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Resume SynthData0523 main/c6 batch 19

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  1. .gitattributes +31 -0
  2. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabdiff-c6-7636-20260420_063023.csv +3 -0
  3. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabdiff_train_meta.json +3 -0
  4. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/X_cat_test.npy +3 -0
  5. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/X_cat_train.npy +3 -0
  6. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/X_cat_val.npy +3 -0
  7. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/X_num_test.npy +3 -0
  8. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/X_num_train.npy +3 -0
  9. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/X_num_val.npy +3 -0
  10. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/info.json +3 -0
  11. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/real.csv +3 -0
  12. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/test.csv +3 -0
  13. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/val.csv +3 -0
  14. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/y_test.npy +3 -0
  15. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/y_train.npy +3 -0
  16. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/tabular_bundle/pipeline_ds/y_val.npy +3 -0
  17. SynthData0523/main/c6/tabdiff/tabdiff-c6-20260420_062412/train_20260420_062412.log +3 -0
  18. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/_tabpfgen_generate.py +87 -0
  19. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/gen_20260422_200031.log +3 -0
  20. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/input_snapshot.json +36 -0
  21. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/public_gate/normalized_schema_snapshot.json +169 -0
  22. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/public_gate/public_gate_report.json +37 -0
  23. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/public_gate/staged_input_manifest.json +174 -0
  24. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/runtime_result.json +15 -0
  25. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/public/staged_features.json +42 -0
  26. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/public/test.csv +3 -0
  27. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/public/train.csv +3 -0
  28. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/public/val.csv +3 -0
  29. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/tabpfgen/adapter_report.json +7 -0
  30. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/tabpfgen/adapter_transforms_applied.json +1 -0
  31. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/tabpfgen/model_input_manifest.json +176 -0
  32. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/tabpfgen-c6-7636-20260422_200031.csv +3 -0
  33. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/tabpfgen_meta.json +8 -0
  34. SynthData0523/main/c6/tabpfgen/tabpfgen-c6-20260422_200030/train_20260422_200031.log +3 -0
  35. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/_tabsyn_sample.py +39 -0
  36. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/_tabsyn_train.py +62 -0
  37. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/X_cat_test.npy +3 -0
  38. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/X_cat_train.npy +3 -0
  39. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/X_num_test.npy +3 -0
  40. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/X_num_train.npy +3 -0
  41. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/info.json +98 -0
  42. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/test.csv +3 -0
  43. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/train.csv +3 -0
  44. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/y_test.npy +3 -0
  45. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/data/tabsyn_c6/y_train.npy +3 -0
  46. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/gen_20260421_005324.log +3 -0
  47. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/input_snapshot.json +36 -0
  48. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/public_gate/normalized_schema_snapshot.json +169 -0
  49. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/public_gate/public_gate_report.json +37 -0
  50. SynthData0523/main/c6/tabsyn/tabsyn-c6-20260420_233446/public_gate/staged_input_manifest.json +174 -0
.gitattributes CHANGED
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1
+ import numpy as np
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+ import pandas as pd
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+ import json
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+ from tabpfgen import TabPFGen
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+
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+ df = pd.read_csv("/work/output-SpecializedModels/c6/tabpfgen/tabpfgen-c6-20260422_200030/staged/public/train.csv")
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+ target_col = "Type of Answer"
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+
9
+ feature_cols = [c for c in df.columns if c != target_col]
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+
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+ # --- Label-encode categorical / object columns ---
12
+ cat_encodings = {} # col -> list of unique values (index = code)
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+ for col in feature_cols:
14
+ if df[col].dtype == object or str(df[col].dtype) == 'category':
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+ cats = sorted(df[col].dropna().unique().tolist(), key=str)
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+ cat_map = {v: i for i, v in enumerate(cats)}
17
+ df[col] = df[col].map(cat_map).astype(float)
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+ cat_encodings[col] = cats
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+ print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
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+
21
+ # Encode target if categorical
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+ target_cats = None
23
+ if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
24
+ cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
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+ t_map = {v: i for i, v in enumerate(cats)}
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+ df[target_col] = df[target_col].map(t_map).astype(float)
27
+ target_cats = cats
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+ print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
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+
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+ X = df[feature_cols].values.astype(np.float32)
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+ y = df[target_col].values
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+ target_n = int(7636)
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+
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+ # Handle NaN
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+ for i in range(X.shape[1]):
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+ col_vals = X[:, i]
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+ mask = np.isnan(col_vals)
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+ if mask.any():
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+ mean_val = np.nanmean(col_vals)
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+ X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
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+
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+ gen = TabPFGen(
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+ n_sgld_steps=1000,
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+ sgld_step_size=0.01,
45
+ sgld_noise_scale=0.01,
46
+ device="auto",
47
+ )
48
+
49
+ print(f"[TabPFGen] Generating {target_n} rows via generate_classification")
50
+ X_syn, y_syn = gen.generate_classification(X, y, n_samples=target_n)
51
+
52
+ syn_df = pd.DataFrame(X_syn, columns=feature_cols)
53
+ syn_df[target_col] = y_syn
54
+
55
+ # --- Inverse label-encoding for categorical columns ---
56
+ for col, cats in cat_encodings.items():
57
+ # Round to nearest integer index, clamp to valid range
58
+ codes = np.round(syn_df[col].values).astype(int)
59
+ codes = np.clip(codes, 0, len(cats) - 1)
60
+ syn_df[col] = [cats[c] for c in codes]
61
+
62
+ if target_cats is not None:
63
+ codes = np.round(syn_df[target_col].values).astype(int)
64
+ codes = np.clip(codes, 0, len(target_cats) - 1)
65
+ syn_df[target_col] = [target_cats[c] for c in codes]
66
+
67
+ # Ensure output row count is strictly aligned with target_n.
68
+ if len(syn_df) > target_n:
69
+ print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
70
+ syn_df = syn_df.iloc[:target_n].copy()
71
+ elif len(syn_df) < target_n:
72
+ deficit = target_n - len(syn_df)
73
+ print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
74
+ if len(syn_df) > 0:
75
+ extra = syn_df.sample(n=deficit, replace=True, random_state=42)
76
+ syn_df = pd.concat([syn_df.reset_index(drop=True), extra.reset_index(drop=True)], ignore_index=True)
77
+ else:
78
+ # Defensive fallback: if generator returns empty, bootstrap from training rows.
79
+ syn_df = df[feature_cols + [target_col]].sample(
80
+ n=target_n, replace=True, random_state=42
81
+ ).reset_index(drop=True)
82
+
83
+ syn_df = syn_df[list(df.columns)]
84
+ if len(syn_df) != target_n:
85
+ raise RuntimeError(f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}")
86
+ syn_df.to_csv("/work/output-SpecializedModels/c6/tabpfgen/tabpfgen-c6-20260422_200030/tabpfgen-c6-7636-20260422_200031.csv", index=False)
87
+ print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-SpecializedModels/c6/tabpfgen/tabpfgen-c6-20260422_200030/tabpfgen-c6-7636-20260422_200031.csv")
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+ import os, sys, subprocess
2
+
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+ work_dir = "/work/output-SpecializedModels/c6/tabsyn/tabsyn-c6-20260420_233446"
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+ dataname = "tabsyn_c6"
5
+ output_csv = "/work/output-SpecializedModels/c6/tabsyn/tabsyn-c6-20260420_233446/tabsyn-c6-7636-20260421_005324.csv"
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+ tabsyn_root = "/workspace/tabsyn"
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+
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+ assert os.path.exists(tabsyn_root), f"TabSyn source not mounted: {tabsyn_root}"
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+
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+ old = os.environ.get("PYTHONPATH", "")
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+ os.environ["PYTHONPATH"] = tabsyn_root + (os.pathsep + old if old else "")
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+ sys.path.insert(0, tabsyn_root)
13
+
14
+ os.chdir(tabsyn_root)
15
+
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+ # Ensure data symlink exists
17
+ data_link = os.path.join(tabsyn_root, "data", dataname)
18
+ data_src = os.path.join(work_dir, "data", dataname)
19
+ os.makedirs(os.path.join(tabsyn_root, "data"), exist_ok=True)
20
+ if os.path.exists(data_link):
21
+ os.remove(data_link)
22
+ os.symlink(data_src, data_link)
23
+
24
+ print(f"[TabSyn] Sampling 7636 rows")
25
+ env = os.environ.copy()
26
+ env.setdefault("TABSYN_RESUME", "1")
27
+ ret = subprocess.run(
28
+ [sys.executable, "main.py",
29
+ "--dataname", dataname,
30
+ "--mode", "sample",
31
+ "--method", "tabsyn",
32
+ "--gpu", "0",
33
+ "--save_path", output_csv],
34
+ cwd=tabsyn_root,
35
+ env=env
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+ )
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+ if ret.returncode != 0:
38
+ sys.exit(ret.returncode)
39
+ print(f"[TabSyn] Saved -> {output_csv}")
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1
+ import os, sys, subprocess
2
+
3
+ work_dir = "/work/output-SpecializedModels/c6/tabsyn/tabsyn-c6-20260420_233446"
4
+ dataname = "tabsyn_c6"
5
+ tabsyn_root = "/workspace/tabsyn"
6
+
7
+ assert os.path.exists(tabsyn_root), f"TabSyn source not mounted: {tabsyn_root}"
8
+
9
+ old = os.environ.get("PYTHONPATH", "")
10
+ os.environ["PYTHONPATH"] = tabsyn_root + (os.pathsep + old if old else "")
11
+ sys.path.insert(0, tabsyn_root)
12
+
13
+ os.chdir(tabsyn_root)
14
+
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+ # Symlink data dir into TabSyn data/
16
+ data_link = os.path.join(tabsyn_root, "data", dataname)
17
+ data_src = os.path.join(work_dir, "data", dataname)
18
+ os.makedirs(os.path.join(tabsyn_root, "data"), exist_ok=True)
19
+ if os.path.exists(data_link):
20
+ os.remove(data_link)
21
+ os.symlink(data_src, data_link)
22
+
23
+ env = os.environ.copy()
24
+ env.setdefault("TABSYN_RESUME", "1")
25
+ _te = None
26
+ if _te is not None:
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+ env["TABSYN_VAE_EPOCHS"] = str(_te)
28
+ env["TABSYN_DIFFUSION_MAX_EPOCHS"] = str(max(_te + 1, 2))
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+
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+ # Data preprocessing is done on the host side (_prepare_data_dir)
31
+ # which creates .npy files, train/test CSVs, and info.json
32
+
33
+ # Step 1: Train VAE (produces latent embeddings)
34
+ print(f"[TabSyn] Step 1/2: Training VAE in {tabsyn_root}, dataname={dataname}")
35
+ ret = subprocess.run(
36
+ [sys.executable, "main.py",
37
+ "--dataname", dataname,
38
+ "--mode", "train",
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+ "--method", "vae",
40
+ "--gpu", "0"],
41
+ cwd=tabsyn_root,
42
+ env=env
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+ )
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+ if ret.returncode != 0:
45
+ print("[TabSyn] VAE training failed")
46
+ sys.exit(ret.returncode)
47
+
48
+ # Step 2: Train diffusion model on latent space
49
+ print(f"[TabSyn] Step 2/2: Training diffusion model")
50
+ ret = subprocess.run(
51
+ [sys.executable, "main.py",
52
+ "--dataname", dataname,
53
+ "--mode", "train",
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+ "--method", "tabsyn",
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+ "--gpu", "0"],
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+ cwd=tabsyn_root,
57
+ env=env
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+ )
59
+ if ret.returncode != 0:
60
+ print("[TabSyn] Diffusion training failed")
61
+ sys.exit(ret.returncode)
62
+ print("[TabSyn] Training complete (VAE + Diffusion)")
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+ ],
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