Upload missingness strength diagnostic

evaluation/query_family/missingness/strength_diagnostic/analysis_report.md

@@ -0,0 +1,6 @@
+# Missingness Strength Diagnostic
+
+- Canonical missingness family score now keeps `co_missingness_pattern_consistency` as profile-only.
+- This auxiliary diagnostic isolates `co_missing_strength_score` so we can study whether models preserve the strength of structured missingness relations even when detailed profiles differ.
+- Applicable dataset-model panels: `80`
+- Applicable datasets: `12`

evaluation/query_family/missingness/strength_diagnostic/data/dataset_model_strength_scores.csv

@@ -0,0 +1,81 @@
+dataset_id,dataset_prefix,model_id,model_label,co_missingness_pattern_consistency,co_missing_strength_score,co_missing_composite_score,profile_minus_strength,strength_minus_profile,asset_count,applicable_asset_count
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+n4,n,ctgan,CTGAN,0.181374,0.78488,0.362426,-0.603506,0.603506,1,1
+n4,n,realtabformer,RealTabFormer,0.977539,0.978472,0.977819,-0.0009329999999999,0.0009329999999999616,1,1
+n4,n,tabbyflow,TabbyFlow,0.181374,0.78488,0.362426,-0.603506,0.603506,1,1
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+n4,n,tabpfgen,TabPFGen,0.181374,0.78488,0.362426,-0.603506,0.603506,1,1
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+n4,n,tvae,TVAE,0.294807,0.920332,0.482464,-0.6255250000000001,0.6255250000000001,1,1
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+n8,n,tvae,TVAE,0.698295,0.91396,0.762994,-0.215665,0.215665,1,1
+n18,n,arf,ARF,0.915683,0.711752,0.854504,0.2039309999999999,-0.20393099999999997,1,1
+n18,n,bayesnet,BayesNet,0.915683,0.711752,0.854504,0.2039309999999999,-0.20393099999999997,1,1
+n18,n,ctgan,CTGAN,0.915024,0.712821,0.854363,0.2022029999999999,-0.2022029999999999,1,1
+n18,n,tvae,TVAE,0.925452,0.724042,0.865029,0.2014100000000001,-0.2014100000000001,1,1

evaluation/query_family/missingness/strength_diagnostic/data/model_strength_summary.csv

@@ -0,0 +1,12 @@
+model_id,model_label,dataset_count,panel_count,profile_score_mean,strength_score_mean,composite_score_mean,strength_minus_profile_mean
+arf,ARF,12,12,0.857762,0.935475,0.881076,0.077713
+bayesnet,BayesNet,12,12,0.821066,0.926249,0.852621,0.105182
+ctgan,CTGAN,10,10,0.810134,0.908263,0.839573,0.098129
+forestdiffusion,ForestDiffusion,1,1,0.960127,0.991897,0.969658,0.03177
+realtabformer,RealTabFormer,11,11,0.96097,0.976742,0.965701,0.015773
+tabbyflow,TabbyFlow,5,5,0.653499,0.888296,0.723938,0.234798
+tabddpm,TabDDPM,4,4,0.699048,0.87796,0.752722,0.178912
+tabdiff,TabDiff,2,2,0.885162,0.889277,0.886397,0.004115
+tabpfgen,TabPFGen,6,6,0.769764,0.905572,0.810506,0.135808
+tabsyn,TabSyn,6,6,0.685331,0.898315,0.749226,0.212983
+tvae,TVAE,11,11,0.757181,0.909423,0.802853,0.152242

evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_dataset_model_heatmap_appendix.pdf

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evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_dataset_model_heatmap_appendix.tex

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+\documentclass[border=4pt]{standalone}
+\usepackage{graphicx}
+\begin{document}
+\textbf{Dataset-model strength heatmap}\\[0.5em]
+\includegraphics[width=\textwidth]{missing_strength_dataset_model_heatmap_appendix.pdf}
+\end{document}

evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_gap_bars_appendix.pdf

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evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_gap_bars_appendix.tex

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+\documentclass[border=4pt]{standalone}
+\usepackage{graphicx}
+\begin{document}
+\textbf{Strength minus profile}\\[0.5em]
+\includegraphics[width=\textwidth]{missing_strength_gap_bars_appendix.pdf}
+\end{document}

evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_profile_vs_strength_distribution_main.pdf

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evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_profile_vs_strength_distribution_main.tex

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+\documentclass[border=4pt]{standalone}
+\usepackage{graphicx}
+\begin{document}
+\textbf{Co-missing profile vs strength distribution}\\[0.5em]
+\includegraphics[width=\textwidth]{missing_strength_profile_vs_strength_distribution_main.pdf}
+\end{document}

evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_profile_vs_strength_model_dumbbell_main.pdf

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evaluation/query_family/missingness/strength_diagnostic/figures/missing_strength_profile_vs_strength_model_dumbbell_main.tex

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+\documentclass[border=4pt]{standalone}
+\usepackage{graphicx}
+\begin{document}
+\textbf{Missingness auxiliary insight: profile vs strength}\\[0.5em]
+\includegraphics[width=\textwidth]{missing_strength_profile_vs_strength_model_dumbbell_main.pdf}
+\end{document}

evaluation/query_family/missingness/strength_diagnostic/final/README.md

@@ -0,0 +1,45 @@
+# Missingness Strength Diagnostic
+
+Auxiliary paper-facing bundle isolating relation-strength fidelity from the canonical profile-only co-missing score.
+
+Primary paper-facing files:
+
+- `missing_strength_profile_vs_strength_model_dumbbell_main.pdf`
+- `missing_strength_profile_vs_strength_model_dumbbell_main.png`
+- `missing_strength_profile_vs_strength_model_dumbbell_main.tex`
+- `missing_strength_profile_vs_strength_distribution_main.pdf`
+- `missing_strength_profile_vs_strength_distribution_main.png`
+- `missing_strength_profile_vs_strength_distribution_main.tex`
+- `missing_strength_gap_bars_appendix.pdf`
+- `missing_strength_gap_bars_appendix.png`
+- `missing_strength_gap_bars_appendix.tex`
+- `missing_strength_dataset_model_heatmap_appendix.pdf`
+- `missing_strength_dataset_model_heatmap_appendix.png`
+- `missing_strength_dataset_model_heatmap_appendix.tex`
+
+Must-do bundle (`must_do/`):
+
+- `must_do/missing_strength_profile_vs_strength_model_dumbbell_main.pdf`
+- `must_do/missing_strength_profile_vs_strength_model_dumbbell_main.png`
+- `must_do/missing_strength_profile_vs_strength_model_dumbbell_main.svg`
+- `must_do/missing_strength_profile_vs_strength_model_dumbbell_main.tex`
+- `must_do/missing_strength_profile_vs_strength_distribution_main.pdf`
+- `must_do/missing_strength_profile_vs_strength_distribution_main.png`
+- `must_do/missing_strength_profile_vs_strength_distribution_main.svg`
+- `must_do/missing_strength_profile_vs_strength_distribution_main.tex`
+- `must_do/missing_strength_gap_bars_appendix.pdf`
+- `must_do/missing_strength_gap_bars_appendix.png`
+- `must_do/missing_strength_gap_bars_appendix.svg`
+- `must_do/missing_strength_gap_bars_appendix.tex`
+- `must_do/missing_strength_dataset_model_heatmap_appendix.pdf`
+- `must_do/missing_strength_dataset_model_heatmap_appendix.png`
+- `must_do/missing_strength_dataset_model_heatmap_appendix.svg`
+- `must_do/missing_strength_dataset_model_heatmap_appendix.tex`
+
+Support files:
+
+- `dataset_model_strength_scores.csv`
+- `model_strength_summary.csv`
+- `analysis_report.md`
+- `paper_caption.txt`
+- `paper_paragraphs.md`

evaluation/query_family/missingness/strength_diagnostic/final/analysis_report.md

@@ -0,0 +1,6 @@
+# Missingness Strength Diagnostic
+
+- Canonical missingness family score now keeps `co_missingness_pattern_consistency` as profile-only.
+- This auxiliary diagnostic isolates `co_missing_strength_score` so we can study whether models preserve the strength of structured missingness relations even when detailed profiles differ.
+- Applicable dataset-model panels: `80`
+- Applicable datasets: `12`

evaluation/query_family/missingness/strength_diagnostic/final/dataset_model_strength_scores.csv

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evaluation/query_family/missingness/strength_diagnostic/final/missing_strength_dataset_model_heatmap_appendix.pdf

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evaluation/query_family/missingness/strength_diagnostic/final/missing_strength_dataset_model_heatmap_appendix.tex

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+\textbf{Dataset-model strength heatmap}\\[0.5em]
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+\textbf{Strength minus profile}\\[0.5em]
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