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1 Parent(s): 8a6c968

Add cross-species perturbation inputs

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Files changed (4) hide show
  1. .gitattributes +2 -0
  2. d015/expression.h5ad +3 -0
  3. d016/expression.h5ad +3 -0
  4. datasets.yaml +18 -0
.gitattributes CHANGED
@@ -73,3 +73,5 @@ d010/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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  d011/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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  d012/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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  d014/expression.h5ad filter=lfs diff=lfs merge=lfs -text
 
 
 
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  d011/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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  d012/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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  d014/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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+ d015/expression.h5ad filter=lfs diff=lfs merge=lfs -text
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+ d016/expression.h5ad filter=lfs diff=lfs merge=lfs -text
d015/expression.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:e2c0f60714cb3ddd467eb460ea783620ab8c3335472392f1fc66f8dac80e7e43
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+ size 4879568
d016/expression.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:64b22e641ee217daf42cd8d379621cb2beee27d19d0008bff7a9393e81021a4d
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+ size 4294752
datasets.yaml CHANGED
@@ -86,3 +86,21 @@ datasets:
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  species: human
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  input_role: baseline
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  input_normalization: Linearized microarray expression
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  species: human
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  input_role: baseline
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  input_normalization: Linearized microarray expression
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+ - id: d015
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+ modality: bulk RNA
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+ path: d015/expression.h5ad
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+ n_samples: 55
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+ n_genes: 16162
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+ gene_id_type: ncbi_gene_id
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+ species: human
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+ input_role: baseline
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+ input_normalization: Species-specific FPKM; mouse genes mapped to human orthologs
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+ - id: d016
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+ modality: bulk RNA
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+ path: d016/expression.h5ad
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+ n_samples: 49
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+ n_genes: 15442
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+ gene_id_type: ncbi_gene_id
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+ species: human
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+ input_role: baseline
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+ input_normalization: Species-specific FPKM; mouse genes mapped to human orthologs