer = IdentitySerializer(content_type="text/csv")
assert identity_serializer.serialize(b"a,b\n1,2") == b"a,b\n1,2"
assert identity_serializer.CONTENT_TYPE == "text/csv"
@pytest.fixture
def json_lines_serializer():
return JSONLinesSerializer()
@pytest.mark.parametrize(
"input, expected",
[
('["Name", "Score"]\n["Gilbert", 24]', '["Name", "Score"]\n["Gilbert", 24]'),
(
'{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}',
'{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}',
),
],
)
def test_json_lines_serializer_string(json_lines_serializer, input, expected):
actual = json_lines_serializer.serialize(input)
assert actual == expected
@pytest.mark.parametrize(
"input, expected",
[
([["Name", "Score"], ["Gilbert", 24]], '["Name", "Score"]\n["Gilbert", 24]'),
(
[{"Name": "Gilbert", "Score": 24}, {"Name": "Alexa", "Score": 29}],
'{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}',
),
],
)
def test_json_lines_serializer_list(json_lines_serializer, input, expected):
actual = json_lines_serializer.serialize(input)
assert actual == expected
@pytest.mark.parametrize(
"source, expected",
[
('["Name", "Score"]\n["Gilbert", 24]', '["Name", "Score"]\n["Gilbert", 24]'),
(
'{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}',
'{"Name": "Gilbert", "Score": 24}\n{"Name": "Alexa", "Score": 29}',
),
],
)
def test_json_lines_serializer_file_like(json_lines_serializer, source, expected):
input = io.StringIO(source)
actual = json_lines_serializer.serialize(input)
assert actual == expected
@pytest.fixture
def sparse_matrix_serializer():
return SparseMatrixSerializer()
def test_sparse_matrix_serializer(sparse_matrix_serializer):
data = scipy.sparse.csc_matrix(np.array([[0, 0, 3], [4, 0, 0]]))
stream = io.BytesIO(sparse_matrix_serializer.serialize(data))
result = scipy.sparse.load_npz(stream).toarray()
expected = data.toarray()
assert np.array_equal(result, expected)
@pytest.fixture
def libsvm_serializer():
return LibSVMSerializer()
def test_libsvm_serializer_str(libsvm_serializer):
original = "0 0:1 5:1"
result = libsvm_serializer.serialize("0 0:1 5:1")
assert result == original
def test_libsvm_serializer_file_like(libsvm_serializer):
libsvm_file_path = os.path.join(DATA_DIR, "xgboost_abalone", "abalone")
with open(libsvm_file_path) as libsvm_file:
validation_data = libsvm_file.read()
libsvm_file.seek(0)
result = libsvm_serializer.serialize(libsvm_file)
assert result == validation_data
@pytest.fixture
def data_serializer():
return DataSerializer()
def test_data_serializer_raw(data_serializer):
input_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.jpg")
with open(input_image_file_path, "rb") as image:
input_image = image.read()
input_image_data = data_serializer.serialize(input_image)
validation_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.raw")
validation_image_data = open(validation_image_file_path, "rb").read()
assert input_image_data == validation_image_data
def test_data_serializer_file_like(data_serializer):
input_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.jpg")
validation_image_file_path = os.path.join(DATA_DIR, "", "cuteCat.raw")
input_image_data = data_serializer.serialize(input_image_file_path)
validation_image_data = open(validation_image_file_path, "rb").read()
assert input_image_data == validation_image_data