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| | """Implements methods for deserializing data returned from an inference endpoint.""" |
| | from __future__ import absolute_import |
| |
|
| | import csv |
| |
|
| | import abc |
| | import codecs |
| | import io |
| | import json |
| |
|
| | import numpy as np |
| | from six import with_metaclass |
| |
|
| | from sagemaker.utils import DeferredError |
| |
|
| | try: |
| | import pandas |
| | except ImportError as e: |
| | pandas = DeferredError(e) |
| |
|
| |
|
| | class BaseDeserializer(abc.ABC): |
| | """Abstract base class for creation of new deserializers. |
| | |
| | Provides a skeleton for customization requiring the overriding of the method |
| | deserialize and the class attribute ACCEPT. |
| | """ |
| |
|
| | @abc.abstractmethod |
| | def deserialize(self, stream, content_type): |
| | """Deserialize data received from an inference endpoint. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | object: The data deserialized into an object. |
| | """ |
| |
|
| | @property |
| | @abc.abstractmethod |
| | def ACCEPT(self): |
| | """The content types that are expected from the inference endpoint.""" |
| |
|
| |
|
| | class SimpleBaseDeserializer(with_metaclass(abc.ABCMeta, BaseDeserializer)): |
| | """Abstract base class for creation of new deserializers. |
| | |
| | This class extends the API of :class:~`sagemaker.deserializers.BaseDeserializer` with more |
| | user-friendly options for setting the ACCEPT content type header, in situations where it can be |
| | provided at init and freely updated. |
| | """ |
| |
|
| | def __init__(self, accept="*/*"): |
| | """Initialize a ``SimpleBaseDeserializer`` instance. |
| | |
| | Args: |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: "*/*"). |
| | """ |
| | super(SimpleBaseDeserializer, self).__init__() |
| | self.accept = accept |
| |
|
| | @property |
| | def ACCEPT(self): |
| | """The tuple of possible content types that are expected from the inference endpoint.""" |
| | if isinstance(self.accept, str): |
| | return (self.accept,) |
| | return self.accept |
| |
|
| |
|
| | class StringDeserializer(SimpleBaseDeserializer): |
| | """Deserialize data from an inference endpoint into a decoded string.""" |
| |
|
| | def __init__(self, encoding="UTF-8", accept="application/json"): |
| | """Initialize a ``StringDeserializer`` instance. |
| | |
| | Args: |
| | encoding (str): The string encoding to use (default: UTF-8). |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: "application/json"). |
| | """ |
| | super(StringDeserializer, self).__init__(accept=accept) |
| | self.encoding = encoding |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Deserialize data from an inference endpoint into a decoded string. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | str: The data deserialized into a decoded string. |
| | """ |
| | try: |
| | return stream.read().decode(self.encoding) |
| | finally: |
| | stream.close() |
| |
|
| |
|
| | class BytesDeserializer(SimpleBaseDeserializer): |
| | """Deserialize a stream of bytes into a bytes object.""" |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Read a stream of bytes returned from an inference endpoint. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): A stream of bytes. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | bytes: The bytes object read from the stream. |
| | """ |
| | try: |
| | return stream.read() |
| | finally: |
| | stream.close() |
| |
|
| |
|
| | class CSVDeserializer(SimpleBaseDeserializer): |
| | """Deserialize a stream of bytes into a list of lists. |
| | |
| | Consider using :class:~`sagemaker.deserializers.NumpyDeserializer` or |
| | :class:~`sagemaker.deserializers.PandasDeserializer` instead, if you'd like to convert text/csv |
| | responses directly into other data types. |
| | """ |
| |
|
| | def __init__(self, encoding="utf-8", accept="text/csv"): |
| | """Initialize a ``CSVDeserializer`` instance. |
| | |
| | Args: |
| | encoding (str): The string encoding to use (default: "utf-8"). |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: "text/csv"). |
| | """ |
| | super(CSVDeserializer, self).__init__(accept=accept) |
| | self.encoding = encoding |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Deserialize data from an inference endpoint into a list of lists. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | list: The data deserialized into a list of lists representing the |
| | contents of a CSV file. |
| | """ |
| | try: |
| | decoded_string = stream.read().decode(self.encoding) |
| | return list(csv.reader(decoded_string.splitlines())) |
| | finally: |
| | stream.close() |
| |
|
| |
|
| | class StreamDeserializer(SimpleBaseDeserializer): |
| | """Directly return the data and content-type received from an inference endpoint. |
| | |
| | It is the user's responsibility to close the data stream once they're done |
| | reading it. |
| | """ |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Returns a stream of the response body and the MIME type of the data. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): A stream of bytes. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | tuple: A two-tuple containing the stream and content-type. |
| | """ |
| | return stream, content_type |
| |
|
| |
|
| | class NumpyDeserializer(SimpleBaseDeserializer): |
| | """Deserialize a stream of data in .npy or UTF-8 CSV/JSON format to a numpy array.""" |
| |
|
| | def __init__(self, dtype=None, accept="application/x-npy", allow_pickle=True): |
| | """Initialize a ``NumpyDeserializer`` instance. |
| | |
| | Args: |
| | dtype (str): The dtype of the data (default: None). |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: "application/x-npy"). |
| | allow_pickle (bool): Allow loading pickled object arrays (default: True). |
| | """ |
| | super(NumpyDeserializer, self).__init__(accept=accept) |
| | self.dtype = dtype |
| | self.allow_pickle = allow_pickle |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Deserialize data from an inference endpoint into a NumPy array. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | numpy.ndarray: The data deserialized into a NumPy array. |
| | """ |
| | try: |
| | if content_type == "text/csv": |
| | return np.genfromtxt( |
| | codecs.getreader("utf-8")(stream), delimiter=",", dtype=self.dtype |
| | ) |
| | if content_type == "application/json": |
| | return np.array(json.load(codecs.getreader("utf-8")(stream)), dtype=self.dtype) |
| | if content_type == "application/x-npy": |
| | return np.load(io.BytesIO(stream.read()), allow_pickle=self.allow_pickle) |
| | finally: |
| | stream.close() |
| |
|
| | raise ValueError("%s cannot read content type %s." % (__class__.__name__, content_type)) |
| |
|
| |
|
| | class JSONDeserializer(SimpleBaseDeserializer): |
| | """Deserialize JSON data from an inference endpoint into a Python object.""" |
| |
|
| | def __init__(self, accept="application/json"): |
| | """Initialize a ``JSONDeserializer`` instance. |
| | |
| | Args: |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: "application/json"). |
| | """ |
| | super(JSONDeserializer, self).__init__(accept=accept) |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Deserialize JSON data from an inference endpoint into a Python object. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | object: The JSON-formatted data deserialized into a Python object. |
| | """ |
| | try: |
| | return json.load(codecs.getreader("utf-8")(stream)) |
| | finally: |
| | stream.close() |
| |
|
| |
|
| | class PandasDeserializer(SimpleBaseDeserializer): |
| | """Deserialize CSV or JSON data from an inference endpoint into a pandas dataframe.""" |
| |
|
| | def __init__(self, accept=("text/csv", "application/json")): |
| | """Initialize a ``PandasDeserializer`` instance. |
| | |
| | Args: |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: ("text/csv","application/json")). |
| | """ |
| | super(PandasDeserializer, self).__init__(accept=accept) |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Deserialize CSV or JSON data from an inference endpoint into a pandas dataframe. |
| | |
| | If the data is JSON, the data should be formatted in the 'columns' orient. |
| | See https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.read_json.html |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | pandas.DataFrame: The data deserialized into a pandas DataFrame. |
| | """ |
| | if content_type == "text/csv": |
| | return pandas.read_csv(stream) |
| |
|
| | if content_type == "application/json": |
| | return pandas.read_json(stream) |
| |
|
| | raise ValueError("%s cannot read content type %s." % (__class__.__name__, content_type)) |
| |
|
| |
|
| | class JSONLinesDeserializer(SimpleBaseDeserializer): |
| | """Deserialize JSON lines data from an inference endpoint.""" |
| |
|
| | def __init__(self, accept="application/jsonlines"): |
| | """Initialize a ``JSONLinesDeserializer`` instance. |
| | |
| | Args: |
| | accept (union[str, tuple[str]]): The MIME type (or tuple of allowable MIME types) that |
| | is expected from the inference endpoint (default: ("text/csv","application/json")). |
| | """ |
| | super(JSONLinesDeserializer, self).__init__(accept=accept) |
| |
|
| | def deserialize(self, stream, content_type): |
| | """Deserialize JSON lines data from an inference endpoint. |
| | |
| | See https://docs.python.org/3/library/json.html#py-to-json-table to |
| | understand how JSON values are converted to Python objects. |
| | |
| | Args: |
| | stream (botocore.response.StreamingBody): Data to be deserialized. |
| | content_type (str): The MIME type of the data. |
| | |
| | Returns: |
| | list: A list of JSON serializable objects. |
| | """ |
| | try: |
| | body = stream.read().decode("utf-8") |
| | lines = body.rstrip().split("\n") |
| | return [json.loads(line) for line in lines] |
| | finally: |
| | stream.close() |
| |
|