File size: 737 Bytes
5fcd10c | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | # Upload layout notes
This upload view is built from `dataset/bio_AlphaFold3_dataset` for ModelScope upload.
The full local source contains `public_databases/mmcif_files/` with about 195k files, which exceeds the ModelScope upload pre-check file-count limit. The upload view therefore does not include that expanded directory. It includes the upstream archive instead:
```text
data/public_databases/pdb_2022_09_28_mmcif_files.tar
```
Before running AlphaFold3 template search that requires `public_databases/mmcif_files`, extract the archive inside the dataset package:
```bash
cd data/public_databases
tar -xf pdb_2022_09_28_mmcif_files.tar
```
Other database directories are kept as linked source directories in the upload view.
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