TabQueryBench commited on
Commit
53fded4
·
verified ·
1 Parent(s): f064c51

Add files using upload-large-folder tool

Browse files
Files changed (18) hide show
  1. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/_tabpfgen_generate.py +131 -0
  2. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/gen_20260510_071135.log +3 -0
  3. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/input_snapshot.json +3 -0
  4. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/public_gate/normalized_schema_snapshot.json +3 -0
  5. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/public_gate/public_gate_report.json +3 -0
  6. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/public_gate/staged_input_manifest.json +3 -0
  7. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/run_config.json +3 -0
  8. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/runtime_result.json +3 -0
  9. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/staged_features.json +3 -0
  10. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/test.csv +3 -0
  11. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/train.csv +3 -0
  12. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/val.csv +3 -0
  13. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/tabpfgen/adapter_report.json +3 -0
  14. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/tabpfgen/adapter_transforms_applied.json +3 -0
  15. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/tabpfgen/model_input_manifest.json +3 -0
  16. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/tabpfgen-c2-1382-20260510_071135.csv +3 -0
  17. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/tabpfgen_meta.json +3 -0
  18. syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/train_20260510_071135.log +3 -0
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/_tabpfgen_generate.py ADDED
@@ -0,0 +1,131 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import numpy as np
3
+ import pandas as pd
4
+ import json
5
+ from tabpfgen import TabPFGen
6
+
7
+ df = pd.read_csv("/work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/train.csv")
8
+ target_col = "class"
9
+
10
+ target_missing = df[target_col].isna()
11
+ if target_missing.any():
12
+ dropped = int(target_missing.sum())
13
+ df = df.loc[~target_missing].copy()
14
+ print(
15
+ f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
16
+ )
17
+ if df.empty:
18
+ raise ValueError(
19
+ f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
20
+ )
21
+
22
+ feature_cols = [c for c in df.columns if c != target_col]
23
+
24
+ cat_encodings = {}
25
+ for col in feature_cols:
26
+ if df[col].dtype == object or str(df[col].dtype) == 'category':
27
+ cats = sorted(df[col].dropna().unique().tolist(), key=str)
28
+ cat_map = {v: i for i, v in enumerate(cats)}
29
+ df[col] = df[col].map(cat_map).astype(float)
30
+ cat_encodings[col] = cats
31
+ print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
32
+
33
+ target_cats = None
34
+ if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
35
+ cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
36
+ t_map = {v: i for i, v in enumerate(cats)}
37
+ df[target_col] = df[target_col].map(t_map).astype(float)
38
+ target_cats = cats
39
+ print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
40
+
41
+ X = df[feature_cols].values.astype(np.float32)
42
+ y = df[target_col].values
43
+ fit_rows_cap = max(1, int(os.environ.get("TABPFGEN_FIT_MAX_ROWS", "50000")))
44
+ if len(X) > fit_rows_cap:
45
+ rng = np.random.default_rng(42)
46
+ idx = np.sort(rng.choice(len(X), size=fit_rows_cap, replace=False))
47
+ X = X[idx]
48
+ y = y[idx]
49
+ print(f"[TabPFGen] Downsampled fit rows -> {len(X)} (cap={fit_rows_cap})")
50
+ target_n = int(1382)
51
+
52
+ for i in range(X.shape[1]):
53
+ col_vals = X[:, i]
54
+ mask = np.isnan(col_vals)
55
+ if mask.any():
56
+ mean_val = np.nanmean(col_vals)
57
+ X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
58
+
59
+ chunk_rows = max(1, int(os.environ.get("TABPFGEN_GEN_CHUNK_ROWS", "256")))
60
+ device = (os.environ.get("TABPFGEN_DEVICE") or "auto").strip() or "auto"
61
+
62
+ n_sgld_steps = max(1, int(os.environ.get("TABPFGEN_N_SGLD_STEPS", "1000")))
63
+ sgld_step_size = float(os.environ.get("TABPFGEN_SGLD_STEP_SIZE", "0.01"))
64
+ sgld_noise_scale = float(os.environ.get("TABPFGEN_SGLD_NOISE_SCALE", "0.01"))
65
+
66
+ # TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
67
+ # (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
68
+ gen = TabPFGen(
69
+ n_sgld_steps=n_sgld_steps,
70
+ sgld_step_size=sgld_step_size,
71
+ sgld_noise_scale=sgld_noise_scale,
72
+ device=device,
73
+ )
74
+
75
+ print(
76
+ f"[TabPFGen] Generating {target_n} rows via generate_classification "
77
+ f"(chunk_rows={chunk_rows}, device={device}, "
78
+ f"n_sgld_steps={n_sgld_steps}, sgld_step_size={sgld_step_size}, "
79
+ f"sgld_noise_scale={sgld_noise_scale})"
80
+ )
81
+ x_parts = []
82
+ y_parts = []
83
+ remaining = target_n
84
+ while remaining > 0:
85
+ take = min(chunk_rows, remaining)
86
+ X_part, y_part = gen.generate_classification(X, y, n_samples=take)
87
+ x_parts.append(np.asarray(X_part))
88
+ y_parts.append(np.asarray(y_part))
89
+ remaining -= take
90
+ print(f"[TabPFGen] chunk done: take={take}, remaining={remaining}")
91
+
92
+ X_syn = np.concatenate(x_parts, axis=0)
93
+ y_syn = np.concatenate(y_parts, axis=0)
94
+
95
+ syn_df = pd.DataFrame(X_syn, columns=feature_cols)
96
+ syn_df[target_col] = y_syn
97
+
98
+ for col, cats in cat_encodings.items():
99
+ codes = np.round(syn_df[col].values).astype(int)
100
+ codes = np.clip(codes, 0, len(cats) - 1)
101
+ syn_df[col] = [cats[c] for c in codes]
102
+
103
+ if target_cats is not None:
104
+ codes = np.round(syn_df[target_col].values).astype(int)
105
+ codes = np.clip(codes, 0, len(target_cats) - 1)
106
+ syn_df[target_col] = [target_cats[c] for c in codes]
107
+
108
+ if len(syn_df) > target_n:
109
+ print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
110
+ syn_df = syn_df.iloc[:target_n].copy()
111
+ elif len(syn_df) < target_n:
112
+ deficit = target_n - len(syn_df)
113
+ print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
114
+ if len(syn_df) > 0:
115
+ extra = syn_df.sample(n=deficit, replace=True, random_state=42)
116
+ syn_df = pd.concat(
117
+ [syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
118
+ ignore_index=True,
119
+ )
120
+ else:
121
+ syn_df = df[feature_cols + [target_col]].sample(
122
+ n=target_n, replace=True, random_state=42
123
+ ).reset_index(drop=True)
124
+
125
+ syn_df = syn_df[list(df.columns)]
126
+ if len(syn_df) != target_n:
127
+ raise RuntimeError(
128
+ f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
129
+ )
130
+ syn_df.to_csv("/work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260510_071135/tabpfgen-c2-1382-20260510_071135.csv", index=False)
131
+ print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260510_071135/tabpfgen-c2-1382-20260510_071135.csv")
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/gen_20260510_071135.log ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5d311a5dc8b8f0acdaaac3ab4598756d9b420c132e6bd32f6e17f3ea56c9df53
3
+ size 4941
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/input_snapshot.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e348e38f04c3c1041d993b37fc998db9f8328874eca78bab60f77644edd5cb1a
3
+ size 1344
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/public_gate/normalized_schema_snapshot.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a63ea2091eccf0145444f670415e7201dbdd052bc2ddabdc4241f6f16bdcf0a0
3
+ size 3153
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/public_gate/public_gate_report.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bdc8c14ffce6055ca726f7949b2900c4ba619b670f8fc63c61328c24e4c46c66
3
+ size 912
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/public_gate/staged_input_manifest.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7a6e3e9a39e2894c4060df02109d07466b86dc3df9f568c21199514985e44d36
3
+ size 3969
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/run_config.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b69cc656ad881302d7d2913784c1f73fb414d22f650189198b6269793287216a
3
+ size 2169
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/runtime_result.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f38cf330a4eed99eae9b5ccebebb93d1addd9e1c10fd1dce8703f9d0a08830e4
3
+ size 887
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/staged_features.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:37511511f1d7cb0e004f9d7305c900644ebefe672c9a1a418c1f29b36786fabd
3
+ size 659
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/test.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b48114a7d0bc5bd9a07920f903c8d4aba8bf98bf2a66a050da03588b0245ca73
3
+ size 5273
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/train.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4aed00c2c2b3f88a55a7ebff31b2e1b5e0e32fb0a7267e0b9d2779cd23e434dd
3
+ size 41565
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/public/val.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:26e90c1170a57a14c05832ac88027722b1f3848f9662c7c09ef7c93dcba4cc01
3
+ size 5176
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/tabpfgen/adapter_report.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:eab7ec7c01d9a8f7aefd0c16df045a2cea642868929ee968c915dbacfa045a27
3
+ size 324
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/tabpfgen/adapter_transforms_applied.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
3
+ size 2
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/staged/tabpfgen/model_input_manifest.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:30d29a68e730a33907e786dce2531234ace60b810ed8915997cb41fa79bb9d12
3
+ size 4169
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/tabpfgen-c2-1382-20260510_071135.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5f18f6151907b27b2029da34f2027f0d6f7136c4fd61493bdfcda2fa2152d460
3
+ size 41729
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/tabpfgen_meta.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8756e278ebf1fc7a4b1619747c117742a54b16ca22d2a6ad89c0438a498d0142
3
+ size 444
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260510_071135/train_20260510_071135.log ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b29d0283349fc5dfa82814087163eeda7f66d044544475aed538484fff6a5b66
3
+ size 595