Add files using upload-large-folder tool
Browse files- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/_tabpfgen_generate.py +131 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/gen_20260512_144211.log +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/input_snapshot.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/public_gate/normalized_schema_snapshot.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/public_gate/public_gate_report.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/public_gate/staged_input_manifest.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/run_config.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/runtime_result.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/staged_features.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/test.csv +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/train.csv +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/val.csv +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/tabpfgen/adapter_report.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/tabpfgen/adapter_transforms_applied.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/tabpfgen/model_input_manifest.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/tabpfgen-c15-480000-20260512_144211.csv +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/tabpfgen_meta.json +3 -0
- syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/train_20260512_144211.log +3 -0
syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/_tabpfgen_generate.py
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| 1 |
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import os
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| 2 |
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import numpy as np
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| 3 |
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import pandas as pd
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| 4 |
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import json
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| 5 |
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from tabpfgen import TabPFGen
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| 6 |
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| 7 |
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df = pd.read_csv("/work/output-Benchmark-trainonly-v1/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/train.csv")
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| 8 |
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target_col = "target"
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| 9 |
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| 10 |
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target_missing = df[target_col].isna()
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| 11 |
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if target_missing.any():
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| 12 |
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dropped = int(target_missing.sum())
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| 13 |
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df = df.loc[~target_missing].copy()
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| 14 |
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print(
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| 15 |
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f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
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| 16 |
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)
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| 17 |
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if df.empty:
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| 18 |
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raise ValueError(
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| 19 |
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f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
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| 20 |
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)
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| 21 |
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| 22 |
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feature_cols = [c for c in df.columns if c != target_col]
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| 23 |
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| 24 |
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cat_encodings = {}
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| 25 |
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for col in feature_cols:
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| 26 |
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if df[col].dtype == object or str(df[col].dtype) == 'category':
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| 27 |
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cats = sorted(df[col].dropna().unique().tolist(), key=str)
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| 28 |
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cat_map = {v: i for i, v in enumerate(cats)}
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| 29 |
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df[col] = df[col].map(cat_map).astype(float)
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| 30 |
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cat_encodings[col] = cats
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| 31 |
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print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
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| 32 |
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| 33 |
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target_cats = None
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| 34 |
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if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
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| 35 |
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cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
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| 36 |
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t_map = {v: i for i, v in enumerate(cats)}
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| 37 |
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df[target_col] = df[target_col].map(t_map).astype(float)
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| 38 |
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target_cats = cats
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| 39 |
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print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
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| 40 |
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| 41 |
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X = df[feature_cols].values.astype(np.float32)
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| 42 |
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y = df[target_col].values
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| 43 |
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fit_rows_cap = max(1, int(os.environ.get("TABPFGEN_FIT_MAX_ROWS", "50000")))
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| 44 |
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if len(X) > fit_rows_cap:
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| 45 |
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rng = np.random.default_rng(42)
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| 46 |
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idx = np.sort(rng.choice(len(X), size=fit_rows_cap, replace=False))
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| 47 |
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X = X[idx]
|
| 48 |
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y = y[idx]
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| 49 |
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print(f"[TabPFGen] Downsampled fit rows -> {len(X)} (cap={fit_rows_cap})")
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| 50 |
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target_n = int(480000)
|
| 51 |
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|
| 52 |
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for i in range(X.shape[1]):
|
| 53 |
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col_vals = X[:, i]
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| 54 |
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mask = np.isnan(col_vals)
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| 55 |
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if mask.any():
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| 56 |
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mean_val = np.nanmean(col_vals)
|
| 57 |
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X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
|
| 58 |
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| 59 |
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chunk_rows = max(1, int(os.environ.get("TABPFGEN_GEN_CHUNK_ROWS", "256")))
|
| 60 |
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device = (os.environ.get("TABPFGEN_DEVICE") or "auto").strip() or "auto"
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| 61 |
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| 62 |
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n_sgld_steps = max(1, int(os.environ.get("TABPFGEN_N_SGLD_STEPS", "1000")))
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| 63 |
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sgld_step_size = float(os.environ.get("TABPFGEN_SGLD_STEP_SIZE", "0.01"))
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| 64 |
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sgld_noise_scale = float(os.environ.get("TABPFGEN_SGLD_NOISE_SCALE", "0.01"))
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| 65 |
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| 66 |
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# TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
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| 67 |
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# (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
|
| 68 |
+
gen = TabPFGen(
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| 69 |
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n_sgld_steps=n_sgld_steps,
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| 70 |
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sgld_step_size=sgld_step_size,
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| 71 |
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sgld_noise_scale=sgld_noise_scale,
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| 72 |
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device=device,
|
| 73 |
+
)
|
| 74 |
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|
| 75 |
+
print(
|
| 76 |
+
f"[TabPFGen] Generating {target_n} rows via generate_classification "
|
| 77 |
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f"(chunk_rows={chunk_rows}, device={device}, "
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| 78 |
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f"n_sgld_steps={n_sgld_steps}, sgld_step_size={sgld_step_size}, "
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| 79 |
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f"sgld_noise_scale={sgld_noise_scale})"
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| 80 |
+
)
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| 81 |
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x_parts = []
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| 82 |
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y_parts = []
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| 83 |
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remaining = target_n
|
| 84 |
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while remaining > 0:
|
| 85 |
+
take = min(chunk_rows, remaining)
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| 86 |
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X_part, y_part = gen.generate_classification(X, y, n_samples=take)
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| 87 |
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x_parts.append(np.asarray(X_part))
|
| 88 |
+
y_parts.append(np.asarray(y_part))
|
| 89 |
+
remaining -= take
|
| 90 |
+
print(f"[TabPFGen] chunk done: take={take}, remaining={remaining}")
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| 91 |
+
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| 92 |
+
X_syn = np.concatenate(x_parts, axis=0)
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| 93 |
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y_syn = np.concatenate(y_parts, axis=0)
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| 94 |
+
|
| 95 |
+
syn_df = pd.DataFrame(X_syn, columns=feature_cols)
|
| 96 |
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syn_df[target_col] = y_syn
|
| 97 |
+
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| 98 |
+
for col, cats in cat_encodings.items():
|
| 99 |
+
codes = np.round(syn_df[col].values).astype(int)
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| 100 |
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codes = np.clip(codes, 0, len(cats) - 1)
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| 101 |
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syn_df[col] = [cats[c] for c in codes]
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| 102 |
+
|
| 103 |
+
if target_cats is not None:
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| 104 |
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codes = np.round(syn_df[target_col].values).astype(int)
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| 105 |
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codes = np.clip(codes, 0, len(target_cats) - 1)
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| 106 |
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syn_df[target_col] = [target_cats[c] for c in codes]
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| 107 |
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|
| 108 |
+
if len(syn_df) > target_n:
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| 109 |
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print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
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| 110 |
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syn_df = syn_df.iloc[:target_n].copy()
|
| 111 |
+
elif len(syn_df) < target_n:
|
| 112 |
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deficit = target_n - len(syn_df)
|
| 113 |
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print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
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| 114 |
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if len(syn_df) > 0:
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| 115 |
+
extra = syn_df.sample(n=deficit, replace=True, random_state=42)
|
| 116 |
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syn_df = pd.concat(
|
| 117 |
+
[syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
|
| 118 |
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ignore_index=True,
|
| 119 |
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)
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| 120 |
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else:
|
| 121 |
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syn_df = df[feature_cols + [target_col]].sample(
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| 122 |
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n=target_n, replace=True, random_state=42
|
| 123 |
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).reset_index(drop=True)
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| 124 |
+
|
| 125 |
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syn_df = syn_df[list(df.columns)]
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| 126 |
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if len(syn_df) != target_n:
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| 127 |
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raise RuntimeError(
|
| 128 |
+
f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
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| 129 |
+
)
|
| 130 |
+
syn_df.to_csv("/work/output-Benchmark-trainonly-v1/c15/tabpfgen/tabpfgen-c15-20260512_144203/tabpfgen-c15-480000-20260512_144211.csv", index=False)
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| 131 |
+
print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/c15/tabpfgen/tabpfgen-c15-20260512_144203/tabpfgen-c15-480000-20260512_144211.csv")
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/gen_20260512_144211.log
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version https://git-lfs.github.com/spec/v1
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oid sha256:58d9f79c99918caef78f7b6bd7e40f218b58e1415f213bed00e1e1033b011250
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size 353677
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/input_snapshot.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:d752cc1ce1666ed515dc398d9882ad7561254e5771e26a7eda146d09a0e5d413
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size 1365
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/public_gate/normalized_schema_snapshot.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:e18dc098fd61958a51c24594cd5bad03aad3e07a097380b3aa9d6351ee18824a
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size 11438
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/public_gate/public_gate_report.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:c491eb29211dbb52507826c49cabccf8fe3583c072f7f08822b86a2769181aad
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size 920
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/public_gate/staged_input_manifest.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:909c790a1192dddb6ce3230485ec98d6134ed90d7c66de2c6e6fc8feba376bcb
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size 12264
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/run_config.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:e30073a5674b79480867e72d5f61d2e2749097c56f540ef228e5944559a0f16a
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size 2036
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/runtime_result.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:e3c8e68a36a9ffbc64a72d04bab975bff03fc5833ce9c6aab6bb0af499071ce2
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size 899
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/staged_features.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:5d5884fb0f913ab783893461f45f8c28269069b45754d30e21de3ff7da579227
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size 2300
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/test.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:1e68fec0fb16fb89b5e58bbb7949b744ebd11f8bf7b1d0c7aad908b17a2afb72
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size 8530452
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/train.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:e60fda0bb5a782d4e6917157f5a204d44e8e15de208c863574afc98855561477
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size 68240502
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/public/val.csv
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oid sha256:db13b576ba5284f2712b174f1b4445147bcb12fa295a4e38a1dc269d999d09fa
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size 8528882
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/tabpfgen/adapter_report.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:2b74fd465c1d0dc2f88d1026d8b6391695a0e3423b624e3d15edeea9e97aba03
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size 326
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/tabpfgen/adapter_transforms_applied.json
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oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
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size 2
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/staged/tabpfgen/model_input_manifest.json
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/tabpfgen-c15-480000-20260512_144211.csv
ADDED
|
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version https://git-lfs.github.com/spec/v1
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/tabpfgen_meta.json
ADDED
|
@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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syntheticSuccess/c15/tabpfgen/tabpfgen-c15-20260512_144203/train_20260512_144211.log
ADDED
|
@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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