Add files using upload-large-folder tool
Browse files- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/_tabpfgen_generate.py +100 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/gen_20260429_061314.log +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/input_snapshot.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/public_gate/normalized_schema_snapshot.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/public_gate/public_gate_report.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/public_gate/staged_input_manifest.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/runtime_result.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/staged_features.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/test.csv +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/train.csv +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/val.csv +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/tabpfgen/adapter_report.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/tabpfgen/adapter_transforms_applied.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/tabpfgen/model_input_manifest.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/tabpfgen-c7-10368-20260429_061314.csv +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/tabpfgen_meta.json +3 -0
- syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/train_20260429_061314.log +3 -0
syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/_tabpfgen_generate.py
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import os
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import numpy as np
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import pandas as pd
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import json
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from tabpfgen import TabPFGen
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df = pd.read_csv("/work/output-Benchmark-trainonly-v1/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/train.csv")
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target_col = "class"
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target_missing = df[target_col].isna()
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if target_missing.any():
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dropped = int(target_missing.sum())
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df = df.loc[~target_missing].copy()
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print(
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f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
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)
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if df.empty:
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raise ValueError(
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f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
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)
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feature_cols = [c for c in df.columns if c != target_col]
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cat_encodings = {}
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for col in feature_cols:
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if df[col].dtype == object or str(df[col].dtype) == 'category':
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cats = sorted(df[col].dropna().unique().tolist(), key=str)
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cat_map = {v: i for i, v in enumerate(cats)}
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df[col] = df[col].map(cat_map).astype(float)
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cat_encodings[col] = cats
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print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
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target_cats = None
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if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
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cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
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t_map = {v: i for i, v in enumerate(cats)}
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df[target_col] = df[target_col].map(t_map).astype(float)
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target_cats = cats
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print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
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X = df[feature_cols].values.astype(np.float32)
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y = df[target_col].values
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target_n = int(10368)
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for i in range(X.shape[1]):
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col_vals = X[:, i]
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mask = np.isnan(col_vals)
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if mask.any():
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mean_val = np.nanmean(col_vals)
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X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
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# TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
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# (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
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gen = TabPFGen(
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n_sgld_steps=1000,
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sgld_step_size=0.01,
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sgld_noise_scale=0.01,
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device="auto",
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)
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print(f"[TabPFGen] Generating {target_n} rows via generate_classification")
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X_syn, y_syn = gen.generate_classification(X, y, n_samples=target_n)
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syn_df = pd.DataFrame(X_syn, columns=feature_cols)
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syn_df[target_col] = y_syn
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for col, cats in cat_encodings.items():
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codes = np.round(syn_df[col].values).astype(int)
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codes = np.clip(codes, 0, len(cats) - 1)
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syn_df[col] = [cats[c] for c in codes]
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if target_cats is not None:
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codes = np.round(syn_df[target_col].values).astype(int)
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codes = np.clip(codes, 0, len(target_cats) - 1)
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syn_df[target_col] = [target_cats[c] for c in codes]
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if len(syn_df) > target_n:
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print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
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syn_df = syn_df.iloc[:target_n].copy()
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elif len(syn_df) < target_n:
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deficit = target_n - len(syn_df)
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print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
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if len(syn_df) > 0:
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extra = syn_df.sample(n=deficit, replace=True, random_state=42)
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syn_df = pd.concat(
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[syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
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ignore_index=True,
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)
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else:
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syn_df = df[feature_cols + [target_col]].sample(
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n=target_n, replace=True, random_state=42
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).reset_index(drop=True)
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syn_df = syn_df[list(df.columns)]
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if len(syn_df) != target_n:
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raise RuntimeError(
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f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
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)
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syn_df.to_csv("/work/output-Benchmark-trainonly-v1/c7/tabpfgen/tabpfgen-c7-20260429_061314/tabpfgen-c7-10368-20260429_061314.csv", index=False)
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print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/c7/tabpfgen/tabpfgen-c7-20260429_061314/tabpfgen-c7-10368-20260429_061314.csv")
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/gen_20260429_061314.log
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version https://git-lfs.github.com/spec/v1
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oid sha256:50514dbd9cd064ed6754ea4b46fd82f7df79bcc7f0ff228dab81cdd9aeb3c8a6
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size 1267
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/input_snapshot.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:aa0d81821866bd2a65f0adb4ddec8deb4c25e14a6bc21dc30d08d7afb5c9cf02
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size 1349
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/public_gate/normalized_schema_snapshot.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:5dd68094a5d8fc40d291695c5aa12bc01cfe8d3a62848b4bcfd82c2e88ed19c9
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size 4177
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/public_gate/public_gate_report.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:f08566bcd78a9005059bf27f5f9ecf74954e2be289410d19100e900577f651ea
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size 912
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/public_gate/staged_input_manifest.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:c135182fd3cd06b55f916c855c9e1d86c2100b5101445e28f4c4628a13d03470
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size 4993
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/runtime_result.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:1268730fa043d04b0ff21f728477d1225e6ae74dab0f4ef9f5a7ea2d475dabb2
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size 597
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/staged_features.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:07596ae0689482090a05749dba332eca061d863cde5d8bf7a83e8c2c92abb330
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size 851
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/test.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:2042076337d5c37c6476e6bca2bd33cb5a171450c27894534ef50ac223256058
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size 106030
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/train.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:b37f6b2ef5257f40bd826ac956749881f0f474362bdb56e8c5728ad629242e3a
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size 847349
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/public/val.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:eff6dec27c3740661a1ae84dea391d690dfb60342bfd5d7527b903fdd6009780
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size 106192
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/tabpfgen/adapter_report.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:7b5bd12bc857c6e75bf8d52dfa9e9e5840b0dcd5ee456928d1c4372a81b3271a
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size 324
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/tabpfgen/adapter_transforms_applied.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
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size 2
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/staged/tabpfgen/model_input_manifest.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:31c864f09fbd8b3af09f5e07b7e47f014cb6a96ada0ea8726e122be18fdfe2d8
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size 5193
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/tabpfgen-c7-10368-20260429_061314.csv
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oid sha256:11bb6aee31a1bcbe969d798a8a69906cd73c17223291104079b93797d7cf94d0
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size 843881
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/tabpfgen_meta.json
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oid sha256:6d24b564dc79998c779f88388e7cb852959589d51fff04613dbb2fe1da220388
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size 445
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syntheticSuccess/c7/tabpfgen/tabpfgen-c7-20260429_061314/train_20260429_061314.log
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oid sha256:73ec563d826ab6396f832e3e1487289794c7c2a744680d747abf25ceb3611619
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size 595
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